Mercurial > repos > iuc > transit_hmm

comparison test-data/hmm-sites1.txt @ 1:3c83ed97f9ee draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transit/ commit 2281efd6260f058371013e21163fa5931de99080
author iuc
date Tue, 25 Jun 2019 17:44:54 -0400
parents 7c29da8b0011
children 32da07a53d3b
comparison
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0:7c29da8b0011 1:3c83ed97f9ee
1 #HMM - Sites 1 #HMM - Sites
2 # Tn-HMM 2 # Tn-HMM
3 #Console: python /home/inithello/miniconda3/envs/__transit@2.3.3/bin/transit hmm input_file_0.wig,input_file_1.wig annotation.dat transit_out.txt -iN 0.0 -tC 0.0 -r Mean 3 #Console: python /home/inithello/miniconda3/envs/__transit@2.5.2/bin/transit hmm input_file_0.wig,input_file_1.wig annotation.dat transit_out.txt -iN 0.0 -tC 0.0 -r Mean
4 # 4 #
5 # Mean: 225.23 5 # Mean: 225.23
6 # Median: 112.00 6 # Median: 112.00
7 # Normalization: TTR
8 # LOESS Correction: False
7 # pins (obs): 0.548435 9 # pins (obs): 0.548435
8 # pins (est): 0.668453 10 # pins (est): 0.668453
9 # Run length (r): 5 11 # Run length (r): 5
10 # State means: 12 # State means:
11 # ES: 1.0101 GD: 3.6959 NE: 169.5859 GA: 847.9294 13 # ES: 1.0101 GD: 3.6959 NE: 169.5859 GA: 847.9294