Mercurial > repos > iuc > vegan_fisher_alpha
comparison vegan_fisher_alpha.xml @ 1:d6b92ca3a9a1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vegan/vegan_fisher_alpha commit 55b5863db6c3e6cf443917117ec362a8daad8122
| author | iuc |
|---|---|
| date | Mon, 08 Feb 2016 15:24:35 -0500 |
| parents | a5a453f92273 |
| children | f9966e11885b |
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| 0:a5a453f92273 | 1:d6b92ca3a9a1 |
|---|---|
| 1 <tool id="vegan_fisher_alpha" name="Vegan Fisher Alpha" version="0.0.2"> | 1 <tool id="vegan_fisher_alpha" name="Vegan Fisher Alpha" version="0.0.3"> |
| 2 <description> | 2 <description> |
| 3 index | 3 index |
| 4 </description> | 4 </description> |
| 5 <macros> | 5 <macros> |
| 6 <import>vegan_macros.xml</import> | 6 <import>vegan_macros.xml</import> |
| 15 <configfiles> | 15 <configfiles> |
| 16 <configfile name="vegan_fisher_alpha_script"><![CDATA[ | 16 <configfile name="vegan_fisher_alpha_script"><![CDATA[ |
| 17 @RSCRIPT_PREAMBLE@ | 17 @RSCRIPT_PREAMBLE@ |
| 18 @RSCRIPT_LOAD_TABULAR_FILE@ | 18 @RSCRIPT_LOAD_TABULAR_FILE@ |
| 19 | 19 |
| 20 write.table( fisher.alpha( input_abundance, MARGIN = ${margin} ), "${output_fisher_alpha}", col.names=NA, sep = "\t") | 20 write.table( fisher.alpha( input_abundance, MARGIN = ${margin} ), "${output_fisher_alpha}", quote=FALSE, col.names=NA, sep = "\t") |
| 21 ]]> | 21 ]]> |
| 22 </configfile> | 22 </configfile> |
| 23 </configfiles> | 23 </configfiles> |
| 24 <inputs> | 24 <inputs> |
| 25 <expand macro="params_load_tabular_file" /> | 25 <expand macro="params_load_tabular_file" /> |