comparison create_ribosome_profile/create_ribosome_profile.xml @ 9:11e3691f9260 draft

Uploaded

8:c2472a4400ef

<tool id="create_ribosome_profiles" name="Create Ribosome Profiles" version="1.1">
    <description>Produce a Sorted BED File of A-Site profiles of RPFs.</description>
    <requirements>
        <requirement type="package" version="1.79">biopython</requirement>
        <requirement type="package" version="0.19.0">pysam</requirement>
    </requirements>

                <option value="builtin">Use a built-in FASTA</option>
                <option value="history">Use one from the history</option>
            </param>
            <when value="builtin">
                <param name="input1_builtin" type="select" format="fasta" label="Select a reference" help="if your reference of interest is not listed - contact RiboGalaxy team">
                    <options from_data_table="builtin_fastas">
                        <filter type="sort_by" column="2" />
                        <validator type="no_options" message="No built-ins are available" />
                    </options>
                </param>
            </when>

9:11e3691f9260

<tool id="create_ribosome_profiles" name="Create Ribosome Profiles" version="1.1a">
    <description>Produce a Sorted BED File of A-Site profiles of RPFs.</description>
    <requirements>
        <requirement type="package" version="1.79">biopython</requirement>
        <requirement type="package" version="0.19.0">pysam</requirement>
    </requirements>

                <option value="builtin">Use a built-in FASTA</option>
                <option value="history">Use one from the history</option>
            </param>
            <when value="builtin">
                <param name="input1_builtin" type="select" format="fasta" label="Select a reference" help="if your reference of interest is not listed - contact RiboGalaxy team">
                    <options from_data_table="builtin_fastas2">
                        <filter type="sort_by" column="2" />
                        <validator type="no_options" message="No built-ins are available" />
                    </options>
                </param>
            </when>