Mercurial > repos > iuc > usher_matutils

comparison test-data/test_16_subtree.vcf @ 3:39ce7344cd1e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/usher commit d44fdcd836306a2096d50bebb28d8faacdb0fbfd
author iuc
date Mon, 02 Feb 2026 14:39:11 +0000
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2:e0a0a473fc1e 3:39ce7344cd1e
1 ##fileformat=VCFv4.2
2 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT England/CAMC-A649C9/2020|20-10-10 England/MILK-B04890/2020|20-10-24 England/ALDP-AA169C/2020|20-10-22 England/MILK-A474DA/2020|20-10-06
3 NC_045512v2 241 C241T C T . . AC=4;AN=4 GT 1 1 1 1
4 NC_045512v2 556 C556T C T . . AC=2;AN=4 GT 1 1 0 0
5 NC_045512v2 3037 C3037T C T . . AC=4;AN=4 GT 1 1 1 1
6 NC_045512v2 4543 C4543T C T . . AC=2;AN=4 GT 1 1 0 0
7 NC_045512v2 5629 G5629T G T . . AC=2;AN=4 GT 1 1 0 0
8 NC_045512v2 6659 A6659G A G . . AC=1;AN=4 GT 0 0 0 1
9 NC_045512v2 6813 C6813T C T . . AC=1;AN=4 GT 1 0 0 0
10 NC_045512v2 7767 T7767C T C . . AC=2;AN=4 GT 0 0 1 1
11 NC_045512v2 8047 C8047T C T . . AC=2;AN=4 GT 0 0 1 1
12 NC_045512v2 8371 G8371A G A . . AC=1;AN=4 GT 0 1 0 0
13 NC_045512v2 9526 G9526T G T . . AC=2;AN=4 GT 1 1 0 0
14 NC_045512v2 11497 C11497T C T . . AC=2;AN=4 GT 1 1 0 0
15 NC_045512v2 12988 G12988T G T . . AC=2;AN=4 GT 0 0 1 1
16 NC_045512v2 13620 C13620T C T . . AC=1;AN=4 GT 1 0 0 0
17 NC_045512v2 13993 G13993T G T . . AC=2;AN=4 GT 1 1 0 0
18 NC_045512v2 14408 C14408T C T . . AC=4;AN=4 GT 1 1 1 1
19 NC_045512v2 15598 G15598A G A . . AC=2;AN=4 GT 0 0 1 1
20 NC_045512v2 15766 G15766T G T . . AC=2;AN=4 GT 1 1 0 0
21 NC_045512v2 16394 C16394T C T . . AC=2;AN=4 GT 0 0 1 1
22 NC_045512v2 16889 A16889G A G . . AC=2;AN=4 GT 1 1 0 0
23 NC_045512v2 17019 G17019T G T . . AC=2;AN=4 GT 1 1 0 0
24 NC_045512v2 17104 C17104T C T . . AC=2;AN=4 GT 0 0 1 1
25 NC_045512v2 18028 G18028T G T . . AC=2;AN=4 GT 0 0 1 1
26 NC_045512v2 18877 C18877T C T . . AC=2;AN=4 GT 1 1 0 0
27 NC_045512v2 20268 A20268G A G . . AC=2;AN=4 GT 0 0 1 1
28 NC_045512v2 22127 C22127T C T . . AC=2;AN=4 GT 0 0 1 1
29 NC_045512v2 22879 C22879A C A . . AC=2;AN=4 GT 0 0 1 1
30 NC_045512v2 22992 G22992A G A . . AC=2;AN=4 GT 1 1 0 0
31 NC_045512v2 23191 C23191T C T . . AC=1;AN=4 GT 0 0 1 0
32 NC_045512v2 23403 A23403G A G . . AC=4;AN=4 GT 1 1 1 1
33 NC_045512v2 23525 C23525T C T . . AC=2;AN=4 GT 1 1 0 0
34 NC_045512v2 23679 C23679T C T . . AC=1;AN=4 GT 0 1 0 0
35 NC_045512v2 23876 G23876A G A . . AC=2;AN=4 GT 0 0 1 1
36 NC_045512v2 23909 G23909A G A . . AC=1;AN=4 GT 0 0 1 0
37 NC_045512v2 24910 T24910C T C . . AC=2;AN=4 GT 0 0 1 1
38 NC_045512v2 25218 G25218T G T . . AC=2;AN=4 GT 0 0 1 1
39 NC_045512v2 25563 G25563T G T . . AC=2;AN=4 GT 1 1 0 0
40 NC_045512v2 25710 C25710T C T . . AC=2;AN=4 GT 1 1 0 0
41 NC_045512v2 25947 G25947T G T . . AC=2;AN=4 GT 0 0 1 1
42 NC_045512v2 26735 C26735T C T . . AC=2;AN=4 GT 1 1 0 0
43 NC_045512v2 26876 T26876C T C . . AC=2;AN=4 GT 1 1 0 0
44 NC_045512v2 26972 T26972C T C . . AC=2;AN=4 GT 0 0 1 1
45 NC_045512v2 27800 C27800A C A . . AC=2;AN=4 GT 0 0 1 1
46 NC_045512v2 28975 G28975C G C . . AC=2;AN=4 GT 1 1 0 0
47 NC_045512v2 29274 C29274T C T . . AC=2;AN=4 GT 0 0 1 1
48 NC_045512v2 29399 G29399A G A . . AC=2;AN=4 GT 1 1 0 0
49 NC_045512v2 29734 G29734C G C . . AC=2;AN=4 GT 0 0 1 1