Mercurial > repos > jackcurragh > ribogalaxy_create_ribosome_profile
diff create_ribosome_profile/tool-data/builtin_fastas.loc.sample @ 9:11e3691f9260 draft
Uploaded
| author | triasteran |
|---|---|
| date | Mon, 13 Feb 2023 15:18:47 +0000 |
| parents | c2472a4400ef |
| children | 65fd47e945fe |
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--- a/create_ribosome_profile/tool-data/builtin_fastas.loc.sample Fri May 27 10:12:34 2022 +0000 +++ b/create_ribosome_profile/tool-data/builtin_fastas.loc.sample Mon Feb 13 15:18:47 2023 +0000 @@ -1,8 +1,9 @@ mus_musculus_m28 m28 Mus musculus (m28) Genome /mnt/data/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m28.fa +mus_musculus_m10 m10 Mus musculus (m28) Genome /mnt/data/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m10.fa drosophila_melanogaster_dm6 dm6 Drosophila melanogaster (dm6) Genome /mnt/data/indices/bowtie/genome/drosophila_melanogater_dm6/dm6.fa sacCer_9 sacCer9 Saccharomyces cerevisiae (v9) Genome /mnt/data/indices/bowtie/genome/sacCer_9/S288C_reference_sequence_R9-1-1_19990210.fsa -sarCer_3 sacCer3 Saccharomyces cerevisiae (v3) Genome /mnt/data/indices/bowtie/genome/sacCer_3/S288C_reference_sequence_R3-1-1_19970730.fsa -E_coli_K12_MG1655 e_coli Escherichia coli (K12 MG1655) Genome /mnt/data/indices/bowtie/genome/E_coli_K12_MG1655/GCF_003368535.1_ASM336853v1_genomic.fna +sarCer_3 sacCer3 Saccharomyces cerevisiae (v3) Genome /mnt/data/indices/bowtie/genome/sacCer_3_gwips/sacCer3_genome.fa Arabidopsis araThal Arabidopsis thaliana (TAIR10) Genome /mnt/data/indices/bowtie/genome/Arabidopsis/GCF_000001735.4_TAIR10.1_genomic.fna homo_sapiens_hg19 hg19 Homo sapiens (hg19) Genome /mnt/data/indices/bowtie/genome/homo_sapiens_hg19/hg19.fa -homo_sapiens_hg38 hg38 Homo sapiens (hg38) Genome /mnt/data/indices/bowtie/genome/homo_sapiens_hg38/hg38.fa \ No newline at end of file +homo_sapiens_hg38 hg38 Homo sapiens (hg38) Genome /mnt/data/indices/bowtie/genome/homo_sapiens_hg38/hg38.fa +E_coli_K12_ASM584v2 e_coli_ASM584v2 Escherichia coli (K12 ASM584v2) Genome /mnt/data/indices/bowtie/genome/E_coli_gwips/ecoli_gwips_genome.fasta