Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes
diff get_chrom_sizes/calculating_chrom.sizes.py @ 4:c6a297d05c8e draft
Uploaded
author | jackcurragh |
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date | Fri, 13 May 2022 09:17:14 +0000 |
parents | cfdf764b9226 |
children | c96b29e00427 |
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--- a/get_chrom_sizes/calculating_chrom.sizes.py Thu Apr 21 10:39:18 2022 +0000 +++ b/get_chrom_sizes/calculating_chrom.sizes.py Fri May 13 09:17:14 2022 +0000 @@ -26,7 +26,11 @@ records.append(record) for seq_record in records: - output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n" + if prefix != 'none': + output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n" + else: + output_line = f"{seq_record[0]}\t{seq_record[1]}\n" + chromSizesoutput.write(output_line) chromSizesoutput.close()