comparison get_chrom_sizes/calculating_chrom.sizes.py @ 40:9b2bb994fc76 draft

Uploaded

39:16abcccd3905

record = False
for line in open(genome, 'r').readlines():
	if line[0] == '>':
		if record:
			records.append(record)
		record = [line.strip("\n").split(' ')[0][1:], 0]

	else:
		sequence = line.strip('\n')
		record[1] += len(sequence)

40:9b2bb994fc76

record = False
for line in open(genome, 'r').readlines():
	if line[0] == '>':
		if record:
			records.append(record)
		record = [line.strip("\n").split(' ')[0].split(" ")[0][1:], 0]

	else:
		sequence = line.strip('\n')
		record[1] += len(sequence)