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view test-data/Araport11_subset.gff3 @ 0:206a71a69161 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tximport commit 66c3b86403faa115751332ea8e0383e26b9ee599"
author iuc
date Wed, 04 Dec 2019 05:57:26 -0500
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Chr1	Araport11	gene	3631	5899	.	+	.	ID=AT1G01010;Alias=ANAC001,NAC domain containing protein 1;symbol=NAC001;tid=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	mRNA	3631	5899	.	+	.	ID=AT1G01010.1;Parent=AT1G01010;Name=AT1G01010.1;gene_id=AT1G01010
Chr1	Araport11	exon	3631	3913	.	+	.	ID=AT1G01010.1:exon:1;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	five_prime_UTR	3631	3759	.	+	.	ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	exon	3996	4276	.	+	.	ID=AT1G01010.1:exon:2;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	exon	4486	4605	.	+	.	ID=AT1G01010.1:exon:3;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	exon	4706	5095	.	+	.	ID=AT1G01010.1:exon:4;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	exon	5174	5326	.	+	.	ID=AT1G01010.1:exon:5;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	exon	5439	5899	.	+	.	ID=AT1G01010.1:exon:6;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	five_prime_UTR	3759	5439	.	+	.	ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	three_prime_UTR	5631	5899	.	+	.	ID=AT1G01010.1:three_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010
Chr1	Araport11	gene	6788	9130	.	-	.	ID=AT1G01020;symbol=ARV1;tid=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	9130	.	-	.	ID=AT1G01020.5;Parent=AT1G01020;Name=AT1G01020.5;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.5:exon:1;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	6914	.	-	.	ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7232	.	-	.	ID=AT1G01020.5:exon:2;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7384	7450	.	-	.	ID=AT1G01020.5:exon:3;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.5:exon:4;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7762	7835	.	-	.	ID=AT1G01020.5:exon:5;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7942	7987	.	-	.	ID=AT1G01020.5:exon:6;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8325	.	-	.	ID=AT1G01020.5:exon:7;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8417	8464	.	-	.	ID=AT1G01020.5:exon:8;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6914	8417	.	-	.	ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8420	8464	.	-	.	ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8594	9130	.	-	.	ID=AT1G01020.5:exon:9;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8594	9130	.	-	.	ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	9130	.	-	.	ID=AT1G01020.4;Parent=AT1G01020;Name=AT1G01020.4;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.4:exon:1;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	6914	.	-	.	ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7232	.	-	.	ID=AT1G01020.4:exon:2;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7384	7450	.	-	.	ID=AT1G01020.4:exon:3;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.4:exon:4;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7762	7835	.	-	.	ID=AT1G01020.4:exon:5;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7942	7987	.	-	.	ID=AT1G01020.4:exon:6;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8464	.	-	.	ID=AT1G01020.4:exon:7;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6914	8236	.	-	.	ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8443	8464	.	-	.	ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8594	9130	.	-	.	ID=AT1G01020.4:exon:8;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8594	9130	.	-	.	ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	9130	.	-	.	ID=AT1G01020.3;Parent=AT1G01020;Name=AT1G01020.3;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.3:exon:1;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	6914	.	-	.	ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7232	.	-	.	ID=AT1G01020.3:exon:2;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7384	7450	.	-	.	ID=AT1G01020.3:exon:3;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.3:exon:4;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7762	7835	.	-	.	ID=AT1G01020.3:exon:5;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7942	7987	.	-	.	ID=AT1G01020.3:exon:6;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8464	.	-	.	ID=AT1G01020.3:exon:7;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6914	8236	.	-	.	ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8443	8464	.	-	.	ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8571	9130	.	-	.	ID=AT1G01020.3:exon:8;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8571	9130	.	-	.	ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	9130	.	-	.	ID=AT1G01020.1;Parent=AT1G01020;Name=AT1G01020.1;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.1:exon:1;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	6914	.	-	.	ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7232	.	-	.	ID=AT1G01020.1:exon:2;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7384	7450	.	-	.	ID=AT1G01020.1:exon:3;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.1:exon:4;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7762	7835	.	-	.	ID=AT1G01020.1:exon:5;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7942	7987	.	-	.	ID=AT1G01020.1:exon:6;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8325	.	-	.	ID=AT1G01020.1:exon:7;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8417	8464	.	-	.	ID=AT1G01020.1:exon:8;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8571	9130	.	-	.	ID=AT1G01020.1:exon:9;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6914	8571	.	-	.	ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8667	9130	.	-	.	ID=AT1G01020.1:three_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	8737	.	-	.	ID=AT1G01020.2;Parent=AT1G01020;Name=AT1G01020.2;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.2:exon:1;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	7069	.	-	.	ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7450	.	-	.	ID=AT1G01020.2:exon:2;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	7157	7314	.	-	.	ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.2:exon:3;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7762	7835	.	-	.	ID=AT1G01020.2:exon:4;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7942	7987	.	-	.	ID=AT1G01020.2:exon:5;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8325	.	-	.	ID=AT1G01020.2:exon:6;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8417	8464	.	-	.	ID=AT1G01020.2:exon:7;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8571	8737	.	-	.	ID=AT1G01020.2:exon:8;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	7314	8571	.	-	.	ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8667	8737	.	-	.	ID=AT1G01020.2:three_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	mRNA	6788	8737	.	-	.	ID=AT1G01020.6;Parent=AT1G01020;Name=AT1G01020.6;gene_id=AT1G01020
Chr1	Araport11	exon	6788	7069	.	-	.	ID=AT1G01020.6:exon:1;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	6788	7069	.	-	.	ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7157	7450	.	-	.	ID=AT1G01020.6:exon:2;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	7157	7314	.	-	.	ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	7564	7649	.	-	.	ID=AT1G01020.6:exon:3;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8236	8325	.	-	.	ID=AT1G01020.6:exon:4;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8417	8464	.	-	.	ID=AT1G01020.6:exon:5;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	five_prime_UTR	7314	8417	.	-	.	ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8420	8464	.	-	.	ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	exon	8594	8737	.	-	.	ID=AT1G01020.6:exon:6;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	three_prime_UTR	8594	8737	.	-	.	ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020
Chr1	Araport11	gene	11649	13714	.	-	.	ID=AT1G01030;symbol=NGA3;full_name=NGATHA3;tid=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	mRNA	11649	13714	.	-	.	ID=AT1G01030.1;Parent=AT1G01030;Name=AT1G01030.1;gene_id=AT1G01030
Chr1	Araport11	exon	11649	13173	.	-	.	ID=AT1G01030.1:exon:1;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	five_prime_UTR	11649	11863	.	-	.	ID=AT1G01030.1:five_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	three_prime_UTR	12941	13173	.	-	.	ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	exon	13335	13714	.	-	.	ID=AT1G01030.1:exon:2;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	three_prime_UTR	13335	13714	.	-	.	ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	mRNA	11649	13714	.	-	.	ID=AT1G01030.2;Parent=AT1G01030;Name=AT1G01030.2;gene_id=AT1G01030
Chr1	Araport11	exon	11649	12354	.	-	.	ID=AT1G01030.2:exon:1;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	five_prime_UTR	11649	11863	.	-	.	ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	exon	12424	13173	.	-	.	ID=AT1G01030.2:exon:2;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	five_prime_UTR	11863	12424	.	-	.	ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	three_prime_UTR	12941	13173	.	-	.	ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	exon	13335	13714	.	-	.	ID=AT1G01030.2:exon:3;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030
Chr1	Araport11	three_prime_UTR	13335	13714	.	-	.	ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030