Mercurial > repos > iuc > trinity_run_de_analysis

changeset 8:047c22569787 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 5098e1bf7037e204f24fa1cbf7c3749bf0779550
author iuc
date Mon, 22 Jan 2018 11:29:32 -0500
parents 2463ce1f16d6
children 48537273a30b
files README.rst
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Fri Dec 15 08:01:47 2017 -0500
+++ b/README.rst	Mon Jan 22 11:29:32 2018 -0500
@@ -9,7 +9,7 @@
 By default, this tool is configured to limit the memory consumption to 1G.
 You might need to lower this limit if the machine(s) executing the jobs have less memory available.
 If you have a lot of reads to assemble and a machine with enough memory, you can increase it.
-In both cases, you can set the TRINITY_MAX_MEMORY environmental variable in the destination section of the job_conf.xml file::
+In both cases, you can set the GALAXY_MEMORY_MB environmental variable in the destination section of the job_conf.xml file::
 
     <?xml version="1.0"?>
     <!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). -->
@@ -22,7 +22,7 @@
         </handlers>
         <destinations>
             <destination id="local" runner="local">
-                <env id="TRINITY_MAX_MEMORY">1G</env>
+                <env id="GALAXY_MEMORY_MB">1G</env>
             </destination>
         </destinations>
     </job_conf>