Mercurial > repos > iuc > ucsc_chainswap

comparison test-data/out.chain @ 0:6a7085c7777e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ucsc_tools/ucsc_chainswap commit b01ca34a85a25cf8fd38bdc005dc2e00d33a2d17
author iuc
date Sun, 25 Jan 2026 16:17:31 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:6a7085c7777e
1 chain 64329 mm39.chr2:136351215-137822786 1471571 + 821044 823014 hg38.chr20:10004760-11615810 1611050 - 729025 731202 2
2 29 3 0
3 4 0 17
4 68 0 3
5 29 0 1
6 39 2 0
7 24 0 1
8 34 0 2
9 28 0 3
10 5 0 11
11 26 0 1
12 45 0 27
13 8 0 11
14 50 0 2
15 20 0 21
16 42 0 1
17 20 0 1
18 27 1 0
19 10 0 3
20 115 0 1
21 12 1 0
22 54 0 1
23 42 0 2
24 46 0 10
25 64 0 4
26 27 1 0
27 21 7 0
28 6 1 0
29 5 1 0
30 35 0 5
31 88 3 0
32 8 14 0
33 8 13 0
34 125 2 0
35 28 0 1
36 18 0 17
37 30 0 1
38 51 7 0
39 74 4 0
40 16 0 1
41 61 0 2
42 37 0 2
43 19 0 77
44 43 0 9
45 12 0 19
46 4 0 4
47 14 4 0
48 25 0 14
49 78 9 0
50 6 1 0
51 63 0 1
52 24 6 0
53 46 0 12
54 52 1 0
55 24
56
57 chain 13332 mm39.chr2:136351215-137822786 1471571 + 244295 244613 hg38.chr20:10004760-11615810 1611050 - 1344045 1344306 3
58 16 1 0
59 31 47 0
60 39 0 3
61 42 0 2
62 111 14 0
63 17
64
65 chain 9256 mm39.chr2:136351215-137822786 1471571 + 260289 260601 hg38.chr20:10004760-11615810 1611050 + 288278 288554 4
66 34 0 8
67 38 2 0
68 9 17 0
69 11 24 0
70 15 1 0
71 161
72
73 chain 8091 mm39.chr2:136351215-137822786 1471571 + 260754 260915 hg38.chr20:10004760-11615810 1611050 + 288114 288275 5
74 161
75
76 chain 6961 mm39.chr2:136351215-137822786 1471571 + 87751 87887 hg38.chr20:10004760-11615810 1611050 + 84589 84726 6
77 83 0 1
78 53
79
80 chain 6916 mm39.chr2:136351215-137822786 1471571 + 87101 87269 hg38.chr20:10004760-11615810 1611050 + 87669 87836 7
81 58 1 0
82 109
83
84 chain 5978 mm39.chr2:136351215-137822786 1471571 + 546215 546345 hg38.chr20:10004760-11615810 1611050 + 600994 601124 8
85 130
86
87 chain 5958 mm39.chr2:136351215-137822786 1471571 + 258580 258668 hg38.chr20:10004760-11615810 1611050 + 288132 288220 9
88 88
89
90 chain 5873 mm39.chr2:136351215-137822786 1471571 + 722616 722717 hg38.chr20:10004760-11615810 1611050 + 796556 796658 10
91 31 0 1
92 70
93
94 chain 5421 mm39.chr2:136351215-137822786 1471571 + 824476 824626 hg38.chr20:10004760-11615810 1611050 - 720018 720166 11
95 123 2 0
96 25
97
98 chain 4864 mm39.chr2:136351215-137822786 1471571 + 1342678 1342798 hg38.chr20:10004760-11615810 1611050 + 1425778 1425898 12
99 120
100
101 chain 4568 mm39.chr2:136351215-137822786 1471571 + 42266 42438 hg38.chr20:10004760-11615810 1611050 + 49202 49378 13
102 99 0 4
103 73
104
105 chain 3681 mm39.chr2:136351215-137822786 1471571 + 579921 580041 hg38.chr20:10004760-11615810 1611050 + 640387 640507 14
106 120
107
108 chain 2152 mm39.chr2:136351215-137822786 1471571 + 158262 158331 hg38.chr20:10004760-11615810 1611050 + 148667 148736 15
109 10 0 1
110 38 1 0
111 20
112
113 chain 1838 mm39.chr2:136351215-137822786 1471571 + 409807 409830 hg38.chr20:10004760-11615810 1611050 + 469454 469477 16
114 23
115
116 chain 1399 mm39.chr2:136351215-137822786 1471571 + 722717 722799 hg38.chr20:10004760-11615810 1611050 + 796671 796752 17
117 30 0 5
118 8 0 3
119 27 9 0
120 8
121
122 chain 1336 mm39.chr2:136351215-137822786 1471571 + 189780 189830 hg38.chr20:10004760-11615810 1611050 + 195854 195904 18
123 50
124
125 chain 1280 mm39.chr2:136351215-137822786 1471571 + 364812 364861 hg38.chr20:10004760-11615810 1611050 + 398052 398107 19
126 11 0 1
127 7 1 0
128 15 0 6
129 15
130
131 chain 1248 mm39.chr2:136351215-137822786 1471571 + 189050 189087 hg38.chr20:10004760-11615810 1611050 + 195952 195990 20
132 22 0 2
133 5 1 0
134 9
135
136 chain 1208 mm39.chr2:136351215-137822786 1471571 + 1062631 1062720 hg38.chr20:10004760-11615810 1611050 + 1121156 1121254 21
137 9 1 0
138 12 0 7
139 12 0 4
140 13 1 0
141 41
142
143 chain 1201 mm39.chr2:136351215-137822786 1471571 + 516292 516362 hg38.chr20:10004760-11615810 1611050 + 580524 580629 22
144 14 0 3
145 16 0 19
146 19 0 13
147 21
148
149 chain 1170 mm39.chr2:136351215-137822786 1471571 + 737566 737588 hg38.chr20:10004760-11615810 1611050 + 806859 806881 23
150 22
151
152 chain 1030 mm39.chr2:136351215-137822786 1471571 + 1423235 1423249 hg38.chr20:10004760-11615810 1611050 + 1532147 1532161 24
153 14
154
155 chain 1012 mm39.chr2:136351215-137822786 1471571 + 345076 345108 hg38.chr20:10004760-11615810 1611050 + 361832 361870 25
156 20 0 6
157 12
158