Mercurial > repos > iuc > trinity_align_and_estimate_abundance
view test-data/count/trinityStats/statsfile.txt @ 22:2fb4ee002432 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit ec26c475a013d89b0f973f29250d660e79d4751f
author | iuc |
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date | Wed, 20 Sep 2023 14:53:59 +0000 |
parents | b2bbe9a7f1b8 |
children |
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################################ ## Counts of transcripts, etc. ################################ Total trinity 'genes': 7 Total trinity transcripts: 7 Percent GC: 42.12 ######################################## Stats based on ALL transcript contigs: ######################################## Contig N10: 541 Contig N20: 541 Contig N30: 380 Contig N40: 380 Contig N50: 279 Median contig length: 240 Average contig: 298.14 Total assembled bases: 2087 ##################################################### ## Stats based on ONLY LONGEST ISOFORM per 'GENE': ##################################################### Contig N10: 541 Contig N20: 541 Contig N30: 380 Contig N40: 380 Contig N50: 279 Median contig length: 240 Average contig: 298.14 Total assembled bases: 2087