# HG changeset patch
# User iuc
# Date 1539795390 14400
# Node ID c9cfec002f711774988a42205154e05418e2a2ca
# Parent  ca0588b094384f37f6ca49b693a0f406bedea253
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 4b89602ac841ab33422b27a4267916de96101bf5

diff -r ca0588b09438 -r c9cfec002f71 macros.xml
--- a/macros.xml	Thu Aug 23 12:54:35 2018 -0400
+++ b/macros.xml	Wed Oct 17 12:56:30 2018 -0400
@@ -7,7 +7,7 @@
         </requirements>
     </xml>
 
-    <token name="@WRAPPER_VERSION@">2.8.3</token>
+    <token name="@WRAPPER_VERSION@">2.8.4</token>
 
     <token name="@COMMAND_PAIRED_STRAND_JACCARD@">
         #if $pool.inputs.strand.is_strand_specific:
diff -r ca0588b09438 -r c9cfec002f71 trinity.xml
--- a/trinity.xml	Thu Aug 23 12:54:35 2018 -0400
+++ b/trinity.xml	Wed Oct 17 12:56:30 2018 -0400
@@ -190,7 +190,7 @@
                 </conditional>
             </when>
         </conditional>
-        <param name="norm" type="boolean" argument="--normalize_reads" truevalue="--normalize_reads" falsevalue="" checked="true" label="Run in silico normalization of reads" help="Defaults to max. read coverage of 50."/>
+        <param name="norm" type="boolean" argument="--no_normalize_reads" truevalue="" falsevalue="--no_normalize_reads" checked="true" label="Run in silico normalization of reads" help="Defaults to max. read coverage of 50."/>
         <section name="additional_params" title="Additional Options" expanded="False">
             <param name="min_contig_length" argument="--min_contig_length" type="integer" optional="true" value="200" min="1" label="Minimum Contig Length" help="All contigs shorter than this will be discarded"/>