comparison vsnp_add_zero_coverage.xml @ 4:e12ccc57875c draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsnp commit a80e3713d10fafef22e964198d59251adf955812"

3:2e863710a2f0

<tool id="vsnp_add_zero_coverage" name="vSNP: add zero coverage" version="@WRAPPER_VERSION@.1" profile="@PROFILE@">
    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <requirements>

        <conditional name="reference_cond">
            <expand macro="param_reference_source"/>
            <when value="cached">
                <param name="reference" type="select" label="Using reference genome">
                    <options from_data_table="fasta_indexes">
                        <filter type="data_meta" column="dbkey" key="dbkey" ref="bam_input"/>
                        <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected BAM file"/>
                    </options>
                </param>
            </when>
            <when value="history">

4:e12ccc57875c

<tool id="vsnp_add_zero_coverage" name="vSNP: add zero coverage" version="@WRAPPER_VERSION@.2" profile="@PROFILE@">
    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <requirements>

        <conditional name="reference_cond">
            <expand macro="param_reference_source"/>
            <when value="cached">
                <param name="reference" type="select" label="Using reference genome">
                    <options from_data_table="fasta_indexes">
                        <filter type="data_meta" column="1" key="dbkey" ref="bam_input"/>
                        <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected BAM file"/>
                    </options>
                </param>
            </when>
            <when value="history">