Mercurial > repos > iuc > trinity_run_de_analysis
comparison run_de_analysis.xml @ 1:18213f29e0b9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 95f3e6a69bf939326c73a98e3306bccae8414ecd
author | iuc |
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date | Fri, 18 Nov 2016 06:08:32 -0500 |
parents | 1563554bb3f0 |
children | 36b2700b604d |
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0:1563554bb3f0 | 1:18213f29e0b9 |
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1 <tool id="trinity_run_de_analysis" name="Differential expression analysis" version="@WRAPPER_VERSION@.0"> | 1 <tool id="trinity_run_de_analysis" name="Differential expression analysis" version="@WRAPPER_VERSION@.1"> |
2 <description>using a Trinity assembly</description> | 2 <description>using a Trinity assembly</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="requirements"> | 6 <expand macro="requirements"> |
157 ConditionC CondC_replicate2 | 157 ConditionC CondC_replicate2 |
158 ----------- ---------------- | 158 ----------- ---------------- |
159 ConditionC CondC_replicate3 | 159 ConditionC CondC_replicate3 |
160 =========== ================ | 160 =========== ================ |
161 | 161 |
162 | |
163 This file can be generated with the 'Describe samples and replicates' tool. | |
162 It will probably be the same file as used in the tool 'RNASeq samples quality check for transcript quantification'. | 164 It will probably be the same file as used in the tool 'RNASeq samples quality check for transcript quantification'. |
163 The names in column 2 must match the names given in the tool 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity'. | 165 The names in column 2 must match the names given in the tool 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity'. |
164 | 166 |
165 | 167 |
166 .. _Trinity: http://trinityrnaseq.github.io | 168 .. _Trinity: http://trinityrnaseq.github.io |