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comparison test-data/custom_trimmed_example.009.AA.html @ 0:ebe28cac8d8b draft

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planemo upload for repository https://github.com/inab/trimal commit b537658ca3fbabe1bc6669efc22ac10a18f30671
author iuc
date Fri, 15 Nov 2024 08:59:26 +0000
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-1:000000000000 0:ebe28cac8d8b
1 <!DOCTYPE html>
2 <html><head>
3 <meta http-equiv="Content-Type" content="text/html;charset=ISO-8859-1" />
4 <title>trimAl v1.5.0 Summary</title>
5 <style type="text/css" media="all">
6 #b { background-color: #3366ff; }
7 #r { background-color: #cc0000; }
8 #g { background-color: #33cc00; }
9 #p { background-color: #ff6666; }
10 #m { background-color: #cc33cc; }
11 #o { background-color: #ff9900; }
12 #c { background-color: #46C7C7; }
13 #y { background-color: #FFFF00; }
14 .sel { background-color: #B9B9B9; }
15 .nsel { background-color: #E9E9E9; }
16 .c1 { background-color: #FFFBF2; }
17 .c2 { background-color: #FFF8CC; }
18 .c3 { background-color: #FAF0BE; }
19 .c4 { background-color: #F0EAD6; }
20 .c5 { background-color: #F3E5AB; }
21 .c6 { background-color: #F4C430; }
22 .c7 { background-color: #C2B280; color: white; }
23 .c8 { background-color: #DAA520; color: white; }
24 .c9 { background-color: #B8860B; color: white; }
25 .c10 { background-color: #918151; color: white; }
26 .c11 { background-color: #967117; color: white; }
27 .c12 { background-color: #6E5411; color: white; }
28 </style>
29 </head>
30
31 <body>
32 <pre>
33 <span class=sel>Selected Sequences: 9 /Selected Residues: 63</span>
34 <span class=nsel>Deleted Sequences: 0 /Deleted Residues: 122</span>
35
36 Gaps Scores: <span class=c1> =0= </span><span class=c2> <.001 </span><span class=c3> <.050 </span><span class=c4> <.100 </span><span class=c5> <.150 </span><span class=c6> <.200 </span><span class=c7> <.250 </span><span class=c8> <.350 </span><span class=c9> <.500 </span><span class=c10> <.750 </span><span class=c11> <1.00 </span><span class=c12> =1= </span>
37 Similarity Scores: <span class=c1> =0= </span><span class=c2> <1e-6 </span><span class=c3> <1e-5 </span><span class=c4> <1e-4 </span><span class=c5> <.001 </span><span class=c6> <.010 </span><span class=c7> <.100 </span><span class=c8> <.250 </span><span class=c9> <.500 </span><span class=c10> <.750 </span><span class=c11> <1.00 </span><span class=c12> =1= </span>
38
39 10 20 30 40 50 60 70 80 90 100 110 120
40 =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
41 <span class=sel>Csa004271</span> ---------------------------------M<span id=c>Y</span>M<span id=b>A</span><span id=b>M</span><span id=o>G</span><span id=c>H</span><span id=b>F</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span>KN<span id=b>I</span>SE<span id=c>Y</span><span id=b>F</span><span id=r>K</span><span id=m>E</span>C<span id=g>S</span>E<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span>N<span id=r>K</span><span id=b>M</span><span id=b>I</span>E<span id=b>F</span>H<span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span>T<span id=g>T</span><span id=g>T</span><span id=c>Y</span>F<span id=y>P</span><span id=b>I</span><span id=r>K</span>A<span id=y>P</span><span id=o>G</span>SF<span id=m>D</span><span id=y>P</span>ANFNT<span id=b>I</span>K<span id=b>A</span><span id=b>M</span>N<span id=b>C</span><span id=b>A</span><span id=b>L</span>A<span id=b>L</span><span id=m>E</span>V<span id=g>N</span><span id=b>V</span><span id=g>N</span><span id=r>K</span>S<span id=b>L</span><span id=b>L</span>A<span id=b>L</span>
42 <span class=sel>Xtr21234</span> ----MI<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span>SH<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>V</span><span id=g>N</span><span id=r>R</span>M<span id=b>V</span><span id=g>N</span><span id=b>L</span><span id=m>E</span><span id=b>M</span><span id=c>Y</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span><span id=g>T</span><span id=c>Y</span>L<span id=g>S</span><span id=b>M</span>S<span id=c>H</span><span id=c>Y</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span><span id=c>H</span>H<span id=b>V</span><span id=b>A</span>E<span id=b>F</span><span id=b>F</span><span id=r>K</span><span id=m>E</span>Q<span id=g>S</span>K<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=b>C</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>M</span>K<span id=b>C</span><span id=g>Q</span><span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>V</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>E</span><span id=r>R</span><span id=m>D</span><span id=m>E</span><span id=b>W</span><span id=o>G</span>--<span id=g>S</span>T<span id=b>L</span><span id=m>D</span><span id=b>A</span><span id=b>M</span><span id=g>Q</span><span id=g>T</span><span id=b>A</span><span id=b>L</span>D<span id=b>L</span><span id=m>E</span><span id=r>K</span>H<span id=b>V</span><span id=g>N</span><span id=g>Q</span>A<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
43 <span class=sel>LcaH</span> ----MS<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=b>F</span><span id=c>H</span>Q<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>R</span>Q<span id=b>I</span><span id=g>N</span><span id=b>L</span><span id=m>E</span><span id=b>L</span><span id=c>Y</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span>V<span id=c>Y</span>L<span id=g>S</span><span id=b>M</span>A<span id=c>Y</span><span id=c>Y</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span>Q<span id=b>A</span><span id=b>L</span><span id=c>H</span>N<span id=b>F</span><span id=b>A</span>K<span id=b>F</span><span id=b>F</span><span id=r>R</span>HQ<span id=g>S</span>H<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>M</span>K<span id=b>L</span><span id=g>Q</span><span id=g>N</span><span id=g>Q</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>V</span><span id=r>R</span><span id=r>K</span><span id=y>P</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>E</span><span id=b>W</span><span id=o>G</span>--<span id=g>S</span><span id=o>G</span><span id=b>V</span><span id=m>E</span><span id=b>A</span><span id=b>L</span><span id=m>E</span><span id=b>C</span><span id=b>A</span><span id=b>L</span><span id=g>Q</span><span id=b>L</span><span id=m>E</span><span id=r>K</span>S<span id=b>V</span><span id=g>N</span><span id=g>Q</span>S<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
44 <span class=sel>Hsa167996</span> MTTAST<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=c>H</span>Q<span id=m>D</span>S<span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>R</span>Q<span id=b>I</span><span id=g>N</span><span id=b>L</span><span id=m>E</span><span id=b>L</span><span id=c>Y</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span>V<span id=c>Y</span>L<span id=g>S</span><span id=b>M</span>S<span id=c>Y</span><span id=c>Y</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span>KN<span id=b>F</span><span id=b>A</span>K<span id=c>Y</span><span id=b>F</span>LHQ<span id=g>S</span>H<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>M</span>K<span id=b>L</span><span id=g>Q</span><span id=g>N</span><span id=g>Q</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>D</span>C<span id=m>D</span><span id=m>D</span><span id=b>W</span>E--<span id=g>S</span><span id=o>G</span><span id=b>L</span>N<span id=b>A</span><span id=b>M</span><span id=m>E</span><span id=b>C</span><span id=b>A</span><span id=b>L</span>H<span id=b>L</span><span id=m>E</span><span id=r>K</span><span id=g>N</span><span id=b>V</span><span id=g>N</span><span id=g>Q</span>S<span id=b>L</span><span id=b>L</span><span id=m>E</span><span id=b>L</span>
45 <span class=sel>Mmu024661</span> MTTAS<span id=y>P</span><span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=c>H</span>Q<span id=m>D</span><span id=b>A</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>R</span>Q<span id=b>I</span><span id=g>N</span><span id=b>L</span><span id=m>E</span><span id=b>L</span><span id=c>Y</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span>V<span id=c>Y</span>L<span id=g>S</span><span id=b>M</span>S<span id=b>C</span><span id=c>Y</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span>KN<span id=b>F</span><span id=b>A</span>K<span id=c>Y</span><span id=b>F</span>LHQ<span id=g>S</span>H<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>M</span>K<span id=b>L</span><span id=g>Q</span><span id=g>N</span><span id=g>Q</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>W</span>E--<span id=g>S</span><span id=o>G</span><span id=b>L</span>N<span id=b>A</span><span id=b>M</span><span id=m>E</span><span id=b>C</span><span id=b>A</span><span id=b>L</span>H<span id=b>L</span><span id=m>E</span><span id=r>K</span>S<span id=b>V</span><span id=g>N</span><span id=g>Q</span>S<span id=b>L</span><span id=b>L</span><span id=m>E</span><span id=b>L</span>
46 <span class=sel>Dre37936</span> ---MET<span id=g>S</span><span id=g>Q</span><span id=b>I</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=b>V</span>R<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>K</span>M<span id=b>I</span><span id=g>N</span><span id=b>L</span><span id=m>E</span><span id=b>L</span><span id=c>Y</span><span id=b>A</span><span id=o>G</span><span id=c>Y</span><span id=g>T</span><span id=c>Y</span>T<span id=g>S</span><span id=b>M</span>A<span id=c>H</span><span id=c>Y</span><span id=b>F</span>K<span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span><span id=y>P</span><span id=o>G</span><span id=b>F</span><span id=b>A</span>K<span id=b>F</span><span id=b>F</span><span id=r>K</span>KN<span id=g>S</span>E<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>F</span><span id=b>M</span>E<span id=b>F</span><span id=g>Q</span><span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>V</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>D</span><span id=r>R</span><span id=m>D</span>V<span id=b>W</span><span id=o>G</span>--N<span id=o>G</span><span id=b>L</span>I<span id=b>A</span><span id=b>M</span><span id=g>Q</span><span id=b>C</span><span id=b>A</span><span id=b>L</span><span id=g>Q</span><span id=b>L</span><span id=m>E</span><span id=r>K</span><span id=g>N</span><span id=b>V</span><span id=g>N</span><span id=g>Q</span>A<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
47 <span class=sel>LcaM</span> ----ME<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=c>H</span>R<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>V</span><span id=g>N</span><span id=r>R</span>M<span id=b>V</span><span id=g>N</span><span id=b>M</span><span id=m>E</span><span id=b>M</span><span id=b>F</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span><span id=g>T</span><span id=c>Y</span>T<span id=g>S</span><span id=b>M</span>A<span id=b>F</span><span id=c>Y</span><span id=b>F</span>S<span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span><span id=y>P</span><span id=o>G</span><span id=b>F</span>SH<span id=b>F</span><span id=b>F</span><span id=r>K</span><span id=m>E</span>N<span id=g>S</span>D<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>L</span>S<span id=b>F</span><span id=g>Q</span><span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span>H<span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>E</span><span id=r>R</span><span id=m>D</span><span id=m>E</span><span id=b>W</span><span id=o>G</span>--<span id=g>S</span><span id=o>G</span><span id=b>L</span><span id=m>E</span><span id=b>A</span><span id=b>M</span><span id=g>Q</span><span id=b>C</span><span id=b>A</span><span id=b>L</span><span id=g>Q</span><span id=b>L</span>K<span id=r>K</span><span id=g>N</span><span id=b>V</span><span id=g>N</span><span id=g>Q</span>A<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
48 <span class=sel>Tru14292</span> ----ME<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=c>H</span>R<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>K</span>M<span id=b>I</span><span id=g>N</span><span id=b>M</span><span id=m>E</span><span id=b>L</span><span id=c>Y</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span><span id=g>T</span><span id=c>Y</span>T<span id=g>S</span><span id=b>M</span>A<span id=b>F</span><span id=b>F</span><span id=b>F</span>S<span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span><span id=y>P</span><span id=o>G</span><span id=b>F</span><span id=b>A</span>H<span id=b>F</span><span id=b>F</span><span id=r>K</span><span id=m>E</span>N<span id=g>S</span>D<span id=m>E</span><span id=m>E</span><span id=r>R</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>E</span><span id=r>K</span><span id=b>L</span><span id=b>L</span>S<span id=b>F</span><span id=g>Q</span><span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>E</span><span id=r>R</span><span id=m>D</span><span id=m>E</span><span id=b>W</span><span id=o>G</span>--<span id=g>S</span><span id=o>G</span><span id=b>L</span><span id=m>E</span><span id=b>A</span><span id=b>M</span><span id=g>Q</span><span id=b>C</span><span id=b>A</span><span id=b>L</span><span id=g>Q</span><span id=b>L</span><span id=m>E</span><span id=r>K</span>K<span id=b>V</span><span id=g>N</span><span id=g>Q</span>A<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
49 <span class=sel>Ola20972</span> ----ME<span id=g>S</span><span id=g>Q</span><span id=b>V</span><span id=r>R</span><span id=g>Q</span><span id=g>N</span><span id=c>Y</span><span id=c>H</span>R<span id=m>D</span><span id=b>C</span><span id=m>E</span><span id=b>A</span><span id=b>A</span><span id=b>I</span><span id=g>N</span><span id=r>R</span>M<span id=b>V</span><span id=g>N</span><span id=b>M</span><span id=m>E</span><span id=b>L</span><span id=b>F</span><span id=b>A</span><span id=g>S</span><span id=c>Y</span><span id=g>T</span><span id=c>Y</span>T<span id=g>S</span><span id=b>M</span>A<span id=b>F</span><span id=c>Y</span><span id=b>F</span><span id=m>D</span><span id=r>R</span><span id=m>D</span><span id=m>D</span><span id=b>V</span><span id=b>A</span><span id=b>L</span><span id=y>P</span><span id=o>G</span><span id=b>F</span>SH<span id=b>F</span><span id=b>F</span><span id=r>K</span><span id=m>E</span>N<span id=g>S</span>H<span id=m>E</span><span id=m>E</span><span id=r>K</span><span id=m>E</span><span id=c>H</span><span id=b>A</span><span id=m>D</span><span id=r>K</span><span id=b>L</span><span id=b>L</span>S<span id=b>F</span><span id=g>Q</span><span id=g>N</span><span id=r>K</span><span id=r>R</span><span id=o>G</span><span id=o>G</span><span id=r>R</span><span id=b>I</span><span id=b>F</span><span id=b>L</span><span id=g>Q</span><span id=m>D</span><span id=b>V</span><span id=r>K</span><span id=r>K</span><span id=y>P</span><span id=m>E</span><span id=r>R</span><span id=m>D</span><span id=m>E</span><span id=b>W</span><span id=o>G</span>--<span id=g>S</span><span id=o>G</span><span id=b>L</span><span id=m>E</span><span id=b>A</span><span id=b>M</span><span id=g>Q</span><span id=b>C</span><span id=b>A</span><span id=b>L</span><span id=g>Q</span><span id=b>L</span><span id=m>E</span><span id=r>K</span><span id=g>N</span><span id=b>V</span><span id=g>N</span><span id=g>Q</span>A<span id=b>L</span><span id=b>L</span><span id=m>D</span><span id=b>L</span>
50
51 Selected Cols: <span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span>
52
53 Gaps Scores: <span class=c7> </span><span class=c7> </span><span class=c7> </span><span class=c8> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c5> </span><span class=c5> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span>
54 Similarity Scores: <span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c5> </span><span class=c5> </span><span class=c4> </span><span class=c12> </span><span class=c12> </span><span class=c9> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c8> </span><span class=c5> </span><span class=c6> </span><span class=c12> </span><span class=c6> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c8> </span><span class=c12> </span><span class=c8> </span><span class=c5> </span><span class=c8> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c5> </span><span class=c12> </span><span class=c5> </span><span class=c7> </span><span class=c12> </span><span class=c6> </span><span class=c4> </span><span class=c7> </span><span class=c12> </span><span class=c6> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c12> </span><span class=c4> </span><span class=c5> </span><span class=c6> </span><span class=c7> </span><span class=c5> </span><span class=c7> </span><span class=c12> </span><span class=c6> </span><span class=c5> </span><span class=c4> </span><span class=c12> </span><span class=c5> </span><span class=c12> </span><span class=c12> </span><span class=c9> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c7> </span><span class=c6> </span><span class=c5> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c6> </span><span class=c7> </span><span class=c5> </span><span class=c6> </span><span class=c6> </span><span class=c7> </span><span class=c9> </span><span class=c9> </span><span class=c7> </span><span class=c12> </span><span class=c5> </span><span class=c6> </span><span class=c5> </span><span class=c6> </span><span class=c5> </span><span class=c5> </span><span class=c1> </span><span class=c1> </span><span class=c7> </span><span class=c6> </span><span class=c7> </span><span class=c5> </span><span class=c12> </span><span class=c9> </span><span class=c6> </span><span class=c7> </span><span class=c12> </span><span class=c12> </span><span class=c4> </span><span class=c12> </span><span class=c9> </span><span class=c6> </span><span class=c6> </span><span class=c12> </span><span class=c12> </span><span class=c7> </span><span class=c7> </span><span class=c12> </span><span class=c12> </span><span class=c6> </span><span class=c12> </span>
55
56 130 140 150 160 170 180
57 =========+=========+=========+=========+=========+=========+=====
58 <span class=sel>Csa004271</span> <span id=c>H</span>E--<span id=g>T</span>AN<span id=o>G</span><span id=m>D</span><span id=y>P</span>E<span id=b>F</span>Q<span id=m>D</span><span id=b>F</span><span id=b>I</span><span id=m>E</span>AN<span id=b>F</span><span id=b>L</span>H<span id=m>E</span><span id=g>Q</span><span id=b>V</span><span id=m>D</span><span id=b>A</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=b>L</span>K<span id=m>D</span><span id=c>Y</span><span id=b>I</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>KL<span id=b>V</span><span id=o>G</span>---T<span id=o>G</span><span id=b>L</span><span id=o>G</span><span id=m>E</span><span id=b>F</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span>FKSS-----
59 <span class=sel>Xtr21234</span> <span id=c>H</span>N<span id=b>L</span><span id=b>A</span><span id=g>T</span><span id=m>E</span>RK<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>I</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>L</span><span id=m>E</span><span id=g>S</span>E<span id=c>H</span><span id=b>L</span><span id=m>D</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span>K<span id=c>H</span><span id=b>M</span><span id=r>K</span><span id=r>K</span><span id=b>F</span><span id=o>G</span><span id=m>D</span><span id=c>H</span><span id=b>I</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>K<span id=r>R</span><span id=b>L</span><span id=o>G</span><span id=b>V</span><span id=y>P</span>Q<span id=g>N</span><span id=o>G</span><span id=b>M</span><span id=o>G</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>S</span><span id=b>L</span>S------
60 <span class=sel>LcaH</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>C</span><span id=g>S</span><span id=m>D</span><span id=c>H</span>N<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>I</span><span id=m>E</span><span id=g>T</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=m>D</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span>KS<span id=b>I</span><span id=r>K</span>E<span id=b>L</span>A<span id=m>D</span><span id=b>W</span><span id=b>V</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>R<span id=r>R</span><span id=b>M</span><span id=o>G</span><span id=b>A</span><span id=y>P</span>Q<span id=g>N</span><span id=o>G</span><span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span><span id=o>G</span>KES--S
61 <span class=sel>Hsa167996</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>A</span><span id=g>T</span><span id=m>D</span>KN<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>I</span><span id=m>E</span><span id=g>T</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=g>N</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span>K<span id=b>A</span><span id=b>I</span><span id=r>K</span>E<span id=b>L</span><span id=o>G</span><span id=m>D</span><span id=c>H</span><span id=b>V</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>R<span id=r>K</span><span id=b>M</span><span id=o>G</span><span id=b>A</span><span id=y>P</span>ES<span id=o>G</span><span id=b>L</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span><span id=o>G</span>DSDNES
62 <span class=sel>Mmu024661</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>A</span><span id=g>T</span><span id=m>D</span>KN<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>I</span><span id=m>E</span><span id=g>T</span><span id=c>Y</span><span id=c>Y</span><span id=b>L</span>S<span id=m>E</span><span id=g>Q</span><span id=b>V</span>KS<span id=b>I</span><span id=r>K</span>E<span id=b>L</span><span id=o>G</span><span id=m>D</span><span id=c>H</span><span id=b>V</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>R<span id=r>K</span><span id=b>M</span><span id=o>G</span><span id=b>A</span><span id=y>P</span>EA<span id=o>G</span><span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span><span id=o>G</span>H<span id=o>G</span>D-ES
63 <span class=sel>Dre37936</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>A</span><span id=g>T</span><span id=m>E</span>M<span id=o>G</span><span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>L</span><span id=m>E</span><span id=g>T</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=g>N</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span><span id=m>E</span><span id=b>A</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=b>L</span><span id=o>G</span><span id=m>D</span><span id=c>H</span><span id=b>I</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>S<span id=r>K</span><span id=b>M</span>D<span id=b>A</span><span id=o>G</span>N<span id=g>N</span>R<span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span>DS-----
64 <span class=sel>LcaM</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>A</span><span id=g>S</span><span id=m>D</span><span id=c>H</span><span id=o>G</span><span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>L</span><span id=m>E</span><span id=g>T</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=g>N</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span><span id=m>E</span><span id=b>A</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=b>L</span><span id=o>G</span><span id=m>D</span><span id=c>Y</span><span id=b>I</span><span id=g>S</span><span id=g>N</span><span id=b>L</span>S<span id=r>R</span><span id=b>M</span>D<span id=b>A</span>QK<span id=g>N</span>K<span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>S</span><span id=b>L</span><span id=o>G</span><span id=o>G</span>KS---
65 <span class=sel>Tru14292</span> <span id=c>H</span><span id=r>K</span><span id=b>L</span><span id=b>A</span><span id=g>S</span><span id=m>D</span><span id=c>H</span>V<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>L</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>L</span><span id=m>E</span><span id=g>S</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=g>N</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span><span id=m>E</span><span id=b>A</span><span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=b>L</span><span id=o>G</span><span id=m>D</span><span id=c>Y</span><span id=b>I</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>S<span id=r>R</span><span id=b>M</span>D<span id=b>A</span>QN<span id=g>N</span>K<span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span><span id=o>G</span>SKS---
66 <span class=sel>Ola20972</span> <span id=c>H</span><span id=r>K</span><span id=b>V</span><span id=b>A</span><span id=g>S</span><span id=m>D</span><span id=c>H</span>K<span id=m>D</span><span id=y>P</span><span id=c>H</span><span id=b>M</span><span id=b>C</span><span id=m>D</span><span id=b>F</span><span id=b>L</span><span id=m>E</span><span id=g>T</span><span id=c>H</span><span id=c>Y</span><span id=b>L</span><span id=g>N</span><span id=m>E</span><span id=g>Q</span><span id=b>V</span><span id=m>E</span>S<span id=b>I</span><span id=r>K</span><span id=r>K</span><span id=b>I</span><span id=o>G</span><span id=m>D</span><span id=c>H</span><span id=b>I</span><span id=g>T</span><span id=g>N</span><span id=b>L</span>T<span id=r>R</span><span id=b>M</span>D<span id=b>A</span><span id=c>H</span>T<span id=g>N</span>K<span id=b>M</span><span id=b>A</span><span id=m>E</span><span id=c>Y</span><span id=b>L</span><span id=b>F</span><span id=m>D</span><span id=r>K</span><span id=c>H</span><span id=g>T</span><span id=b>L</span><span id=o>G</span>SKS---
67
68 Selected Cols: <span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=sel> </span><span class=nsel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=sel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span><span class=nsel> </span>
69
70 Gaps Scores: <span class=c12> </span><span class=c12> </span><span class=c11> </span><span class=c11> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c11> </span><span class=c11> </span><span class=c11> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c11> </span><span class=c10> </span><span class=c10> </span><span class=c5> </span><span class=c7> </span><span class=c8> </span>
71 Similarity Scores: <span class=c12> </span><span class=c7> </span><span class=c9> </span><span class=c7> </span><span class=c7> </span><span class=c6> </span><span class=c4> </span><span class=c4> </span><span class=c12> </span><span class=c12> </span><span class=c7> </span><span class=c6> </span><span class=c6> </span><span class=c12> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c7> </span><span class=c5> </span><span class=c6> </span><span class=c12> </span><span class=c5> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c6> </span><span class=c6> </span><span class=c8> </span><span class=c12> </span><span class=c7> </span><span class=c7> </span><span class=c6> </span><span class=c12> </span><span class=c5> </span><span class=c8> </span><span class=c9> </span><span class=c12> </span><span class=c12> </span><span class=c5> </span><span class=c5> </span><span class=c7> </span><span class=c5> </span><span class=c7> </span><span class=c4> </span><span class=c5> </span><span class=c6> </span><span class=c5> </span><span class=c7> </span><span class=c6> </span><span class=c12> </span><span class=c7> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c12> </span><span class=c5> </span><span class=c6> </span><span class=c6> </span><span class=c5> </span><span class=c5> </span><span class=c6> </span><span class=c1> </span><span class=c12> </span><span class=c12> </span>
72 </pre>
73 </body>
74 </html>