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diff test-data/count/exp_diff/input.matrix.wt_37_vs_wt_GSNO.voom.DE_results @ 9:226663afe49c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 9dcdb5348f7439d0ce1e44ed23ad226beb4ae6d4
author iuc
date Thu, 14 Jun 2018 03:13:56 -0400
parents 7e6f53726329
children 1b1a25f93f80
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line diff
--- a/test-data/count/exp_diff/input.matrix.wt_37_vs_wt_GSNO.voom.DE_results	Mon Jan 22 11:29:45 2018 -0500
+++ b/test-data/count/exp_diff/input.matrix.wt_37_vs_wt_GSNO.voom.DE_results	Thu Jun 14 03:13:56 2018 -0400
@@ -1,39 +1,38 @@
-logFC	logCPM	PValue	FDR
-TR131|c0_g1_i1	5.8235943392439	16.1127963113785	7.14846919291531e-10	2.71641829330782e-08
-TR4277|c0_g1_i1	-4.41182125975734	17.3835558041266	1.56187740933885e-09	2.96756707774382e-08
-TR3091|c0_g1_i1	4.43711915085412	14.1189484156579	4.80332538807657e-08	5.96619459206176e-07
-TR2487|c0_g1_i1	1.58597331690052	15.926957585609	6.28020483374923e-08	5.96619459206176e-07
-TR4761|c0_g1_i1	-2.92047098366841	16.2714320125634	5.50582910815067e-07	4.18443012219451e-06
-TR1479|c0_g1_i1	1.67737907773679	14.6004783880878	9.51214752241748e-07	5.52604916020242e-06
-TR3638|c0_g1_i1	-1.50273266496817	15.0596817330556	1.02518921423282e-06	5.52604916020242e-06
-TR3788|c0_g1_i1	2.93902285611693	12.9382150715361	2.41689084349911e-06	1.02046502281074e-05
-TR3854|c0_g1_i1	0.759398996973938	17.5343629610585	1.16337877056893e-06	5.52604916020242e-06
-TR2107|c1_g1_i1	-2.46238704341773	11.2600018185657	0.000160625103091043	0.000554886719769058
-TR2122|c0_g2_i2	0.898555189960494	13.9141616710754	0.000116065228333624	0.000441047867667773
-TR2844|c0_g1_i1	0.712285451514242	14.1964395706942	0.000226456956836179	0.0007171136966479
-TR5212|c0_g1_i1	0.877383155201317	13.0382243238454	0.00044264831250554	0.00129389506732389
-TR4163|c0_g1_i1	-0.417753044994067	14.7100536369854	0.00073550773195026	0.00199637812957928
-TR1449|c0_g1_i1	-0.639430683731338	13.6750299459863	0.0021688744394372	0.00549448191324091
-TR2672|c0_g1_i1	-2.89090970573392	9.81450205355949	0.0110308904582196	0.0220617809164392
-TR127|c1_g1_i1	-3.10441694967501	9.33201892428652	0.0147505107490706	0.0271381068158418
-TR939|c0_g1_i1	0.363392391144623	13.0700139113805	0.00528218330196852	0.0125451853421752
-TR5055|c0_g2_i1	-1.80082179647401	10.290740057161	0.014997374819281	0.0271381068158418
-TR1894|c2_g1_i1	-1.81920882927282	9.4761161835092	0.0211021355265418	0.0348643978264604
-TR1891|c0_g1_i1	0.477106166889499	13.4994625375761	0.00640932243854848	0.0143267207449907
-TR1837|c2_g1_i1	2.21852868850051	7.02301103616459	0.041457300582048	0.063015096884713
-TR3807|c0_g1_i1	-1.9168529396959	7.35599058475032	0.0566225608328877	0.0827560504480666
-TR2779|c0_g1_i1	0.600059279980753	14.0739938889057	0.00964636468216327	0.0203645476623447
-TR24|c0_g1_i1	-0.588697529952342	12.3096839182028	0.0194904179372949	0.0336652673462366
-TR4859|c0_g1_i1	-1.06821251099455	8.91301871295058	0.111617387620425	0.157091138132451
-TR2090|c0_g1_i1	2.22339391910091	8.98366602727699	0.254495907488744	0.322361482819076
-TR4084|c0_g1_i1	0.567566096899832	13.3297126444574	0.036433281659912	0.0576860292948607
-TR2182|c3_g2_i6	-1.0316496616205	7.37334712818428	0.34572838664377	0.423796086853654
-TR2011|c5_g1_i1	0.791574287810665	9.32879226678442	0.161547389819689	0.211682786660282
-TR5075|c0_g1_i1	-0.550289601556128	10.1785868671389	0.12853444928267	0.174439609740767
-TR1678|c0_g1_i1	0.331221243897688	5.95523974949609	0.7547763751788	0.806418050624271
-TR4669|c0_g2_i1	6.27373933776222	13.1239272719772	0.48073138273468	0.553569471027814
-TR1122|c0_g1_i1	-0.199192308627843	7.01379133029712	0.87736931102229	0.87736931102229
-TR3249|c0_g1_i1	0.258869539778469	7.31927198802943	0.798677928444158	0.820263818402108
-TR1982|c2_g1_i1	0.132112224684827	9.08491674138301	0.763974995328257	0.806418050624271
-TR2278|c0_g1_i1	0.0407550618622219	15.423513715505	0.613273487399665	0.685423309446684
-TR1492|c0_g1_i2	-0.0324123498367541	17.1356104672946	0.389074079094509	0.462025468924729
+sampleA	sampleB	logFC	logCPM	PValue	FDR
+TR131|c0_g1_i1	wt_37	wt_GSNO	-5.82360148900389	16.1142242655408	6.54502972918692e-10	2.42166099979916e-08
+TR4277|c0_g1_i1	wt_37	wt_GSNO	4.41183386172098	17.3836256000268	1.7102544921365e-09	3.16397081045253e-08
+TR3091|c0_g1_i1	wt_37	wt_GSNO	-4.43700179801176	14.1203688767724	4.42033048679943e-08	5.45174093371929e-07
+TR2487|c0_g1_i1	wt_37	wt_GSNO	-1.58598083708684	15.9280757073272	7.01720228399608e-08	6.49091211269637e-07
+TR4761|c0_g1_i1	wt_37	wt_GSNO	2.92043321768346	16.2716301848411	5.72725934421127e-07	4.23817191471634e-06
+TR1479|c0_g1_i1	wt_37	wt_GSNO	-1.67738254434993	14.6016057367881	1.03919750932427e-06	5.8615543150164e-06
+TR3638|c0_g1_i1	wt_37	wt_GSNO	1.50288215872986	15.0600281889274	1.12469315856867e-06	5.8615543150164e-06
+TR3788|c0_g1_i1	wt_37	wt_GSNO	-2.93907650045598	12.9393872783943	2.35975448958169e-06	9.70121290161359e-06
+TR3854|c0_g1_i1	wt_37	wt_GSNO	-0.759397690410038	17.5353083640786	1.26736309513868e-06	5.8615543150164e-06
+TR2107|c1_g1_i1	wt_37	wt_GSNO	2.46233758474327	11.260249244859	0.000163907571391062	0.000551325467406299
+TR2122|c0_g2_i2	wt_37	wt_GSNO	-0.898543060702643	13.9151768182402	0.000124408949544541	0.000460313113314803
+TR2844|c0_g1_i1	wt_37	wt_GSNO	-0.712202725875737	14.1973066750225	0.000243984033514546	0.000752284103336518
+TR5212|c0_g1_i1	wt_37	wt_GSNO	-0.87701850957337	13.0391017777502	0.000473838954429694	0.00134861856260759
+TR4163|c0_g1_i1	wt_37	wt_GSNO	0.417694804483349	14.7107025605232	0.000805848497363634	0.00212974245731817
+TR2672|c0_g1_i1	wt_37	wt_GSNO	2.90562993555483	9.81450205355949	0.00822748279906008	0.0169120479758457
+TR1449|c0_g1_i1	wt_37	wt_GSNO	0.640011354440497	13.6755402195434	0.00227354555819909	0.00560807904355776
+TR127|c1_g1_i1	wt_37	wt_GSNO	3.09466453837236	9.33233275488244	0.00997545255499303	0.0184545872267371
+TR1894|c2_g1_i1	wt_37	wt_GSNO	1.8273232048322	9.47625819175118	0.0170307015491222	0.0286425435144327
+TR5055|c0_g2_i1	wt_37	wt_GSNO	1.79897959483123	10.2910629958573	0.0144290410083875	0.025422596062397
+TR939|c0_g1_i1	wt_37	wt_GSNO	-0.363394684962815	13.0708604932728	0.00579686595094712	0.0134052525115652
+TR1837|c2_g1_i1	wt_37	wt_GSNO	-2.21418127698954	7.02378849272624	0.0306005987832276	0.0471759231241425
+TR1891|c0_g1_i1	wt_37	wt_GSNO	-0.477062796219233	13.500309435849	0.00675073796972544	0.0146927826399907
+TR3807|c0_g1_i1	wt_37	wt_GSNO	1.91879773659378	7.35599058475032	0.0402625583382777	0.0572967176352414
+TR2779|c0_g1_i1	wt_37	wt_GSNO	-0.600036558858359	14.0748557225205	0.00991998269314111	0.0184545872267371
+TR24|c0_g1_i1	wt_37	wt_GSNO	0.588796779058576	12.310400953631	0.0185008090691583	0.0297621711112546
+TR4859|c0_g1_i1	wt_37	wt_GSNO	1.06036244689068	8.9138577436531	0.104550838513832	0.143273371296733
+TR4084|c0_g1_i1	wt_37	wt_GSNO	-0.567278869966665	13.330468891507	0.0372234219214301	0.0550906644437166
+TR2011|c5_g1_i1	wt_37	wt_GSNO	-0.789577978066661	9.33004998835934	0.161975973261362	0.206659000367944
+TR2182|c3_g2_i6	wt_37	wt_GSNO	1.02218394394404	7.37517597546907	0.329234058043314	0.406055338253421
+TR5075|c0_g1_i1	wt_37	wt_GSNO	0.549449880041588	10.1791103984097	0.127566698813275	0.168570280574684
+TR4669|c0_g2_i1	wt_37	wt_GSNO	-6.27345157840298	13.126293325041	0.423017017822531	0.489113426857301
+TR1678|c0_g1_i1	wt_37	wt_GSNO	-0.330222398445961	5.95523974949609	0.735881722270124	0.79829094077818
+TR1122|c0_g1_i1	wt_37	wt_GSNO	0.193564460109425	7.01613737702005	0.875819231521416	0.875819231521416
+TR3249|c0_g1_i1	wt_37	wt_GSNO	-0.276543877903423	7.32180296800742	0.776715509946338	0.79829094077818
+TR1982|c2_g1_i1	wt_37	wt_GSNO	-0.131251756802268	9.08566155151058	0.763275890632561	0.79829094077818
+TR2278|c0_g1_i1	wt_37	wt_GSNO	-0.0407242590322052	15.424279874284	0.616230913043451	0.69092556916993
+TR1492|c0_g1_i2	wt_37	wt_GSNO	0.0323916193661019	17.1363857315734	0.39613877470297	0.472810795613223