Mercurial > repos > iuc > ucsc_chainnet

annotate test-data/query.1200.net @ 1:5b65a92be96c draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ucsc_tools/ucsc_chainnet commit 89f973d7c4d89281b2773768202459b31a114087
author iuc
date Mon, 30 Jun 2025 10:51:06 +0000
parents 3a213e01bc7f
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
1 ##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
2 ##gapPenalties=axtChain O=400 E=30
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
3 net mm39.chr2:136351215-137822786 1471571
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
4 fill 42266 172 hg38.chr20:10004760-11615810 + 49202 176 id 13 score 4568 ali 172
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
5 fill 87101 168 hg38.chr20:10004760-11615810 + 87669 167 id 7 score 6916 ali 167
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
6 fill 87751 136 hg38.chr20:10004760-11615810 + 84589 137 id 6 score 6961 ali 136
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
7 fill 158262 69 hg38.chr20:10004760-11615810 + 148667 69 id 15 score 2152 ali 68
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
8 fill 189050 37 hg38.chr20:10004760-11615810 + 195952 38 id 20 score 1248 ali 36
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
9 fill 189780 50 hg38.chr20:10004760-11615810 + 195854 50 id 18 score 1336 ali 50
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
10 fill 244295 318 hg38.chr20:10004760-11615810 - 266744 261 id 3 score 13332 ali 256
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
11 gap 244343 47 hg38.chr20:10004760-11615810 - 266919 70
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
12 fill 258580 88 hg38.chr20:10004760-11615810 + 288132 88 id 9 score 5958 ali 88
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
13 fill 260289 312 hg38.chr20:10004760-11615810 + 288278 276 id 4 score 9256 ali 268
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
14 fill 260754 161 hg38.chr20:10004760-11615810 + 288114 161 id 5 score 8091 ali 161
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
15 fill 364812 49 hg38.chr20:10004760-11615810 + 398052 55 id 19 score 1280 ali 48
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
16 fill 409807 23 hg38.chr20:10004760-11615810 + 469454 23 id 16 score 1838 ali 23
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
17 fill 516292 70 hg38.chr20:10004760-11615810 + 580524 105 id 22 score 1201 ali 70
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
18 fill 546215 130 hg38.chr20:10004760-11615810 + 600994 130 id 8 score 5978 ali 130
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
19 fill 579921 120 hg38.chr20:10004760-11615810 + 640387 120 id 14 score 3681 ali 120
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
20 fill 722616 101 hg38.chr20:10004760-11615810 + 796556 102 id 10 score 5873 ali 101
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
21 fill 722717 82 hg38.chr20:10004760-11615810 + 796671 81 id 17 score 1399 ali 73
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
22 fill 821044 1970 hg38.chr20:10004760-11615810 - 879848 2177 id 2 score 64329 ali 1889
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
23 fill 824476 150 hg38.chr20:10004760-11615810 - 890884 148 id 11 score 5421 ali 148
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
24 fill 1062631 89 hg38.chr20:10004760-11615810 + 1121156 98 id 21 score 1208 ali 87
3a213e01bc7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/ucsc_chainnet commit 09ce055ec6cd95f6999cc680a707418cee25d42a
iuc
parents:
diff changeset
25 fill 1342678 120 hg38.chr20:10004760-11615810 + 1425778 120 id 12 score 4864 ali 120