Mercurial > repos > iuc > transdecoder
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 2147ee46c226f99d16899eb29b223f0f80db5491"
| author | iuc |
|---|---|
| date | Fri, 22 Oct 2021 11:15:03 +0000 |
| parents | d0d4cef4f967 |
| children |
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# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- Fe-ADH PF00465.18 364 CUFF.50.1.p1 - 423 8.2e-127 415.8 1.9 1 1 1.6e-128 9.4e-127 415.6 1.9 1 364 52 414 52 414 0.96 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.5 250 CUFF.50.1.p1 - 423 9e-23 74.1 4.0 1 2 4.9e-22 2.9e-20 65.9 2.6 2 245 57 320 56 323 0.89 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.5 250 CUFF.50.1.p1 - 423 9e-23 74.1 4.0 2 2 0.8 47 -3.6 0.0 27 60 355 388 350 399 0.70 Iron-containing alcohol dehydrogenase Pantoate_ligase PF02569.14 266 CUFF.50.1.p2 - 284 1.6e-104 341.7 0.0 1 1 4.4e-106 1.7e-104 341.6 0.0 4 265 5 278 2 279 0.91 Pantoate-beta-alanine ligase FAD_syn PF06574.11 158 CUFF.50.1.p2 - 284 0.00024 14.0 0.0 1 2 2e-05 0.00081 12.2 0.0 18 82 33 92 22 109 0.84 FAD synthetase FAD_syn PF06574.11 158 CUFF.50.1.p2 - 284 0.00024 14.0 0.0 2 2 0.31 12 -1.4 0.0 112 145 141 174 125 188 0.77 FAD synthetase CTP_transf_like PF01467.25 143 CUFF.50.1.p2 - 284 0.00046 13.3 0.0 1 1 2.2e-05 0.00086 12.4 0.0 9 43 33 66 29 73 0.88 Cytidylyltransferase-like Pantoate_transf PF02548.14 259 CUFF.50.1.p3 - 268 1.5e-104 341.9 0.0 1 1 2.8e-106 1.7e-104 341.7 0.0 2 258 6 261 5 262 0.99 Ketopantoate hydroxymethyltransferase Asp_Glu_race PF01177.21 224 CUFF.50.1.p3 - 268 4.5e-06 19.6 0.0 1 1 1.4e-07 8.5e-06 18.6 0.0 49 98 157 205 141 212 0.87 Asp/Glu/Hydantoin racemase Chitin_synth_1 PF01644.16 163 CUFF.60.2.p1 - 844 2.4e-83 270.9 0.2 1 1 2.1e-84 4.2e-83 270.1 0.2 1 163 196 358 196 358 1.00 Chitin synthase Chitin_synth_1N PF08407.10 73 CUFF.60.2.p1 - 844 6.2e-29 92.8 0.1 1 1 7.6e-30 1.5e-28 91.6 0.1 2 73 124 195 123 195 0.96 Chitin synthase N-terminal Chitin_synth_2 PF03142.14 527 CUFF.60.2.p1 - 844 5.4e-24 77.5 9.9 1 4 1 20 -3.5 0.0 27 49 190 212 180 222 0.78 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.2.p1 - 844 5.4e-24 77.5 9.9 2 4 0.81 16 -3.2 0.0 236 264 242 270 225 278 0.78 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.2.p1 - 844 5.4e-24 77.5 9.9 3 4 1.7e-22 3.4e-21 68.3 0.0 203 433 335 576 320 600 0.76 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.2.p1 - 844 5.4e-24 77.5 9.9 4 4 1.7e-05 0.00033 12.2 3.7 434 491 665 722 612 732 0.87 Chitin synthase Glyco_trans_2_3 PF13632.5 197 CUFF.60.2.p1 - 844 3.4e-11 36.3 7.3 1 1 9.7e-12 1.9e-10 33.9 7.3 3 191 338 564 336 713 0.80 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.5 230 CUFF.60.2.p1 - 844 0.00015 14.6 0.0 1 2 0.58 11 -1.4 0.0 90 110 237 257 197 265 0.73 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.5 230 CUFF.60.2.p1 - 844 0.00015 14.6 0.0 2 2 2.9e-05 0.00056 12.7 0.0 83 229 329 507 309 508 0.89 Glycosyltransferase like family 2 MVP_shoulder PF11978.7 118 CUFF.60.2.p1 - 844 0.00071 12.5 0.0 1 1 0.00011 0.0022 11.0 0.0 40 100 65 124 55 134 0.84 Shoulder domain GHMP_kinases_N PF00288.25 66 CUFF.60.2.p2 - 405 1.3e-17 56.7 4.8 1 2 0.22 6.5 0.1 0.1 19 40 25 47 22 57 0.68 GHMP kinases N terminal domain GHMP_kinases_N PF00288.25 66 CUFF.60.2.p2 - 405 1.3e-17 56.7 4.8 2 2 4.6e-19 1.4e-17 56.7 1.6 2 66 126 203 125 203 0.87 GHMP kinases N terminal domain GHMP_kinases_C PF08544.12 85 CUFF.60.2.p2 - 405 2.3e-08 27.3 0.0 1 1 2.6e-09 7.7e-08 25.6 0.0 8 66 284 338 272 349 0.90 GHMP kinases C terminal GalKase_gal_bdg PF10509.8 49 CUFF.60.2.p2 - 405 0.00016 14.2 0.0 1 1 1e-05 0.0003 13.3 0.0 12 44 5 37 2 41 0.90 Galactokinase galactose-binding signature FPP PF05911.10 866 CUFF.60.2.p2 - 405 0.0011 10.2 0.1 1 1 5.3e-05 0.0016 9.6 0.1 518 597 222 301 197 316 0.76 Filament-like plant protein, long coiled-coil Chitin_synth_1 PF01644.16 163 CUFF.60.1.p1 - 844 2.4e-83 270.9 0.2 1 1 2.1e-84 4.2e-83 270.1 0.2 1 163 196 358 196 358 1.00 Chitin synthase Chitin_synth_1N PF08407.10 73 CUFF.60.1.p1 - 844 6.2e-29 92.8 0.1 1 1 7.6e-30 1.5e-28 91.6 0.1 2 73 124 195 123 195 0.96 Chitin synthase N-terminal Chitin_synth_2 PF03142.14 527 CUFF.60.1.p1 - 844 5.4e-24 77.5 9.9 1 4 1 20 -3.5 0.0 27 49 190 212 180 222 0.78 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.1.p1 - 844 5.4e-24 77.5 9.9 2 4 0.81 16 -3.2 0.0 236 264 242 270 225 278 0.78 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.1.p1 - 844 5.4e-24 77.5 9.9 3 4 1.7e-22 3.4e-21 68.3 0.0 203 433 335 576 320 600 0.76 Chitin synthase Chitin_synth_2 PF03142.14 527 CUFF.60.1.p1 - 844 5.4e-24 77.5 9.9 4 4 1.7e-05 0.00033 12.2 3.7 434 491 665 722 612 732 0.87 Chitin synthase Glyco_trans_2_3 PF13632.5 197 CUFF.60.1.p1 - 844 3.4e-11 36.3 7.3 1 1 9.7e-12 1.9e-10 33.9 7.3 3 191 338 564 336 713 0.80 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.5 230 CUFF.60.1.p1 - 844 0.00015 14.6 0.0 1 2 0.58 11 -1.4 0.0 90 110 237 257 197 265 0.73 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.5 230 CUFF.60.1.p1 - 844 0.00015 14.6 0.0 2 2 2.9e-05 0.00056 12.7 0.0 83 229 329 507 309 508 0.89 Glycosyltransferase like family 2 MVP_shoulder PF11978.7 118 CUFF.60.1.p1 - 844 0.00071 12.5 0.0 1 1 0.00011 0.0022 11.0 0.0 40 100 65 124 55 134 0.84 Shoulder domain GHMP_kinases_N PF00288.25 66 CUFF.60.1.p2 - 354 5.2e-18 58.0 1.6 1 1 2.7e-19 1.1e-17 57.0 1.6 2 66 75 152 74 152 0.87 GHMP kinases N terminal domain GHMP_kinases_C PF08544.12 85 CUFF.60.1.p2 - 354 1.8e-08 27.7 0.0 1 1 1.6e-09 6.2e-08 25.9 0.0 8 66 233 287 221 298 0.90 GHMP kinases C terminal FPP PF05911.10 866 CUFF.60.1.p2 - 354 0.00084 10.5 0.1 1 1 3.1e-05 0.0012 9.9 0.1 518 597 171 250 146 265 0.76 Filament-like plant protein, long coiled-coil DUF1989 PF09347.9 167 CUFF.34.1.p1 - 303 1.9e-57 186.4 0.0 1 1 2.1e-59 2.5e-57 186.1 0.0 2 167 58 231 57 231 0.98 Domain of unknown function (DUF1989) Acetyltransf_10 PF13673.6 127 CUFF.34.1.p2 - 146 2.1e-20 65.9 0.0 1 1 1.9e-21 2.4e-20 65.7 0.0 32 123 50 146 28 146 0.90 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.24 117 CUFF.34.1.p2 - 146 5.9e-15 48.5 0.0 1 1 5.3e-16 6.9e-15 48.3 0.0 18 117 35 129 16 129 0.77 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.6 76 CUFF.34.1.p2 - 146 5.2e-13 42.3 0.0 1 1 5.3e-14 7e-13 41.8 0.0 5 76 29 131 25 131 0.68 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.6 128 CUFF.34.1.p2 - 146 2.8e-07 23.6 0.0 1 1 7.9e-08 1e-06 21.8 0.0 72 127 72 131 11 132 0.71 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.5 101 CUFF.34.1.p2 - 146 5.3e-07 23.3 0.0 1 1 9e-08 1.2e-06 22.2 0.0 1 82 25 102 25 123 0.81 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.4 210 CUFF.34.1.p2 - 146 5.8e-06 18.8 0.1 1 1 1.2e-06 1.5e-05 17.4 0.1 28 145 5 140 1 146 0.81 Putative acetyl-transferase FR47 PF08445.9 86 CUFF.34.1.p2 - 146 7.7e-06 18.8 0.0 1 1 8.5e-07 1.1e-05 18.3 0.0 18 81 70 133 53 137 0.85 FR47-like protein Acetyltransf_CG PF14542.5 80 CUFF.34.1.p2 - 146 1.5e-05 18.0 0.0 1 1 2.2e-06 2.8e-05 17.2 0.0 8 56 57 105 50 108 0.87 GCN5-related N-acetyl-transferase GNAT_acetyltr_2 PF13718.5 227 CUFF.34.1.p2 - 146 0.00038 12.8 0.0 1 1 3.9e-05 0.00051 12.4 0.0 94 131 72 109 67 128 0.78 GNAT acetyltransferase 2 Fungal_trans PF04082.17 267 CUFF.41.1.p1 - 326 2e-42 137.9 0.2 1 1 2.3e-44 2.8e-42 137.5 0.2 1 200 120 311 120 324 0.93 Fungal specific transcription factor domain REPA_OB_2 PF16900.4 98 CUFF.41.1.p2 - 295 0.0006 12.7 0.0 1 1 9e-06 0.0011 11.9 0.0 50 96 143 196 134 198 0.81 Replication protein A OB domain Na_H_Exchanger PF00999.20 381 CUFF.13.2.p1 - 291 1.3e-42 138.8 8.5 1 1 2.8e-44 1.6e-42 138.5 8.5 1 198 83 291 83 291 0.97 Sodium/hydrogen exchanger family PsbN PF02468.14 43 CUFF.13.2.p1 - 291 0.00026 13.8 0.0 1 1 1.6e-05 0.00093 12.0 0.0 27 43 118 136 107 136 0.84 Photosystem II reaction centre N protein (psbN) Na_H_Exchanger PF00999.20 381 CUFF.13.1.p2 - 119 4.6e-27 87.6 2.1 1 1 4.3e-29 5.1e-27 87.5 2.1 82 198 1 119 1 119 0.97 Sodium/hydrogen exchanger family Na_H_Exchanger PF00999.20 381 CUFF.13.3.p1 - 194 1e-15 50.3 1.9 1 1 2.4e-17 1.4e-15 49.8 1.9 1 93 83 184 83 185 0.96 Sodium/hydrogen exchanger family PsbN PF02468.14 43 CUFF.13.3.p1 - 194 0.00018 14.3 0.0 1 1 9e-06 0.00053 12.8 0.0 27 43 118 136 106 136 0.85 Photosystem II reaction centre N protein (psbN) GLEYA PF10528.8 91 CUFF.11.1.p1 - 294 2.9e-20 65.5 3.2 1 2 1.8 1.1e+02 -3.6 0.0 70 84 13 27 3 33 0.60 GLEYA domain GLEYA PF10528.8 91 CUFF.11.1.p1 - 294 2.9e-20 65.5 3.2 2 2 6.1e-22 3.6e-20 65.2 2.1 2 90 157 253 156 254 0.92 GLEYA domain Orthopox_A5L PF06193.10 271 CUFF.11.1.p1 - 294 0.0072 8.6 4.9 1 1 0.00017 0.0099 8.2 4.9 146 192 3 49 1 92 0.77 Orthopoxvirus A5L protein-like DUF2868 PF11067.7 328 CUFF.9.1.p1 - 156 0.0008 11.7 0.3 1 1 1.1e-05 0.0013 11.1 0.3 47 74 97 123 92 126 0.94 Protein of unknown function (DUF2868) Fungal_trans PF04082.17 267 CUFF.38.1.p1 - 638 5.1e-28 90.7 6.2 1 2 9.6e-29 5.6e-27 87.3 5.9 3 234 203 429 201 459 0.81 Fungal specific transcription factor domain Fungal_trans PF04082.17 267 CUFF.38.1.p1 - 638 5.1e-28 90.7 6.2 2 2 0.017 1 1.2 0.0 1 23 471 492 471 504 0.87 Fungal specific transcription factor domain Zn_clus PF00172.17 40 CUFF.38.1.p1 - 638 9.2e-10 31.5 13.0 1 1 2.6e-11 1.5e-09 30.8 13.0 1 39 5 42 5 44 0.91 Fungal Zn(2)-Cys(6) binuclear cluster domain AA_permease_2 PF13520.5 425 CUFF.38.1.p2 - 551 2.5e-56 184.1 57.6 1 1 5.4e-58 3.2e-56 183.8 57.6 1 425 48 491 48 491 0.85 Amino acid permease AA_permease PF00324.20 479 CUFF.38.1.p2 - 551 6.8e-25 80.4 51.2 1 1 1.5e-26 9.1e-25 80.0 51.2 19 463 70 500 53 509 0.76 Amino acid permease MatE PF01554.17 161 CUFF.38.1.p3 - 456 1.1e-63 206.6 23.8 1 2 1.6e-39 9.2e-38 122.3 4.7 1 161 17 177 17 177 0.99 MatE MatE PF01554.17 161 CUFF.38.1.p3 - 456 1.1e-63 206.6 23.8 2 2 1.5e-29 8.6e-28 89.9 11.1 4 159 240 396 239 398 0.98 MatE Polysacc_synt_C PF14667.5 142 CUFF.38.1.p3 - 456 2.1e-09 30.5 3.6 1 4 0.34 20 -1.8 1.1 13 26 51 64 18 109 0.61 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.38.1.p3 - 456 2.1e-09 30.5 3.6 2 4 3.5e-11 2.1e-09 30.5 3.6 2 115 131 252 130 273 0.79 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.38.1.p3 - 456 2.1e-09 30.5 3.6 3 4 0.14 8.5 -0.6 2.6 109 136 295 326 266 332 0.55 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.38.1.p3 - 456 2.1e-09 30.5 3.6 4 4 0.0013 0.075 6.0 5.5 4 79 353 430 343 444 0.76 Polysaccharide biosynthesis C-terminal domain Arginase PF00491.20 280 CUFF.38.1.p4 - 374 3.6e-91 298.4 0.0 1 1 7.1e-93 4.2e-91 298.2 0.0 2 277 75 373 74 374 0.93 Arginase family UPF0489 PF12640.6 178 CUFF.38.1.p4 - 374 0.00079 12.6 0.0 1 1 2.1e-05 0.0012 12.0 0.0 7 43 186 229 183 270 0.67 UPF0489 domain RNA_POL_M_15KD PF02150.15 36 CUFF.7.1.p1 - 134 5.2e-05 16.1 0.0 1 2 4.5e-05 0.0053 9.6 0.0 19 33 56 70 53 72 0.78 RNA polymerases M/15 Kd subunit RNA_POL_M_15KD PF02150.15 36 CUFF.7.1.p1 - 134 5.2e-05 16.1 0.0 2 2 0.0026 0.3 4.0 0.0 8 24 112 128 109 130 0.87 RNA polymerases M/15 Kd subunit Amidohydro_1 PF01979.19 344 CUFF.27.1.p1 - 464 5.6e-82 268.6 0.4 1 1 1.1e-83 6.7e-82 268.4 0.4 1 343 57 422 57 423 0.96 Amidohydrolase family Amidohydro_3 PF07969.10 473 CUFF.27.1.p1 - 464 4.5e-17 55.5 0.1 1 2 4.9e-05 0.0029 10.0 0.1 5 25 53 73 52 84 0.86 Amidohydrolase family Amidohydro_3 PF07969.10 473 CUFF.27.1.p1 - 464 4.5e-17 55.5 0.1 2 2 3.4e-15 2e-13 43.4 0.0 265 472 213 423 165 424 0.75 Amidohydrolase family SAUGI PF06106.10 111 CUFF.27.1.p2 - 121 0.00079 12.5 0.8 1 2 0.001 0.12 5.5 0.1 66 92 12 38 3 50 0.79 S. aureus uracil DNA glycosylase inhibitor SAUGI PF06106.10 111 CUFF.27.1.p2 - 121 0.00079 12.5 0.8 2 2 0.00065 0.077 6.1 0.1 57 90 64 98 46 105 0.77 S. aureus uracil DNA glycosylase inhibitor SnoaL_2 PF12680.6 102 CUFF.36.1.p1 - 131 8.3e-12 38.7 0.0 1 1 1.7e-13 1e-11 38.4 0.0 2 100 10 108 9 110 0.92 SnoaL-like domain SnoaL PF07366.11 126 CUFF.36.1.p1 - 131 7.1e-08 25.3 0.2 1 2 0.0013 0.077 5.8 0.0 45 64 7 26 3 28 0.89 SnoaL-like polyketide cyclase SnoaL PF07366.11 126 CUFF.36.1.p1 - 131 7.1e-08 25.3 0.2 2 2 8.6e-09 5.1e-07 22.5 0.1 5 110 14 107 9 114 0.90 SnoaL-like polyketide cyclase malic PF00390.18 182 CUFF.1.1.p1 - 122 2.2e-20 66.1 0.0 1 1 2.5e-22 3e-20 65.7 0.0 3 76 32 108 30 110 0.95 Malic enzyme, N-terminal domain GDC-P PF02347.15 430 CUFF.57.1.p1 - 1032 4.2e-215 707.3 0.0 1 3 3.4e-204 2e-202 665.5 0.0 2 430 66 504 65 504 0.99 Glycine cleavage system P-protein GDC-P PF02347.15 430 CUFF.57.1.p1 - 1032 4.2e-215 707.3 0.0 2 3 2.5e-13 1.4e-11 36.7 0.0 22 285 529 810 525 822 0.77 Glycine cleavage system P-protein GDC-P PF02347.15 430 CUFF.57.1.p1 - 1032 4.2e-215 707.3 0.0 3 3 0.02 1.2 0.7 0.0 332 373 840 881 836 926 0.78 Glycine cleavage system P-protein Beta_elim_lyase PF01212.20 293 CUFF.57.1.p1 - 1032 2.7e-06 19.7 0.0 1 1 8.8e-08 5.2e-06 18.8 0.0 29 201 619 786 611 886 0.76 Beta-eliminating lyase DJ-1_PfpI PF01965.23 165 CUFF.47.1.p1 - 199 3.7e-15 49.0 0.0 1 1 9.5e-17 5.6e-15 48.4 0.0 12 111 51 172 47 198 0.78 DJ-1/PfpI family ThiJ_like PF17124.4 196 CUFF.47.1.p1 - 199 1.7e-10 33.8 0.3 1 1 7e-11 4.2e-09 29.3 0.3 3 155 47 185 46 198 0.78 ThiJ/PfpI family-like Hydantoinase_B PF02538.13 516 CUFF.44.1.p1 - 1318 2e-215 708.9 0.1 1 1 8.4e-217 3.3e-215 708.2 0.1 1 516 749 1285 749 1285 0.98 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.17 291 CUFF.44.1.p1 - 1318 8.1e-107 349.6 0.2 1 2 0.81 32 -3.5 0.2 82 95 5 18 4 22 0.87 Hydantoinase/oxoprolinase Hydantoinase_A PF01968.17 291 CUFF.44.1.p1 - 1318 8.1e-107 349.6 0.2 2 2 2.1e-108 8.1e-107 349.6 0.2 1 290 239 540 239 541 0.98 Hydantoinase/oxoprolinase Hydant_A_N PF05378.12 178 CUFF.44.1.p1 - 1318 8.2e-66 214.0 1.6 1 2 3.4e-66 1.3e-64 210.0 0.0 1 178 4 220 4 220 0.98 Hydantoinase/oxoprolinase N-terminal region Hydant_A_N PF05378.12 178 CUFF.44.1.p1 - 1318 8.2e-66 214.0 1.6 2 2 0.019 0.73 2.4 0.6 2 14 325 337 324 355 0.82 Hydantoinase/oxoprolinase N-terminal region MFS_1 PF07690.15 353 CUFF.37.1.p1 - 547 1.7e-41 135.1 27.5 1 2 4.4e-43 1.7e-41 135.1 27.5 2 349 113 492 112 497 0.82 Major Facilitator Superfamily MFS_1 PF07690.15 353 CUFF.37.1.p1 - 547 1.7e-41 135.1 27.5 2 2 0.15 5.9 -1.5 0.1 230 256 500 529 493 543 0.53 Major Facilitator Superfamily Sugar_tr PF00083.23 452 CUFF.37.1.p1 - 547 7.7e-10 31.0 30.1 1 1 4.1e-11 1.6e-09 30.0 30.1 25 437 121 530 105 534 0.75 Sugar (and other) transporter MFS_4 PF06779.13 363 CUFF.37.1.p1 - 547 6e-06 18.6 6.1 1 3 0.16 6.3 -1.2 0.2 146 206 101 156 98 157 0.65 Uncharacterised MFS-type transporter YbfB MFS_4 PF06779.13 363 CUFF.37.1.p1 - 547 6e-06 18.6 6.1 2 3 5.1e-07 2e-05 16.9 0.5 38 175 152 288 132 311 0.84 Uncharacterised MFS-type transporter YbfB MFS_4 PF06779.13 363 CUFF.37.1.p1 - 547 6e-06 18.6 6.1 3 3 0.0035 0.14 4.3 0.1 119 144 374 399 365 405 0.85 Uncharacterised MFS-type transporter YbfB TPP_enzyme_N PF02776.17 172 CUFF.32.1.p1 - 595 5.1e-39 126.5 0.0 1 2 5.4e-39 1.6e-37 121.7 0.1 1 170 9 183 9 185 0.94 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_N PF02776.17 172 CUFF.32.1.p1 - 595 5.1e-39 126.5 0.0 2 2 0.02 0.59 2.6 0.0 136 161 516 541 428 545 0.91 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.20 153 CUFF.32.1.p1 - 595 1e-26 86.5 0.6 1 3 0.03 0.9 2.2 0.0 115 153 132 172 107 172 0.80 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_C PF02775.20 153 CUFF.32.1.p1 - 595 1e-26 86.5 0.6 2 3 1.9 55 -3.6 0.1 112 124 234 246 227 252 0.76 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_C PF02775.20 153 CUFF.32.1.p1 - 595 1e-26 86.5 0.6 3 3 9.4e-27 2.8e-25 81.8 0.0 24 153 415 539 395 539 0.85 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.21 137 CUFF.32.1.p1 - 595 4.4e-24 77.7 0.0 1 1 2.9e-25 8.6e-24 76.8 0.0 3 113 207 316 205 325 0.90 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.15 168 CUFF.32.1.p1 - 595 5.5e-07 22.4 0.0 1 2 0.36 11 -1.3 0.0 18 41 130 154 125 156 0.80 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit CO_dh PF02552.15 168 CUFF.32.1.p1 - 595 5.5e-07 22.4 0.0 2 2 1e-07 2.9e-06 20.0 0.0 14 78 194 257 175 297 0.74 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF3288 PF11691.7 89 CUFF.32.1.p3 - 121 0.0001 15.3 0.0 1 1 1.4e-06 0.00016 14.6 0.0 17 62 72 117 68 119 0.90 Protein of unknown function (DUF3288) MatE PF01554.17 161 CUFF.39.1.p1 - 456 1.1e-63 206.6 23.8 1 2 1.6e-39 9.2e-38 122.3 4.7 1 161 17 177 17 177 0.99 MatE MatE PF01554.17 161 CUFF.39.1.p1 - 456 1.1e-63 206.6 23.8 2 2 1.5e-29 8.6e-28 89.9 11.1 4 159 240 396 239 398 0.98 MatE Polysacc_synt_C PF14667.5 142 CUFF.39.1.p1 - 456 2.1e-09 30.5 3.6 1 4 0.34 20 -1.8 1.1 13 26 51 64 18 109 0.61 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.39.1.p1 - 456 2.1e-09 30.5 3.6 2 4 3.5e-11 2.1e-09 30.5 3.6 2 115 131 252 130 273 0.79 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.39.1.p1 - 456 2.1e-09 30.5 3.6 3 4 0.14 8.5 -0.6 2.6 109 136 295 326 266 332 0.55 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_C PF14667.5 142 CUFF.39.1.p1 - 456 2.1e-09 30.5 3.6 4 4 0.0013 0.075 6.0 5.5 4 79 353 430 343 444 0.76 Polysaccharide biosynthesis C-terminal domain Transferase PF02458.14 434 CUFF.2.1.p1 - 124 0.00031 12.3 0.0 1 1 3.1e-06 0.00037 12.1 0.0 348 403 49 107 37 111 0.76 Transferase family Aminotran_5 PF00266.18 371 CUFF.40.1.p1 - 435 6.3e-47 153.1 0.0 1 1 1.8e-48 1.1e-46 152.3 0.0 41 369 59 376 25 378 0.89 Aminotransferase class-V Aminotran_1_2 PF00155.20 363 CUFF.40.1.p1 - 435 5e-06 18.7 0.0 1 1 1.5e-07 9e-06 17.9 0.0 48 334 65 357 61 375 0.71 Aminotransferase class I and II Fungal_trans PF04082.17 267 CUFF.40.1.p2 - 326 2e-42 137.9 0.2 1 1 2.3e-44 2.8e-42 137.5 0.2 1 200 120 311 120 324 0.93 Fungal specific transcription factor domain REPA_OB_2 PF16900.4 98 CUFF.40.1.p3 - 295 0.0006 12.7 0.0 1 1 9e-06 0.0011 11.9 0.0 50 96 143 196 134 198 0.81 Replication protein A OB domain Amidohydro_1 PF01979.19 344 CUFF.26.1.p1 - 462 5.5e-82 268.7 0.4 1 1 1.1e-83 6.6e-82 268.4 0.4 1 343 55 420 55 421 0.96 Amidohydrolase family Amidohydro_3 PF07969.10 473 CUFF.26.1.p1 - 462 4.5e-17 55.5 0.1 1 2 4.8e-05 0.0029 10.0 0.1 5 25 51 71 50 82 0.86 Amidohydrolase family Amidohydro_3 PF07969.10 473 CUFF.26.1.p1 - 462 4.5e-17 55.5 0.1 2 2 3.4e-15 2e-13 43.4 0.0 265 472 211 421 163 422 0.75 Amidohydrolase family SAUGI PF06106.10 111 CUFF.26.1.p2 - 121 0.00079 12.5 0.8 1 2 0.001 0.12 5.5 0.1 66 92 12 38 3 50 0.79 S. aureus uracil DNA glycosylase inhibitor SAUGI PF06106.10 111 CUFF.26.1.p2 - 121 0.00079 12.5 0.8 2 2 0.00065 0.077 6.1 0.1 57 90 64 98 46 105 0.77 S. aureus uracil DNA glycosylase inhibitor Fungal_trans PF04082.17 267 CUFF.45.1.p1 - 586 3.1e-12 38.9 4.7 1 1 8.6e-13 1.3e-11 36.9 4.7 4 197 151 329 148 351 0.75 Fungal specific transcription factor domain zf-C2H2 PF00096.25 23 CUFF.45.1.p1 - 586 6.1e-10 32.1 9.4 1 2 4.7e-06 6.9e-05 16.2 1.0 1 20 31 50 31 51 0.95 Zinc finger, C2H2 type zf-C2H2 PF00096.25 23 CUFF.45.1.p1 - 586 6.1e-10 32.1 9.4 2 2 3.7e-07 5.5e-06 19.7 1.9 2 23 60 82 59 82 0.96 Zinc finger, C2H2 type zf-C2H2_6 PF13912.5 27 CUFF.45.1.p1 - 586 3.2e-06 20.0 3.1 1 2 2.2e-07 3.2e-06 20.0 3.1 1 26 30 55 30 56 0.96 C2H2-type zinc finger zf-C2H2_6 PF13912.5 27 CUFF.45.1.p1 - 586 3.2e-06 20.0 3.1 2 2 5 73 -3.5 0.6 4 7 61 64 60 65 0.86 C2H2-type zinc finger zf-C2H2_4 PF13894.5 24 CUFF.45.1.p1 - 586 1.5e-05 18.6 12.9 1 2 0.00062 0.0092 10.0 4.0 1 20 31 50 31 53 0.89 C2H2-type zinc finger zf-C2H2_4 PF13894.5 24 CUFF.45.1.p1 - 586 1.5e-05 18.6 12.9 2 2 7.1e-05 0.001 12.9 1.6 2 24 60 82 59 82 0.93 C2H2-type zinc finger zf-H2C2_2 PF13465.5 26 CUFF.45.1.p1 - 586 0.00067 13.1 15.4 1 3 0.0024 0.035 7.6 0.4 12 26 28 42 26 42 0.83 Zinc-finger double domain zf-H2C2_2 PF13465.5 26 CUFF.45.1.p1 - 586 0.00067 13.1 15.4 2 3 0.0004 0.0058 10.1 4.9 1 21 45 65 45 70 0.90 Zinc-finger double domain zf-H2C2_2 PF13465.5 26 CUFF.45.1.p1 - 586 0.00067 13.1 15.4 3 3 0.33 4.9 0.9 0.1 2 10 74 83 74 89 0.70 Zinc-finger double domain zf-C2H2_jaz PF12171.7 27 CUFF.45.1.p1 - 586 0.0025 11.1 5.8 1 3 0.0014 0.021 8.2 0.2 2 21 31 50 30 51 0.92 Zinc-finger double-stranded RNA-binding zf-C2H2_jaz PF12171.7 27 CUFF.45.1.p1 - 586 0.0025 11.1 5.8 2 3 0.011 0.16 5.3 0.1 4 21 61 78 58 79 0.93 Zinc-finger double-stranded RNA-binding zf-C2H2_jaz PF12171.7 27 CUFF.45.1.p1 - 586 0.0025 11.1 5.8 3 3 8 1.2e+02 -3.8 0.1 10 16 166 172 165 172 0.83 Zinc-finger double-stranded RNA-binding zf-Di19 PF05605.11 54 CUFF.45.1.p1 - 586 0.034 7.5 8.1 1 1 0.00016 0.0023 11.2 1.0 3 28 59 85 57 88 0.79 Drought induced 19 protein (Di19), zinc-binding zf-TRAF PF02176.17 60 CUFF.45.1.p1 - 586 0.036 7.8 9.9 1 2 0.0034 0.05 7.3 8.4 9 56 30 72 27 80 0.77 TRAF-type zinc finger zf-TRAF PF02176.17 60 CUFF.45.1.p1 - 586 0.036 7.8 9.9 2 2 2.6 39 -2.0 0.0 26 43 276 293 274 294 0.77 TRAF-type zinc finger MFS_1 PF07690.15 353 CUFF.45.1.p2 - 499 1.6e-39 128.6 21.0 1 2 2.8e-41 1.6e-39 128.6 21.0 2 352 66 429 65 430 0.87 Major Facilitator Superfamily MFS_1 PF07690.15 353 CUFF.45.1.p2 - 499 1.6e-39 128.6 21.0 2 2 0.2 12 -2.4 0.0 282 296 450 464 440 476 0.44 Major Facilitator Superfamily DUF1129 PF06570.10 206 CUFF.45.1.p2 - 499 0.0015 10.9 1.9 1 2 6.9e-05 0.0041 9.5 0.7 88 189 128 229 124 236 0.73 Protein of unknown function (DUF1129) DUF1129 PF06570.10 206 CUFF.45.1.p2 - 499 0.0015 10.9 1.9 2 2 0.17 9.8 -1.5 0.0 119 133 451 465 423 478 0.59 Protein of unknown function (DUF1129) Ribosomal_S3Ae PF01015.17 205 CUFF.54.1.p1 - 253 4.9e-93 303.3 3.9 1 1 2e-94 5.9e-93 303.1 3.9 2 205 16 221 15 221 0.99 Ribosomal S3Ae family SUI1 PF01253.21 76 CUFF.54.1.p1 - 253 1.8e-05 18.2 0.3 1 2 2e-06 5.9e-05 16.5 0.2 3 52 82 132 80 177 0.88 Translation initiation factor SUI1 SUI1 PF01253.21 76 CUFF.54.1.p1 - 253 1.8e-05 18.2 0.3 2 2 1 30 -1.8 0.0 16 38 167 188 158 189 0.69 Translation initiation factor SUI1 DUF2997 PF11211.7 47 CUFF.54.1.p1 - 253 0.00061 12.5 0.0 1 1 4.5e-05 0.0013 11.5 0.0 10 25 83 98 83 103 0.91 Protein of unknown function (DUF2997) NEMO PF11577.7 68 CUFF.54.1.p1 - 253 0.00061 12.8 0.0 1 1 5.9e-05 0.0018 11.3 0.0 22 55 54 87 50 98 0.93 NF-kappa-B essential modulator NEMO DLH PF01738.17 217 CUFF.18.1.p1 - 257 5.1e-11 35.4 0.0 1 1 5e-13 6e-11 35.2 0.0 3 215 41 254 39 256 0.72 Dienelactone hydrolase family Oxidored_FMN PF00724.19 341 CUFF.49.1.p1 - 383 1.2e-136 448.2 0.0 1 1 1.2e-138 1.4e-136 448.0 0.0 1 341 6 353 6 353 0.99 NADH:flavin oxidoreductase / NADH oxidase family Flavodoxin_2 PF02525.16 198 CUFF.49.1.p2 - 197 3e-36 117.9 0.1 1 1 9.7e-38 3.8e-36 117.5 0.1 1 192 1 181 1 189 0.88 Flavodoxin-like fold FMN_red PF03358.14 155 CUFF.49.1.p2 - 197 0.00027 13.6 0.0 1 1 9.2e-05 0.0036 10.0 0.0 1 98 1 84 1 96 0.70 NADPH-dependent FMN reductase DUF4208 PF13907.5 96 CUFF.49.1.p2 - 197 0.001 12.5 0.4 1 1 3.9e-05 0.0015 11.9 0.4 38 82 22 67 11 78 0.86 Domain of unknown function (DUF4208) DUF999 PF06198.10 143 CUFF.5.1.p1 - 169 2.5e-94 305.8 5.8 1 1 5e-96 3e-94 305.5 5.8 1 143 21 163 21 163 0.99 Protein of unknown function (DUF999) Oleosin PF01277.16 113 CUFF.5.1.p1 - 169 0.046 6.4 6.6 1 3 0.41 24 -2.3 0.0 87 107 57 77 47 82 0.60 Oleosin Oleosin PF01277.16 113 CUFF.5.1.p1 - 169 0.046 6.4 6.6 2 3 0.091 5.4 -0.2 0.1 35 46 107 118 104 127 0.85 Oleosin Oleosin PF01277.16 113 CUFF.5.1.p1 - 169 0.046 6.4 6.6 3 3 0.00015 0.0087 8.8 1.0 41 63 141 163 140 167 0.86 Oleosin Ribosomal_S6e PF01092.18 126 CUFF.58.1.p1 - 201 5.7e-62 200.2 0.0 1 1 6.5e-64 7.7e-62 199.8 0.0 1 126 11 136 11 136 1.00 Ribosomal protein S6e MFS_1 PF07690.15 353 CUFF.25.1.p1 - 631 1.6e-23 76.0 37.2 1 2 1.1e-18 4.4e-17 54.9 16.8 2 263 92 349 85 361 0.77 Major Facilitator Superfamily MFS_1 PF07690.15 353 CUFF.25.1.p1 - 631 1.6e-23 76.0 37.2 2 2 4.1e-10 1.6e-08 26.7 12.4 212 353 370 516 357 516 0.76 Major Facilitator Superfamily TRI12 PF06609.12 599 CUFF.25.1.p1 - 631 6.7e-10 30.8 27.0 1 1 3.8e-11 1.5e-09 29.7 27.0 31 494 69 553 49 575 0.69 Fungal trichothecene efflux pump (TRI12) DUF2976 PF11190.7 88 CUFF.25.1.p1 - 631 0.00013 14.6 4.9 1 3 1.8e-05 0.00072 12.3 0.1 28 76 120 168 107 177 0.90 Protein of unknown function (DUF2976) DUF2976 PF11190.7 88 CUFF.25.1.p1 - 631 0.00013 14.6 4.9 2 3 0.025 0.97 2.3 0.1 39 77 307 348 282 351 0.68 Protein of unknown function (DUF2976) DUF2976 PF11190.7 88 CUFF.25.1.p1 - 631 0.00013 14.6 4.9 3 3 0.4 16 -1.6 0.1 58 75 404 421 371 425 0.73 Protein of unknown function (DUF2976) Sugar_tr PF00083.23 452 CUFF.24.1.p1 - 556 6.7e-113 370.7 24.1 1 1 2.1e-114 8.3e-113 370.4 24.1 2 451 10 466 9 467 0.95 Sugar (and other) transporter MFS_1 PF07690.15 353 CUFF.24.1.p1 - 556 2.2e-20 65.7 28.3 1 2 4.1e-18 1.6e-16 53.0 19.0 23 293 47 347 6 350 0.71 Major Facilitator Superfamily MFS_1 PF07690.15 353 CUFF.24.1.p1 - 556 2.2e-20 65.7 28.3 2 2 4.2e-10 1.6e-08 26.7 11.5 3 201 267 475 266 507 0.74 Major Facilitator Superfamily MFS_3 PF05977.12 522 CUFF.24.1.p1 - 556 0.0027 9.0 5.5 1 1 0.0001 0.0041 8.4 5.5 258 364 60 168 49 202 0.73 Transmembrane secretion effector Dak1 PF02733.16 307 CUFF.19.1.p1 - 648 5.1e-110 360.0 0.4 1 1 1.9e-111 7.6e-110 359.4 0.4 2 304 75 396 74 399 0.92 Dak1 domain Dak2 PF02734.16 174 CUFF.19.1.p1 - 648 3.7e-45 146.9 3.1 1 2 0.66 26 -2.4 0.0 70 88 437 455 422 460 0.64 DAK2 domain Dak2 PF02734.16 174 CUFF.19.1.p1 - 648 3.7e-45 146.9 3.1 2 2 1.5e-46 6.1e-45 146.1 2.0 2 173 467 642 466 643 0.96 DAK2 domain Hpt PF01627.22 85 CUFF.19.1.p1 - 648 0.00041 13.6 0.3 1 1 3.3e-05 0.0013 11.9 0.3 32 64 217 248 205 267 0.74 Hpt domain Pombe_5TM PF09437.9 256 CUFF.6.1.p1 - 317 8.2e-158 516.6 19.2 1 1 1.9e-159 1.1e-157 516.1 19.2 15 256 1 242 1 242 1.00 Pombe specific 5TM protein Lung_7-TM_R PF06814.12 295 CUFF.6.1.p1 - 317 6.4e-08 25.0 18.7 1 1 1.7e-09 9.9e-08 24.4 18.7 59 258 80 270 26 288 0.83 Lung seven transmembrane receptor GLEYA PF10528.8 91 CUFF.30.2.p1 - 249 1.2e-18 60.3 0.7 1 3 0.58 69 -3.0 0.0 59 86 20 45 14 50 0.50 GLEYA domain GLEYA PF10528.8 91 CUFF.30.2.p1 - 249 1.2e-18 60.3 0.7 2 3 0.28 32 -2.0 0.1 75 75 66 66 31 96 0.59 GLEYA domain GLEYA PF10528.8 91 CUFF.30.2.p1 - 249 1.2e-18 60.3 0.7 3 3 9.9e-21 1.2e-18 60.3 0.7 2 79 170 249 169 249 0.95 GLEYA domain GLEYA PF10528.8 91 CUFF.30.1.p1 - 335 5.1e-19 61.5 0.7 1 1 1.7e-20 2e-18 59.6 0.7 2 79 256 335 255 335 0.95 GLEYA domain Asparaginase PF00710.19 191 CUFF.15.1.p1 - 367 2.7e-54 176.5 0.6 1 1 3.1e-56 3.6e-54 176.1 0.6 1 182 47 233 47 241 0.96 Asparaginase, N-terminal GLEYA PF10528.8 91 CUFF.31.1.p1 - 386 5.7e-21 67.8 1.8 1 1 1.8e-22 2.1e-20 65.9 1.8 2 89 256 345 255 347 0.95 GLEYA domain Oxidored_FMN PF00724.19 341 CUFF.48.1.p1 - 383 1.2e-136 448.2 0.0 1 1 1.2e-138 1.4e-136 448.0 0.0 1 341 6 353 6 353 0.99 NADH:flavin oxidoreductase / NADH oxidase family His_Phos_1 PF00300.21 194 CUFF.48.1.p2 - 220 6.5e-24 77.6 0.0 1 1 7e-26 8.2e-24 77.3 0.0 1 181 9 203 9 215 0.86 Histidine phosphatase superfamily (branch 1) Flavodoxin_2 PF02525.16 198 CUFF.48.1.p3 - 197 3e-36 117.9 0.1 1 1 9.7e-38 3.8e-36 117.5 0.1 1 192 1 181 1 189 0.88 Flavodoxin-like fold FMN_red PF03358.14 155 CUFF.48.1.p3 - 197 0.00027 13.6 0.0 1 1 9.2e-05 0.0036 10.0 0.0 1 98 1 84 1 96 0.70 NADPH-dependent FMN reductase DUF4208 PF13907.5 96 CUFF.48.1.p3 - 197 0.001 12.5 0.4 1 1 3.9e-05 0.0015 11.9 0.4 38 82 22 67 11 78 0.86 Domain of unknown function (DUF4208) PLA2_B PF01735.17 491 CUFF.12.1.p1 - 674 4.3e-206 677.9 1.8 1 1 8.8e-208 5.2e-206 677.6 1.8 1 490 132 614 132 615 0.99 Lysophospholipase catalytic domain IBR PF01485.20 62 CUFF.12.1.p1 - 674 0.0007 12.8 2.4 1 1 2.5e-05 0.0015 11.8 2.4 10 51 569 611 561 613 0.71 IBR domain, a half RING-finger domain CRCB PF02537.14 95 CUFF.14.1.p1 - 312 1.5e-32 104.7 23.7 1 3 2.5e-19 1.5e-17 56.7 7.3 3 92 8 118 6 123 0.83 CrcB-like protein, Camphor Resistance (CrcB) CRCB PF02537.14 95 CUFF.14.1.p1 - 312 1.5e-32 104.7 23.7 2 3 0.66 39 -2.4 0.1 44 56 166 180 143 183 0.58 CrcB-like protein, Camphor Resistance (CrcB) CRCB PF02537.14 95 CUFF.14.1.p1 - 312 1.5e-32 104.7 23.7 3 3 1e-19 5.9e-18 58.0 3.7 3 93 190 296 188 299 0.86 CrcB-like protein, Camphor Resistance (CrcB) DUF2157 PF09925.8 147 CUFF.14.1.p1 - 312 0.028 7.1 8.8 1 2 0.11 6.4 -0.5 0.2 109 109 75 75 10 128 0.54 Predicted membrane protein (DUF2157) DUF2157 PF09925.8 147 CUFF.14.1.p1 - 312 0.028 7.1 8.8 2 2 6.1e-05 0.0036 10.0 3.5 34 120 156 243 142 265 0.89 Predicted membrane protein (DUF2157) DUF999 PF06198.10 143 CUFF.3.1.p1 - 289 1.2e-90 293.9 4.2 1 1 1.6e-92 1.9e-90 293.2 4.2 1 143 21 163 21 163 0.99 Protein of unknown function (DUF999) Phosphodiest PF01663.21 357 CUFF.53.1.p1 - 759 1.4e-16 53.9 2.6 1 2 4e-06 0.00024 13.6 0.3 1 59 48 108 48 116 0.87 Type I phosphodiesterase / nucleotide pyrophosphatase Phosphodiest PF01663.21 357 CUFF.53.1.p1 - 759 1.4e-16 53.9 2.6 2 2 3.2e-14 1.9e-12 40.3 0.1 143 237 166 261 117 275 0.77 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.22 309 CUFF.53.1.p1 - 759 5.4e-08 25.4 0.1 1 2 1.5e-05 0.00086 11.6 0.1 3 61 48 106 46 125 0.91 Sulfatase Sulfatase PF00884.22 309 CUFF.53.1.p1 - 759 5.4e-08 25.4 0.1 2 2 1.5e-05 0.0009 11.6 0.0 218 309 223 321 221 321 0.71 Sulfatase Glyco_transf_8 PF01501.19 256 CUFF.51.1.p1 - 372 3.4e-12 39.3 1.6 1 1 3.2e-13 1.2e-11 37.5 1.6 9 221 84 321 77 336 0.81 Glycosyl transferase family 8 Mannosyl_trans3 PF11051.7 275 CUFF.51.1.p1 - 372 0.00029 13.1 1.3 1 1 1.2e-05 0.00048 12.4 1.2 92 143 171 223 85 298 0.70 Mannosyltransferase putative Smim3 PF17307.1 60 CUFF.51.1.p1 - 372 0.0012 11.3 0.5 1 2 0.0082 0.32 3.5 0.0 12 33 11 32 2 35 0.70 Small integral membrane protein 3 Smim3 PF17307.1 60 CUFF.51.1.p1 - 372 0.0012 11.3 0.5 2 2 0.0022 0.085 5.4 0.1 42 56 88 102 85 106 0.89 Small integral membrane protein 3 Glyco_transf_34 PF05637.11 239 CUFF.51.1.p2 - 347 6.5e-87 284.1 0.3 1 1 1.4e-88 8.1e-87 283.8 0.3 2 238 98 334 97 335 0.97 galactosyl transferase GMA12/MNN10 family Nucleotid_trans PF03407.15 212 CUFF.51.1.p2 - 347 6.7e-05 15.8 0.0 1 1 2.1e-06 0.00012 15.0 0.0 106 189 238 318 210 333 0.81 Nucleotide-diphospho-sugar transferase DJ-1_PfpI PF01965.23 165 CUFF.46.1.p1 - 241 1e-15 50.8 0.0 1 1 6.4e-17 3.8e-15 49.0 0.0 12 125 30 168 26 239 0.74 DJ-1/PfpI family ThiJ_like PF17124.4 196 CUFF.46.1.p1 - 241 2.1e-10 33.5 0.2 1 1 8.2e-11 4.8e-09 29.1 0.2 3 160 26 169 25 185 0.78 ThiJ/PfpI family-like Hydantoinase_B PF02538.13 516 CUFF.42.1.p1 - 990 2.8e-213 701.8 0.3 1 1 5.9e-215 3.5e-213 701.5 0.3 1 515 459 986 459 987 0.98 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.17 291 CUFF.42.1.p1 - 990 9.3e-91 296.9 0.0 1 1 2.7e-92 1.6e-90 296.2 0.0 44 290 1 252 1 253 0.97 Hydantoinase/oxoprolinase DJ-1_PfpI PF01965.23 165 CUFF.42.1.p2 - 223 4.6e-10 32.4 0.0 1 1 1.4e-11 8.4e-10 31.6 0.0 52 161 75 215 15 219 0.78 DJ-1/PfpI family ThiJ_like PF17124.4 196 CUFF.42.1.p2 - 223 0.00096 11.8 0.2 1 1 3e-05 0.0018 10.9 0.2 77 169 77 164 16 190 0.77 ThiJ/PfpI family-like TRAPP PF04051.15 146 CUFF.55.1.p1 - 168 7.7e-26 83.5 0.2 1 1 8.5e-28 1e-25 83.1 0.2 1 99 34 142 34 163 0.88 Transport protein particle (TRAPP) component Acetyltransf_10 PF13673.6 127 CUFF.35.1.p1 - 151 5.6e-22 71.0 0.0 1 1 5e-23 6.5e-22 70.8 0.0 32 127 50 150 28 150 0.90 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.24 117 CUFF.35.1.p1 - 151 6.5e-15 48.4 0.0 1 1 5.9e-16 7.7e-15 48.1 0.0 18 117 35 129 16 129 0.77 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.6 76 CUFF.35.1.p1 - 151 5.7e-13 42.1 0.0 1 1 5.9e-14 7.7e-13 41.7 0.0 5 76 29 131 25 131 0.68 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.6 128 CUFF.35.1.p1 - 151 3.2e-07 23.4 0.0 1 1 8.7e-08 1.1e-06 21.6 0.0 72 127 72 131 11 132 0.71 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.5 101 CUFF.35.1.p1 - 151 5.7e-07 23.2 0.0 1 1 1.2e-07 1.6e-06 21.7 0.0 1 82 25 102 25 106 0.78 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.4 210 CUFF.35.1.p1 - 151 1.3e-06 21.0 0.1 1 1 2.8e-07 3.7e-06 19.4 0.1 28 154 5 149 1 150 0.84 Putative acetyl-transferase FR47 PF08445.9 86 CUFF.35.1.p1 - 151 8.4e-06 18.7 0.0 1 1 9.3e-07 1.2e-05 18.2 0.0 18 81 70 133 53 137 0.85 FR47-like protein Acetyltransf_CG PF14542.5 80 CUFF.35.1.p1 - 151 1.6e-05 17.9 0.0 1 1 2.3e-06 3.1e-05 17.1 0.0 8 56 57 105 50 108 0.87 GCN5-related N-acetyl-transferase GNAT_acetyltr_2 PF13718.5 227 CUFF.35.1.p1 - 151 0.0004 12.7 0.0 1 1 4e-05 0.00053 12.3 0.0 94 131 72 109 67 130 0.79 GNAT acetyltransferase 2 Aldo_ket_red PF00248.20 292 CUFF.17.1.p1 - 352 4.9e-69 225.5 0.0 1 1 1.9e-70 5.7e-69 225.3 0.0 1 289 21 340 21 342 0.91 Aldo/keto reductase family HTH_29 PF13551.5 63 CUFF.17.1.p1 - 352 0.00089 12.3 0.0 1 2 0.0044 0.13 5.3 0.0 16 35 122 141 111 145 0.88 Winged helix-turn helix HTH_29 PF13551.5 63 CUFF.17.1.p1 - 352 0.00089 12.3 0.0 2 2 0.011 0.32 4.0 0.0 10 30 278 298 271 301 0.83 Winged helix-turn helix DsrD PF08679.10 64 CUFF.17.1.p1 - 352 0.00099 12.3 0.0 1 2 4 1.2e+02 -4.1 0.0 21 33 102 114 97 116 0.82 Dissimilatory sulfite reductase D (DsrD) DsrD PF08679.10 64 CUFF.17.1.p1 - 352 0.00099 12.3 0.0 2 2 9.6e-05 0.0028 10.9 0.0 2 58 132 188 131 192 0.80 Dissimilatory sulfite reductase D (DsrD) HTH_psq PF05225.15 45 CUFF.17.1.p1 - 352 0.0012 11.5 0.3 1 3 0.01 0.31 3.8 0.0 24 33 81 90 80 93 0.91 helix-turn-helix, Psq domain HTH_psq PF05225.15 45 CUFF.17.1.p1 - 352 0.0012 11.5 0.3 2 3 0.66 19 -1.9 0.0 7 16 169 179 165 180 0.80 helix-turn-helix, Psq domain HTH_psq PF05225.15 45 CUFF.17.1.p1 - 352 0.0012 11.5 0.3 3 3 0.0086 0.25 4.1 0.0 21 33 285 297 281 304 0.87 helix-turn-helix, Psq domain Glyco_hydro_cc PF11790.7 239 CUFF.59.1.p1 - 531 3.6e-61 199.6 0.0 1 1 4.5e-63 5.3e-61 199.1 0.0 1 239 298 528 298 528 0.92 Glycosyl hydrolase catalytic core Oxidored_FMN PF00724.19 341 CUFF.52.1.p1 - 393 3.9e-138 453.2 0.0 1 1 3.8e-140 4.5e-138 453.0 0.0 1 341 12 360 12 360 0.99 NADH:flavin oxidoreductase / NADH oxidase family Glyco_transf_34 PF05637.11 239 CUFF.52.1.p2 - 330 3.5e-86 281.7 0.0 1 1 1.1e-87 4.2e-86 281.4 0.0 2 239 84 318 83 318 0.98 galactosyl transferase GMA12/MNN10 family DUF705 PF05152.11 304 CUFF.52.1.p2 - 330 0.00054 12.4 0.0 1 1 2.4e-05 0.00095 11.6 0.0 225 270 70 116 58 152 0.73 Protein of unknown function (DUF705) Fig1 PF12351.7 188 CUFF.52.1.p2 - 330 0.00096 12.0 0.1 1 1 3.7e-05 0.0015 11.4 0.1 73 147 7 79 2 95 0.75 Ca2+ regulator and membrane fusion protein Fig1 Pantoate_transf PF02548.14 259 CUFF.52.1.p3 - 240 9e-98 319.6 0.0 1 1 1.7e-99 1e-97 319.5 0.0 2 235 6 238 5 240 0.98 Ketopantoate hydroxymethyltransferase Asp_Glu_race PF01177.21 224 CUFF.52.1.p3 - 240 3.8e-06 19.8 0.0 1 1 1.2e-07 7.2e-06 18.9 0.0 49 98 157 205 141 211 0.87 Asp/Glu/Hydantoin racemase MIP PF00230.19 227 CUFF.20.1.p1 - 599 2.2e-51 167.6 6.0 1 1 4.9e-53 2.9e-51 167.2 6.0 6 227 308 548 303 548 0.91 Major intrinsic protein MDM31_MDM32 PF08118.10 525 CUFF.20.1.p1 - 599 0.0012 10.4 0.1 1 1 3.3e-05 0.002 9.7 0.1 365 448 134 218 124 228 0.68 Yeast mitochondrial distribution and morphology (MDM) proteins Dak1 PF02733.16 307 CUFF.20.1.p2 - 204 1.7e-52 171.0 1.0 1 1 3.5e-54 2.1e-52 170.8 1.0 2 125 75 202 74 204 0.95 Dak1 domain Usher PF00577.19 551 CUFF.20.1.p2 - 204 0.0007 11.4 0.0 1 1 1.4e-05 0.00085 11.1 0.0 35 132 17 114 2 116 0.77 Outer membrane usher protein # # Program: hmmscan # Version: 3.3.1 (Jul 2020) # Pipeline mode: SCAN # Query file: transcripts.fasta.transdecoder_dir/longest_orfs.pep # Target file: mini_Pfam-A.hmm # Option settings: hmmscan --domtblout pfam.domtblout mini_Pfam-A.hmm transcripts.fasta.transdecoder_dir/longest_orfs.pep # Current dir: /home/stephan/Projects/git/TransDecoder/sample_data/cufflinks_example # Date: Mon Jan 25 19:01:22 2021 # [ok]