Mercurial > repos > iuc > varscan_mpileup

view test-data/varscan_copynumber_result2.interval @ 1:0bc800d67a0e draft

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planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
author iuc
date Sun, 15 Jul 2018 09:19:37 -0400
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chrom	chr_start	chr_stop	num_positions	normal_depth	tumor_depth	log2_ratio	gc_content
chr1	51436045	51436144	100	26.9	25.9	-0.052	51.0
chr1	51436145	51436214	70	27.6	30.3	0.134	45.7
chr1	51439427	51439526	100	31.1	29.3	-0.086	36.0
chr1	51439527	51439626	100	85.3	86.0	0.012	44.0
chr1	51439627	51439726	100	107.2	108.0	0.011	46.0
chr1	51439727	51439826	100	70.8	80.3	0.183	58.0
chr1	51439827	51439926	100	46.3	53.3	0.202	60.0
chr1	51439927	51439960	34	27.5	35.9	0.383	52.9