# HG changeset patch # User iuc # Date 1528242240 14400 # Node ID 10c037f6d0d11a433b6c186cf9e79b34785ed783 # Parent 7d886fe41f564e6188630d920204820ff9756a9f planemo upload commit 57e3e460a740aa7aad217c8365527c49e88c9a30 diff -r 7d886fe41f56 -r 10c037f6d0d1 test-data/scrb_extract.fastq.gz Binary file test-data/scrb_extract.fastq.gz has changed diff -r 7d886fe41f56 -r 10c037f6d0d1 test-data/scrb_seq_barcodes --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/scrb_seq_barcodes Tue Jun 05 19:44:00 2018 -0400 @@ -0,0 +1,384 @@ +AAAACT +GCTAGA +AAAATC +GCTTAC +AAACAT +GGACAT +AAACTA +GGCAAT +AAAGTT +GGGATT +AAATAC +GTACAC +AAATCA +GTCAAG +AAATGT +GTGACT +AAATTG +GTTCGA +AACAAT +TAGTGG +AACATA +TCCAAC +AACTAA +TCGAAG +AAGATT +TCTGCA +AAGTAT +TTCCTC +AAGTTA +TTGTCC +AATAAC +TTTGGC +AATACA +CCAACC +AATAGT +CCTTCC +AATATG +CTCTCC +AATCAA +GGACCA +AATCTT +GTACCG +AATGAT +ACCCCC +AATGTA +ACCCGG +AATTAG +ACCGCG +AATTCT +ACCGGC +AATTGA +ACGCCG +AATTTC +ACGCGC +ACAAAT +ACGGCC +ACAATA +ACGGGG +ACATAA +AGCCCG +ACTAAA +AGCCGC +ACTATT +AGCGCC +ACTTAT +AGCGGG +ACTTTA +AGGCCC +AGAATT +AGGCGG +AGATAT +AGGGCG +AGATTA +AGGGGC +AGTAAT +CACCCC +AGTATA +CACCGG +AGTTAA +CACGCG +ATAAAC +CACGGC +ATAACA +CAGCCG +ATAAGT +CAGCGC +ATAATG +CAGGCC +ATACAA +CAGGGG +ATACTT +CCACCG +ATAGAT +CCACGC +ATAGTA +CCAGGG +ATATAG +CCCACG +ATATCT +CCCAGC +ATATGA +CCCCAC +ATATTC +CCCCCA +ATCAAA +CCCCGT +ATCATT +CCCCTG +ATCTAT +CCCGAG +ATCTTA +CCCGGA +ATGAAT +CCCTGG +ATGATA +CCGAGG +ATGTAA +CCGCAG +ATTAAG +CCGCGA +ATTACT +CCGGAC +ATTAGA +CCGGCA +ATTATC +CCGGGT +ATTCAT +CCGGTG +ATTCTA +CCGTCG +ATTGAA +CCGTGC +ATTGTT +CCTCGG +ATTTAC +CCTGCG +ATTTCA +CCTGGC +ATTTGT +CGACCC +ATTTTG +CGACGG +CAAAAT +CGAGCG +CAAATA +CGAGGC +CAATAA +CGCACC +CATAAA +CGCAGG +CATATT +CGCCAG +CATTAT +CGCCCT +CATTTA +CGCCGA +CTAAAA +CGCCTC +CTAATT +CGCGAC +CTATAT +CGCGCA +CTATTA +CGCGGT +CTTAAT +CGCGTG +CTTATA +CGCTCG +CTTTAA +CGCTGC +GAAATT +CGGACG +GAATAT +CGGAGC +GAATTA +CGGCAC +GATAAT +CGGCCA +GATATA +CGGCGT +GATTAA +CGGCTG +GTAAAT +CGGGAG +GTAATA +CGGGCT +GTATAA +CGGGGA +GTTAAA +CGGGTC +GTTATT +CGGTCC +GTTTAT +CGGTGG +GTTTTA +CGTCCG +TAAAAC +CGTCGC +TAAACA +CGTGCC +TAAAGT +CGTGGG +TAAATG +CTCCCG +TAACAA +CTCCGC +TAACTT +CTCGGG +TAAGAT +CTGCGG +TAAGTA +CTGGCG +TAATAG +CTGGGC +TAATCT +GACCCG +TAATGA +GACCGC +TAATTC +GACGCC +TACAAA +GACGGG +TACATT +GAGCCC +TACTAT +GAGCGG +TACTTA +GAGGCG +TAGAAT +GAGGGC +TAGATA +GCACCC +TAGTAA +GCACGG +TAGTTT +GCAGCG +TATAAG +GCAGGC +TATACT +GCCACC +TATAGA +GCCAGG +TATATC +GCCCAG +TATCAT +GCCCCT +TATCTA +GCCCGA +TATGAA +GCCCTC +TATGTT +GCCGAC +TATTAC +GCCGCA +TATTCA +GCCGGT +TATTGT +GCCGTG +TATTTG +GCCTCG +TCAAAA +GCCTGC +TCAATT +GCGACG +TCATAT +GCGAGC +TCATTA +GCGCAC +TCTAAT +GCGCCA +TCTATA +GCGCGT +TCTTAA +GCGCTG +TGAAAT +GCGGAG +TGAATA +GCGGCT +TGATAA +GCGGGA +TGATTT +GCGGTC +TGTAAA +GCGTCC +TGTATT +GCGTGG +TGTTAT +GCTCCG +TGTTTA +GCTCGC +TTAAAG +GCTGCC +TTAACT +GCTGGG +TTAAGA +GGACGC +TTAATC +GGAGCC +TTACAT +GGAGGG +TTACTA +GGCACG +TTAGAA +GGCAGC +TTAGTT +GGCCAC +TTATAC +GGCGAG +TTATCA +GGCGCT +TTATGT +GGCGGA +TTATTG +GGCGTC +TTCAAT +GGCTCC +TTCATA +GGGACC +TTCTAA +GGGAGG +TTGAAA +GGGCAG +TTGATT +GGGCCT +TTGTTA +GGGCGA +TTTAAC +GGGCTC +TTTACA +GGGGAC +TTTAGT +GGGGCA +TTTATG +GGGGGT +TTTCAA +GGGGTG +TTTCTT +GGGTCG +TTTGTA +GGGTGC +TTTTAG +GGTCCC +TTTTCT +GGTGCG +TTTTGA +GGTGGC +TCTTTC +GTCCCC +TTGGAT +GTCGCG +ACCGTA +GTCGGC +AGACCT +GTGCGC +AGGGAT +GTGGCC +ATCGAG +GTGGGG +CAAGCT +TCCCCG +CACCAA +TCCCGC +CAGTCA +TCCGGG +CATCAG +TCGCGG +CATGGT +TCGGCG +CCACAT +TCGGGC +CCGATT +TGCCCC +CGACTT +TGCGCG +CGATTG +TGCGGC +CTAGTG +TGGCCG +CTTCTG +TGGCGC +GAAGAC +TGGGCC +GATCGT +TGGGGG diff -r 7d886fe41f56 -r 10c037f6d0d1 test-data/scrb_seq_fastq.1.gz Binary file test-data/scrb_seq_fastq.1.gz has changed diff -r 7d886fe41f56 -r 10c037f6d0d1 test-data/scrb_seq_fastq.2.gz Binary file test-data/scrb_seq_fastq.2.gz has changed diff -r 7d886fe41f56 -r 10c037f6d0d1 test-data/t_R2.fastq --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/t_R2.fastq Tue Jun 05 19:44:00 2018 -0400 @@ -0,0 +1,400 @@ +@HISEQ:105:C2UE1ACXX:3:1101:11160:2245 2:N:0:CAGATC +CATAAAAACCAAAACTAACTAAACCCCAAATAAAAAACAACCTAACCTCTAACAAAAACAACAACAACTAACACCTCAAAATCAACTCTAAATAAAAACTA ++ +BBBFFFFFFFFFFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIFIIIIIIFFFFFFFFFFFFBFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF +@HISEQ:105:C2UE1ACXX:3:1101:19338:2197 2:N:0:CAGATC +CTAATTTCTATTACCTACCTAACAACTATAACTATAATACTAACAAAAAACAAACAACATAGACCTAAATCCTACTTATACCCAACATTCTAAAAACAATT ++ +BBBFFFFFFFFFFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII0