annotate NCBI Blast reference example_files/InstrumentPageStarterJS.js @ 120:2729c2326235

Fix for Rikilt issue 13 Hit e-value and identity% should be taken from the hsp with the highest bit score. Previously each of these values was calculated independently. Also use arrays for cover calculation instead of python lists and refactor the hit_info() code a bit.
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 31 Jul 2014 16:14:36 +0200
parents 344cd76f6fd2
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
1 (function(){if(typeof ncbi==="undefined")ncbi={};if(ncbi.sg)typeof console!=="undefined"&&console.error&&console.error("The logging JavaScript was added twice in the document. Please include it one time.");else{ncbi.sg=function(){};ncbi.sg.getInstance=function(){if(!ncbi.sg._instance)ncbi.sg._instance=new ncbi.sg;return ncbi.sg._instance};ncbi.sg._instance=null;ncbi.sg._version="26";(function(){var a=navigator.cookieEnabled?true:false;if(typeof navigator.cookieEnabled==="undefined"&&!a){document.cookie=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
2 "testcookie";a=document.cookie.indexOf("testcookie")!==-1?true:false}ncbi.sg.isCookieEnabled=a})();ncbi.sg.appLogIgnore=["ncbi_sessionid","ncbi_clickdisabled"];ncbi.sg.prototype={init:function(){this.isProcessRunning=true;this._setUpMetaTagValues();this._setScrollingEnabled();if(this._cachedVals.ncbi_db&&this._cachedVals.ncbi_db.value.toLowerCase()=="pubmed"&&this._cachedVals.ncbi_report&&this._cachedVals.ncbi_report.value.toLowerCase()=="abstract"&&this._cachedVals.ncbi_resultcount&&this._cachedVals.ncbi_resultcount.value.toLowerCase()==
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
3 "1"||this._cachedVals.ncbi_db&&this._cachedVals.ncbi_db.value.toLowerCase()=="pmc"&&this._cachedVals.ncbi_report&&this._cachedVals.ncbi_report.value.toLowerCase()=="record"&&this._cachedVals.ncbi_type&&this._cachedVals.ncbi_type.value.toLowerCase()=="fulltext")ncbi.sg.isHoverEnabled=true;this._setUpPathParts();this._setUpCustomProps();this._addOnScrollListeners();this._send("init");this._scheduleDOMReadyPing();this._sendPrev();this._addPrintPing();this._setBeforeScrollDetails()},_vals:{},_cachedVals:{},
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
4 _hasInitRun:false,_readyPinged:false,_pathParts:{part1:"",part2:"",part3:"",part4:""},_scheduleDOMReadyPing:function(){var a=this,b=function(){return typeof jQuery!=="undefined"&&typeof jQuery.ui!=="undefined"&&typeof jQuery.ui.jig!=="undefined"?typeof jQuery.ui.jig.version!=="undefined"&&jQuery.ui.jig.version?jQuery.ui.jig.version:"unknown":"unknown"},d=function(){var k={},j=jQuery.ui.jig._foundWidgets;for(var t in j)k["jigWidget_"+t]=j[t];k.jigVersion=b();return k},c=function(){if(!a._readyPinged){var k=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
5 {};if(typeof jQuery!=="undefined"&&typeof jQuery.ui!=="undefined"&&typeof jQuery.ui.jig!=="undefined"&&typeof jQuery.ui.jig.scanned!=="undefined")if(jQuery.ui.jig.scanned){k=d();k.jsevent="domready";ncbi.sg._ping(k);a._readyPinged=true}else{if(typeof jQuery.ui.jig.scan!=="undefined"&&jQuery.ui.jig.scan){var j=jQuery.ui.jig.scan;jQuery.ui.jig.scan=function(){var t=j.apply(this,arguments);c();return t}}}else{k.jigVersion="nojig";k.jsevent="domready";ncbi.sg._ping(k);a._readyPinged=true}}};if(document.addEventListener){var e=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
6 function(){document.removeEventListener("DOMContentLoaded",e,false);c()};document.addEventListener("DOMContentLoaded",e)}else if(document.attachEvent){var g=function(){if(document.readyState==="complete"){document.detachEvent("onreadystatechange",g);c()}};document.attachEvent("onreadystatechange",g)}},_setScrollingEnabled:function(){try{ncbi.sg.isScrollingEnabled=false;var a=ncbi.sgAppsWithScrolling;if(typeof a!=="undefined")for(var b=0;b<a.length;b++){var d=true,c=a[b];for(var e in c)if(!this._cachedVals[e]||
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
7 this._cachedVals[e].value.toLowerCase()!=c[e]){d=false;break}if(d){ncbi.sg.isScrollingEnabled=true;break}}}catch(g){ncbi.sg.getInstance().noteEventData("jserror",{jserror:g.toString(),SELF_URL:window.location.href},["ncbi_sessionid","ncbi_phid"])}},_setUpMetaTagValues:function(){for(var a=document.getElementsByTagName("meta"),b=0;b<a.length;b++){var d=a[b].name;d.indexOf("ncbi_")===0&&this.addEntry(d,a[b].content)}},_setUpCachedMetaTagValues:function(a){for(var b=0;b<a.length;b++){var d=this._cachedVals[a[b]];
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
8 d&&this.addEntry(a[b],d.value)}},cachedNames:["ncbi_app","ncbi_db","ncbi_pcid","ncbi_pdid","ncbi_phid","ncbi_sessionid","ncbi_uidlist"],ignoreLengthRestrictions:["jserror","jserrorlocation"],addEntry:function(a,b){if(!(b===undefined||b.length===0)){if(b.length>100&&this.ignoreLengthRestrictions.indexOf(a)===-1)b=b.substr(0,100);this._cachedVals[a]={sProp:a,value:b}}},getVal:function(a){return typeof this._cachedVals[a]!=="undefined"&&this._cachedVals[a]&&typeof this._cachedVals[a].value!=="undefined"?
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
9 this._cachedVals[a].value:null},removeAllEntries:function(){for(var a={},b=this.cachedNames.length,d=0;d<b;d++){var c=this.cachedNames[d],e=this._cachedVals[c];if(e)a[c]=e}this._cachedVals=a;for(var g in this._pathParts)this._pathParts[g]=""},_setUpCustomProps:function(){var a=this._pathParts.part1,b=this._pathParts.part2.length>0?":"+this._pathParts.part2:"",d=this._pathParts.part3.length>0?":"+this._pathParts.part3:"",c=this._pathParts.part4.length>0?":"+this._pathParts.part4:"";a={pagename:a+b+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
10 d,server:window.location.hostname,sitesect2:a+b,subsect3:a+b+d,subsect4:a+b+d+c,heir1:(a+b+d+c).replace(/:/g,"|")};for(var e in a)this.addEntry(e,a[e]);this._sessionIdCheck();this._staticPageCheck();this._prevHitCheck();this._browserConfigurationSettings();this._hashCheck()},_staticPageCheck:function(){this._cachedVals.ncbi_app&&this._cachedVals.ncbi_app.value.length>0||this.addEntry("ncbi_app","static");this._cachedVals.ncbi_pdid&&this._cachedVals.ncbi_pdid.value.length>0||this.addEntry("ncbi_pdid",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
11 (document.title||"unknown").replace(/\s+/g,""))},_sessionIdCheck:function(){if(!(this._cachedVals.ncbi_sessionid&&this._cachedVals.ncbi_sessionid.value.length>0)){var a="";if(a.length===0){var b=this.getCookie("WebCubbyUser")||this.getCookie("WebEnv");if(b.length>0){b=unescape(b).split("@");if(b.length>1)a=b[b.length-1]}}if(a.length===0)a="NOSESSIONID";this.addEntry("ncbi_sessionid",a)}},getBrowserWidthHeight:function(){var a=this.getViewportWidth(),b=this.getViewportHeight();return{width:a,height:b}},
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
12 _browserConfigurationSettings:function(){var a=this.getBrowserWidthHeight();this.addEntry("browserwidth",a.width);this.addEntry("browserheight",a.height);this.addEntry("screenwidth",screen.width);this.addEntry("screenheight",screen.height);this.addEntry("screenavailwidth",screen.availWidth);this.addEntry("screenavailheight",screen.availHeight);if(document&&document.body){var b=document.body.scrollWidth,d=document.body.scrollHeight,c=d>a.height?"true":"false";this.addEntry("canscroll_x",b>a.width?
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
13 "true":"false");this.addEntry("canscroll_y",c);this.addEntry("scrollwidth",b);this.addEntry("scrollheight",d)}if(screen.colorDepth)this.addEntry("colorDepth",screen.colorDepth);else screen.pixelDepth&&this.addEntry("colorDepth",screen.pixelDepth)},_hashCheck:function(){var a=window.location.hash;if(a){a=a.replace("#","");this.addEntry("urlhash",a)}(a=window.location.search.match(/[?&]campaign=([^&]*)/))&&this.addEntry("campaign",a[1])},_createPHID:function(){var a=this._cachedVals.ncbi_sessionid.value,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
14 b=a.substr(0,15)+"9"+(new Date).getTime().toString(),d=a.length;b+=a.substr(d-(32-b.length),d);a={value:b};this.addEntry("ncbi_phid",b);return a},currentPageHitId:null,_prevHitCheck:function(){var a=this.getCookie("ncbi_prevPHID"),b=this._cachedVals.ncbi_phid;a.length>0&&this.addEntry("prev_phid",a);if(!b||!b.value||b.value.length===0)b=this._createPHID();this.currentPageHitId=b.value;var d=this;ncbi.sg._hasFocus&&d.setCookie("ncbi_prevPHID",b.value);var c=window.onfocus;window.onfocus=function(e){d.getCookie("ncbi_prevPHID")!==
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
15 b.value&&d.setCookie("ncbi_prevPHID",b.value);typeof c==="function"&&c(e)}},_setUpPathParts:function(){var a=this._cachedVals.ncbi_app,b=this._cachedVals.ncbi_db,d=this._cachedVals.ncbi_pdid,c=this._cachedVals.ncbi_pcid;this._pathParts.part1=a!==undefined?a.value:"";this._pathParts.part2=b!==undefined?b.value:"";this._pathParts.part3=d!==undefined?d.value:"";this._pathParts.part4=c!==undefined?c.value:""},getPerfStats:function(){var a=window.performance;if(!a)return{};var b=a.timing;if(b)b={dns:b.domainLookupEnd-
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
16 b.domainLookupStart,connect:b.connectEnd-b.connectStart,ttfb:b.responseStart-b.connectEnd,basePage:b.responseEnd-b.responseStart,frontEnd:b.loadEventStart-b.responseEnd};else return{};if(a=a.navigation){b.navType=a.type;b.redirectCount=a.redirectCount}return b},setPerfStats:function(a,b){var d=this.getPerfStats();for(var c in d){var e=d[c];if(e>=0){var g="jsperf_"+c;if(b)a[g]=e;else a.push(g+"="+e)}}},getExtraRenderStats:function(){var a={SELF_URL:encodeURIComponent(window.location.href)};if(typeof document!==
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
17 "undefined"&&typeof document.referrer!=="undefined")a.HTTP_REFERER=encodeURIComponent(document.referrer);return a},setExtraRenderStats:function(a){var b=this.getExtraRenderStats();for(var d in b)a.push(d+"="+b[d])},_send:function(a,b,d){if(typeof d==="undefined"||d===null)d=true;var c=[];if(a==="init"){c.push("jsevent=render");ncbi.sg.renderTime=new Date;if(typeof ncbi_startTime!=="undefined"){c.push("jsrendertime="+(ncbi.sg.renderTime-ncbi_startTime));ncbi.sg.loadTime&&c.push("jsloadtime="+(ncbi.sg.loadTime-
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
18 ncbi_startTime))}this.setPerfStats(c);this.setExtraRenderStats(c);c.push("cookieenabled="+(ncbi.sg.isCookieEnabled?"true":"false"))}for(var e in this._cachedVals)ncbi.sg.appLogIgnore.indexOf(e)===-1&&c.push(e+"="+encodeURIComponent(this._cachedVals[e].value));this._sendAl(c.join("&"),b,true,d);this._hasInitRun=true;var g=this;setTimeout(function(){g.isProcessRunning=false;g.runSGProcess()},300)},send:function(a,b){this._send(a,b,false)},_sendPrev:function(){var a=ncbi.sg.getInstance(),b=a.getCookie("clicknext");
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
19 if(b){ncbi.sg._ping(b);a.setCookie("clicknext","")}if(b=a.getCookie("prevsearch")){ncbi.sg._ping(b);a.setCookie("prevsearch","")}if(b=a.getCookie("unloadnext")){ncbi.sg._ping(b);a.setCookie("unloadnext","")}},_sendAl:function(a,b,d,c){if(typeof c==="undefined"||c===null)c=true;if(a.indexOf("jseventms")===-1)a+="&jseventms="+ncbi.sg.getInstance().getMillisecondsSinceSunday();a.match(/jsevent=search/i)&&this._storeNext("prevsearch",a.replace(/jsevent=search(next)?/i,"jsevent=searchnext"),null,c);a+=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
20 "&sgVersion="+ncbi.sg._version;if(a.indexOf("sgSource")===-1)a=this._setSgSource(a,c);c=window.location.port?":"+window.location.port:"";reqURL=typeof __ncbi_stat_url!=="undefined"?__ncbi_stat_url+"?"+a:window.location.protocol+"//"+window.location.hostname+c+"/stat?"+a;this.makeAjaxCall(reqURL,function(){typeof b==="function"&&b()},d)},sendAl:function(a,b,d){this._sendAl(a,b,d,false)},_processingQueue:[],isProcessRunning:false,addSGProcess:function(a){this._processingQueue.push(a)},getSGProcess:function(a){return this._processingQueue.shift(a)},
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
21 runSGProcess:function(){if(this.isProcessRunning||this._processingQueue.length===0||!this._hasInitRun)return false;this.isProcessRunning=true;this.removeAllEntries();var a=this.getSGProcess();this._setUpCachedMetaTagValues(a.metadata);this.addEntry("jsevent",a.eventName);for(var b in a.props)this.addEntry(b,a.props[b]);this._send(a.eventName,a.callbackFnc);var d=this;setTimeout(function(){d.isProcessRunning=false;d.runSGProcess()},300)},noteEventData:function(a,b,d,c){this.addSGProcess({eventName:a,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
22 props:b,metadata:d,callback:c});this.runSGProcess()},setCookie:function(a,b,d){if(window.sessionStorage)try{sessionStorage.setItem(a,b)}catch(c){}var e=new Date;d!==null&&e.setDate(e.getDate()+d);document.cookie=a+"="+escape(b)+(d===null?"":"; expires="+e.toGMTString())+"; domain="+escape(".nih.gov")+"; path=/"},_setSgSource:function(a,b){a+="&sgSource="+(b?"native":"api");return a},_storeNext:function(a,b,d,c){if(typeof c==="undefined"||c===null)c=true;b=this._setSgSource(b,c);this.setCookie(a,b,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
23 d)},getCookie:function(a){var b;if(window.sessionStorage){try{b=sessionStorage.getItem(a)||""}catch(d){b=""}if(b.length>0)return b}if(document.cookie.length>0){b=document.cookie.indexOf(a+"=");if(b!==-1){b=b+a.length+1;a=document.cookie.indexOf(";",b);if(a===-1)a=document.cookie.length;return unescape(document.cookie.substring(b,a))}}return""},getTransport:function(){var a=null;if(window.XMLHttpRequest)try{a=new XMLHttpRequest;this.getTransport=function(){return new XMLHttpRequest}}catch(b){a=null}if(window.ActiveXObject&&
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
24 a===null)try{a=new ActiveXObject("Msxml2.XMLHTTP");this.getTransport=function(){return new ActiveXObject("Msxml2.XMLHTTP")}}catch(d){try{a=new ActiveXObject("Microsoft.XMLHTTP");this.getTransport=function(){return new ActiveXObject("Microsoft.XMLHTTP")}}catch(c){a=false}}if(a===null)this.getTransport=function(){return null};return this.getTransport()},makeAjaxCall:function(a,b,d){var c=this.getTransport();c._ncbi_skipOverride=true;c.open("GET",a,d);if(d)c.onreadystatechange=function(){c.readyState===
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
25 4&&b(c)};ncbi.sg.lastPing=c;c.send(null);return c},scrollDetails:{maxScroll_x:0,maxScroll_y:0,currScroll_x:0,currScroll_y:0,hasScrolled:false},scrollEventDetails:{xTenths:0,yTenths:0,xMax:0,yMax:0},_getScrollXYPx:function(){return[window.pageXOffset||document.documentElement.scrollLeft||document.body.scrollLeft||0,window.pageYOffset||document.documentElement.scrollTop||document.body.scrollTop||0]},_getScrollXY:function(){var a=this.getViewportHeight(),b=this.getViewportWidth(),d=document.body.scrollHeight,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
26 c=document.body.scrollWidth,e=this._getScrollXYPx(),g=Math.round(e[1]/a*10)/10;return{xRel:Math.round(e[0]/b*10)/10,yRel:g,viewportHeight:a,viewportWidth:b,pageHeight:d,pageWidth:c}},_addOnScrollListeners:function(){var a=window.onscroll,b=this;window.onscroll=function(){if(ncbi.sg.isScrollingEnabled){b._setScrollDetails();b.scrollDetails.hasScrolled=true;b._addScrollEvent()}else{b._setScrollDetails();b.scrollDetails.hasScrolled=true}if(typeof a==="function")return a()}},getViewportHeight:function(){return window.innerHeight?
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
27 window.innerHeight:document.documentElement&&document.documentElement.clientHeight?document.documentElement.clientHeight:document.body!==null?document.body.clientHeight:"NA"},getViewportWidth:function(){return window.innerWidth?window.innerWidth:document.documentElement&&document.documentElement.clientWidth?document.documentElement.clientWidth:document.body!==null?document.body.clientWidth:"NA"},_setScrollDetails:function(){this.scrollDetails.currScroll_y=window.pageYOffset||document.documentElement.scrollTop||
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
28 document.body.scrollTop||0;this.scrollDetails.currScroll_x=window.pageXOffset||document.documentElement.scrollLeft||document.body.scrollLeft||0;this.getViewportWidth();this.getViewportHeight();if(this.scrollDetails.maxScroll_y<this.scrollDetails.currScroll_y)this.scrollDetails.maxScroll_y=this.scrollDetails.currScroll_y;if(this.scrollDetails.maxScroll_x<this.scrollDetails.currScroll_x)this.scrollDetails.maxScroll_x=this.scrollDetails.currScroll_x},isVisible:function(a){var b=this.findEffectiveStyleProperty(a,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
29 "visibility");a=this._isDisplayed(a);return b!="hidden"&&a},_isDisplayed:function(a){if(this.findEffectiveStyleProperty(a,"display")=="none")return false;if(a.parentNode.style)return this._isDisplayed(a.parentNode);return true},findEffectiveStyleProperty:function(a,b){var d=this.findEffectiveStyle(a)[b];if(d=="inherit"&&a.parentNode.style)return this.findEffectiveStyleProperty(a.parentNode,b);return d},findEffectiveStyle:function(a){if(a.style!=undefined){if(window.getComputedStyle)return window.getComputedStyle(a,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
30 null);if(a.currentStyle)return a.currentStyle;if(window.document.defaultView&&window.document.defaultView.getComputedStyle)return window.document.defaultView.getComputedStyle(a,null);return null}},findElementPos:function(a,b,d){var c=0,e=0;if(a.offsetLeft)c+=parseInt(a.offsetLeft);if(a.offsetTop)e+=parseInt(a.offsetTop);if(a.scrollTop&&a.scrollTop>0){e-=parseInt(a.scrollTop);d=true}if(a.scrollLeft&&a.scrollLeft>0){c-=parseInt(a.scrollLeft);b=true}if(a.offsetParent){b=this.findElementPos(a.offsetParent,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
31 b,d);if(b==-1)return-1;c+=b[0];e+=b[1]}else if(a.ownerDocument){var g=a.ownerDocument.defaultView;if(!g&&a.ownerDocument.parentWindow)g=a.ownerDocument.parentWindow;if(g){var k=g.pageXOffset!==undefined?g.pageXOffset:(a.document.documentElement||a.document.body.parentNode||a.document.body).scrollLeft;a=g.pageYOffset!==undefined?g.pageYOffset:(a.document.documentElement||a.document.body.parentNode||a.document.body).scrollTop;if(!d&&a&&a>0)e-=parseInt(a);if(!b&&k&&k>0)c-=parseInt(k);if(g.frameElement){b=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
32 this.findElementPos(g.frameElement);if(b==-1)return-1;c+=b[0];e+=b[1]}}}return[c,e]},addObjData:function(a,b){for(var d in b)a[d]=b[d]},getJoinedData:function(a){var b=[];for(var d in a)b.push(d+"="+encodeURIComponent(a[d]));return b.join("&")},addScrollHeadingData:function(a,b){var d=this.scrollEventDetails.headings;if(d){a["numHeadings."+this._scrollOrder+".scrollInfo"]=d.length;for(var c=0;c<d.length;c++){var e=d[c];if(e.visible){var g={};if(e.innerText)g["innerText."+e.index+".headings."+this._scrollOrder+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
33 ".scrollInfo"]=e.innerText;if(e.id)g["id."+e.index+".headings."+this._scrollOrder+".scrollInfo"]=e.id;g["tagName."+e.index+".headings."+this._scrollOrder+".scrollInfo"]=e.tagName;b=b?b:1800;this.getJoinedData(a).length+this.getJoinedData(g).length<b&&this.addObjData(a,g)}}}return a},getVisibleHeadings:function(){for(var a=[],b=document.getElementsByTagName("*"),d=-1,c=0;c<b.length;c++){for(var e=b[c],g=false,k=e.tagName.toLowerCase(),j=0;j<7;j++)if(k=="h"+j)g=true;if(g){d+=1;j=this.findElementPos(e);
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
34 g=j[1];j=j[0];var t=e.offsetHeight,y=e.offsetWidth,A=this.getViewportHeight(),B=this.getViewportWidth(),w={},v=e.getAttribute("id")||e.id;if(v)w.id=v;if(v=(e.getAttribute("innerText")||e.innerText||e.getAttribute("textContent")||e.textContent||"").replace(/^\s+|\s+$/g,""))w.innerText=v.substring(0,50);w.index=d;w.tagName=k;if(g+t>=0&&g<=A&&j+y>=0&&j<=B)if(this.isVisible(e)){w.visible=true;a.push(w)}}}return a},_setBeforeScrollDetails:function(a){this._lastScroll=a?a:null;a=this._getScrollXY();var b=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
35 a.yRel;this.scrollEventDetails.xTenths=Math.round(a.xRel*10);this.scrollEventDetails.yTenths=Math.round(b*10);this.scrollEventDetails.xMax=Math.max(this.scrollEventDetails.xTenths,this.scrollEventDetails.xMax);this.scrollEventDetails.yMax=Math.max(this.scrollEventDetails.yTenths,this.scrollEventDetails.yMax);this.scrollEventDetails.headings=this.getVisibleHeadings()},getScrollDetails:function(a,b){if(!ncbi.sg.isScrollingEnabled){this._setScrollDetails();return this.scrollDetails}var d=this.scrollEventDetails;
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
36 d.tstamp=(new Date).getTime();var c=this._getScrollXY(),e=null;if(b||!this._lastScroll||d.tstamp-this._lastScroll>1E3){this._scrollOrder=this._scrollOrder!=undefined?this._scrollOrder+1:0;b="yTenths."+this._scrollOrder+".scrollInfo";e="xTenths."+this._scrollOrder+".scrollInfo";var g="maxXTenths."+this._scrollOrder+".scrollInfo",k="maxYTenths."+this._scrollOrder+".scrollInfo",j={};j["duration."+this._scrollOrder+".scrollInfo"]=this._lastScroll?d.tstamp-this._lastScroll:new Date-ncbi.sg.loadTime;j[e]=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
37 this.scrollEventDetails.xTenths;j[b]=this.scrollEventDetails.yTenths;j[g]=this.scrollEventDetails.xMax;j[k]=this.scrollEventDetails.yMax;j["viewportHeight."+this._scrollOrder+".scrollInfo"]=c.viewportHeight;j["viewportWidth."+this._scrollOrder+".scrollInfo"]=c.viewportWidth;j["maxPossibleScrollTenthsY."+this._scrollOrder+".scrollInfo"]=Math.round((c.pageHeight/c.viewportHeight-1)*10);j["maxPossibleScrollTenthsX."+this._scrollOrder+".scrollInfo"]=Math.round((c.pageWidth/c.viewportWidth-1)*10);e=j=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
38 this.addScrollHeadingData(j,a)}this._setBeforeScrollDetails(d.tstamp);return e},getScrollDetailsAr:function(a,b){var d=[];a=this.getScrollDetails(a,b);for(var c in a)d.push(c+"="+encodeURIComponent(a[c]));return d},addScrollDetailsAr:function(a,b,d){b=this.getScrollDetailsAr(b,d);for(d=0;d<b.length;d++)a.push(b[d])},addScrollDetails:function(a,b,d){b=this.getScrollDetails(b,d);for(var c in b)a[c]=b[c]},trimScrollDetails:function(){},_addScrollEvent:function(){try{var a=this.getScrollDetails();if(a){a.jsevent=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
39 "scroll";ncbi.sg._ping(a)}}catch(b){ncbi.sg.getInstance().noteEventData("jserror",{jserror:b.toString(),SELF_URL:window.location.href},["ncbi_sessionid","ncbi_phid"])}},_addPrintPing:function(){function a(){var c=document.createElement("style");c.type="text/css";var e=document.createElement("style");e.type="text/css";e.media="print";for(var g=["jsevent=print"],k=0;k<b.cachedNames.length;k++){var j=b.cachedNames[k],t=b._cachedVals[j];t&&j!=="ncbi_sessionid"&&g.push(j+"="+encodeURIComponent(t.value))}g=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
40 ".print-log { position:absolute;left:-10000px;top:auto;width:1px;height:1px;overflow:hidden; }.print-log li { list-style-image: url('/stat?"+g.join("&")+"'); }";if(e.styleSheet){e.styleSheet.cssText=g;c.styleSheet.cssText=".print-log { position:absolute;left:-10000px;top:auto;width:1px;height:1px;overflow:hidden; }"}else{e.appendChild(document.createTextNode(g));c.appendChild(document.createTextNode(".print-log { position:absolute;left:-10000px;top:auto;width:1px;height:1px;overflow:hidden; }"))}g=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
41 document.getElementsByTagName("head")[0];g.appendChild(e);g.appendChild(c);c=document.createElement("ul");c.className="print-log";e=document.createElement("li");c.appendChild(e);document.body.appendChild(c)}var b=this;if(typeof jQuery!=="undefined")jQuery(a);else{var d=window.onload;window.onload=function(c){d&&d(c);a()}}},getMillisecondsSinceSunday:function(){var a=new Date,b=new Date;b.setDate(b.getDate()-b.getDay());b.setHours(0);b.setMinutes(0);b.setSeconds(0);b.setMilliseconds(0);return(a-b).toString(36)}};
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
42 ncbi.sg.lastPing=null;ncbi.sg.hasNotedErrorEvent=false;(function(){function a(){ncbi.sg.getInstance().setCookie("ncbi_prevPHID",ncbi.sg.getInstance().currentPageHitId);if(y.length>0)for(;y.length>0;)d(y.pop());var f={jsevent:"unload",ncbi_pingaction:"unload"};if(typeof ncbi_startTime!=="undefined"){f.ncbi_timeonpage=new Date-ncbi_startTime;if(typeof ncbi_onloadTime!=="undefined"&&ncbi_onloadTime)f.ncbi_onloadTime=ncbi_onloadTime-ncbi_startTime}var i=ncbi.sg.getInstance();i.setPerfStats(f,true);i.addScrollDetails(f,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
43 1800-i.getJoinedData(f).length,true);if(!w){ncbi.sg._ping(f);var m="";for(var l in f)m+=l+"="+(l==="jsevent"?"unloadnext":f[l])+"&";m+="ncbi_phid="+i.currentPageHitId;i._storeNext("unloadnext",m,null)}w=true}function b(f){for(var i=y.length-1;i>=-1;i--)if(y[i]===f){y.slice(i,1);break}d(f)}function d(f,i){if(A.indexOf(f.tstamp)===-1){A.push(f.tstamp);B.push(f);c("click",f,i)}}function c(f,i,m,l){if(typeof l==="undefined"||l===null)l=true;var n=f==="click"?"link":"elem",h=i.link,o=i.evt,p=h.id||"",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
44 x=h.name||"",F=h.sid||"",G=h.href||"",C=h.innerText||h.textContent||"";if(C.length>50)C=C.substr(0,50);var H=h.getAttribute?h.getAttribute("ref")||h.ref||"":"",I=h.className?h.className.replace(/^\s?/,"").replace(/\s?$/,"").split(/\s/g).join(",")||"":"";i=[];var D=[],z=h.parentNode;if(z)for(var r=0;r<6&&z!==null;r++){(parId=z.id)&&i.push(parId);if(parClassName=z.className)D=D.concat(parClassName.split(/\s/));z=z.parentNode}z=ncbi.sg.getInstance();r=z.currentPageHitId||"";var q=[];p.length>0&&q.push(n+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
45 "_id="+encodeURIComponent(p));x.length>0&&q.push(n+"_name="+encodeURIComponent(x));F.length>0&&q.push(n+"_sid="+encodeURIComponent(F));G.length>0&&q.push(n+"_href="+encodeURIComponent(G));C.length>0&&q.push(n+"_text="+encodeURIComponent(C));I.length>0&&q.push(n+"_class="+encodeURIComponent(I));r=z.getBrowserWidthHeight();r.width!==null&&q.push("browserwidth="+encodeURIComponent(r.width));r.height!==null&&q.push("browserheight="+encodeURIComponent(r.height));for(var E in o){r=o[E];r!==undefined&&q.push(E.toLowerCase()+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
46 "="+r.toString())}q.push("jsevent="+f);H.length>0&&q.push(H);if(typeof jQuery!=="undefined")if(h=jQuery(h).attr("sg")){h=h.split(/\}\s*,\s*\{/);for(r=0;r<h.length;r++){o=h[r].match(/name\s*:\s*'(.+)',\s*selector\s*:\s*'(.+)'/);if(o.length===3){E="cust_"+o[1];o=jQuery(o[2]).val();q.push(E+"="+encodeURIComponent(o))}}}if(m&&m.length>0)for(;m.length>0;)q.push(m.shift());i.length>0&&q.push("ancestorId="+i.join(","));D.length>0&&q.push("ancestorClassName="+D.join(",").replace(/\s+/g," ").replace(/(^\s|\s$)/g,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
47 ""));z.addScrollDetailsAr(q,1800-q.join("&").length,true);if(f==="click"){f=q.join("&").replace("jsevent=click","jsevent=clicknext");r=ncbi.sg.getInstance().currentPageHitId||"";f+="&ncbi_phid="+r;z._storeNext("clicknext",f,null,l)}ncbi.sg._ping(q,true,null,null,l)}function e(f){var i={};if(f){if(f.clientX||f.clientY){var m=ncbi.sg.getInstance()._getScrollXYPx();i.evt_coor_x=f.clientX+m[0];i.evt_coor_y=f.clientY+m[1]}else if(f.pageX||f.pageY){i.evt_coor_x=f.pageX;i.evt_coor_y=f.pageY}i.jseventms=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
48 ncbi.sg.getInstance().getMillisecondsSinceSunday()}return i}function g(f,i,m,l,n){var h={},o=null,p=null;if(typeof i==="string"){o=i;p=m}else{h=e(i);o=m;p=l}if(p){i=typeof p;if(i==="string")p=[p];else if(i==="object"&&!(p instanceof Array)){i=[];for(var x in p)i.push(x+"="+p[x]);p=i}}c(o,{link:f,evt:h},p,n)}function k(f,i,m){var l=[];if(typeof i==="undefined")i=true;if(typeof f==="object"&&!(f instanceof Array))for(var n in f)l.push(n+"="+encodeURIComponent(f[n]));else if(typeof f==="string")l.push(f);
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
49 else l=f;f=ncbi.sg.getInstance().currentPageHitId||"";n=null;if(typeof ncbi.sg.loadTime!=="undefined")n=new Date-ncbi.sg.loadTime;var h=l.join("&");if(h.indexOf("jsevent=clicknext")!==-1||h.indexOf("jsevent=searchnext")!==-1||h.indexOf("jsevent=unloadnext")!==-1){f.length>0&&l.push("next_phid="+encodeURIComponent(f));n!==null&&l.push("next_ncbi_timesinceload="+n)}else{f.length>0&&l.push("ncbi_phid="+encodeURIComponent(f));n!==null&&l.push("ncbi_timesinceload="+n)}ncbi.sg.getInstance()._sendAl(l.join("&"),
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
50 null,i,m)}var j=window.onerror;window.onerror=function(f,i,m){if(!ncbi.sg.hasNotedErrorEvent){ncbi.sg.getInstance().noteEventData("jserror",{jserror:f,jserrorlocation:i,jserrorline:m,SELF_URL:window.location.href},["ncbi_sessionid","ncbi_phid"]);ncbi.sg.hasNotedErrorEvent=true;if(typeof j==="function")return j(f,i,m)}};var t=window.onbeforeunload;window.onbeforeunload=function(f){a();if(typeof t==="function")return t(f)};var y=[],A=[],B=[],w=false;ncbi.sg.sendElementEvent=function(f,i,m){c(f,i,m,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
51 false)};ncbi.sg.clickTimers=[];if(typeof ncbi.sg.isClickEnabled==="undefined"){for(var v=document.getElementsByTagName("meta"),u=v.length-1,s=true;u>=0;){if(v[u].name.toLowerCase()==="ncbi_clickdisabled"){s=v[u].content.toLowerCase()==="false";break}u--}ncbi.sg.isClickEnabled=s}setClickEvent=function(){var f=function(h){return(h=typeof h.parentNode!=="undefined"?h.parentNode:null)?m(h)?h:f(h):false},i=function(h){h=h.target||h.srcElement;if(typeof h=="undefined"||h==null)return null;if(h.nodeType==
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
52 3)h=target.parentNode;m(h)||(h=f(h));return h},m=function(h){var o=typeof h.tagName!=="undefined"?h.tagName.toLowerCase():null,p=false,x=false;if(typeof jQuery!=="undefined")p=jQuery(h).is("button, input[type=button], input[type=submit], input[type=reset]");else if(o==="input"){h=inp.type;p=h=="button"||h=="submit"||h=="reset"}else p=o==="button"?true:false;p||(x=o=="a"||o=="area");return x?"link":p?"button":null},l=function(h,o,p,x){if(!(x&&x=="click"&&h.which&&h.which==3))if(!(!o||m(o)==null)){ncbi.sg.getInstance().setCookie("ncbi_prevPHID",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
53 ncbi.sg.getInstance().currentPageHitId);h=e(h);h.iscontextmenu=x=="contextmenu"?"true":"false";o={evt:h,link:o,tstamp:(new Date).getTime(),floodTstamp:(new Date).getTime()};b(o);ncbi.sg.clickTimers&&window.clearTimeout(ncbi.sg.clickTimers);ncbi.sg.clickTimers=window.setTimeout(function(){ncbi.sg.clickTimers=null},300)}};if(window.addEventListener){window.addEventListener("click",function(h){l(h,i(h),[],"click")});window.addEventListener("contextmenu",function(h){l(h,i(h),[],"contextmenu")},false)}else if(window.attachEvent){document.attachEvent("onclick",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
54 function(h){l(h,i(h),[],"click")});document.attachEvent("oncontextmenu",function(h){l(h,i(h),[],"contextmenu")},false)}if(Event.prototype.stopPropagation){var n=Event.prototype.stopPropagation;Event.prototype.stopPropagation=function(){var h=i(this);if(m(h)!=null)if(this.type=="click")l(this,h,[],"click");else this.type=="contextmenu"&&l(this,h,[],"contextmenu");return n.apply(this,arguments)}}};setClickEvent();ncbi.sg.scanLinks=function(){};ncbi.sg._ping=function(f,i,m,l,n){if(typeof n==="undefined"||
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
55 n===null)n=true;typeof f==="undefined"||f===null||(typeof f==="object"&&f.nodeName!==undefined?g(f,i,m,l,n):k(f,i,n))};ncbi.sg.ping=function(f,i,m,l){ncbi.sg._ping(f,i,m,l,false)};ncbi.sg.loadTime=new Date})();if(!Array.prototype.indexOf)Array.prototype.indexOf=function(a,b){var d=this.length>>>0;b=Number(b)||0;b=b<0?Math.ceil(b):Math.floor(b);if(b<0)b+=d;for(;b<d;b++)if(b in this&&this[b]===a)return b;return-1};(function(){function a(){ncbi_onloadTime=new Date}ncbi_onloadTime=null;if(typeof jQuery!==
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
56 "undefined")jQuery(window).load(a);else{var b=window.onload;window.onload=function(d){b&&b(d);a()}}})()}})();
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
57 (function(){ncbi.sg._ajaxRequestIndex=1;if(typeof XMLHttpRequest!=="undefined"){var a,b=function(c,e,g,k){if(typeof a==="undefined"||!a)a=ncbi.sg.getInstance();e=(e=a.getVal(e))?e:"unknown";if(typeof k!=="undefined"&&k)e+=".0"+ncbi.sg._ajaxRequestIndex;c.setRequestHeader(g,e)},d=XMLHttpRequest.prototype.open;XMLHttpRequest.prototype.open=function(){var c=d.apply(this,arguments);if(!(typeof this._ncbi_skipOverride!=="undefined"&&this._ncbi_skipOverride)){b(this,"ncbi_phid","NCBI-PHID",true);b(this,
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
58 "ncbi_sessionid","NCBI-SESSIONID",false);ncbi.sg._ajaxRequestIndex+=1}return c}}})();
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
59 typeof jQuery!=="undefined"&&jQuery(function(){if(ncbi.sg.isHoverEnabled){var a=function(c,e,g){var k=[];if(typeof e==="undefined")e=true;if(typeof c==="object"&&!(c instanceof Array))for(var j in c)k.push(j+"="+encodeURIComponent(c[j]));else if(typeof c==="string")k.push(c);else k=c;c=ncbi.sg.getInstance().currentPageHitId||"";j=null;if(typeof ncbi.sg.loadTime!=="undefined")j=new Date-ncbi.sg.loadTime;k.join("&");c.length>0&&k.push("next_phid="+encodeURIComponent(c));j!==null&&k.push("next_ncbi_timesinceload="+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
60 j);ncbi.sg.getInstance()._sendAl(k.join("&"),null,e,g)},b=ncbi.sg.getInstance().getCookie("hovernext");if(b){a(b);ncbi.sg.getInstance().setCookie("hovernext","")}var d=function(c){var e={};if(c){if(c.clientX||c.clientY){var g=ncbi.sg.getInstance()._getScrollXYPx();e.evt_coor_x=c.clientX+g[0];e.evt_coor_y=c.clientY+g[1]}else if(c.pageX||c.pageY){e.evt_coor_x=c.pageX;e.evt_coor_y=c.pageY}e.jseventms=ncbi.sg.getInstance().getMillisecondsSinceSunday()}return e};jQuery(document).on("mousedown","a[ref*='itool=Abstract-nondef'], #disc_col a",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
61 function(c){c=c.originalEvent;var e=d(c);jQuery(c.target);(new Date).getTime();(new Date).getTime();var g=jQuery(c.target),k=g.id||"",j=g.name||"",t=g.sid||"",y=g.href||"",A=g.innerText||g.textContent||"";if(A.length>50)A=A.substr(0,50);var B=g.getAttribute?g.getAttribute("ref")||g.ref||"":"",w=g.className?g.className.replace(/^\s?/,"").replace(/\s?$/,"").split(/\s/g).join(",")||"":"";c=[];var v=[],u=g.parentNode;if(u)for(var s=0;s<6&&u!==null;s++){(parId=u.id)&&c.push(parId);if(parClassName=u.className)v=
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
62 v.concat(parClassName.split(/\s/));u=u.parentNode}u=ncbi.sg.getInstance();var f=u.currentPageHitId||"";f=[];k.length>0&&f.push("link_id="+encodeURIComponent(k));j.length>0&&f.push("link_name="+encodeURIComponent(j));t.length>0&&f.push("link_sid="+encodeURIComponent(t));y.length>0&&f.push("link_href="+encodeURIComponent(y));A.length>0&&f.push("link_text="+encodeURIComponent(A));w.length>0&&f.push("link_class="+encodeURIComponent(w));s=u.getBrowserWidthHeight();s.width!==null&&f.push("browserwidth="+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
63 encodeURIComponent(s.width));s.height!==null&&f.push("browserheight="+encodeURIComponent(s.height));for(var i in e){s=e[i];s!==undefined&&f.push(i.toLowerCase()+"="+s.toString())}f.push("jsevent=hovernext");B.length>0&&f.push(B);if(typeof jQuery!=="undefined")if(e=jQuery(g).attr("sg")){e=e.split(/\}\s*,\s*\{/);for(s=0;s<e.length;s++){g=e[s].match(/name\s*:\s*'(.+)',\s*selector\s*:\s*'(.+)'/);if(g.length===3){i="cust_"+g[1];g=jQuery(g[2]).val();f.push(i+"="+encodeURIComponent(g))}}}c.length>0&&f.push("ancestorId="+
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
64 c.join(","));v.length>0&&f.push("ancestorClassName="+v.join(",").replace(/\s+/g," ").replace(/(^\s|\s$)/g,""));u.addScrollDetailsAr(f,1800-f.join("&").length,true);c=f.join("&");f=ncbi.sg.getInstance().currentPageHitId||"";c+="&ncbi_phid="+f;ncbi.sg.getInstance()._storeNext("hovernext",c,null)});jQuery(document).on("mouseup mousedown",function(c){!jQuery(c.target).is("a[ref*='itool=Abstract-nondef']")&&jQuery(c.target).parents("a[ref*='itool=Abstract-nondef']").length==0&&!jQuery(c.target).is("#disc_col a")&&
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
65 jQuery(c.target).parents("#disc_col a").length==0&&ncbi.sg.getInstance().setCookie("hovernext","")})}});
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
66
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
67 ;
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
68 // This code creates window.console if it doesn't exist.
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
69 // It also creates stub functions for those functions that are missing in window.console.
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
70 // (Safari implements some but not all of the firebug window.console methods--this implements the rest.)
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
71 (function() {
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
72 var names = [ "log", "debug", "info", "warn", "error", "assert", "dir", "dirxml", "group",
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
73 "groupEnd", "time", "timeEnd", "count", "trace", "profile", "profileEnd" ];
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
74
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
75 if (typeof(console) === 'undefined' || typeof console === "function" ) {
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
76 //"typeof function" is needed see PP-769
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
77 console = {};
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
78 }
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
79
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
80 for (var i = 0; i < names.length; ++i) {
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
81 if (typeof(console[names[i]]) === 'undefined') {
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
82 console[names[i]] = function() { return false; };
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
83 }
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
84 }
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
85 ncbi.sg.getInstance().init();
bad241dc701f add example input blast xml and output html page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
86 })();