# HG changeset patch
# User iuc
# Date 1478558602 18000
# Node ID db56c8e79b1eef2d16953eefaaa2329dadc3a7fd
# Parent  2c771b43750267b9b1de909126a4145a959f3b83
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vegan/vegan_diversity commit bfa8bda732de882f6fa5f5375f8468ad229cceea

diff -r 2c771b437502 -r db56c8e79b1e test-data/output_diversity_index.tabular
--- a/test-data/output_diversity_index.tabular	Mon Feb 08 15:24:29 2016 -0500
+++ b/test-data/output_diversity_index.tabular	Mon Nov 07 17:43:22 2016 -0500
@@ -1,2 +1,2 @@
 	x
-1	1.58148247996845
+1	1.020620870138
diff -r 2c771b437502 -r db56c8e79b1e tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Feb 08 15:24:29 2016 -0500
+++ b/tool_dependencies.xml	Mon Nov 07 17:43:22 2016 -0500
@@ -4,6 +4,6 @@
         <repository changeset_revision="1ab514ba46e7" name="package_r_vegan_2_3_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="R" version="3.2.1">
-        <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>
diff -r 2c771b437502 -r db56c8e79b1e vegan_diversity.xml
--- a/vegan_diversity.xml	Mon Feb 08 15:24:29 2016 -0500
+++ b/vegan_diversity.xml	Mon Nov 07 17:43:22 2016 -0500
@@ -8,7 +8,8 @@
     <expand macro="requirements" />
     <expand macro="stdio" />
     <expand macro="version_command" />
-    <command><![CDATA[
+    <command>
+    <![CDATA[
         Rscript "${vegan_diversity_script}"
     ]]>
     </command>
@@ -73,4 +74,4 @@
     </help>
     <citations>
     </citations>
-</tool>
\ No newline at end of file
+</tool>
diff -r 2c771b437502 -r db56c8e79b1e vegan_macros.xml
--- a/vegan_macros.xml	Mon Feb 08 15:24:29 2016 -0500
+++ b/vegan_macros.xml	Mon Nov 07 17:43:22 2016 -0500
@@ -3,6 +3,8 @@
         <requirements>
             <requirement type="package" version="3.2.1">R</requirement>
             <requirement type="package" version="2.3-0">vegan</requirement>
+            <!-- Conda dependency -->
+            <requirement type="package" version="2.3_0">r-vegan</requirement>
             <yield />
         </requirements>
     </xml>