# HG changeset patch
# User jackcurragh
# Date 1649682651 0
# Node ID 8ed17d8c3a085ffcdaf0bba17d0eac080d86fbed
# Parent  77219e2f7ddc2e138eadc47195582a658e58e896
Uploaded

diff -r 77219e2f7ddc -r 8ed17d8c3a08 bowtie_rRNA_removal_wrapper/tool-data/bowtie_indices.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bowtie_rRNA_removal_wrapper/tool-data/bowtie_indices.loc.sample	Mon Apr 11 13:10:51 2022 +0000
@@ -0,0 +1,23 @@
+sacCer9rRNA	sacCer9	Saccharomyces cerevisiae rRNA	/data2/indices/bowtie/ncRNA/sacCer_9/sacCer_9_rRNA
+sacCer9tRNA	sacCer9	Saccharomyces cerevisiae tRNA	/data2/indices/bowtie/ncRNA/sacCer_9/sacCer_9_tRNA
+sacCer9rRNAtRNA	sacCer9	Saccharomyces cerevisiae rRNA and tRNA	/data2/indices/bowtie/ncRNA/sacCer_9/sacCer_9_rRNA_tRNA
+
+hg38rRNA	hg38	Homo sapiens rRNA	/data2/indices/bowtie/ncRNA/homo_sapiens_hg38/homo_sapiens_hg38_rRNA
+hg38tRNA	hg38	Homo sapiens tRNA	/data2/indices/bowtie/ncRNA/homo_sapiens_hg38/homo_sapiens_hg38_tRNA
+hg38rRNAtRNA	hg38	Homo sapiens rRNA and tRNA	/data2/indices/bowtie/ncRNA/homo_sapiens_hg38/homo_sapiens_hg38_rRNA_tRNA
+
+e_colirRNA	e_coli	Escherichia coli rRNA	/data2/indices/bowtie/ncRNA/E_coli_K12_MG1655/E_coli_K12_MG1655_rRNA
+e_colitRNA	e_coli	Escherichia coli tRNA	/data2/indices/bowtie/ncRNA/E_coli_K12_MG1655/E_coli_K12_MG1655_tRNA
+e_colirRNAtRNA	e_coli	Escherichia coli rRNA and tRNA	/data2/indices/bowtie/ncRNA/E_coli_K12_MG1655/E_coli_K12_MG1655_rRNA_tRNA
+
+dm6rRNA	dm6	Drosophila melanogater rRNA	/data2/indices/bowtie/ncRNA/drosophila_melanogater_dm6/drosophila_melanogater_dm6_rRNA
+dm6tRNA	dm6	Drosophila melanogater tRNA	/data2/indices/bowtie/ncRNA/drosophila_melanogater_dm6/drosophila_melanogater_dm6_tRNA
+dm6rRNAtRNA	dm6	Drosophila melanogater rRNA and tRNA	/data2/indices/bowtie/ncRNA/drosophila_melanogater_dm6/drosophila_melanogater_dm6_rRNA_tRNA
+
+m28rRNA	m28	Mus musculus rRNA	/data2/indices/bowtie/ncRNA/mus_musculus_m28/mus_musculus_m28_rRNA
+m28tRNA	m28	Mus musculus tRNA	/data2/indices/bowtie/ncRNA/mus_musculus_m28/mus_musculus_m28_tRNA
+m28rRNAtRNA	m28	Mus musculus rRNA and tRNA	/data2/indices/bowtie/ncRNA/mus_musculus_m28/mus_musculus_m28_rRNA_tRNA
+
+araThalrRNA	araThal	Arabidopsis thaliana (TAIR10) rRNA	/data2/indices/bowtie/ncRNA/Arabidopsis/Arabidopsis_rRNA
+araThaltRNA	araThal	Arabidopsis thaliana (TAIR10) tRNA	/data2/indices/bowtie/ncRNA/Arabidopsis/Arabidopsis_tRNA
+araThalrRNAtRNA	araThal	Arabidopsis thaliana (TAIR10) rRNA and tRNA	/data2/indices/bowtie/ncRNA/Arabidopsis/Arabidopsis_rRNA_tRNA