Mercurial > repos > iuc > trinity

comparison abundance_estimates_to_matrix.xml @ 7:1b7800489efb draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 6dad4ca6483946af64f484feaff78ac9d1d87352
author iuc
date Mon, 20 Jun 2016 11:44:50 -0400
parents e4a9e0798360
children 258c64019e50
comparison
equal deleted inserted replaced
6:f7564c3f9dc0 7:1b7800489efb
1 <tool id="abundance_estimates_to_matrix" name="Build expression matrix" version="2.1.1"> 1 <tool id="abundance_estimates_to_matrix" name="Build expression matrix" version="2.1.1">
2 <description>for a de novo assembly of RNA-Seq data by Trinity</description> 2 <description>for a de novo assembly of RNA-Seq data by Trinity</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.1.1">trinity</requirement> 4 <requirement type="package" version="2.1.1">trinity</requirement>
5 <requirement type="package" version="1.1.2">bowtie</requirement> 5 <requirement type="package" version="3.14.0">bioconductor-edger</requirement>
6 <requirement type="package" version="1.2">samtools</requirement>
7 <requirement type="package" version="3.12.0">edger</requirement>
8 <requirement type="package" version="3.12.0">bioconductor-edger</requirement>
9 <requirement type="package" version="1.2.28">rsem</requirement>
10 </requirements> 6 </requirements>
11 <stdio> 7 <stdio>
12 <exit_code range="1:"/> 8 <exit_code range="1:"/>
13 </stdio> 9 </stdio>
14 <command><![CDATA[ 10 <command><![CDATA[