comparison varscan_copynumber.xml @ 10:9f8dbbbc0267 draft default tip

"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 1232893782204bb041dd6ed46711295cb0bfc03f"

9:0bc56f894766

        <expand macro="p_value" label="P-value threshold for significant copynumber change-point" value="0.01" />

        <param argument="--data-ratio" name="data_ratio" type="float" value="1.0" min="0.0" max="1.0"
            label="The normal/tumor input data ratio for copynumber adjustment"/>

        <param name="sample_names" type="text" value="" help="Separate sample names by comma; leave blank to use default sample names."/>

    </inputs>
    <outputs>
        <data name="output" from_work_dir="galaxy_out.copynumber" format="interval"/>
    </outputs>
    <tests>

10:9f8dbbbc0267

        <expand macro="p_value" label="P-value threshold for significant copynumber change-point" value="0.01" />

        <param argument="--data-ratio" name="data_ratio" type="float" value="1.0" min="0.0" max="1.0"
            label="The normal/tumor input data ratio for copynumber adjustment"/>

    </inputs>
    <outputs>
        <data name="output" from_work_dir="galaxy_out.copynumber" format="interval"/>
    </outputs>
    <tests>