Mercurial > repos > iuc > tooldistillator_summarize

diff test-data/flye/assembly.fasta @ 2:def7a82d23e1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit d7cada7ddf775e946e218fdc839e6e4c8aac6d80
author iuc
date Wed, 03 Jul 2024 12:07:36 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/flye/assembly.fasta	Wed Jul 03 12:07:36 2024 +0000
@@ -0,0 +1,127 @@
+>contig_1 
+AGTTTTTTGTGTGTTGTTTTATTGTTTTGCGTGGTTTGTTTTTATTGTTATTTCATTAAG
+GAAGGTAAATTCAGGATGGCAGTCTGTAGATAATCGGAGGTCACTTATGCTACATGATCA
+CGTGGCAGAATGTCTGGAGAAAAAGGACTGTACCGGAGAGCAGCTGAACGATGGGCAAAA
+GTGATGGTACAGCTAAGTGATGACCAGAAAGAAAAGTGGCGGCACAGAAACGAGCAGAGT
+GTTTGCGTAAGGCGCGCGGACTCCGGTTTCACCGGTGAACCTGACCGAAATAAAACAAGC
+GGTCAACAGACTACATTCTGAGTTGGGAATGGATTTGAAGAGCGGCGGGTATTCCGACGA
+TATAAAGGGACAGGAGAACAGAATACGTCCGGAAACGCGCGGTCAAAAAATGCTAAAAAT
+ATCTGAGAGAGTTATTGCCTGTTACCATAAGAAAAAGCGACTTTAGTGGTCGCTTTTGTG
+TCATATATAAGTCGTTTAAGTAAACCTGTCTGAACAGGTGCTCTGGTCGTGTTTGTCTTT
+GTTGGGTACAAATTGAGAATATTTTCATTAATTAATCTTCTTCTGCAGGCTTCAATAACC
+CACGCTGAAAAATTACCTGAACCTTTCAGGTCAAGAGCGATGTTAATTTGTTCAATTATC
+TGGTTTGGAAATCGGATGTTGCGGGTTGTTGTTCTGCGGGTTCTGTTCTTTGATGACATA
+ATGTTGCCCCGTATTCAGTGTTGCTGATTTGTATTATCTGAAGTTGCTTTTACGCTAATT
+TGATGCAGATCAATTAATACGATACCTGCGTAATAATTGATTATTTCTCGTGGTTTGATG
+GCGTACACATGTCGTGATAAACCTCATGTAGATGATAATTATTATCATTTTCGTGGGTCC
+TTTCCGGCGATCCGACAGGTTACGGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAA
+TTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTTTTATTTAAAATA
+CCCCTGAAAGAAAGGAAACGACAGGTGCTGAAAACGGGCTTTTGGCCTCTGTCGTTTCCT
+TTCTCTGTTTTGTCCGTGGAATGAACAATGGAAGTCAACAAAAGCAGCTGGCTGACATTT
+TCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGAATGCCCGTTCTGCGAGG
+CGGTGGCAAGGGTAATGAGGTGCTTTATGATTCTGCCGCCGTCATAAAATGGTATGCCGA
+AAGGGATGCTGAAATTGAGAACGAAAGCTGCGCCGGGAAGTTGAAGAACTGCGGCAGGCC
+AGCGAGACAGATCTCCAGCCGGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCG
+CAGGCCGACGCACAGGAGCTGAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCAT
+TCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCC
+CCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACG
+GGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCT
+GAGTGAATATATCGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTC
+GCTCACTGTTCAGGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCCAGTTACTATC
+TCCCGAAAGAATCCGCATACCGTGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCA
+TCATGAATGCGATGGGCAGCGACTACATCCGCGAGGTGAATGTGGTGAAGTCTGCCCGTG
+TTGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTCATAGAGCATAAGCAGCGCA
+ACACACTTATCTGGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCACGTTG
+AGCCGACCATCCGCGATATTCCGTCGCTGCTGGCGCTGGCTCCGTGGTATGGCAAAAGCA
+CCGGGATAACACGCTCACTATGAAGCGTTTTTCCAATGGTCGTGGCTTCTGGTGCCCGGG
+CGGTAAAGCGGCAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGGTTATGATGAACTT
+GCTGCCTTTGATGAGGATATTGAACAGGAAGGCTCTCCGACGTTCTCGGGCGATAAGCGT
+ATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACGCCCAAAGTGAGAGCACCT
+GCCAGATTGAGCGTGCAGCCAGTGAATCCCGCATTTTATGCGTTTTCATGTTGCCTGCCC
+GCACTGCGGGAGGAGCAGTATCTTAAATTTGGCGACAAAGAGACGCCGTTTGGCCTCAAA
+TGGACGCCGGATGACCCTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCC
+GCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGA
+CCCGTGATGGCATTCTCTGGTTTCGTCATCCGGTGAAGAGATTGAACCGCCTGACAGTGT
+GACCTTTCACATCTGGACGGCGTACAGCCCGTTCACCACGGGTGCAGATTGTCAAAGACT
+GGATGAAGACGAAAGGGATACGGGAAAACGTAAAACCTTCGTGAACACCACGCTCGGTGA
+GACGTGGGAAGCGAAAATCGGCGAACGTCCGGATGCTGAGGTGATGGCGGAGCGGAAGAG
+TATTATTCAGCGCCCGTTCCTGATCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAG
+CTGGACCGCTACGAAATGCGCGTATGGGGATGGGGGCCGGGTGAGAAAGCTGGCTGATTG
+ACCGGCAGATTATTATGGGCCGCCACGACGATGAACAGACGCTGCTGCGTGGATGAGGCC
+ATCAATAAAACCTATACCCGCCGGAATGGTGCAGAAATGTCGGTATCCCGTATCTGCTGG
+GATACTGGCGGGATTGACCCGACCATTGTGTATGAACGCTCGAAAAACATGGGCTGTTCC
+GGGTGATCCCATTAAAGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCACGTAAG
+CGAAACAAAACGGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTA
+TAACCGCTTCACACTGACGCCGGAAGGGATGAACCGCTTCCGGTGCCGTTCACTTCCGAA
+TAACCCGGATATTTTGATCTTACCGAAGCGCAGCAACTGACTGCTGAAGAGCAGGTCGAA
+AAATGGGTGGATGGCAGGAAAAAATACTGTGGGACAGCAAAAGCGACGCAATGAGGCGCT
+CGACTGCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCGCTGGCAGCTGGAT
+CTCAGTGCACTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAACCAACAAGAAAACA
+CTGGCAGAATACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCGACAGGAAGAACTTG
+CCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGAAAACGGGTGGCAACGGTACAGA
+AAGACGGACGGCGAGTGGGTTTACGACCACTTCCGTGTCTGACCTGAAAAATACATTGCT
+GAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCAGCAGGATTTTATGTA
+TGAAAATGTCCACCATTCCCACCCTTCTGGGGCCGGACGGCATGACATCGCTGCGTGAAT
+ATGCCGGTTATCACGGCGGTGGCAGCGGATTTGGTGGGCAGTTGCGGGCGTGGAACCCAC
+CGGGTGAAAGTGTGGATGCAGCCCTGCTGCCCAACTTTACCCGTGGCAATGCCCGCGCAG
+ACGATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAGTTGCATCAGGATCATA
+TCGTCGGGTCTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGCTATCTGGGCATCGGGGA
+GGAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGGAAAGAGTTTGCCGAAGA
+TGACTGTTGCTGCATTGACGTTGAGCGAAACGCACGTTTACCATGATGATTCGGGAAGGT
+GTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACGGGATACCCGTCCTCG
+CGACTGTTCCGGACACAGTTCCGGATGGTCAGCCCAAGCGCATCAGCAACCCGAACAATA
+CCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGTGCGGCGCTGG
+GATATTACGTCAGCGAGGACGGGTATCCGGCTGGATGCCGCAGAAATGGACATGGATACC
+CGCGAGTTACCCGGCGGTCGTGCTTCGTTCATTCACGTCTTTGAACCCGTGGAGGACGGG
+CAGACCCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTCGACACG
+CTGCAGAACACGCAGCTGCAGAACGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAG
+AGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAG
+CGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCACCGGTCC
+GTCTGGGAGGCGCAAAGTGCCGCACCTGATGCCGGGGACTCACTGAACCTGCAGACGGCT
+CAGGACACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTGCGGTATATCGCTGCC
+GGGCTGGGTGTCTCGTATGAGCAGCTTTCCGGAATTACGCCCAGATGAGCTACTCCACGG
+CACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGGCGAAAATTCGTCGCAT
+CCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCCATCGTTCGCCGCGTGG
+TGACGTTACCTTCAAAAGCGCGCTTCAGCTTTCAGGAAGCCCGCAGTGCTCGGGGAACTG
+CGACTGGATAAGCTCGGTCGTATGGCCATCGATGGTCTGAAGAAGTTCAGGAAGCGGTGA
+TGCTGATAGAAGCCGGACTGAGCACCTACGAGAAAGTGCGCGAAACGCGGTGACGACTAT
+CAGGAAATTTTGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGCGCAGCTGGTCTTAAAC
+CGCCCGCACGGGCGGCTGCGGCATTGAATCCGGGCTGCGACAATCAACAGAGGAGGAGAA
+GAGTGACAGCAGAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCTTTTAATGAGCCGC
+TGATGCTTGAACCCGCCTATGCGCGGGTTTTCTTTGTGCGCTTGCAGGCCAGCTTGGGAT
+CAGCCGCCTGACGGATGCAGTATCCGGCGACAGCCTGACTGCCGGAGAGGCACCCGCGGC
+GCTGGCGTTATCCGGTGATGATGACGGACCACGACAGGCCCGGAGTTATCAGGTCATGAA
+CGGCATCGCCGTGCTGCCGGTGTCCGGTACGCTGGTCAGCCGGACGCGGGCGCTGCAGCC
+GTATTCGGGAATGACCGGTTACAACGGCATTATCGCCCGTCTGCAACAGGCTGCCAGCGA
+TCCGATGGTGGACGGCATTCTGCTCGATATGGACACACCGGGCGGGATGGTGGCGGGAGC
+ATTTGACTGTGCTGACATCATCGCCCGTGTGCGAGACATCAAACCGGTATGGGCGCTGGC
+CAACGACATGAACTGCAGTGCAGGTCAGCTGCTTGCCAGCGCCGCCTCCCGGCGTCTGGT
+CACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACAGTAATTACGGTGC
+TGCCTCGGAGAAACAGGGCGTGAAATCACGCTGATTTACAGCGGCAGCCATAAGGTGGAT
+GGCAACCCTACAGCCATCTACCGGGTGATGTCCGGAAACACTGCAGTCCCGGATGGATGC
+AACCCGCCGGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCCTGTCCGTGCAGGCTGT
+GCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTGATGCCGGACTGGCTGA
+TGAACTTGTCAACAGCACCGATGCGATCACCGTTATGCGTGATGCACTGGATGCACGTAA
+ATCCGTCTCTCAGGAGGGCGAATGACCAAAGAGACTCAATCAACAACTGTTTCAGCCACT
+GCTTCGCAGGCTGACGTTACTGGCGTGGTGCCAGCGACGGAGGGCGAAAACGCCAGCGCG
+GCGCAGCCGGACGTGAACGCGCAGATCACCGCTGCGGTTGCGGCAGAAAACAGCCGCATT
+ATGGGGATCCTCAACTGTGAGGAGGCTCACGGACGCGAAGAACAGGCCCGCGTGCTGGCA
+GAAACCCCGGTATGACCGTGGAAACGGCCCGCCGCATTCTGGCCGCAGCACCACAGAGTG
+CACAGGCGCGCAGTGATACTGCGCTGGATCGTCTGATGCAGGGGCACCGGCACCGCTGGC
+TGCAGGTAACCGGCATCTGATGCCGTTAACGATTTGCTGAACACACCAGTGTAAGGGATG
+TTTATGACGAGCAAAGAAACCTTTACCCATTACCAGCCGCTGGGCAACAGTGACCCGGCT
+CATACCGCAACCGCGCCCGGCGGATTGAGTGCGAAAGCGTCTGCAATGACCCCGCTGATG
+CTGGACACCGCCACCCGTAAGCTGGTTGCGTGGGATGGCACCACCGACGG
+>contig_2
+CCATGGTGTAATCACCAATATTTTTCATTTTATCAACGGGTTTAGTTGATTAGTTGTAGT
+ACCTGTACCGCTCAGATAAGTAGCTGTCCAGTTAGTCATTCTTGTTAGGTTAAATCCTAT
+CAGTTTTAAGATTGCTGATTGAGGATCTTGAGTATTAGATGCCCGTATTCACTGGCTGAG
+GTGGCTGTTCCCAGTGCAGGTGTATATGGTGAGTTTTGCAACTGTGCACGGTAAGCTCCT
+TTTACTTCCTTCAGAATTCAGTATCCCTGCTTCGCCCTGCGATGAAACTCCACTCACAGT
+GGGGCACGGTCGGCCAGTTCTGCCAGTCGCTGGTTGGCAGTGGCAAAGGTCTGGTACCGA
+GCCCCGAGGCAACCCAGCCGTAGGTGGTCAGGTAGGATTTCAGCTGCTCCTGCGCTCAGT
+TTCTGCGTTATCTGTTGGCAACGCCTTCTGCACCGTTTCTTCATACCTGTTGGCAGCCTT
+CTGAATACGGCTTTCAATATCCGGCAGGTTGCCGTTACCCGTGTCGCGTCGGGTCCGGTA
+CGCTGACACAAATTCCTGTGCTGCGCTGTCCGGTCACGGAGCATGGTATCCATGGCGGAG
+CGTTGTGCCGTCAGGACACCCTGATACTCCGTTTCAATGAAGGGATTGAAAAAATAGTCC
+AGTGCGGACTGGTTGTTGCTGCCATTCCTTTCACGGTGAGACTCACACTCCCGCAGGTGG