Mercurial > repos > iuc > usher
comparison test-data/test_18_all_paths.txt @ 0:524cb8f7a69a draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/usher commit c1531745ea5f5c4fbd22ad18e290b47fdcb01bb1"
| author | iuc |
|---|---|
| date | Tue, 11 May 2021 17:53:49 +0000 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:524cb8f7a69a |
|---|---|
| 1 1 | |
| 2 2 C24034T | |
| 3 England/BRIS-1853249/2020|20-04-02 C29518T | |
| 4 NPL/61-TW/2020|MT072688.1|20-01-13 | |
| 5 3 C875T | |
| 6 Wales/PHWC-25B04/2020|20-03-24 A20637G | |
| 7 Wales/LIVE-A6831/2020|20-03-16 T14859C | |
| 8 Scotland/EDB354/2020|20-03-30 C7423T,A29780C | |
| 9 5 C20270T | |
| 10 England/SHEF-BFF8B/2020|20-03-25 C1473T | |
| 11 England/SHEF-BFF21/2020|20-03-25 A18671G,A29683T | |
| 12 8 T4949C | |
| 13 England/SHEF-BFFC7/2020|20-03-25 G28027T | |
| 14 England/PHEC-1E01E/2020|20-04-03 C22445T | |
| 15 9 C29635T | |
| 16 DP0476/2020|LC571003.1|20-02-16 C29592T | |
| 17 DP0191/2020|LC570980.1|20-02-15 A3854G | |
| 18 10 C14805T,G26144T | |
| 19 11 T17247C | |
| 20 12 C12400T | |
| 21 Switzerland/100159/2020|LR884273.1|20-03-16 C16995T | |
| 22 England/LOND-126031F/2020|20-03-15 A20511G | |
| 23 13 C8078T | |
| 24 USA/NY-QDX-1999/2020|MW190795.1|20-03-16 G10754A | |
| 25 USA/NY-QDX-1969/2020|MW190709.1|20-03-15 | |
| 26 Scotland/CVR44/2020|20-03-13 G443A,A1587G | |
| 27 Scotland/CVR207/2020|20-03-18 C988T,G12832A | |
| 28 England/ALDP-9EE3AC/2020|20-05-06 G20991T,C23707T | |
| 29 England/CAMB-8042A/2020|20-04-10 A2480G,C2558T,A4015T | |
| 30 SouthKorea/KOR-BA-ACH_2719/2020|MT304476.1|20-02-29 G5572T,C28311T | |
| 31 28 C241T,C3037T,C14408T,A23403G | |
| 32 England/BRIS-125347/2020|20-03-27 G7042T,G8861T | |
| 33 IND/763/2020|MT577009.1|20 C4809T | |
| 34 31 G25429T | |
| 35 England/CAMB-76515/2020|20-03-29 C16289T,T25429G | |
| 36 England/LEED-2A8D10/2020|20-03-31 C13730T,C25916T | |
| 37 35 A10874G,C25916T,T26677C | |
| 38 36 G25440A,G29745T | |
| 39 Scotland/EDB2049/2020|20-04-18 T25916C | |
| 40 Scotland/EDB2100/2020|20-04-19 | |
| 41 England/CAMB-1AC7D3/2020|20-04-22 A13863G | |
| 42 38 G17278T,C19610T,T26906C,G29688T,G29757T | |
| 43 Scotland/CVR2381/2020|20-04-13 C1848T | |
| 44 Scotland/CVR2197/2020|20-04-11 G21776T | |
| 45 Scotland/CVR1519/2020|20-04-03 A6441G,A28841G | |
| 46 England/NORW-E8C37/2020|20-04-13 C3602T,C11460T,A24232G | |
| 47 43 G1589A,G29474T | |
| 48 Wales/PHWC-3122E/2020|20-04-10 A22457G | |
| 49 Wales/PHWC-1645EC/2020|20-05-10 A11438G | |
| 50 England/PHEC-127E8/2020|20-03-28 G21538T | |
| 51 England/CAMB-75BD8/2020|20-03-29 C18060T,G28514T | |
| 52 47 C25665T,G28325T | |
| 53 USA/MI-MDHHS-SC20612/2020|MT585039.1|20-04-29 C15540T | |
| 54 USA/MI-MDHHS-SC20597/2020|MT585043.1|20-04-29 G16075T | |
| 55 49 G3871T | |
| 56 USA/WI-UW-26/2020|MT706147.1|20-03-24 A29797G | |
| 57 USA/IL-QDX-2568/2020|MW191367.1|20-03-14 C19862T | |
| 58 USA/WI-UW-558/2020|MT750137.1|20-06-25 A696C | |
| 59 53 G25563T | |
| 60 54 C8389T | |
| 61 57 C601T,G12832T,G27915A | |
| 62 USA/COVID20-0537/2020|MT981422.1|20-06-04 C29503T | |
| 63 USA/COVID20-1129/2020|MW067826.1|20-07-10 A28165G | |
| 64 CHL/Santiago-PUC_MVL_0011/2020|MW365225.1|20-03-18 G1319A,G2945A,C10156T,T17208C | |
| 65 England/LEED-2A87C7/2020|20-04-03 G3230A,C23453T | |
| 66 EGY/CUNCI-HGC5I033/2020|MT614347.1|20-06-02 C1997T | |
| 67 61 C1059T | |
| 68 62 C24381T | |
| 69 USA/CA-CZB-1434/2020|MT628140.1|20-03-25 | |
| 70 USA/UT-UPHL-201016311/2020|MW181497.1|20-04-09 C23718T | |
| 71 63 C24442T | |
| 72 USA/VA-DCLS-0676/2020|MT911804.1|20-04 | |
| 73 USA/MI-QDX-476/2020|MW064508.1|20-03-23 | |
| 74 USA/MI-MDHHS-SC20587/2020|MT585026.1|20-04-29 T20037C,G28073T | |
| 75 67 T1059C,C1594T,C11109T | |
| 76 England/CAMB-7A7DF/2020|20-04-02 G8578A | |
| 77 Netherlands/NA_18/2020|LR878352.1|20-03-09 C23506T | |
| 78 68 C18555T,C28892T | |
| 79 USA/VA-DCLS-1557/2020|MW208010.1|20-08 C25207T | |
| 80 USA/FL-BPHL-1018/2020|MT966219.1|20-07-17 A6035G | |
| 81 72 A3103C,C5893T,G24368T,A28117T | |
| 82 England/CAMB-83FBD/2020|20-04-22 | |
| 83 England/CAMB-1AD004/2020|20-04-30 A28356G | |
| 84 Wales/PHWC-2E0A2/2020|20-04-10 C18568T,G24368T,C24621T | |
| 85 USA/WA-S2746/2020|MT947577.1|20-07-19 C2939T,C3736T,G7037A,C7732T,C25517T,C26110T,C28310T | |
| 86 USA/UT-05590/2020|MW084605.1|20-06-01 A2151G,G19542T,C23551T,C28821A | |
| 87 Netherlands/NA_588/2020|LR883860.1|20 G18281A,A20742G,A20755C,G25784T | |
| 88 86 C11916T | |
| 89 USA/NY-QDX-1993/2020|MW190794.1|20-03-18 G28376T | |
| 90 89 G26020T | |
| 91 USA/FL-BPHL-0321/2020|MT757040.1|20-04-16 T29128C | |
| 92 USA/FL-BPHL-1841/2020|MW206510.1|20-04-08 C4012T | |
| 93 90 G1186A,T4033C,C8986T,C25413T,C28674T,G28857T | |
| 94 USA/MN-MDH-1583/2020|MT997701.1|20-05-28 C8109T | |
| 95 USA/MN-MDH-1585/2020|MT997703.1|20-05-22 T12925C | |
| 96 91 C18998T,G29540A | |
| 97 USA/VA-DCLS-1147/2020|MT992749.1|20-04 A20553G,G22487C | |
| 98 USA/NY-QDX-2365/2020|MW191144.1|20-03-16 C28863T | |
| 99 USA/CA-CZB-2139/2020|MT750510.1|20-05-21 C5540A,C19145T | |
| 100 USA/NC-QDX-174/2020|MT786825.1|20-04-27 C10458T,C18693A,G26828T | |
| 101 England/MILK-6166F0/2020|20-07-05 C66A,C4455T,C7768T,A8773G,C17304T,T22912G,T24805C,C26270T | |
| 102 USA/SEARCH-0792-SAN/2020|MT811373.1|20-04-06 C13252T | |
| 103 103 C16650T,A20675T,G29179T,G29779T | |
| 104 KOR/YS006/2020|MW345824.1|20-06-04 C26261T | |
| 105 KOR/YS008/2020|MW345825.1|20-06-07 | |
| 106 USA/NMDOH-2020308468/2020|MW228235.1|20-08-24 A12820G,C16762T,A17637G,C20762T,C28887T | |
| 107 USA/CA-CZB-1793/2020|MT750334.1|20-04-16 C379A,A20503G | |
| 108 108 C27964T | |
| 109 109 C10319T,A18424G,C21304T,G25907T,C28472T,C28869T | |
| 110 USA/AK-PHL660/2020|MW173157.1|20-06-27 A16872C | |
| 111 USA/WI-UW-1194/2020|MT981478.1|20-08-11 G9928T,C10377T | |
| 112 USA/MN-QDX-981/2020|MW065078.1|20-03-15 C28833T | |
| 113 USA/CA-QDX-2685/2020|MW191430.1|20-03-17 C9967T,G17590T | |
| 114 117 G17808T | |
| 115 USA/MN-QDX-1328/2020|MW065415.1|20-03-15 C9693T | |
| 116 USA/TX-DSHS-1210/2020|MW246004.1|20-03-18 C15352T | |
| 117 118 C24378T | |
| 118 USA/UT-00495/2020|MT444543.1|20-04-02 G27717A | |
| 119 USA/UT-00353/2020|MT444564.1|20-03-27 T11131A | |
| 120 USA/IL-UW-1064/2020|MT929016.1|20-07-26 G4520T,A6442G,T6934C,C12374T,C14786T,T15624C,C25904T,C28099T,C28932T | |
| 121 USA/WI-UW-1119/2020|MT929068.1|20-07-27 A19899T,A21464G | |
| 122 123 T8788C,G26951A | |
| 123 England/CAMB-7771E/2020|20-03-30 C4586T | |
| 124 England/CAMB-7DC91/2020|20-04-05 C4321T | |
| 125 USA/TX-DSHS-1232/2020|MW309089.1|20-03-25 C7528T,G8213A | |
| 126 USA/MD-MDH-0071/2020|MT827237.1|20-05-25 C775T,C23683T,C27923T,G28975T | |
| 127 USA/WA-QDX-235/2020|MT806806.1|20-04-27 A12557C,A23534T | |
| 128 127 C1917T | |
| 129 USA/VA-DCLS-0426/2020|MT679166.1|20-05 C8327T | |
| 130 USA/VA-DCLS-0187/2020|MT450889.1|20-04 G29431T | |
| 131 USA/UT-QDX-2224/2020|MW191025.1|20-03-13 C23191T,A25910C | |
| 132 130 C10582T | |
| 133 Scotland/EDB2451/2020|20-04-23 C1076T,T10963A | |
| 134 Switzerland/240029/2020|LR880608.1|20-08-10 C3099T,G4960T,C4965T,C6070T,C7303T,C7564T,C10279T,C10301A,C10525T,G10688T,G11851T,C14230A,G21800T,T27622C,G27632T,C27804T,C28830A,G29402T,G29779T | |
| 135 134 C1302T,C1519T,A2526G,T3049C,G3689A,A11061G,C11747T,T13345C,A14774G,C15026T,G15438T,T16062C,G17334T,G17721T,G19962T,C25037T,C27945T,C28887T | |
| 136 England/RAND-12B3F28/2021|21-02-09 | |
| 137 England/RAND-12B3CF4/2021|21-02-09 | |
| 138 USA/MN-MDH-1596/2020|MT997714.1|20-05-12 T9070C,C20325T | |
| 139 England/LIVE-A91F7/2020|20-03-25 T13006C,C19186T,C25688T | |
| 140 146 G3892T | |
| 141 USA/MA_MGH_00458/2020|MT520347.1|20-04-04 G26787A | |
| 142 USA/MA_MGH_00445/2020|MT520273.1|20-04-01 G20062T | |
| 143 USA/NMDOH-2020126568/2020|MW006567.1|20-06-15 C16428T,C20555T,C21772T | |
| 144 USA/MN-MDH-1464/2020|MT919997.1|20-03-24 C3044T,G25523T,T27869C | |
| 145 152 C66T,C17069T,C26801T | |
| 146 USA/MD-MDH-0129/2020|MT937319.1|20-07-08 C13761T | |
| 147 USA/TX-DSHS-1524/2020|MW349179.1|20-06-23 A26864T | |
| 148 USA/WA-UW-6327/2020|MT412324.1|20-04-02 C5240G,C26625T | |
| 149 154 C27847T | |
| 150 USA/MI-QDX-371/2020|MW064412.1|20-03-23 A2948G | |
| 151 USA/MI-QDX-298/2020|MW064340.1|20-03-21 C6628T | |
| 152 USA/TX-QDX-261/2020|MT806804.1|20-05-01 T8041C,C18029T,G22225T | |
| 153 USA/TX-DSHS-0675/2020|MW093567.1|20-07-16 C335T,G526C,T16425G | |
| 154 USA/WI-UW-994/2020|MT846680.1|20-07-20 T6905G,C13994T,C17518T,G21724T,G23120T,C25667T | |
| 155 England/BRIS-127AD7/2020|20-04-16 C1968T,G3638T,G28808T,G29434C,G29705T | |
| 156 USA/WI-UW-522/2020|MT750102.1|20-06-24 C5310T,C12294T,C25511T | |
| 157 USA/DC-HP00089/2020|MT509482.1|20-03-31 C9510T,C11919T | |
| 158 USA/IL-UW-1065/2020|MT929017.1|20-04-20 C5183T,G28878T | |
| 159 164 C25976A | |
| 160 USA/MI-QDX-620/2020|MW064645.1|20-03-17 G3091A | |
| 161 USA/MI-QDX-595/2020|MW064630.1|20-03-18 C18981T | |
| 162 165 C7851T,C20233T | |
| 163 England/BRIS-12D9F2/2020|20-05-06 A20262G | |
| 164 England/BRIS-12B156/2020|20-05-08 A13707G | |
| 165 USA/WA-QDX-2548/2020|MW191307.1|20-03-16 C25572T,G29747T | |
| 166 USA/COVID20-1144/2020|MW067817.1|20-07-10 G2286A,A4197G,G7954T,A10552G,T25577G,A28715T | |
| 167 USA/UT-UPHL-201023823/2020|MW181538.1|20-06-01 C823T,A2466G,C4084T,C6196T,G10753A,G11365A,C17145T,G26730T,G27955A,C28854T | |
| 168 172 C1887T | |
| 169 USA/CA-QDX-2032/2020|MW190749.1|20-03-17 G533A | |
| 170 USA/CA-QDX-2576/2020|MW191310.1|20-03-16 A27979T | |
| 171 Wales/PHWC-26B12/2020|20-03-29 C829T,G28371T | |
| 172 USA/NY-CDC-SURV0162NYC/2020|MT434788.1|20-03-09 T3037C,C10851T | |
| 173 USA/TX-DSHS-1428/2020|MW326536.1|20-06-23 C1734T,G12160T,C23664T | |
| 174 USA/TX-DSHS-0051/2020|MW039116.1|20-05-09 G1495T,T7332C,T7831A,G28845T | |
| 175 Northern_Ireland/NIRE-1021DD/2020|20-03-14 A6360G,G20709T | |
| 176 Scotland/EDB6052/2020|20-05-08 G18213T,A18818G | |
| 177 184 C9286T,G28899C | |
| 178 England/CAMB-7FBCF/2020|20-04-16 A12556G | |
| 179 England/CAMB-784BC/2020|20-04-06 A13852G | |
| 180 B90|LR898037.1|? C6406T,G18972A,A21360C | |
| 181 ISR/hCov-19-Israel-CVL-n3304/2020|MW672627.1|20-03-09 G7295T,C28290T | |
| 182 191 C2416T | |
| 183 USA/FL-BPHL-1462/2020|MW040672.1|20-04-20 G26233T,C27881T | |
| 184 193 G8371T | |
| 185 BHR/920262933_S19_L001/2020|MW228054.1|20-06-19 C2937T,C21310A | |
| 186 195 C22477T | |
| 187 England/ALDP-955F15/2020|20-06-08 C882T,C17746T,G19962T,G25793A,G28907T | |
| 188 England/ALDP-94EB75/2020|20-06-17 C3811T,G22225A | |
| 189 USA/TX-CDC-3009/2020|MT512440.1|20-03-10 T9708C,C10712T | |
| 190 England/BRIS-130015/2020|20-04-11 C6361T,C14786T,G20578T | |
| 191 204 G10631T | |
| 192 USA/MA_MGH_00136/2020|MT520439.1|20-03-25 | |
| 193 USA/MA_MGH_00486/2020|MT520279.1|20-03-27 G8131T | |
| 194 Wales/PHWC-2AF12/2020|20-04-06 C19884T,C26447A | |
| 195 207 C539T,C5884T,C7834T,G8618A,C14322T,C15579T,G16912T,C23604A,G23948T,C25207T,T26038C,C26600T,C27970A,C28887T | |
| 196 321398|LR962930.1|20-10-13 C22208T | |
| 197 England/QEUH-B8053B/2020|20-11-14 G22225T | |
| 198 IHUCOVID-0428|LR794641.1|? C6401T,T10480C,C13458T,C20946T | |
| 199 USA/WA-S3458/2020|MW494078.1|20-12-07 T2300C,C3535T,G5425T,C10594T,C10755T,C14120T,C14407T,G16647T,A19674G,A20396G,C21811T,C25544T,C28770T,C28869T,A29143G | |
| 200 210 T17838C,G26450T | |
| 201 hCoV-19_Switzerland_206-7951-BE_2020_isolate|LR963255.1|? | |
| 202 Switzerland/100363/2020|LR884411.1|20-03-20 | |
| 203 211 C18877T | |
| 204 212 C26735T | |
| 205 England/SHEF-10B22B9/2020|20-04-20 T241C,G3482A,A8821G,C15752T,G24197T,T26066C | |
| 206 IND/GBRC-366a/2020|MT951170.1|20-06-18 C26058T,G28851T | |
| 207 220 C22444T | |
| 208 SAU/596/2020|MT755893.1|20-02-18 A23503G | |
| 209 221 C593T,T3118C,T10200C,A12547G,C21772T,C28854T | |
| 210 Scotland/QEUH-A9E7BD/2020|20-10-20 A3120C | |
| 211 Scotland/EDB7778/2020|20-09-16 C28045T | |
| 212 223 C22444T,C28854T | |
| 213 224 T1947C | |
| 214 England/CAMC-A65DDB/2020|20-10-11 G2659T,G5008T,G19549T,C25349A,G25947C,G26062T | |
| 215 England/QEUH-9F3FDD/2020|20-09-24 T7292C,T8410C,C10833T,C11572T,C16293T,T23986C | |
| 216 England/QEUH-96A85E/2020|20-08-14 C7528T,T23986C,C29555T | |
| 217 228 G922A,G3431T,T5653C,G5950A,C7504T,T24175C,C26060T | |
| 218 HongKong/Homo-sapiens/HKG/Case5132/2020|MW181761.1|20-10-06 C14724T | |
| 219 HongKong/Homo-sapiens/HKG/Case5126/2020|MW181753.1|20-10-06 A6391G | |
| 220 England/PHEC-149F0D/2020|20-11-19 C1122T,T4057C,G6077T,A10323G,G13858T,G21724T,C27092T,C27434T,G28975T | |
| 221 England/MILK-970CE0/2020|20-08-18 C6312T,C12513T,G14122T,A20559G,C23127T,G26389T,T26876C,C28311T,A28900C | |
| 222 England/SHEF-10CC3AA/2020|20-12-17 A749G,C1420T,C2113T,C6268A,C6701T,C7318T,C9438T,C14724T,A17637G,C20555T,C21660A,G22201T,C22480A,G23522C,A25856C | |
| 223 England/MILK-566C5A/2020|20-06-12 C11514T,C13168T,G24764T | |
| 224 237 C2898T,C6681T,C7728T,G12191T,T16993C,G25311T | |
| 225 England/CAMC-C2CDFC/2020|20-12-07 T3366C | |
| 226 England/MILK-CAA0EE/2020|20-12-18 C28411T | |
| 227 240 C4543T,G5629T,G9526T,C11497T,G13993T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A | |
| 228 England/MILK-97356A/2020|20-08-14 C15720T | |
| 229 England/MILK-A230C1/2020|20-10-03 A2175G | |
| 230 243 C1427T,A2285T,G5329A,G7328T,C10369T,C12513T,C14120T,C17676T,C19955T,A20916G,G23593T,G26056T,A27107T,T27384C,C28760A,C29642T | |
| 231 England/TFCI-26FA9B7/2020|20-12-31 | |
| 232 England/MILK-B94ACC/2020|20-11-13 C15237T | |
| 233 England/QEUH-96A29C/2020|20-08-13 C15654T,C16915T,G21204T,T24202C,G28899T,G29692T | |
| 234 USA/VA_NIDDL_3033/2020|MT776421.1|20-04-07 C27416T,G28086T | |
| 235 USA/UT-03892/2020|MT711875.1|20-04-13 C683T,A6512C | |
| 236 USA/CA-CZB-1414/2020|MT628125.1|20-03-16 G10793T,C29311T | |
| 237 USA/WA-S1281/2020|MT821642.1|20-05-12 A2161G,G11417T,C16376T | |
| 238 USA/WI-UW-288/2020|MT706396.1|20-04-08 C9195T,T15354C,C21855T | |
| 239 USA/FL-BPHL-1097/2020|MT956684.1|20-08-19 C1288T,G1298A,G25445T,G28851T,G29254T | |
| 240 England/ALDP-5D3DEC/2020|20-06-19 A1154G,G29474T | |
| 241 USA/SEARCH-0367-SAN/2020|MT810987.1|20-04-05 A1096G,C1420T,G14874T | |
| 242 Scotland/EDB5108/2020|20-03-31 C2113T,C7765T,C17690T,T24923C | |
| 243 265 A25524G,C26801T,G29449T | |
| 244 USA/UT-UPHL-2012381006/2020|MW421943.1|20-06-18 | |
| 245 USA/UT-UPHL-2012984468/2020|MW421976.1|20-06-16 C10741T | |
| 246 USA/UT-UPHL-2012945035/2020|MW421975.1|20-06-19 C9967T,A11246T,A23949G,C29013T | |
| 247 269 C3602T,G4442T,C6525T,C6941T,C15324T,A16044T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T | |
| 248 England/QEUH-9C7EA8/2020|20-09-11 G2407T,T2924C,G11761T | |
| 249 England/MILK-9A8AB8/2020|20-08-31 C222T | |
| 250 Scotland/GCVR-172150/2020|20-03-30 C1545T,C22879A | |
| 251 England/BRIS-122C4F/2020|20-04-02 A11782G,G22203T,G27754T | |
| 252 275 A20268G | |
| 253 USA/RI-CDC-0556/2020|MT304488.1|20-03-01 C27684T | |
| 254 Switzerland/100198/2020|LR884312.1|20-03-17 G28881A | |
| 255 277 C28854T | |
| 256 Scotland/EDB3341/2020|20-04-08 G27987T | |
| 257 USA/CA-CZB-11521/2020|MW276549.1|20-07-18 C4633T,T14643C,C22482T,G27506T | |
| 258 284 G7798T | |
| 259 England/LOND-D5444/2020|20-04-15 C12789T | |
| 260 Scotland/CVR3238/2020|20-04-26 G22992T | |
| 261 286 C593T,C2445T,C5301T,C5365T,A6391G,A10399G,G11266A,G19969A,C22120T,G28086T | |
| 262 USA/CA-LACPHL-AE00081/2020|MW642471.1|20-08-22 C16362T | |
| 263 USA/CA-LACPHL-AE00075/2020|MW642465.1|20-08-21 G25775T | |
| 264 Scotland/EDB3662/2020|20-04-28 T5507A,A19855G | |
| 265 USA/CA-CDC-4704/2020|MW001903.1|20-06-04 C4596A,G19086T,C23114T | |
| 266 England/OXON-B1781/2020|20-05-04 C1714T,C27213T | |
| 267 USA/SEARCH-1094-SAN/2020|MT811526.1|20-06-19 G208T,G23522A,A25747C | |
| 268 297 A8884G,C16694A,C26177T | |
| 269 USA/TX-DSHS-0945/2020|MW190134.1|20-07-03 C24258T | |
| 270 USA/TX-DSHS-1150/2020|MW252120.1|20-07-03 | |
| 271 USA/WI-UW-1288/2020|MW035458.1|20-09-02 C884T,G2258A,A6441G,C8140T,A9204G,C29445T | |
| 272 303 C832T,C2252A,G11243T,T18723C,G25720T,C27532T,C29085T | |
| 273 England/CAMC-94C02D/2020|20-07-15 C27371T | |
| 274 England/MILK-95DBDD/2020|20-06-20 A20667G | |
| 275 England/CAMB-79ECC/2020|20-04-01 A10323G,G21778A | |
| 276 England/QEUH-963433/2020|20-08-10 C2706T,C5339T,C25731T,C28833T | |
| 277 322 T7767C,C8047T,G12988T,G15598A,C17104T,G18028T,C22879A,T24910C,T26972C,C27800A,G29734C | |
| 278 England/ALDP-A2FCA3/2020|20-10-05 T7919G,C20451T,G21770A,C24734T | |
| 279 330 C16394T,C22127T,G23876A,G25947T,C29274T | |
| 280 England/MILK-A474DA/2020|20-10-06 A6659G,G25218T | |
| 281 England/QEUH-AA0035/2020|20-10-20 T8110C,G11417T | |
| 282 341 C15324T | |
| 283 USA/WI-UW-37/2020|MT706158.1|20-03-22 G11417T | |
| 284 IND/GBRC174b/2020|MT607610.1|20-06-05 C3634T,C22444T,C28854T | |
| 285 France/10036BG/2020|MT470106.1|20-03 G28202A | |
| 286 POL/PL_MCB_97/2020|MW273879.1|20-05-10 C2570T,A7031G,G13617T | |
| 287 348 G19542T,G20679A,T27576G | |
| 288 Scotland/CVR3629/2020|20-05-24 G18380T | |
| 289 Scotland/QEUH-5456F9/2020|20-05-13 C6606T | |
| 290 England/QEUH-990752/2020|20-08-29 C622T,G4657T,T5182C,C11758T,C12043T,G16846T,C25075T,C25904T,C28269T,C29733T | |
| 291 350 C15277T | |
| 292 AUS/VIC38/2020|MT450953.1|20-03-11 C10350T | |
| 293 IHUCOVID-0133|LR794459.1|? C8394T | |
| 294 Switzerland/240009/2020|LR880588.1|20-08-07 G3239A,G7042T,T17142A,T17688C,G21334T,G28655A,G28881A | |
| 295 354 A26530G | |
| 296 355 G11596T | |
| 297 USA/MN67-MDH67/2020|MT911566.1|20-03-14 | |
| 298 Netherlands/NA_292/2020|LR878032.1|20-04-01 G20568A | |
| 299 356 C8293T,T18488C,T24739C | |
| 300 Switzerland/101166/2020|LR824397.1|20-03-31 C22323T | |
| 301 Switzerland/100154/2020|LR824311.1|20-03-16 C17118T | |
| 302 PER/covper091/2020|MW030227.1|20-03-17 C15277T,A21917G | |
| 303 England/CAMB-737D6/2020|20-03-31 A2775G,G4255T,C6861T,C13568T,A20355G | |
| 304 Scotland/GCVR-173C30/2020|20-04-07 G3831A,T7441C | |
| 305 361 T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T | |
| 306 362 C3426T,C19862T | |
| 307 363 C11050A | |
| 308 England/MILK-BB0022/2020|20-11-18 | |
| 309 England/MILK-BB0031/2020|20-11-18 | |
| 310 England/PHEC-152C73/2020|20-11-16 C21682T | |
| 311 Scotland/QEUH-9D11C0/2020|20-09-16 T4195A,C10977T,C24334T,G25049T,G25062T,C26151T,C28657T,C29366T | |
| 312 366 C27944T | |
| 313 367 G204T | |
| 314 England/ALDP-9BE8B5/2020|20-09-09 T16242A,G28745A | |
| 315 369 C21614T | |
| 316 Scotland/CVR4309/2020|20-09-14 C7471T | |
| 317 373 C15480T | |
| 318 England/QEUH-A76C07/2020|20-10-12 G21777A | |
| 319 England/MILK-AC7997/2020|20-10-21 C125T | |
| 320 Scotland/QEUH-9B75D3/2020|20-09-04 G8179T,G29778T | |
| 321 376 A1987G | |
| 322 England/ALDP-9BECB9/2020|20-09-10 T14721C,C23029T,T25519G | |
| 323 England/MILK-9A9D09/2020|20-09-01 A1230G,G6344T | |
| 324 England/CAMC-AEA62E/2020|20-10-25 C66T,G10870T,A11781G,C18329T,C25614T | |
| 325 380 A1866G,A6889C,C12923T,C18029T,C19269T,A27137G | |
| 326 England/PHEC-14E15D/2020|20-12-09 C20178T | |
| 327 England/PHEC-149635/2020|20-10-28 | |
| 328 Switzerland/270068/2020|LR882987.1|20-09-02 C13671T,C14805T,G17058T,G17278T,A20284T,T20285C,A27755T | |
| 329 England/ALDP-9E75E9/2020|20-09-25 A408G,G2764T,C22088T,C29686T | |
| 330 386 G23311C | |
| 331 England/ALDP-A68CF9/2020|20-10-12 G6476T,C10626T | |
| 332 England/MILK-9F1898/2020|20-09-25 C5239T,G25440T,C27752T | |
| 333 Wales/PHWC-4815AA/2020|20-10-13 C12049T,G21800T,A22053C,G22346T | |
| 334 England/ALDP-4A2A77/2020|20-05-22 C7834T,C16997T,G25429T | |
| 335 England/BRIS-12468B/2020|20-04-09 C1909T,T27576C | |
| 336 England/NORW-E9DF7/2020|20-05-02 C2940T,C7765T | |
| 337 398 C6990T | |
| 338 Wales/PHWC-27B20/2020|20-03-30 T22435C | |
| 339 Wales/PHWC-2624A/2020|20-03-27 C27476T | |
| 340 Wales/PHWC-16930B/2020|20-04-01 C3264T,C29200T | |
| 341 Wales/PHWC-29E43/2020|20-04-04 G9220A,T26512C | |
| 342 England/LOND-D3534/2020|20-03-27 C25350T,T27280C | |
| 343 England/LIVE-A63E5/2020|20-03-18 G680T,T17835C | |
| 344 Wales/PHWC-27461/2020|20-03-31 C5506T,G14241T,C19374T | |
| 345 AUS/VIC1056/2020|MT451723.1|20-04-03 T7438C,A21944T,C29353T | |
| 346 409 A187G | |
| 347 USA/TX-DSHS-1397/2020|MW309099.1|20-05-20 A10770G,C16017T,T27212C,G27561T | |
| 348 England/BRIS-128DCE/2020|20-04-14 C12213T,C19066A | |
| 349 England/LIVE-A65EF/2020|20-03-19 G10523C,G14580T | |
| 350 IND/GBRC209a/2020|MT664202.1|20-06-11 A2292C,C2836T,G4300T,C18568T,C18877T,G21724T,G25563T,C29750T | |
| 351 Scotland/CVR30/2020|20-03-13 C1884T,T26497C | |
| 352 IND/GBRC99/2020|MT509504.1|20-05-06 G4866T,C14425A,A21511G | |
| 353 AUS/VIC1239/2020|MT451821.1|20-04-02 C6723T,T26094C,G28476T | |
| 354 IND/GBRC128/2020|MT539172.1|20-05-02 C4084T,G5572T | |
| 355 POL/PL_MCB_75/2020|MW273857.1|20-04-16 A544G,C17104T | |
| 356 Netherlands/NA_302/2020|LR878041.1|20-04-01 A3058G,G20275A | |
| 357 USA/TX-DSHS-0975/2020|MW217385.1|20-06-16 G2282A,T9742C,C17639T,G20160T | |
| 358 423 C23422T,T23849C,C29686T | |
| 359 Scotland/CVR129/2020|20-03-13 G29227A | |
| 360 Scotland/CVR52/2020|20-03-14 C25667T | |
| 361 426 G28882A,G28883C | |
| 362 Poland/covid_hub_pl_ibch_0033/2020|LR899101.1|20-05-20 T241C | |
| 363 427 G28881A | |
| 364 428 C28887T | |
| 365 GRC/202_32984/2020|MT459870.1|20-03-12 | |
| 366 GRC/208_33922/2020|MT459876.1|20-03-14 | |
| 367 429 T19839C | |
| 368 England/QEUH-7A4BBB/2020|20-07-14 C2511T,G3242A,G8120C,C21646T,A24205T,G28083T | |
| 369 USA/WA-S1922/2020|MT831459.1|20-06-03 G242T,C12528A,C18086T | |
| 370 432 G25552T | |
| 371 Wales/PHWC-260AA/2020|20-03-24 T7168C,G11801A | |
| 372 434 A26332G,A28877T,G28878C | |
| 373 England/BRIS-185470D/2020|20-05-01 | |
| 374 England/BRIS-12AF02/2020|20-05-01 G27670T | |
| 375 USA/WA-S1775/2020|MT834200.1|20-06-01 G13513A,C28256T,C29784T | |
| 376 England/ALDP-B82A0D/2020|20-11-14 C4456T,C14340T,G17551A,C18877T,A19167G,C19274A,G22017T,G23012A,G23868T,T26604C,C27213T,C28833T,G29527T | |
| 377 443 C3411T,G3871T,C4999T,A5040G,A12519G,G14371T,C15240T,C21757T,G23012A,G23593C,A23756T,A25048G,G25166C,G29751T | |
| 378 USA/MA-Broad_CRSP-00367/2021|MW599505.1|21-01-08 C22264T | |
| 379 USA/MA-MGH-03951/2021|MW617773.1|21-01-22 T27824C | |
| 380 446 C6573T,C25528T | |
| 381 England/BRIS-12A70A/2020|20-05-01 C21077T | |
| 382 England/CAMB-77F61/2020|20-04-01 G22299A | |
| 383 England/PHEC-1B7C1/2020|20-04-08 C18115T | |
| 384 Scotland/CVR3919/2020|20-06-21 A22330G,T27264G | |
| 385 England/ALDP-9558ED/2020|20-06-12 C1800A,G2398A,C23854T,G25972A,G27842T | |
| 386 England/BRIS-12F78D/2020|20-03-10 T11638C,C25584A | |
| 387 452 C17678T | |
| 388 England/NORT-282972/2020|20-03-27 | |
| 389 England/CAMB-80554/2020|20-04-09 T3745C | |
| 390 456 T1094C,C3429T,G8578T,C8917T,A10720G,G17280T,C18129T | |
| 391 England/CAMC-94328A/2020|20-07-25 | |
| 392 England/CAMC-9424A3/2020|20-07-21 | |
| 393 USA/MA-QDX-3180/2021|MW505247.1|21-01-05 T760C,A1673G,C1884T,C16329T,C18120T,C18267T,C20762T,C22713T,C29296T | |
| 394 USA/CA-CZB-1885/2020|MT750387.1|20-04-17 T4711C,A6709G,C17125T | |
| 395 USA/FL-BPHL-1469/2020|MW040679.1|20-05-09 C673T | |
| 396 USA/CA-CZB-13945/2020|MW565647.1|20-06-22 G443A,T6579C,G28378T | |
| 397 England/OXON-AEBC7/2020|20-04-12 C9430T,G24781T,G29706T | |
| 398 Wales/PHWC-164485/2020|20-05-02 C9438T,A16653G,G29777T | |
| 399 England/ALDP-51F142/2020|20-06-02 G922T,C6541T,C19983T | |
| 400 England/ALDP-49E391/2020|20-05-20 C3170T,C6336T,T26260G,C27673T | |
| 401 Northern_Ireland/NIRE-10677D/2020|20-05-14 C10376T,G18148A,C26208T | |
| 402 475 A27932G,G29705T | |
| 403 England/MILK-9705F4/2020|20-08-18 C15045T | |
| 404 England/ALDP-9B6440/2020|20-08-28 | |
| 405 476 G25088T | |
| 406 USA/MD-MDH-0841/2021|MW621433.1|21-01-17 T733C,C2749T,C3828T,A5648C,A6319G,A6613G,C12778T,C13860T,G17259T,C21614T,C21621A,C21638T,G21974T,G22132T,G23012A,A23063T,C23525T,C24642T,T26149C,G28167A,C28512G,A28877T,G28878C | |
| 407 Scotland/EDB6515/2020|20-06-15 | |
| 408 England/NORW-EE34B/2020|20-03-24 G18315A,C24904T,T25088G | |
| 409 England/ALDP-6839B9/2020|20-07-02 A2576T,C5175T,C6401T,A27691T | |
| 410 USA/FL-BPHL-1607/2020|MW166073.1|20-07-28 C18652T,T22843C | |
| 411 England/NOTT-111117/2020|20-05-03 A2526C,C10440T,T25316C | |
| 412 England/ALDP-68EFBC/2020|20-07-02 T13827C,G18756T,C23430T | |
| 413 495 G3230A,T24076A | |
| 414 England/PHEC-16F19/2020|20-03-31 C4570A | |
| 415 England/GSTT-265D4DF/2020|20-03-19 | |
| 416 498 C1420T,C19366T | |
| 417 Northern_Ireland/NIRE-FBB52/2020|20-04-13 C26270T | |
| 418 Northern_Ireland/NIRE-FAC7E/2020|20-04-15 C6114T | |
| 419 499 G10097A,C23731T | |
| 420 England/NORT-283BE4/2020|20-04-03 C24026T | |
| 421 500 C4002T,C13536T | |
| 422 England/CAMB-81070/2020|20-04-20 C4698T | |
| 423 501 T28110C | |
| 424 England/CAMB-72B44/2020|20-03-22 | |
| 425 England/CAMB-822D3/2020|20-04-12 | |
| 426 Switzerland/300433/2020|LR898634.1|20-09-29 G2995T,T4871C,C6449T,C10252T,C19366T,G27382T,T27808C | |
| 427 SRB/NS19622-16-06/2020|MW327528.1|20-06-15 G24794T | |
| 428 DK/KL14_Farm1/2020|MT919536.1|20-06-17 C15656T,C25936T | |
| 429 511 A1630C,C27679T | |
| 430 England/BRIS-123EDF/2020|20-04-08 C2509T | |
| 431 England/BRIS-123F09/2020|20-04-08 C9118T | |
| 432 513 C3373A | |
| 433 514 C2706T,G9968T,G16647T,T23480G | |
| 434 EGY/CUNCI-HGC5I001/2020|MT611527.1|20-06-02 | |
| 435 EGY/CUNCI-HGC5I011/2020|MT611536.1|20-06-02 | |
| 436 Scotland/CVR41/2020|20-03-13 C823T | |
| 437 521 C313T | |
| 438 USA/WA-UW-6243/2020|MT412316.1|20-04-02 C3096T | |
| 439 Japan/TKYE627000_2020/2020|LC593811.1|20-08 T4346C,C7728T,C9286T,C10376T,C14708T,C28725T,G29692T | |
| 440 England/QEUH-96E605/2020|20-08-17 C2841T,G10886A,G17278T,C18032T,G18105T,G18662C,C23625T,A25910G | |
| 441 USA/ME-HETL-J0061/2020|MT886346.1|20-03-20 A11348G,G28690T | |
| 442 IND/GBRC455a/2020|MW600436.1|20-12-24 G160T,T682C,C900T,G3259T,C4048T,C5700A,C14937T,C17802T,C23604A,C24130T,C25721T,G25767T,G28903T | |
| 443 USA/FL-BPHL-0303/2020|MT757111.1|20-05-30 C823T,A11023G | |
| 444 Japan/TKYE622411_2020/2020|LC593808.1|20-07 C8917T,C18167T,G21518T,G28975T,G29773T | |
| 445 England/MILK-A18C8F/2020|20-10-03 G3056A,G11221T,G12514T,G17259T,C19089T,G23120T,A28338G,G29690T | |
| 446 Wales/PHWC-30957/2020|20-04-08 T11654C,G22627A,G28628T | |
| 447 LC573289.2|20-06 G2305T,G25563C,G28178T | |
| 448 TUR/Kafkas-SARSCoV2-0036/2020|MT787743.1|20-07-15 C2509T,G5015A,C14724T,G24262T,G27703T | |
| 449 542 T29148C | |
| 450 543 G25793T,T27299C | |
| 451 544 T25793G | |
| 452 BRA/LRV-SARS.CoV-2.1/2020|MT807936.1|20-05-08 C28969T | |
| 453 USA/MA_MGH_00693/2020|MT520290.1|20-04-06 C25916T,T28360C,C29769T | |
| 454 CHL/Santiago-PUC_MVL_0491/2020|MW365473.1|20-05-13 A2475G,C14805T | |
| 455 England/CAMB-74D5B/2020|20-03-19 | |
| 456 England/LOND-D53CF/2020|20-04-15 G621A | |
| 457 551 G6356A,C7113T,C8991T,T14238C,A18270C,T18989C,C21058T,C23525T | |
| 458 USA/WA-S2724/2020|MT947562.1|20-07-04 | |
| 459 USA/WA-S2728/2020|MT947566.1|20-07-08 | |
| 460 Scotland/CVR3185/2020|20-04-28 C16946T,G26615T | |
| 461 England/BRIS-127A40/2020|20-04-17 G2659T,C17249T,G17722T | |
| 462 England/EXET-136ED9/2020|20-04-22 G2164A,C8733T | |
| 463 564 G569A,C5482T,G17944T,C18747T,A22182G | |
| 464 England/ALDP-907D09/2020|20-06-22 C20320T | |
| 465 England/MILK-85E3E4/2020|20-07-18 G2144T | |
| 466 England/MILK-95862C/2020|20-06-11 A2641G,C3622T,C25844T,C28087T,G28557T | |
| 467 566 G21624T | |
| 468 England/PHEC-219E0/2020|20-05-01 T23227C | |
| 469 England/LEED-2AA59E/2020|20-04-06 C28969T | |
| 470 England/BRIS-125D67/2020|20-03-29 C6347T,G18859T | |
| 471 569 G1874T,C8683T,C28093T | |
| 472 England/ALDP-94D8F7/2020|20-06-20 A9997C | |
| 473 England/NOTT-111BFB/2020|20-05-29 G26426A | |
| 474 570 A2641G,C9803A,A10786G,C10833T,C18687T,C25844T,T27811C | |
| 475 England/ALDP-95A754/2020|20-06-13 T20764C | |
| 476 England/ALDP-95CEA8/2020|20-06-15 C14931T | |
| 477 572 G26918T,T29464C | |
| 478 England/MILK-8664D7/2020|20-07-17 C29733T | |
| 479 England/CAMC-947392/2020|20-07-18 C7843T,G15438T,C25207T,T25949C,C28453T | |
| 480 Wales/PHWC-162E7A/2020|20-05-19 C5497T,C6582T | |
| 481 England/ALDP-71D072/2020|20-07-01 C21637T,T26156C,A28169G | |
| 482 583 G25617T | |
| 483 England/ALDP-954C6A/2020|20-06-13 G27857T | |
| 484 England/CAMC-A40F67/2020|20-10-06 G1590T,A11120G,A12529G | |
| 485 586 C835T | |
| 486 England/QEUH-9B6EAC/2020|20-09-09 A29700G | |
| 487 England/NORT-2A4CAE/2020|20-09-17 C27945T | |
| 488 Northern_Ireland/NIRE-FB369/2020|20-08-31 A6900G,G25456T | |
| 489 589 G21724T | |
| 490 England/LEED-2AA394/2020|20-03-31 G11230T,C20941T,G23587C | |
| 491 592 G17302T,C25046T | |
| 492 England/WSFT-25C13CB/2020|20-04-17 | |
| 493 England/PORT-2F5D9C/2020|20-06-05 A5277G | |
| 494 England/PHEC-20B81/2020|20-04-16 C20474T | |
| 495 England/MILK-9570D4/2020|20-06-10 T3163C,C7768T | |
| 496 DV_IZSPB_236_S50|LR992121.1|20-08-29 C3737T,A3959G,C11758T,G12769T,G25785T,G29402T | |
| 497 England/ALDP-9D8FFC/2020|20-09-18 G1210T,G9802T,G12067T,T20613C | |
| 498 598 C3177T,G22093A | |
| 499 England/NORT-28B1EA/2020|20-04-18 C27741T | |
| 500 England/NORT-28B28D/2020|20-04-18 A8734G | |
| 501 599 G10265A | |
| 502 England/ALDP-5D52BE/2020|20-06-18 T13794G,T28494C | |
| 503 England/ALDP-4A2BFC/2020|20-05-22 A20826G,A23207G | |
| 504 England/ALDP-49F5B8/2020|20-05-22 A19650G,T21368C | |
| 505 England/LIVE-9BC33/2020|20-04-21 C11620T | |
| 506 England/ALDP-5A2A49/2020|20-06-14 T3154C,C18981T | |
| 507 609 G16813A | |
| 508 USA/WA-S1434/2020|MT821707.1|20-05-21 C8802T | |
| 509 USA/WA-S2598/2020|MT831859.1|20-06-18 C6445T,G16852T,G29254T | |
| 510 USA/WA-S820/2020|MT641503.1|20-04-15 A5538T,G17261A,T25783C | |
| 511 USA/WA-S2573/2020|MT831840.1|20-06-17 G18803T,A22606G | |
| 512 England/ALDP-9BEB16/2020|20-09-09 C313T,C2445T,C9430T,G14428T,T15156C,C20368T,C26527T,C29149T,G29239A | |
| 513 616 C19170T,G19509A | |
| 514 Scotland/CVR1557/2020|20-04-03 G23401T | |
| 515 Wales/PHWC-34610/2020|20-04-21 G16014A | |
| 516 617 C26313T | |
| 517 Netherlands/NA_436/2020|LR883367.1|20-04-07 G29628T | |
| 518 Netherlands/Friesland_33/2020|LR883315.1|20-04-14 C4824T | |
| 519 618 C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T | |
| 520 619 G174T,G210T,C2453T | |
| 521 England/CAMC-B36516/2020|20-11-05 C2918T | |
| 522 England/CAMC-B362D3/2020|20-11-05 C29311T | |
| 523 620 T8603C,A17615G,G25437T | |
| 524 England/MILK-B3A284/2020|20-11-01 C27046T | |
| 525 England/CAMC-B365AD/2020|20-11-05 T19232C | |
| 526 621 A1163T | |
| 527 BGD/BCSIR_NILMRC_104/2020|MT655948.1|20-06-07 C19273T | |
| 528 623 T7540C,G16647T,G22992A,G23401A | |
| 529 AUS/VIC13094/2020|MW185501.1|20-07-31 G6662A | |
| 530 AUS/VIC11646/2020|MW155572.1|20-07-22 G6617T,C18555T,C22987T | |
| 531 625 C19488T | |
| 532 England/CAMB-82E1B/2020|20-04-14 A8374T | |
| 533 England/CAMC-947259/2020|20-07-21 A8244G,G8408A,G12191T,T26171A,C28500T,G29254A,G29474T,G29751C | |
| 534 628 A11869G,T27484C | |
| 535 SAU/KFSHRC44/2020|MT820480.1|20-04-11 | |
| 536 SAU/KAIMRC67/2020|MT820487.1|20-04-01 G29422T | |
| 537 Scotland/EDB300/2020|20-03-29 C2399T,C15240T | |
| 538 England/CAMB-1AA438/2020|20-04-17 T4149C,C12525T,G25599T | |
| 539 England/MILK-9C4087/2020|20-09-09 T1543A,C1938T,T4369C,T22020C,C27911T | |
| 540 England/PHEC-13ADF/2020|20-03-13 T15978C,G24794T | |
| 541 USA/CA-CZB-2184/2020|MW035923.1|20-05-26 C21205T,G21255C,G28960T | |
| 542 Scotland/QEUH-94375E/2020|20-08-02 G5554T,G19891T,C22938A,C24034T,G25249T,G25785T,G26152T,C27532T,G28321T,C29614T | |
| 543 641 T3615C,G22256T,C23802T,A27403T,C27741T | |
| 544 England/CAMB-7C12A/2020|20-04-13 | |
| 545 England/CAMB-83348/2020|20-04-15 | |
| 546 644 G596T,T18231C | |
| 547 USA/MS-CDC-6546/2020|MW279423.1|20-08-25 G1589T | |
| 548 USA/TX-DSHS-1780/2020|MW425014.1|20-07-07 T3127C | |
| 549 648 G5950T,C19164T,A21137G,T27447C,T29661C | |
| 550 ZW-6983|LR963462.1|20-05-01 C10341T | |
| 551 ZW-6978|LR963455.1|20-05-01 A13833G | |
| 552 USA/GA-CDC-LC0013501/2021|MW643935.1|21-02-02 A3852T,C3961T,G7798T,C9891T,C10116T,C21846T,G23012A,T23287C,C23604A,C25276A,T26767C,C28720T | |
| 553 Netherlands/NA_359/2020|LR883961.1|20-04-07 C7095T,C13502T,A16179G | |
| 554 England/CAMB-1AE7FF/2020|20-04-29 G4207T,A4208C,C6033T,G11842T | |
| 555 England/ALDP-BCA4B0/2020|20-11-23 G1599T,C4965T,A6466G,A6616G,A7319G,G7954T,C12651T,G14371A,G21624T,G23587T,G28914T | |
| 556 USA/WA-S1222/2020|MT821613.1|20-05-08 C186T,C15933T,G16968T,T19839C,G28881A,G28882A,G28883C,C29784T | |
| 557 660 A14940G | |
| 558 USA/CA-CZB-1091/2020|MT460091.1|20-05-01 C15024T | |
| 559 USA/CA-CZB-11876/2020|MW276506.1|20-04-08 A26120G | |
| 560 USA/CDC-CruiseA-18/2020|MT159716.2|20-02-24 T514C,C22033A | |
| 561 USA/CA-QDX-1986/2020|MW190732.1|20-03-18 C11050T,A12557G,C24904T,A27359G | |
| 562 USA/CA-CZB-1015/2020|MT438733.1|20-04-22 T15867A,C25692T | |
| 563 USA/CA-CZB-1051/2020|MT449644.1|20-04-06 G7273A,C10277T | |
| 564 667 G29711T | |
| 565 England/LIVE-9D7D6/2020|20-04-15 C1218T,C27493T,G27806T | |
| 566 USA/WI-UW-314/2020|MT706422.1|20-04-16 A4838G,C7420T,C14937T,C20148T,G25907T | |
| 567 671 C28854T | |
| 568 Scotland/CVR780/2020|20-03-27 C5997T,C12710T | |
| 569 Japan/TKYE63557_2020/2020|LC581365.1|20-03 C11752T,C25665T,C26447T,A27700G,T28854C,T28912C | |
| 570 674 C6312A,C13730T,C23929T,C28311T | |
| 571 USA/CA-QDX-33/2020|MT614459.1|20-03-15 C66T | |
| 572 USA/DC-HP00063/2020|MT646075.1|20-03-13 C11455T | |
| 573 MYS/188407/2020|MT372480.1|20-03-18 C6310A,C19524T,T25473C | |
| 574 676 C8782T,T28144C | |
| 575 677 A23403G,C26088T | |
| 576 679 G9928T,G23403A | |
| 577 Scotland/EDB5629/2020|20-03-24 G27870T | |
| 578 Scotland/EDB5040/2020|20-04-02 C593T | |
| 579 680 C3037T,A20268G | |
| 580 Spain/R11/2020|LR884126.1|20-03-06 T3037C | |
| 581 Spain/LP19_4952/2020|LR884066.1|20-03-07 | |
| 582 682 T9477A,C14805T,G25979T | |
| 583 USA/FL-BPHL-0393/2020|MT757005.1|20-03-17 | |
| 584 683 C28863T | |
| 585 Spain/R10_33/2020|LR884127.1|20-03-02 T25979G | |
| 586 685 C4540T,C28657T | |
| 587 Scotland/CVR2435/2020|20-04-14 C15274T,C25714T,C26029A | |
| 588 AUS/VIC995/2020|MT451680.1|20-03-31 G17632A,C28311T | |
| 589 USA/MI-MDHHS-SC20124/2020|MT439284.1|20-03-24 G16381A,T17877C,G25500T,C25854T,G28878A,G29742A | |
| 590 697 T490A,C3177T,C24034T,T26729C,G28077C | |
| 591 USA/COVID20-0008/2020|MT764174.1|20-03-10 T18736C | |
| 592 USA/IL-CDC-IL2/2020|MT044257.1|20-01-28 | |
| 593 699 G1397A,T28688C,G29742T | |
| 594 England/PHEC-1A601/2020|20-03-04 A19526G | |
| 595 AUS/VIC1878/2020|MT745600.1|20-03-29 C1076T,A28955T |