# HG changeset patch
# User iuc
# Date 1610615503 0
# Node ID 9b4011d5e8cb53e33d5ffd4aaad3b458b876d49d
# Parent  b03e88e7bb1d819bf5a734b73199570b98767eb7
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsnp commit a80e3713d10fafef22e964198d59251adf955812"

diff -r b03e88e7bb1d -r 9b4011d5e8cb vsnp_determine_ref_from_data.py
--- a/vsnp_determine_ref_from_data.py	Thu Dec 10 15:25:22 2020 +0000
+++ b/vsnp_determine_ref_from_data.py	Thu Jan 14 09:11:43 2021 +0000
@@ -197,12 +197,12 @@
 if __name__ == '__main__':
     parser = argparse.ArgumentParser()
 
-    parser.add_argument('--dnaprint_fields', action='append', dest='dnaprint_fields', nargs=2, required=False, default=None, help="List of dnaprints data table value, name and path fields")
-    parser.add_argument('--read1', action='store', dest='read1', required=True, default=None, help='Required: single read')
+    parser.add_argument('--dnaprint_fields', action='append', dest='dnaprint_fields', nargs=2, help="List of dnaprints data table value, name and path fields")
+    parser.add_argument('--read1', action='store', dest='read1', help='Required: single read')
     parser.add_argument('--read2', action='store', dest='read2', required=False, default=None, help='Optional: paired read')
-    parser.add_argument('--gzipped', action='store_true', dest='gzipped', default=False, help='Input files are gzipped')
-    parser.add_argument('--output_dbkey', action='store', dest='output_dbkey', required=True, default=None, help='Output reference file')
-    parser.add_argument('--output_metrics', action='store', dest='output_metrics', required=True, default=None, help='Output metrics file')
+    parser.add_argument('--gzipped', action='store_true', dest='gzipped', help='Input files are gzipped')
+    parser.add_argument('--output_dbkey', action='store', dest='output_dbkey', help='Output reference file')
+    parser.add_argument('--output_metrics', action='store', dest='output_metrics', help='Output metrics file')
 
     args = parser.parse_args()