Mercurial > repos > iuc > transtermhp
comparison transtermhp.xml @ 6:42b38f6d9f68 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transtermhp commit 91a178ddfde8cc9d6ca5224685a989c5618096fe
| author | iuc |
|---|---|
| date | Tue, 12 Mar 2024 08:09:36 +0000 |
| parents | 012171ba9fce |
| children |
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| 5:012171ba9fce | 6:42b38f6d9f68 |
|---|---|
| 1 <tool id="transtermhp" name="TransTermHP" version="@WRAPPER_VERSION@.1"> | 1 <tool id="transtermhp" name="TransTermHP" version="@WRAPPER_VERSION@.1"> |
| 2 <description>finds rho-independent transcription terminators in bacterial genomes</description> | 2 <description>finds rho-independent transcription terminators in bacterial genomes</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="xrefs"/> | |
| 6 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 7 <expand macro="stdio"/> | 8 <expand macro="stdio"/> |
| 8 <command><![CDATA[ | 9 <command><![CDATA[ |
| 9 ## fix for TRANSTERMHP not set on containers | 10 ## fix for TRANSTERMHP not set on containers |
| 10 TRANSTERMHP=\${TRANSTERMHP:-\$(dirname \$(command -v transterm))/../data/expterm.dat} && | 11 TRANSTERMHP=\${TRANSTERMHP:-\$(dirname \$(command -v transterm))/../data/expterm.dat} && |