# HG changeset patch
# User iuc
# Date 1695221956 0
# Node ID 9ff3765e7172a17e96030ec57670f8d3cb2468f4
# Parent  9871e84c26ee617660af312bc21a9b613dfeeb68
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit ec26c475a013d89b0f973f29250d660e79d4751f

diff -r 9871e84c26ee -r 9ff3765e7172 analyze_diff_expr.xml
--- a/analyze_diff_expr.xml	Tue Aug 08 09:05:19 2023 +0000
+++ b/analyze_diff_expr.xml	Wed Sep 20 14:59:16 2023 +0000
@@ -96,7 +96,7 @@
     </outputs>
     <tests>
         <!-- Test without GO enrichment analysis -->
-        <test>
+        <test expect_num_outputs="9">
             <param name="matrix" value="count/qcheck/matrix.counts.matrix"/>
             <param name="samples" value="count/samples.txt"/>
             <param name="DE_results">
@@ -125,7 +125,7 @@
             <output name="rdata" compare="sim_size" file="count/analyze_diff_expr/results.matrix.RData"/>
         </test>
         <!-- Test without GO enrichment analysis, test name of DE_results input files different from those generated by tool run_de_analysis.pl -->
-        <test>
+        <test expect_num_outputs="9">
             <param name="matrix" value="count/qcheck/matrix.counts.matrix"/>
             <param name="samples" value="count/samples.txt"/>
             <param name="DE_results">
@@ -154,7 +154,7 @@
             <output name="rdata" compare="sim_size" file="count/analyze_diff_expr/results.matrix.RData"/>
         </test>
         <!-- Test with GO enrichment analysis -->
-        <test>
+        <test expect_num_outputs="10">
             <param name="matrix" value="count/qcheck/matrix.counts.matrix"/>
             <param name="samples" value="count/samples.txt"/>
             <param name="DE_results">