# HG changeset patch # User triasteran # Date 1651147688 0 # Node ID dfed3b7be399391812ef591af83b516befa13e56 # Parent f55468c622fafb540fbdc08fa933779fe3af04eb Uploaded diff -r f55468c622fa -r dfed3b7be399 create_ribosome_profile/create_ribosome_profile.xml --- a/create_ribosome_profile/create_ribosome_profile.xml Wed Apr 20 15:44:08 2022 +0000 +++ b/create_ribosome_profile/create_ribosome_profile.xml Thu Apr 28 12:08:08 2022 +0000 @@ -1,7 +1,7 @@ - + Produce a sorted bed file from a sorted BAM file with the option of introducing an offset to the A-Site of a ribosome protected fragment. - biopython + biopython pysam python $__tool_directory__/bam_to_ribosome_profile.py ${input1} ${input2} ${input3} ${input4} ${output1}