Mercurial > repos > iuc > trinity
comparison run_DE_analysis.xml @ 8:258c64019e50 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 811337eaab815f54f0fd93a3dd23a1153993ea2a
author | iuc |
---|---|
date | Tue, 28 Jun 2016 12:22:40 -0400 |
parents | 1b7800489efb |
children |
comparison
equal
deleted
inserted
replaced
7:1b7800489efb | 8:258c64019e50 |
---|---|
77 <param format="tabular" name="contrasts" optional="true" type="data" label="Pairs of sample comparisons to perform" help="A 2-column tabular with lists of pairs of samples to compare"/> | 77 <param format="tabular" name="contrasts" optional="true" type="data" label="Pairs of sample comparisons to perform" help="A 2-column tabular with lists of pairs of samples to compare"/> |
78 </section> | 78 </section> |
79 </inputs> | 79 </inputs> |
80 <outputs> | 80 <outputs> |
81 <collection name="DE_results" type="list" label="Differential expression results on ${on_string}"> | 81 <collection name="DE_results" type="list" label="Differential expression results on ${on_string}"> |
82 <discover_datasets pattern="(?P<name>.+)\.DE_results" ext="tabular" directory="results" visible="true" /> | 82 <discover_datasets pattern="(?P<name>.+)\.DE_results$" ext="tabular" directory="results" /> |
83 </collection> | 83 </collection> |
84 <collection name="PDF_results" type="list" label="Differential expression plots on ${on_string}"> | 84 <collection name="PDF_results" type="list" label="Differential expression plots on ${on_string}"> |
85 <discover_datasets pattern="(?P<name>.+)\.pdf" ext="pdf" directory="results" visible="true" /> | 85 <discover_datasets pattern="(?P<name>.+)\.pdf$" ext="pdf" directory="results" /> |
86 </collection> | 86 </collection> |
87 </outputs> | 87 </outputs> |
88 <tests> | 88 <tests> |
89 <test> | 89 <test> |
90 <param name="matrix" value="count/qcheck/matrix.counts.matrix"/> | 90 <param name="matrix" value="count/qcheck/matrix.counts.matrix"/> |