Mercurial > repos > iuc > virhunter
diff test-data/predicted.tsv @ 3:302332b914ef draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/VirHunter commit 58587e05f604590c70550e13fc51b7425e916ed4
| author | iuc |
|---|---|
| date | Sat, 14 Jan 2023 21:08:33 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/predicted.tsv Sat Jan 14 21:08:33 2023 +0000 @@ -0,0 +1,274 @@ + length id # viral fragments # plant fragments # bacterial fragments decision # viral / # total # viral / # total * length +0 19251 KY110737.1 30 2 6 virus 0.789 15189.039 +1 18478 KY707825.2 24 3 9 virus 0.667 12324.826000000001 +2 10427 AM267479.1 20 0 0 virus 1.0 10427.0 +3 9802 MT533611.1 19 0 0 virus 1.0 9802.0 +4 9798 LC537538.1 19 0 0 virus 1.0 9798.0 +5 9736 LC600465.1 19 0 0 virus 1.0 9736.0 +6 9736 LC494681.1 19 0 0 virus 1.0 9736.0 +7 9445 JN936438.1 18 0 0 virus 1.0 9445.0 +8 11892 LC602461.1 18 5 0 virus 0.783 9311.436 +9 9757 MK777994.1 18 1 0 virus 0.947 9239.878999999999 +10 9663 LC038073.1 18 1 0 virus 0.947 9150.860999999999 +11 9429 MK649741.1 17 1 0 virus 0.944 8900.975999999999 +12 9798 LC537503.1 17 0 2 virus 0.895 8769.210000000001 +13 8421 MN059369.1 16 0 0 virus 1.0 8421.0 +14 9798 AB747297.1 16 0 3 virus 0.842 8249.916 +15 8745 NC_008169.1 16 0 1 virus 0.941 8229.045 +16 10487 KX884756.1 15 5 0 virus 0.75 7865.25 +17 9287 MZ148041.1 15 3 0 virus 0.833 7736.071 +18 8745 MT554537.1 15 0 2 virus 0.882 7713.09 +19 8366 MN059208.1 14 1 1 virus 0.875 7320.25 +20 7242 AJ534983.1 14 0 0 virus 1.0 7242.0 +21 7702 KX008574.1 14 1 0 virus 0.933 7185.966 +22 8644 MN059273.1 14 0 3 virus 0.824 7122.656 +23 7343 KX034904.1 13 1 0 virus 0.929 6821.647 +24 7341 KX034878.1 13 1 0 virus 0.929 6819.789000000001 +25 6791 JN710440.1 13 0 0 virus 1.0 6791.0 +26 6436 MT752813.1 12 0 0 virus 1.0 6436.0 +27 6436 MT752690.1 12 0 0 virus 1.0 6436.0 +28 6436 MT752919.1 12 0 0 virus 1.0 6436.0 +29 6395 HE818411.1 12 0 0 virus 1.0 6395.0 +30 6355 EF469769.1 12 0 0 virus 1.0 6355.0 +31 6226 LC125633.1 12 0 0 virus 1.0 6226.0 +32 7466 MN504765.1 11 1 2 virus 0.786 5868.276 +33 6383 MF002491.1 11 1 0 virus 0.917 5853.211 +34 8361 MZ148109.1 11 5 0 virus 0.688 5752.3679999999995 +35 5664 LT991639.1 11 0 0 virus 1.0 5664.0 +36 6549 MT317167.1 11 2 0 virus 0.846 5540.454 +37 7010 BK011046.1 11 3 0 virus 0.786 5509.860000000001 +38 5266 MN497809.1 10 0 0 virus 1.0 5266.0 +39 5078 KY769710.1 10 0 0 virus 1.0 5078.0 +40 7377 KC847061.1 9 5 0 virus 0.643 4743.411 +41 8434 KF030878.2 9 7 0 virus 0.562 4739.908 +42 5398 MT892660.1 8 0 2 virus 0.8 4318.400000000001 +43 4224 EF155982.1 8 0 0 virus 1.0 4224.0 +44 4059 MN101211.1 8 0 0 virus 1.0 4059.0 +45 8607 MW629381.1 7 10 0 plant 0.412 3546.084 +46 3334 LC066453.1 6 0 0 virus 1.0 3334.0 +47 3449 MN160358.1 5 1 0 virus 0.833 2873.017 +48 2824 NC_015324.1 5 0 0 virus 1.0 2824.0 +49 2797 JF909142.1 5 0 0 virus 1.0 2797.0 +50 2789 JX025360.1 5 0 0 virus 1.0 2789.0 +51 2781 MG250124.1 5 0 0 virus 1.0 2781.0 +52 2781 KC106643.1 5 0 0 virus 1.0 2781.0 +53 2781 KX024650.1 5 0 0 virus 1.0 2781.0 +54 2778 GU180085.1 5 0 0 virus 1.0 2778.0 +55 2773 LN846605.1 5 0 0 virus 1.0 2773.0 +56 2768 JN604500.1 5 0 0 virus 1.0 2768.0 +57 2767 KU569582.1 5 0 0 virus 1.0 2767.0 +58 2762 FN554528.1 5 0 0 virus 1.0 2762.0 +59 2761 MK757212.1 5 0 0 virus 1.0 2761.0 +60 2761 NC_023312.1 5 0 0 virus 1.0 2761.0 +61 2751 AJ558124.1 5 0 0 virus 1.0 2751.0 +62 2750 KJ536097.1 5 0 0 virus 1.0 2750.0 +63 2749 KJ473695.1 5 0 0 virus 1.0 2749.0 +64 2743 MT298220.1 5 0 0 virus 1.0 2743.0 +65 2741 KC019309.1 5 0 0 virus 1.0 2741.0 +66 2739 JN082236.1 5 0 0 virus 1.0 2739.0 +67 2738 MH577756.1 5 0 0 virus 1.0 2738.0 +68 2738 MH577693.1 5 0 0 virus 1.0 2738.0 +69 2738 AY184487.3 5 0 0 virus 1.0 2738.0 +70 2737 MN630281.1 5 0 0 virus 1.0 2737.0 +71 2736 KX302711.1 5 0 0 virus 1.0 2736.0 +72 2732 AJ558125.1 5 0 0 virus 1.0 2732.0 +73 2724 HE979787.1 5 0 0 virus 1.0 2724.0 +74 3808 HM125550.1 5 0 2 virus 0.714 2718.912 +75 2705 KM229922.1 5 0 0 virus 1.0 2705.0 +76 2698 HQ264186.1 5 0 0 virus 1.0 2698.0 +77 2693 MW426877.1 5 0 0 virus 1.0 2693.0 +78 2690 MT592862.1 5 0 0 virus 1.0 2690.0 +79 2662 BK010711.1 5 0 0 virus 1.0 2662.0 +80 2659 NC_055586.1 5 0 0 virus 1.0 2659.0 +81 2640 MW273384.1 5 0 0 virus 1.0 2640.0 +82 2638 JX857691.1 5 0 0 virus 1.0 2638.0 +83 3164 MH999327.1 5 1 0 virus 0.833 2635.612 +84 2630 EF585288.1 5 0 0 virus 1.0 2630.0 +85 2626 NC_055544.1 5 0 0 virus 1.0 2626.0 +86 2617 KF670624.1 5 0 0 virus 1.0 2617.0 +87 2617 KJ939838.1 5 0 0 virus 1.0 2617.0 +88 2615 KJ939772.1 5 0 0 virus 1.0 2615.0 +89 2593 KC004071.1 5 0 0 virus 1.0 2593.0 +90 2578 NC_040181.1 5 0 0 virus 1.0 2578.0 +91 2574 KY559626.1 5 0 0 virus 1.0 2574.0 +92 2542 KX255723.1 5 0 0 virus 1.0 2542.0 +93 2525 NC_038803.1 5 0 0 virus 1.0 2525.0 +94 8530 EU191905.1 5 12 0 plant 0.294 2507.8199999999997 +95 3382 KX831466.1 4 0 2 virus 0.667 2255.7940000000003 +96 2752 MF669103.1 4 1 0 virus 0.8 2201.6 +97 2752 KY965909.1 4 1 0 virus 0.8 2201.6 +98 2690 EU628633.1 4 1 0 virus 0.8 2152.0 +99 2650 KC004114.1 4 1 0 virus 0.8 2120.0 +100 2101 LC062895.1 4 0 0 virus 1.0 2101.0 +101 1950 KX650619.1 3 0 0 virus 1.0 1950.0 +102 1934 MT454000.1 3 0 0 virus 1.0 1934.0 +103 1916 MK860580.1 3 0 0 virus 1.0 1916.0 +104 1814 EF155989.1 3 0 0 virus 1.0 1814.0 +105 1802 MN103237.1 3 0 0 virus 1.0 1802.0 +106 1801 HM188512.1 3 0 0 virus 1.0 1801.0 +107 2971 MT921846.1 3 2 0 virus 0.6 1782.6 +108 2354 JX971985.1 3 1 0 virus 0.75 1765.5 +109 1677 HQ916906.1 3 0 0 virus 1.0 1677.0 +110 1629 BK014344.1 3 0 0 virus 1.0 1629.0 +111 1620 JQ619050.1 3 0 0 virus 1.0 1620.0 +112 2689 KM229962.1 3 2 0 virus 0.6 1613.3999999999999 +113 2685 KM230022.1 3 2 0 virus 0.6 1611.0 +114 1583 MK731958.1 3 0 0 virus 1.0 1583.0 +115 1560 JF894259.1 3 0 0 virus 1.0 1560.0 +116 2584 KM229778.1 3 2 0 virus 0.6 1550.3999999999999 +117 1966 NC_033770.1 2 0 1 virus 0.667 1311.3220000000001 +118 2378 MN527514.1 2 0 2 bacteria 0.5 1189.0 +119 2905 MF163261.1 2 3 0 plant 0.4 1162.0 +120 2876 JQ266228.1 2 0 3 bacteria 0.4 1150.4 +121 2206 KX013372.1 2 0 2 bacteria 0.5 1103.0 +122 3812 KY662077.1 2 5 0 plant 0.286 1090.232 +123 1607 KJ606247.1 2 1 0 virus 0.667 1071.8690000000001 +124 8920 MF159044.1 2 15 0 plant 0.118 1052.56 +125 2566 KC172674.1 2 3 0 plant 0.4 1026.4 +126 2947 KM114548.1 1 4 0 plant 0.2 589.4 +127 1725 GU127657.1 1 2 0 plant 0.333 574.4250000000001 +128 6980 MN106984.1 1 12 0 plant 0.077 537.46 +129 2594 MT013234.1 1 4 0 plant 0.2 518.8000000000001 +130 1649 NC_034981.1 0 3 0 plant 0.0 0.0 +131 3929 MF540775.1 0 7 0 plant 0.0 0.0 +132 8913 KC261956.1 0 17 0 plant 0.0 0.0 +133 2804 KF438744.1 0 5 0 plant 0.0 0.0 +134 1496 KF144729.1 5 0 0 virus 1.0 1496.0 +135 1404 AB643672.1 5 0 0 virus 1.0 1404.0 +136 1395 MG019144.1 5 0 0 virus 1.0 1395.0 +137 1371 GU797470.1 5 0 0 virus 1.0 1371.0 +138 1369 DQ988082.1 5 0 0 virus 1.0 1369.0 +139 1358 MK357282.1 5 0 0 virus 1.0 1358.0 +140 1356 FJ460213.1 5 0 0 virus 1.0 1356.0 +141 1298 FM883186.1 5 0 0 virus 1.0 1298.0 +142 1194 MH894504.1 4 0 0 virus 1.0 1194.0 +143 1194 MT955040.1 4 0 0 virus 1.0 1194.0 +144 1193 LC114511.1 4 0 0 virus 1.0 1193.0 +145 1465 D84413.1 4 1 0 virus 0.8 1172.0 +146 1444 HQ452354.1 4 0 1 virus 0.8 1155.2 +147 1151 MN901875.1 4 0 0 virus 1.0 1151.0 +148 1141 KJ161238.1 4 0 0 virus 1.0 1141.0 +149 1139 MN167135.1 4 0 0 virus 1.0 1139.0 +150 1137 HE573849.1 4 0 0 virus 1.0 1137.0 +151 1137 HE573795.1 4 0 0 virus 1.0 1137.0 +152 1133 HM243476.1 4 0 0 virus 1.0 1133.0 +153 1404 FR692977.1 4 1 0 virus 0.8 1123.2 +154 1395 MG019187.1 4 1 0 virus 0.8 1116.0 +155 1111 KU687077.1 4 0 0 virus 1.0 1111.0 +156 1105 AF127934.1 4 0 0 virus 1.0 1105.0 +157 1370 EU384589.1 4 1 0 virus 0.8 1096.0 +158 1361 LN880826.1 4 1 0 virus 0.8 1088.8 +159 1084 HQ185575.1 4 0 0 virus 1.0 1084.0 +160 1350 MK098183.1 4 1 0 virus 0.8 1080.0 +161 1076 KM607549.1 4 0 0 virus 1.0 1076.0 +162 1075 KC466374.1 4 0 0 virus 1.0 1075.0 +163 1074 AJ875102.1 4 0 0 virus 1.0 1074.0 +164 1059 AF548519.1 4 0 0 virus 1.0 1059.0 +165 1321 MN929719.1 4 0 1 virus 0.8 1056.8 +166 1321 MF044051.1 4 1 0 virus 0.8 1056.8 +167 1035 KY473719.1 4 0 0 virus 1.0 1035.0 +168 1035 KY473707.1 4 0 0 virus 1.0 1035.0 +169 1293 KC007531.1 4 1 0 virus 0.8 1034.4 +170 1027 KF711177.1 4 0 0 virus 1.0 1027.0 +171 1022 LC010785.1 4 0 0 virus 1.0 1022.0 +172 1020 KY473727.1 4 0 0 virus 1.0 1020.0 +173 1006 FJ705252.1 4 0 0 virus 1.0 1006.0 +174 1002 KC979054.1 4 0 0 virus 1.0 1002.0 +175 1002 KU870774.1 4 0 0 virus 1.0 1002.0 +176 999 MH626102.1 3 0 0 virus 1.0 999.0 +177 981 MG678058.1 3 0 0 virus 1.0 981.0 +178 969 JN861003.1 3 0 0 virus 1.0 969.0 +179 944 AF103789.1 3 0 0 virus 1.0 944.0 +180 939 JN131576.1 3 0 0 virus 1.0 939.0 +181 938 KX420987.1 3 0 0 virus 1.0 938.0 +182 920 HM035070.1 3 0 0 virus 1.0 920.0 +183 909 MT542859.1 3 0 0 virus 1.0 909.0 +184 909 JN995535.1 3 0 0 virus 1.0 909.0 +185 1200 GU904131.1 3 1 0 virus 0.75 900.0 +186 900 EU196425.1 3 0 0 virus 1.0 900.0 +187 894 MH974475.1 3 0 0 virus 1.0 894.0 +188 885 MF773983.1 3 0 0 virus 1.0 885.0 +189 873 KC985038.1 3 0 0 virus 1.0 873.0 +190 872 MT656393.1 3 0 0 virus 1.0 872.0 +191 872 MT656427.1 3 0 0 virus 1.0 872.0 +192 871 KR076680.1 3 0 0 virus 1.0 871.0 +193 867 DQ364987.1 3 0 0 virus 1.0 867.0 +194 1419 AY366417.1 3 2 0 virus 0.6 851.4 +195 849 HM768172.1 3 0 0 virus 1.0 849.0 +196 1132 MK929579.1 3 1 0 virus 0.75 849.0 +197 849 HM768183.1 3 0 0 virus 1.0 849.0 +198 846 MN814413.1 3 0 0 virus 1.0 846.0 +199 1410 AB457617.1 3 2 0 virus 0.6 846.0 +200 837 KU743350.1 3 0 0 virus 1.0 837.0 +201 1374 KJ789902.1 3 2 0 virus 0.6 824.4 +202 1370 KY271069.1 3 2 0 virus 0.6 822.0 +203 822 JQ361098.1 3 0 0 virus 1.0 822.0 +204 821 MG717790.1 3 0 0 virus 1.0 821.0 +205 1366 LN831969.1 3 2 0 virus 0.6 819.6 +206 1086 KF710809.1 3 0 1 virus 0.75 814.5 +207 1086 KF710849.1 3 0 1 virus 0.75 814.5 +208 1086 KM607344.1 3 1 0 virus 0.75 814.5 +209 810 JQ619096.1 3 0 0 virus 1.0 810.0 +210 810 JQ619105.1 3 0 0 virus 1.0 810.0 +211 1075 FJ859737.1 3 1 0 virus 0.75 806.25 +212 803 KC282369.1 3 0 0 virus 1.0 803.0 +213 801 JQ954315.1 3 0 0 virus 1.0 801.0 +214 795 MN955028.1 3 0 0 virus 1.0 795.0 +215 794 KX130921.1 3 0 0 virus 1.0 794.0 +216 1058 FJ463044.1 3 1 0 virus 0.75 793.5 +217 787 AM113814.1 3 0 0 virus 1.0 787.0 +218 1048 KM607216.1 3 1 0 virus 0.75 786.0 +219 1040 KM607230.1 3 1 0 virus 0.75 780.0 +220 777 HM180089.1 3 0 0 virus 1.0 777.0 +221 777 KJ494928.1 3 0 0 virus 1.0 777.0 +222 777 KU297996.1 3 0 0 virus 1.0 777.0 +223 776 MT037061.1 3 0 0 virus 1.0 776.0 +224 1032 MH746956.1 3 1 0 virus 0.75 774.0 +225 774 FR693101.1 3 0 0 virus 1.0 774.0 +226 1028 KF711199.1 3 1 0 virus 0.75 771.0 +227 771 KM275602.1 3 0 0 virus 1.0 771.0 +228 1028 KF711263.1 3 1 0 virus 0.75 771.0 +229 771 JF825866.1 3 0 0 virus 1.0 771.0 +230 1264 KX119438.1 3 2 0 virus 0.6 758.4 +231 751 KF156666.1 3 0 0 virus 1.0 751.0 +232 999 FJ262095.1 2 1 0 virus 0.667 666.3330000000001 +233 999 FJ262061.1 2 1 0 virus 0.667 666.3330000000001 +234 976 LC465418.1 2 1 0 virus 0.667 650.9920000000001 +235 956 KR065439.1 2 1 0 virus 0.667 637.652 +236 917 MK445316.1 2 0 1 virus 0.667 611.639 +237 1200 KJ849141.1 2 2 0 bacteria 0.5 600.0 +238 890 HQ335265.1 2 1 0 virus 0.667 593.63 +239 881 AJ884700.1 2 0 1 virus 0.667 587.6270000000001 +240 1164 KP233027.1 2 1 1 virus 0.5 582.0 +241 859 KF525380.1 2 1 0 virus 0.667 572.9530000000001 +242 1421 AY839627.1 2 3 0 plant 0.4 568.4 +243 836 LC223336.1 2 0 1 virus 0.667 557.6120000000001 +244 1372 MH643738.1 2 3 0 plant 0.4 548.8000000000001 +245 1365 MN240344.1 2 3 0 plant 0.4 546.0 +246 1342 FN806780.1 2 3 0 plant 0.4 536.8000000000001 +247 1061 KM607850.1 2 1 1 virus 0.5 530.5 +248 1060 KM607802.1 2 2 0 bacteria 0.5 530.0 +249 784 AM494507.1 2 1 0 virus 0.667 522.928 +250 1037 KM607814.1 2 1 1 virus 0.5 518.5 +251 1035 KY473725.1 2 2 0 bacteria 0.5 517.5 +252 768 MH182699.1 2 1 0 virus 0.667 512.2560000000001 +253 1023 JF828185.1 2 2 0 bacteria 0.5 511.5 +254 756 MH686308.1 2 0 1 virus 0.667 504.252 +255 1003 KX431385.1 2 2 0 bacteria 0.5 501.5 +256 975 KP866939.1 1 0 2 bacteria 0.333 324.675 +257 960 KF010516.1 1 0 2 bacteria 0.333 319.68 +258 945 KX418448.1 1 2 0 plant 0.333 314.685 +259 942 JF795548.1 1 2 0 plant 0.333 313.68600000000004 +260 939 KP232980.1 1 0 2 bacteria 0.333 312.687 +261 1369 KM880104.1 1 4 0 plant 0.2 273.8 +262 1367 LT600712.1 1 4 0 plant 0.2 273.40000000000003 +263 1083 KM607376.1 1 2 1 plant 0.25 270.75 +264 1346 LT674474.1 1 4 0 plant 0.2 269.2 +265 756 MW519386.1 1 2 0 plant 0.333 251.74800000000002 +266 1256 AM041944.1 1 4 0 plant 0.2 251.20000000000002 +267 1179 AJ493270.1 0 4 0 plant 0.0 0.0 +268 833 MK876224.1 0 3 0 plant 0.0 0.0 +269 1216 AB697885.1 0 4 0 plant 0.0 0.0 +270 822 MF043148.1 0 0 3 bacteria 0.0 0.0 +271 960 KC969470.1 0 3 0 plant 0.0 0.0 +272 756 MW519383.1 0 3 0 plant 0.0 0.0