Mercurial > repos > iuc > umi_tools_dedup
comparison umi-tools_dedup.xml @ 10:c6567483aa1e draft
"planemo upload commit 6ba769440f8f6a62e9ebfac069a30edc541bac0a"
| author | iuc |
|---|---|
| date | Thu, 05 Dec 2019 01:32:18 -0500 |
| parents | 1692b1acebfd |
| children | 7fa28eb10fed |
comparison
equal
deleted
inserted
replaced
| 9:1692b1acebfd | 10:c6567483aa1e |
|---|---|
| 2 <description>Extract UMI from fastq files</description> | 2 <description>Extract UMI from fastq files</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements"> | 6 <expand macro="requirements"> |
| 7 <requirement type="package" version="1.6">samtools</requirement> | 7 <requirement type="package" version="1.9">samtools</requirement> |
| 8 </expand> | 8 </expand> |
| 9 <command detect_errors="exit_code"><![CDATA[ | 9 <command detect_errors="exit_code"><![CDATA[ |
| 10 #if $input.is_of_type("sam"): | 10 #if $input.is_of_type("sam"): |
| 11 #set $input_file = $input | 11 #set $input_file = $input |
| 12 #else: | 12 #else: |