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view test-data/count/exp_diff/input.matrix.wt_37_vs_wt_ph8.DESeq2.DE_results @ 11:5c1fc038df6b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit c6eab3b60743dfa415dc135d657267cc8a0a31ce
author | iuc |
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date | Tue, 08 Aug 2023 09:07:50 +0000 |
parents | 3064aa8755a0 |
children |
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sampleA sampleB baseMeanA baseMeanB baseMean log2FoldChange lfcSE stat pvalue padj TR4277|c0_g1_i1 wt_37 wt_ph8 4705.34614971641 162.902721493704 2434.12443560506 4.85332629705957 0.130960775627329 37.0593887659196 1.26787233139334e-300 4.81791485929468e-299 TR131|c0_g1_i1 wt_37 wt_ph8 32.0461070493257 1436.30905989883 734.177583474076 -5.49708942597102 0.198466854292742 -27.6977707212647 7.42748041554821e-169 1.41122127895416e-167 TR3091|c0_g1_i1 wt_37 wt_ph8 20.4914097091341 321.651020117047 171.071214913091 -3.98630633515117 0.247421953542881 -16.1113687693049 2.12272588309764e-58 2.47056970915936e-57 TR4761|c0_g1_i1 wt_37 wt_ph8 2012.6141923276 384.620292965437 1198.61724264652 2.38765562387381 0.148312557773368 16.0988095662291 2.60059969385195e-58 2.47056970915936e-57 TR5075|c0_g1_i1 wt_37 wt_ph8 19.3833722195684 136.98672801182 78.1850501156942 -2.81556781738656 0.271397918695417 -10.3743161735385 3.2452744609063e-25 2.46640859028879e-24 TR2779|c0_g1_i1 wt_37 wt_ph8 191.51955185349 1058.15934185376 624.839446853626 -2.46872482043468 0.248047686960726 -9.95262181511715 2.45625242439164e-23 1.55562653544804e-22 TR1891|c0_g1_i1 wt_37 wt_ph8 131.416087212132 376.595292171713 254.005689691923 -1.51763504949468 0.163833329626194 -9.26328637132227 1.98234808918918e-20 1.07613181984555e-19 TR1492|c0_g1_i2 wt_37 wt_ph8 2006.11782336441 890.823502721036 1448.47066304272 1.17138763330801 0.127405972315828 9.1941344037173 3.78025797563516e-20 1.7956225384267e-19 TR2487|c0_g1_i1 wt_37 wt_ph8 418.818667162757 965.862817209246 692.340742186001 -1.2068861494209 0.138672539999103 -8.70313725722991 3.22833072204724e-18 1.36307297153106e-17 TR3638|c0_g1_i1 wt_37 wt_ph8 713.131183384274 326.063958913919 519.597571149096 1.12959116050603 0.141514345090043 7.98216717737901 1.43786102301281e-15 5.46387188744868e-15 TR2122|c0_g2_i2 wt_37 wt_ph8 146.135958637131 360.821667264163 253.478812950647 -1.30611123021679 0.169971549866391 -7.68429323168191 1.53843927144259e-14 5.31460839225623e-14 TR2107|c1_g1_i1 wt_37 wt_ph8 59.5986596731862 1.89840873462066 30.7485342039034 4.94663101068376 0.648801734442532 7.62425676148051 2.45444399374e-14 7.77240598017667e-14 TR1479|c0_g1_i1 wt_37 wt_ph8 158.005105094407 334.827472148091 246.416288621249 -1.08064044509537 0.165852688009601 -6.51566434083244 7.23686413447896e-11 2.11539105469385e-10 TR24|c0_g1_i1 wt_37 wt_ph8 85.6614643869141 199.923709280262 142.792586833588 -1.2309601921531 0.197065470330034 -6.24645296860764 4.19878369504523e-10 1.1396698600837e-09 TR4163|c0_g1_i1 wt_37 wt_ph8 424.593720981574 227.471218917767 326.03246994967 0.902378343080325 0.156120482680009 5.7800125107855 7.46950706225728e-09 1.89227512243851e-08 TR1449|c0_g1_i1 wt_37 wt_ph8 220.782434528097 117.26089394399 169.021664236043 0.916182468982546 0.175267159439456 5.22734819182728 1.71958482582447e-07 4.08401396133312e-07 TR2278|c0_g1_i1 wt_37 wt_ph8 594.657329919233 348.341653317169 471.499491618201 0.773725482804612 0.158144801146882 4.8925129197639 9.95565784679224e-07 2.22538234222415e-06 TR5055|c0_g2_i1 wt_37 wt_ph8 28.6665933385886 6.05959103586122 17.3630921872249 2.22056293047174 0.515653625436262 4.30630722045843 1.66002467176799e-05 3.50449652928799e-05 TR127|c1_g1_i1 wt_37 wt_ph8 16.3791628279609 1.58772512712498 8.98344397754296 3.35782864860774 0.805715621214412 4.16751091848842 3.0794376698456e-05 6.15887533969119e-05 TR1894|c2_g1_i1 wt_37 wt_ph8 16.2826445742552 1.67571344127509 8.97917900776516 3.31835899440704 0.806156235895962 4.1162728099709 3.85048512190321e-05 7.31592173161609e-05 TR2672|c0_g1_i1 wt_37 wt_ph8 22.3129914439134 7.89947501226409 15.1062332280887 1.4879160019133 0.490304786216721 3.03467566244728 0.00240794483755522 0.00435723351557611 TR4084|c0_g1_i1 wt_37 wt_ph8 113.2594381118 173.837287636503 143.548362874151 -0.610546095515353 0.203809508378262 -2.99567032163291 0.0027384232210324 0.0047300037454196 TR4859|c0_g1_i1 wt_37 wt_ph8 8.91205730249659 1.28188505334354 5.09697117792006 2.79846628921536 0.94330374949058 2.96666507551426 0.00301048704228199 0.00497384815681373 TR1678|c0_g1_i1 wt_37 wt_ph8 0.738899982352077 7.85275634721875 4.29582816478541 -3.47431884008145 1.21198503063676 -2.8666351087324 0.00414861034620891 0.00656863304816411 TR3807|c0_g1_i1 wt_37 wt_ph8 4.23896204531587 0.352255997713617 2.29560902151474 3.60257127355045 1.494771199452 2.41011552461755 0.0159474699414716 0.0242401543110368 TR1859|c3_g1_i1 wt_37 wt_ph8 0.361569353912422 2.25550826604853 1.30853880998047 -2.58650633406891 1.68391965639604 -1.53600340980911 0.124537544060973 0.181135380859874 TR3249|c0_g1_i1 wt_37 wt_ph8 1.36481976577862 4.37661229401476 2.87071602989669 -1.67837058189371 1.10474169040967 -1.51924254915312 0.128701454821489 0.181135380859874 TR2090|c0_g1_i1 wt_37 wt_ph8 0 5.87877087384675 2.93938543692337 -4.93100736412615 3.57047444665656 -1.38105101655149 0.167263275059569 0.227000159009415 TR1982|c2_g1_i1 wt_37 wt_ph8 7.00144976454503 11.520013112092 9.26073143831853 -0.727260398375605 0.567300823658433 -1.28196605406919 0.199854554547713 0.261878381821141 TR1837|c2_g1_i1 wt_37 wt_ph8 0.377330628439655 1.67813520813222 1.02773291828594 -2.14007669057536 1.85335822648042 -1.15470212935544 0.248212427250958 0.314402407851213 TR5212|c0_g1_i1 wt_37 wt_ph8 80.2050001877881 94.8352723753388 87.5201362815635 -0.236625075567937 0.216144030335029 -1.09475646956875 0.273623341840839 0.335409257740383 TR3854|c0_g1_i1 wt_37 wt_ph8 1925.26464813324 2107.16376011081 2016.21420412203 -0.130625245556186 0.130881633584188 -0.998041069468797 0.318259444082749 0.377933089848265 TR2844|c0_g1_i1 wt_37 wt_ph8 193.030766468894 213.82243412349 203.426600296192 -0.144061748535941 0.171730922251619 -0.838880654963595 0.401536284440309 0.450271927171227 TR1122|c0_g1_i1 wt_37 wt_ph8 1.69354093201913 0.660517838352177 1.17702938518565 1.39462173786331 1.66721495733336 0.83649785633758 0.402874882205835 0.450271927171227 TR2011|c5_g1_i1 wt_37 wt_ph8 6.84875389533898 4.81927837273561 5.8340161340373 0.483956961494249 0.73923753588747 0.654670438120068 0.512679962329314 0.556623959100398 TR2182|c3_g2_i6 wt_37 wt_ph8 2.76248771922916 1.94482465855284 2.353656188891 0.516404389322082 1.10366040723296 0.467901526536394 0.639855011782969 0.675402512437579 TR3788|c0_g1_i1 wt_37 wt_ph8 23.7579432209456 26.0024682525169 24.8802057367313 -0.125340757750782 0.352879389384873 -0.35519432849074 0.72244401329073 0.741969527163452 TR939|c0_g1_i1 wt_37 wt_ph8 103.002135647151 102.820214322362 102.911174984756 0.000973457550311695 0.195891269167832 0.00496937691223835 0.996035027203895 0.996035027203895