Mercurial > repos > iuc > ucsc_maftoaxt

annotate test-data/1.axt @ 0:3a4256d4f079 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
author iuc
date Wed, 31 Jul 2024 14:29:16 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
1 0 hg17.chr7 127471196 127471526 panTro1.chr6 129885077 129885407 + 60426
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
2 gtttgccatcttttgctgctctagggaatccagcagctgtcaccatgtaaacaagcccaggctagaccaGTTACCCTCATCATCTTAGCTGATAGCCAGCCAGCCACCACAGGCAtgagtcaggccatattgctggacccacagaattatgagctaaataaatagtcttgggttaagccactaagttttaggcatagtgtgttatgtaTCTCACAAACATATAAGACTGTGTGTTTGTTGACTGGAGGAAGAGATGCTATAAAGACCACCTTTTAAAACTTCCC-------------------------------AAATACT-GCCACTGATGTCCTG-----ATGGAGGTA-------TGAA-------------------AACATCCACTAA
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
3 gtttgccatcttttgctgctcttgggaatccagcagctgtcaccatgtaaacaagcccaggctagaccaGTTACCCTCATCATCTTAGCTGATAGCCAGCCAGCCACCACAGGCAtgagtcaggccatattgctggacccacagaattatgagctaaataaatagtcttgggttaagccactaagttttaggcatagtgtgttatgtaTCTCACAAACATATAAGACTGTGTGTTTGTTGACTGGAGGAAGAGATGCTATAAAGACCACCTTTTGAAACTTCCC-------------------------------AAATACT-GCCACTGATGTCCTG-----ATGGAGGTA-------TGAA-------------------AACATCCACTAA
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
4
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
5 1 hg17.chr7 127471527 127471584 panTro1.chr6 129885408 129885465 + 8157
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
6 AATTTGTGGTTTATTCATTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGG
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
7 AATTTGTGGTTTATTCGTTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGG
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
8
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
9 2 hg17.chr7 127471585 127471688 panTro1.chr6 129885466 129885569 + 43613
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
10 GAGATATTTGGggaaatt---ttgtatagactagctttcacgatgttagggaattattattgtgtgataatggtcttgcagttaca-cagaaattcttccttattttt
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
11 GAGACATTTGGggaaatt---ttgtatagactagctttcacgatgttagggagttattattgtgtgataatggtcttgcagttaca-cagaaattcttccttattttt
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
12
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
13 3 hg17.chr7 127471689 127471871 panTro1.chr6 129885570 129885752 + 63217
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
14 tgggaa---gcaccaaag----tagggat---aaaatgtcatgatgtgtgcaatacactttaaaatgtttttg-----ccaaaataatt----------------aatgaagc--aaatatggaaa-ataataattattaaatctaggtgatgggtatattgtagttcactatagtattgcacacttttctgtatgtttaaatttttcatttaaaaa
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
15 tgggaa---acaccaaag----tagggat---aaaatgtcatgatgtgtgcaatacgctttaaaatatttttg-----ccaaaataatt----------------aatgaagc--aaatatggaaa-ataataattattaaatctaggtgatgggtatattgtagttcactatagtattgcacacttttctgtatgtttaaaattttcatttaaaaa
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
16
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
17 4 hg17.chr7 127471873 127471912 panTro1.chr6 129885754 129885793 + 8913
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
18 ctttgagc-----tagacaccaggctatgagctaggagcatagca
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
19 ctttgagc-----tagacaccaggctatgagctaggagcatagca
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
20
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
21 5 hg17.chr7 127471913 127472247 panTro1.chr6 129885794 129886128 + 91878
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
22 atgaccaa----------------------------------------------------------------------------------------------atagactcctaccaa--------------------------------------------------ctc-aaagaatgcacattctCTGGGAAACATGTTTCCATTAGGAAGCCTCGAATGCAATGTGACTGTGGTCTCCAGGACCTG-TGTGATCCTGGCTTTTCCTGTTCCCTCCG---CATCATCACTGCAGGTGTGTTTTCCCAAGTTTTAAACATTTA------CCTTCCCAGTGGCCTTGCGTCTAGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTCTATGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaattttccctg-ggcacccatgtgttcttggcactggaaaagtaccggga
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
23 atgaccaa----------------------------------------------------------------------------------------------atagactcctaccaa--------------------------------------------------ctc-aaagaatgcacattctCTGGGAAACATGTTTCCATTAGGAAGCCTCGAATGCAATGTGACTGTGGTCTCCAGGACATG-TGTGATCCTGGCTTTTCCTGTTCCCTCTG---CATCATCACTGCAGGTGTATTTTCCCAAGTTTTAAACATTTA------CCTTCCCAGTGGCCTTGCGTCTAGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTCTATGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaatttttcctg-ggcacccatgtgttcttggcactggaaaagtaccggga
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
24
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
25 6 hg17.chr7 127472259 127472681 panTro1.chr6 129886140 129886562 + 82819
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
26 gatggccca-atccctgtcctct---taaaacctaagggaggagaTGGAAAGGGG-CACCCAACCCAGACTGAGAGACAGGAATTAGCTGCAAGGGGAACTAGGAAAAGCTTCTTTA---AGGATGGAGAGGCCCTAGTGGAAT-GGGGAGATTCTTCCGGGAGAAGCGATGGATGCACAGTTGGGCATCCCCACAGACGGACTGGAAAGAAAAAAGGCCTGGAGGAATCAATGTG-------CAATGTATGTGTGTTCCCTGGTTcaagggctgg-gaactttctcta-aagggccaggtagaaaacattttaggctttctaagccaag--gcaaaat-tgaggatattacatgggtacttatacaacaagaataaacaatt---tacacaattttttgttgacagaattcaaaactttat----agacacagaaatgcaaatttcctgt
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
27 gatggccca-atccctgtcctct---taaaacctaagggaggagaTGGAAAGGGG-CACCCAACCCAGACTGAGAGACAGGAATTAGCTGCAAGGGGAACTAGGAAAAGCTTCTTTA---AGGATGGAGAGACCCTAGTGGAAT-GGGGAGATTCTTCCGGGAGAAGCGATGGATGCGCAGTTGGGCATCCCCACAGACGGACTGGAAAGAAAAAAGGCCTGGAGGAATCAATGTG-------CAATGTATGTGTGTTCCCTGGTTcaagggctgg-gaactttctcta-aagggccaggtagaaaacattttaggctttctaagccaag--gcaaaat-tgaggatattacatgggtacttatacaacaagaataaacaatt---tacacaattttttgttgacagaattcaaaactttat----agacacagaaatgtaaatttcctgt
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
28
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
29 7 hg17.chr7 127473810 127473906 panTro1.chr6 129887687 129887783 + 15522
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
30 tttttttttcaaacttttacaaatgtagaaaccattcttagcttttgggcattaccaaacccggcagtgg-caggctcggttcaccaacgtcatttgc
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
31 tttttttttcaaacttttacaaatgtagaaaccattcttagcttttgggcattaccaaacccggcagtgg-AAGGCTCGGTTCACCAACATCATTTGC
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
32
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
33 8 hg17.chr7 127473907 127474237 panTro1.chr6 129887784 129888101 + 28088
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
34 agttccccgCTTTATGTTATGGgttttgttttgttttgtttttttt-attgagacagagtttcactcttgttgcccaggctgtagtgcaatggtctgatcttggctcactgcaacctccacttcccaggttcaagccattctcctgcctcagcctctcaagtagctgggattacagacactcaccaccacacctggctaattttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaaatcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcttgagctaccacgcctggct
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
35 AGTTCCCCGCTTTATATTATGGGttttttttttttttttttttttttattgagacagagtttcactcttgttgcccaggctgtagtg--------------tggctcactgcaacctccacttcccaggttcaagccattctcctgcctcagcctctcaagtagctgggattacagacactcaccaccacacctggctaattttgtatttttagtagagatgaggtttcatcatgttggccaggctggtctcgaaatcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcttgagctaccacgcctggct
3a4256d4f079 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/maftoaxt commit f12613ba8034a78d45054ec07a7cd6853dbb62aa
iuc
parents:
diff changeset
36