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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/usher commit c1531745ea5f5c4fbd22ad18e290b47fdcb01bb1"
author iuc
date Tue, 11 May 2021 17:53:49 +0000
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England/BRIS-1853249/2020|20-04-02
NPL/61-TW/2020|MT072688.1|20-01-13
Wales/PHWC-25B04/2020|20-03-24
Wales/LIVE-A6831/2020|20-03-16
Scotland/EDB354/2020|20-03-30
England/SHEF-BFF8B/2020|20-03-25
England/SHEF-BFFC7/2020|20-03-25
England/PHEC-1E01E/2020|20-04-03
DP0476/2020|LC571003.1|20-02-16
DP0191/2020|LC570980.1|20-02-15
USA/CA-CZB-1091/2020|MT460091.1|20-05-01
USA/CA-CZB-11876/2020|MW276506.1|20-04-08
USA/CDC-CruiseA-18/2020|MT159716.2|20-02-24
USA/CA-QDX-1986/2020|MW190732.1|20-03-18
USA/CA-CZB-1015/2020|MT438733.1|20-04-22
USA/CA-CZB-1051/2020|MT449644.1|20-04-06
USA/CA-QDX-33/2020|MT614459.1|20-03-15
USA/DC-HP00063/2020|MT646075.1|20-03-13
England/PHEC-1A601/2020|20-03-04
England/ALDP-9EE3AC/2020|20-05-06
England/CAMB-8042A/2020|20-04-10
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England/LIVE-9D7D6/2020|20-04-15
USA/WI-UW-314/2020|MT706422.1|20-04-16
Scotland/CVR780/2020|20-03-27
Japan/TKYE63557_2020/2020|LC581365.1|20-03
MYS/188407/2020|MT372480.1|20-03-18
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AUS/VIC1878/2020|MT745600.1|20-03-29
England/SHEF-BFF21/2020|20-03-25
Switzerland/100159/2020|LR884273.1|20-03-16
England/LOND-126031F/2020|20-03-15
USA/NY-QDX-1999/2020|MW190795.1|20-03-16
USA/NY-QDX-1969/2020|MW190709.1|20-03-15
Scotland/CVR44/2020|20-03-13
Scotland/CVR207/2020|20-03-18
Spain/R11/2020|LR884126.1|20-03-06
Spain/LP19_4952/2020|LR884066.1|20-03-07
Spain/R10_33/2020|LR884127.1|20-03-02
Scotland/EDB5629/2020|20-03-24
Scotland/EDB5040/2020|20-04-02
USA/MI-MDHHS-SC20124/2020|MT439284.1|20-03-24
England/BRIS-125347/2020|20-03-27
IND/763/2020|MT577009.1|20
England/CAMB-75BD8/2020|20-03-29
USA/MI-MDHHS-SC20612/2020|MT585039.1|20-04-29
USA/MI-MDHHS-SC20597/2020|MT585043.1|20-04-29
USA/WI-UW-26/2020|MT706147.1|20-03-24
USA/IL-QDX-2568/2020|MW191367.1|20-03-14
USA/WI-UW-558/2020|MT750137.1|20-06-25
EGY/CUNCI-HGC5I033/2020|MT614347.1|20-06-02
Scotland/GCVR-172150/2020|20-03-30
England/BRIS-122C4F/2020|20-04-02
USA/RI-CDC-0556/2020|MT304488.1|20-03-01
Switzerland/100198/2020|LR884312.1|20-03-17
USA/WI-UW-37/2020|MT706158.1|20-03-22
Scotland/GCVR-173C30/2020|20-04-07
England/ALDP-4A2A77/2020|20-05-22
England/BRIS-12468B/2020|20-04-09
England/NORW-E9DF7/2020|20-05-02
Wales/PHWC-27B20/2020|20-03-30
Wales/PHWC-2624A/2020|20-03-27
Wales/PHWC-29E43/2020|20-04-04
England/LOND-D3534/2020|20-03-27
England/LIVE-A63E5/2020|20-03-18
Wales/PHWC-27461/2020|20-03-31
AUS/VIC1056/2020|MT451723.1|20-04-03
England/LIVE-A65EF/2020|20-03-19
IND/GBRC209a/2020|MT664202.1|20-06-11
Scotland/CVR30/2020|20-03-13
IND/GBRC99/2020|MT509504.1|20-05-06
AUS/VIC1239/2020|MT451821.1|20-04-02
IND/GBRC128/2020|MT539172.1|20-05-02
POL/PL_MCB_75/2020|MW273857.1|20-04-16
Netherlands/NA_302/2020|LR878041.1|20-04-01
USA/TX-DSHS-0975/2020|MW217385.1|20-06-16
Scotland/CVR129/2020|20-03-13
Scotland/CVR52/2020|20-03-14
Poland/covid_hub_pl_ibch_0033/2020|LR899101.1|20-05-20
England/ALDP-BCA4B0/2020|20-11-23
USA/WA-S1222/2020|MT821613.1|20-05-08
England/CAMB-76515/2020|20-03-29
England/LEED-2A8D10/2020|20-03-31
Scotland/CVR2381/2020|20-04-13
Scotland/CVR2197/2020|20-04-11
Scotland/CVR1519/2020|20-04-03
England/NORW-E8C37/2020|20-04-13
Wales/PHWC-3122E/2020|20-04-10
Wales/PHWC-1645EC/2020|20-05-10
England/PHEC-127E8/2020|20-03-28
England/MILK-9A8AB8/2020|20-08-31
IND/GBRC174b/2020|MT607610.1|20-06-05
France/10036BG/2020|MT470106.1|20-03
POL/PL_MCB_97/2020|MW273879.1|20-05-10
Scotland/CVR3629/2020|20-05-24
Scotland/QEUH-5456F9/2020|20-05-13
England/QEUH-990752/2020|20-08-29
AUS/VIC38/2020|MT450953.1|20-03-11
IHUCOVID-0133|LR794459.1|?
Switzerland/240009/2020|LR880588.1|20-08-07
USA/MN67-MDH67/2020|MT911566.1|20-03-14
Netherlands/NA_292/2020|LR878032.1|20-04-01
Switzerland/101166/2020|LR824397.1|20-03-31
Switzerland/100154/2020|LR824311.1|20-03-16
PER/covper091/2020|MW030227.1|20-03-17
England/CAMB-737D6/2020|20-03-31
Wales/PHWC-16930B/2020|20-04-01
USA/TX-DSHS-1397/2020|MW309099.1|20-05-20
England/BRIS-128DCE/2020|20-04-14
Scotland/CVR2435/2020|20-04-14
AUS/VIC995/2020|MT451680.1|20-03-31
England/CAMB-1AC7D3/2020|20-04-22
England/LEED-2A87C7/2020|20-04-03
USA/CA-CZB-1434/2020|MT628140.1|20-03-25
USA/UT-UPHL-201016311/2020|MW181497.1|20-04-09
USA/VA-DCLS-0676/2020|MT911804.1|20-04
USA/MI-QDX-476/2020|MW064508.1|20-03-23
USA/MI-MDHHS-SC20587/2020|MT585026.1|20-04-29
England/CAMB-7A7DF/2020|20-04-02
Netherlands/NA_18/2020|LR878352.1|20-03-09
USA/VA-DCLS-1557/2020|MW208010.1|20-08
USA/FL-BPHL-1018/2020|MT966219.1|20-07-17
Wales/PHWC-2E0A2/2020|20-04-10
USA/WA-S2746/2020|MT947577.1|20-07-19
USA/UT-05590/2020|MW084605.1|20-06-01
Netherlands/NA_588/2020|LR883860.1|20
USA/NMDOH-2020308468/2020|MW228235.1|20-08-24
USA/CA-CZB-1793/2020|MT750334.1|20-04-16
USA/WI-UW-1119/2020|MT929068.1|20-07-27
England/CAMB-7771E/2020|20-03-30
England/CAMB-7DC91/2020|20-04-05
USA/TX-DSHS-1232/2020|MW309089.1|20-03-25
USA/MD-MDH-0071/2020|MT827237.1|20-05-25
USA/WA-QDX-235/2020|MT806806.1|20-04-27
USA/VA-DCLS-0426/2020|MT679166.1|20-05
USA/VA-DCLS-0187/2020|MT450889.1|20-04
USA/UT-QDX-2224/2020|MW191025.1|20-03-13
USA/MN-MDH-1596/2020|MT997714.1|20-05-12
USA/MA_MGH_00458/2020|MT520347.1|20-04-04
USA/MA_MGH_00445/2020|MT520273.1|20-04-01
USA/NMDOH-2020126568/2020|MW006567.1|20-06-15
USA/MN-MDH-1464/2020|MT919997.1|20-03-24
USA/MD-MDH-0129/2020|MT937319.1|20-07-08
USA/TX-DSHS-1524/2020|MW349179.1|20-06-23
USA/WA-UW-6327/2020|MT412324.1|20-04-02
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USA/MI-QDX-298/2020|MW064340.1|20-03-21
USA/TX-QDX-261/2020|MT806804.1|20-05-01
USA/TX-DSHS-0675/2020|MW093567.1|20-07-16
USA/WI-UW-994/2020|MT846680.1|20-07-20
USA/WI-UW-522/2020|MT750102.1|20-06-24
USA/DC-HP00089/2020|MT509482.1|20-03-31
USA/IL-UW-1065/2020|MT929017.1|20-04-20
USA/MI-QDX-620/2020|MW064645.1|20-03-17
USA/MI-QDX-595/2020|MW064630.1|20-03-18
England/BRIS-12D9F2/2020|20-05-06
England/BRIS-12B156/2020|20-05-08
USA/WA-QDX-2548/2020|MW191307.1|20-03-16
USA/COVID20-1144/2020|MW067817.1|20-07-10
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Scotland/EDB6052/2020|20-05-08
England/CAMB-7FBCF/2020|20-04-16
England/CAMB-784BC/2020|20-04-06
B90|LR898037.1|?
ISR/hCov-19-Israel-CVL-n3304/2020|MW672627.1|20-03-09
USA/FL-BPHL-1462/2020|MW040672.1|20-04-20
USA/TX-CDC-3009/2020|MT512440.1|20-03-10
England/BRIS-130015/2020|20-04-11
USA/MA_MGH_00136/2020|MT520439.1|20-03-25
USA/MA_MGH_00486/2020|MT520279.1|20-03-27
Wales/PHWC-2AF12/2020|20-04-06
321398|LR962930.1|20-10-13
England/QEUH-B8053B/2020|20-11-14
IHUCOVID-0428|LR794641.1|?
USA/WA-S3458/2020|MW494078.1|20-12-07
hCoV-19_Switzerland_206-7951-BE_2020_isolate|LR963255.1|?
Switzerland/100363/2020|LR884411.1|20-03-20
USA/VA_NIDDL_3033/2020|MT776421.1|20-04-07
USA/UT-03892/2020|MT711875.1|20-04-13
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England/QEUH-9C7EA8/2020|20-09-11
Scotland/EDB3341/2020|20-04-08
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Scotland/CVR3238/2020|20-04-26
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England/OXON-B1781/2020|20-05-04
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USA/TX-DSHS-1150/2020|MW252120.1|20-07-03
USA/WI-UW-1288/2020|MW035458.1|20-09-02
England/CAMC-94C02D/2020|20-07-15
England/MILK-95DBDD/2020|20-06-20
England/CAMB-79ECC/2020|20-04-01
England/PHEC-152C73/2020|20-11-16
Scotland/QEUH-9D11C0/2020|20-09-16
Switzerland/270068/2020|LR882987.1|20-09-02
GRC/202_32984/2020|MT459870.1|20-03-12
GRC/208_33922/2020|MT459876.1|20-03-14
England/PHEC-1B7C1/2020|20-04-08
Scotland/CVR3919/2020|20-06-21
England/ALDP-9558ED/2020|20-06-12
England/BRIS-12F78D/2020|20-03-10
England/NORT-282972/2020|20-03-27
England/CAMB-80554/2020|20-04-09
England/CAMC-94328A/2020|20-07-25
England/CAMC-9424A3/2020|20-07-21
USA/MA-QDX-3180/2021|MW505247.1|21-01-05
USA/CA-CZB-1885/2020|MT750387.1|20-04-17
USA/FL-BPHL-1469/2020|MW040679.1|20-05-09
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England/OXON-AEBC7/2020|20-04-12
Wales/PHWC-164485/2020|20-05-02
England/ALDP-51F142/2020|20-06-02
England/ALDP-49E391/2020|20-05-20
Northern_Ireland/NIRE-10677D/2020|20-05-14
England/MILK-9705F4/2020|20-08-18
England/ALDP-9B6440/2020|20-08-28
Scotland/EDB6515/2020|20-06-15
England/ALDP-6839B9/2020|20-07-02
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England/NOTT-111117/2020|20-05-03
England/ALDP-68EFBC/2020|20-07-02
England/PHEC-16F19/2020|20-03-31
England/GSTT-265D4DF/2020|20-03-19
England/NORT-283BE4/2020|20-04-03
DK/KL14_Farm1/2020|MT919536.1|20-06-17
England/BRIS-123EDF/2020|20-04-08
England/BRIS-123F09/2020|20-04-08
USA/WA-UW-6243/2020|MT412316.1|20-04-02
England/LOND-D53CF/2020|20-04-15
USA/WA-S2724/2020|MT947562.1|20-07-04
USA/WA-S2728/2020|MT947566.1|20-07-08
Scotland/CVR3185/2020|20-04-28
England/BRIS-127A40/2020|20-04-17
England/EXET-136ED9/2020|20-04-22
England/ALDP-907D09/2020|20-06-22
England/MILK-85E3E4/2020|20-07-18
England/MILK-95862C/2020|20-06-11
England/PHEC-219E0/2020|20-05-01
England/LEED-2AA59E/2020|20-04-06
England/ALDP-95A754/2020|20-06-13
England/ALDP-95CEA8/2020|20-06-15
Wales/PHWC-162E7A/2020|20-05-19
England/ALDP-71D072/2020|20-07-01
England/ALDP-954C6A/2020|20-06-13
England/PHEC-20B81/2020|20-04-16
England/MILK-9570D4/2020|20-06-10
DV_IZSPB_236_S50|LR992121.1|20-08-29
England/ALDP-9D8FFC/2020|20-09-18
England/NORT-28B1EA/2020|20-04-18
England/NORT-28B28D/2020|20-04-18
England/LIVE-9BC33/2020|20-04-21
England/ALDP-5A2A49/2020|20-06-14
USA/WA-S1434/2020|MT821707.1|20-05-21
USA/WA-S2573/2020|MT831840.1|20-06-17
England/ALDP-9BEB16/2020|20-09-09
Scotland/CVR1557/2020|20-04-03
Wales/PHWC-34610/2020|20-04-21
BGD/BCSIR_NILMRC_104/2020|MT655948.1|20-06-07
England/CAMB-82E1B/2020|20-04-14
SAU/KFSHRC44/2020|MT820480.1|20-04-11
SAU/KAIMRC67/2020|MT820487.1|20-04-01
Scotland/EDB300/2020|20-03-29
England/CAMB-1AA438/2020|20-04-17
England/MILK-9C4087/2020|20-09-09
England/PHEC-13ADF/2020|20-03-13
USA/CA-CZB-2184/2020|MW035923.1|20-05-26
Scotland/QEUH-94375E/2020|20-08-02
England/CAMB-7C12A/2020|20-04-13
England/CAMB-83348/2020|20-04-15
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ZW-6983|LR963462.1|20-05-01
ZW-6978|LR963455.1|20-05-01
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Netherlands/NA_359/2020|LR883961.1|20-04-07
England/CAMB-1AE7FF/2020|20-04-29
Scotland/EDB2049/2020|20-04-18
Scotland/EDB2100/2020|20-04-19
CHL/Santiago-PUC_MVL_0011/2020|MW365225.1|20-03-18
England/CAMB-83FBD/2020|20-04-22
England/CAMB-1AD004/2020|20-04-30
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KOR/YS006/2020|MW345824.1|20-06-04
KOR/YS008/2020|MW345825.1|20-06-07
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USA/UT-00495/2020|MT444543.1|20-04-02
USA/UT-00353/2020|MT444564.1|20-03-27
USA/IL-UW-1064/2020|MT929016.1|20-07-26
Scotland/EDB2451/2020|20-04-23
Switzerland/240029/2020|LR880608.1|20-08-10
England/RAND-12B3F28/2021|21-02-09
England/RAND-12B3CF4/2021|21-02-09
England/LIVE-A91F7/2020|20-03-25
England/BRIS-127AD7/2020|20-04-16
BHR/920262933_S19_L001/2020|MW228054.1|20-06-19
IND/GBRC-366a/2020|MT951170.1|20-06-18
SAU/596/2020|MT755893.1|20-02-18
England/TFCI-26FA9B7/2020|20-12-31
England/MILK-B94ACC/2020|20-11-13
Scotland/EDB5108/2020|20-03-31
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USA/CA-LACPHL-AE00075/2020|MW642465.1|20-08-21
USA/SEARCH-1094-SAN/2020|MT811526.1|20-06-19
England/QEUH-963433/2020|20-08-10
England/MILK-BB0022/2020|20-11-18
England/MILK-BB0031/2020|20-11-18
England/PHEC-14E15D/2020|20-12-09
England/PHEC-149635/2020|20-10-28
England/ALDP-9E75E9/2020|20-09-25
England/ALDP-A68CF9/2020|20-10-12
England/MILK-9F1898/2020|20-09-25
Wales/PHWC-4815AA/2020|20-10-13
England/QEUH-7A4BBB/2020|20-07-14
USA/WA-S1922/2020|MT831459.1|20-06-03
USA/WA-S1775/2020|MT834200.1|20-06-01
England/ALDP-B82A0D/2020|20-11-14
England/BRIS-12A70A/2020|20-05-01
England/CAMB-77F61/2020|20-04-01
England/NORW-EE34B/2020|20-03-24
Northern_Ireland/NIRE-FBB52/2020|20-04-13
Northern_Ireland/NIRE-FAC7E/2020|20-04-15
England/CAMB-81070/2020|20-04-20
Scotland/CVR41/2020|20-03-13
England/QEUH-96E605/2020|20-08-17
USA/ME-HETL-J0061/2020|MT886346.1|20-03-20
USA/FL-BPHL-0303/2020|MT757111.1|20-05-30
Japan/TKYE622411_2020/2020|LC593808.1|20-07
England/MILK-A18C8F/2020|20-10-03
Wales/PHWC-30957/2020|20-04-08
LC573289.2|20-06
TUR/Kafkas-SARSCoV2-0036/2020|MT787743.1|20-07-15
England/CAMB-74D5B/2020|20-03-19
England/BRIS-125D67/2020|20-03-29
England/ALDP-94D8F7/2020|20-06-20
England/NOTT-111BFB/2020|20-05-29
England/MILK-8664D7/2020|20-07-17
England/CAMC-A40F67/2020|20-10-06
England/QEUH-9B6EAC/2020|20-09-09
England/NORT-2A4CAE/2020|20-09-17
Northern_Ireland/NIRE-FB369/2020|20-08-31
England/LEED-2AA394/2020|20-03-31
England/WSFT-25C13CB/2020|20-04-17
England/PORT-2F5D9C/2020|20-06-05
England/ALDP-5D52BE/2020|20-06-18
England/ALDP-4A2BFC/2020|20-05-22
England/ALDP-49F5B8/2020|20-05-22
USA/WA-S2598/2020|MT831859.1|20-06-18
USA/WA-S820/2020|MT641503.1|20-04-15
Netherlands/NA_436/2020|LR883367.1|20-04-07
Netherlands/Friesland_33/2020|LR883315.1|20-04-14
England/CAMC-B36516/2020|20-11-05
England/CAMC-B362D3/2020|20-11-05
England/MILK-B3A284/2020|20-11-01
England/CAMC-B365AD/2020|20-11-05
AUS/VIC13094/2020|MW185501.1|20-07-31
England/CAMC-947259/2020|20-07-21
USA/COVID20-0537/2020|MT981422.1|20-06-04
USA/COVID20-1129/2020|MW067826.1|20-07-10
USA/VA-DCLS-1147/2020|MT992749.1|20-04
USA/NY-QDX-2365/2020|MW191144.1|20-03-16
USA/CA-CZB-2139/2020|MT750510.1|20-05-21
USA/NC-QDX-174/2020|MT786825.1|20-04-27
England/MILK-6166F0/2020|20-07-05
USA/WI-UW-1194/2020|MT981478.1|20-08-11
England/ALDP-955F15/2020|20-06-08
England/ALDP-94EB75/2020|20-06-17
England/SHEF-10B22B9/2020|20-04-20
Scotland/QEUH-A9E7BD/2020|20-10-20
Scotland/EDB7778/2020|20-09-16
England/MILK-970CE0/2020|20-08-18
England/SHEF-10CC3AA/2020|20-12-17
England/MILK-566C5A/2020|20-06-12
England/CAMC-C2CDFC/2020|20-12-07
England/MILK-CAA0EE/2020|20-12-18
England/QEUH-96A29C/2020|20-08-13
England/ALDP-9BE8B5/2020|20-09-09
Scotland/CVR4309/2020|20-09-14
England/ALDP-9BECB9/2020|20-09-10
England/MILK-9A9D09/2020|20-09-01
England/CAMC-AEA62E/2020|20-10-25
Wales/PHWC-260AA/2020|20-03-24
England/BRIS-185470D/2020|20-05-01
England/BRIS-12AF02/2020|20-05-01
USA/MA-Broad_CRSP-00367/2021|MW599505.1|21-01-08
USA/MA-MGH-03951/2021|MW617773.1|21-01-22
USA/MD-MDH-0841/2021|MW621433.1|21-01-17
England/CAMB-72B44/2020|20-03-22
England/CAMB-822D3/2020|20-04-12
Switzerland/300433/2020|LR898634.1|20-09-29
SRB/NS19622-16-06/2020|MW327528.1|20-06-15
EGY/CUNCI-HGC5I001/2020|MT611527.1|20-06-02
EGY/CUNCI-HGC5I011/2020|MT611536.1|20-06-02
Japan/TKYE627000_2020/2020|LC593811.1|20-08
IND/GBRC455a/2020|MW600436.1|20-12-24
BRA/LRV-SARS.CoV-2.1/2020|MT807936.1|20-05-08
England/CAMC-947392/2020|20-07-18
AUS/VIC11646/2020|MW155572.1|20-07-22
England/CAMC-A65DDB/2020|20-10-11
England/QEUH-9F3FDD/2020|20-09-24
England/QEUH-96A85E/2020|20-08-14
HongKong/Homo-sapiens/HKG/Case5132/2020|MW181761.1|20-10-06
HongKong/Homo-sapiens/HKG/Case5126/2020|MW181753.1|20-10-06
England/PHEC-149F0D/2020|20-11-19
England/MILK-A230C1/2020|20-10-03
England/QEUH-A76C07/2020|20-10-12
England/MILK-AC7997/2020|20-10-21
Scotland/QEUH-9B75D3/2020|20-09-04
USA/MA_MGH_00693/2020|MT520290.1|20-04-06
CHL/Santiago-PUC_MVL_0491/2020|MW365473.1|20-05-13
England/MILK-97356A/2020|20-08-14
England/ALDP-A2FCA3/2020|20-10-05
England/MILK-A474DA/2020|20-10-06
England/QEUH-AA0035/2020|20-10-20