Mercurial > repos > jankanis > blast2html
annotate Blast output page example trimmed.html @ 10:2fbdf2eb27b4
All data is displayed now, still some formatting to do
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Fri, 09 May 2014 18:16:48 +0200 |
| parents | 34211f5b83fd |
| children |
| rev | line source |
|---|---|
| 1 | 1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> |
| 2 <html xmlns="http://www.w3.org/1999/xhtml"><head> | |
| 3 | |
| 4 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8"> | |
| 5 <meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1"> | |
| 6 <meta name="jig" content="ncbitoggler ncbiautocomplete ncbilocalnav ncbigrid ncbipopper"> | |
| 7 <meta name="ncbitoggler" content="animation:'none'"> | |
| 8 <meta name="ncbipopper" content="animation:'none',closeEvent: 'click',openEvent: 'click',destPosition: 'top right',triggerPosition: 'bottom right'"> | |
| 9 | |
| 10 <meta name="ncbi_app" content="blast"> | |
| 11 <meta name="ncbi_pdid" content="blastresults"> | |
| 12 <meta name="ncbi_stat" content="false"> | |
| 13 <meta name="ncbi_sessionid" content="8A8E11EE2CABF371_0000SID"> | |
| 14 <meta name="ncbi_phid" content="5AAB74D7368F2C81000000000000C9C8"> | |
| 15 <script type="text/javascript"> var ncbi_startTime = new Date(); </script> | |
| 16 <title>NCBI Blast:Nucleotide Sequence (16 letters)</title> | |
| 2 | 17 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jig.js"></script><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig_002.themenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbitogglernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbitogglernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbiautocompletenull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbiautocompletenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibasicmenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibasicmenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbimenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbimenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbilocalnavnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbilocalnavnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.buttonnull"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibuttonnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbibuttonnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_004.ncbipoppernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbipoppernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbigridnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbigridnull"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.themenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbitogglernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbitogglernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbiautocompletenull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbiautocompletenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbibasicmenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbibasicmenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbimenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbimenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbilocalnavnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbilocalnavnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.buttonnull"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibuttonnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbibuttonnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbipoppernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbipoppernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbigridnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbigridnull"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_005.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_004.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_004.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_007.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_007.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_008.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_008.js"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_005.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_009.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_006.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_006.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.css"> |
| 1 | 18 <script type="text/javascript"> jQuery.getScript("/core/alerts/alerts.js", function() { |
| 19 galert(['div#header', 'body > *:nth-child(1)']) | |
| 20 });</script> | |
| 21 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/main.css" media="screen"> | |
| 22 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/blastRes.css" media="screen"> | |
| 23 <!--[if IE]> | |
| 24 <link rel="stylesheet" type="text/css" href="css/descriptionsIE.css" media="screen" /> | |
| 25 <![endif]--> | |
| 26 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/print.css" media="print"> | |
| 27 <!--[if lte IE 6]> | |
| 28 <link rel="stylesheet" type="text/css" href="css/ie6_or_less.css" /> | |
| 29 <![endif]--> | |
| 30 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/blastReq.css" media="screen"> | |
| 31 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/results.css" media="screen"> | |
| 32 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/dynFormatRes.css" media="screen"> | |
| 33 | |
| 34 <style media="print" type="text/css">.print-log { position:absolute;left:-10000px;top:auto;width:1px;height:1px;overflow:hidden; }.print-log li { list-style-image: url('/stat?jsevent=print&ncbi_app=blast&ncbi_pdid=blastresults&ncbi_phid=5AAB74D7368F2C81000000000000C9C8'); }</style><style type="text/css">.print-log { position:absolute;left:-10000px;top:auto;width:1px;height:1px;overflow:hidden; }</style><style type="text/css" charset="utf-8">/* See license.txt for terms of usage */ | |
| 35 /** reset styling **/ | |
| 36 .firebugResetStyles { | |
| 37 z-index: 2147483646 !important; | |
| 38 top: 0 !important; | |
| 39 left: 0 !important; | |
| 40 display: block !important; | |
| 41 border: 0 none !important; | |
| 42 margin: 0 !important; | |
| 43 padding: 0 !important; | |
| 44 outline: 0 !important; | |
| 45 min-width: 0 !important; | |
| 46 max-width: none !important; | |
| 47 min-height: 0 !important; | |
| 48 max-height: none !important; | |
| 49 position: fixed !important; | |
| 50 transform: rotate(0deg) !important; | |
| 51 transform-origin: 50% 50% !important; | |
| 52 border-radius: 0 !important; | |
| 53 box-shadow: none !important; | |
| 54 background: transparent none !important; | |
| 55 pointer-events: none !important; | |
| 56 white-space: normal !important; | |
| 57 } | |
| 58 | |
| 59 .firebugBlockBackgroundColor { | |
| 60 background-color: transparent !important; | |
| 61 } | |
| 62 | |
| 63 .firebugResetStyles:before, .firebugResetStyles:after { | |
| 64 content: "" !important; | |
| 65 } | |
| 66 /**actual styling to be modified by firebug theme**/ | |
| 67 .firebugCanvas { | |
| 68 display: none !important; | |
| 69 } | |
| 70 | |
| 71 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 72 .firebugLayoutBox { | |
| 73 width: auto !important; | |
| 74 position: static !important; | |
| 75 } | |
| 76 | |
| 77 .firebugLayoutBoxOffset { | |
| 78 opacity: 0.8 !important; | |
| 79 position: fixed !important; | |
| 80 } | |
| 81 | |
| 82 .firebugLayoutLine { | |
| 83 opacity: 0.4 !important; | |
| 84 background-color: #000000 !important; | |
| 85 } | |
| 86 | |
| 87 .firebugLayoutLineLeft, .firebugLayoutLineRight { | |
| 88 width: 1px !important; | |
| 89 height: 100% !important; | |
| 90 } | |
| 91 | |
| 92 .firebugLayoutLineTop, .firebugLayoutLineBottom { | |
| 93 width: 100% !important; | |
| 94 height: 1px !important; | |
| 95 } | |
| 96 | |
| 97 .firebugLayoutLineTop { | |
| 98 margin-top: -1px !important; | |
| 99 border-top: 1px solid #999999 !important; | |
| 100 } | |
| 101 | |
| 102 .firebugLayoutLineRight { | |
| 103 border-right: 1px solid #999999 !important; | |
| 104 } | |
| 105 | |
| 106 .firebugLayoutLineBottom { | |
| 107 border-bottom: 1px solid #999999 !important; | |
| 108 } | |
| 109 | |
| 110 .firebugLayoutLineLeft { | |
| 111 margin-left: -1px !important; | |
| 112 border-left: 1px solid #999999 !important; | |
| 113 } | |
| 114 | |
| 115 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 116 .firebugLayoutBoxParent { | |
| 117 border-top: 0 none !important; | |
| 118 border-right: 1px dashed #E00 !important; | |
| 119 border-bottom: 1px dashed #E00 !important; | |
| 120 border-left: 0 none !important; | |
| 121 position: fixed !important; | |
| 122 width: auto !important; | |
| 123 } | |
| 124 | |
| 125 .firebugRuler{ | |
| 126 position: absolute !important; | |
| 127 } | |
| 128 | |
| 129 .firebugRulerH { | |
| 130 top: -15px !important; | |
| 131 left: 0 !important; | |
| 132 width: 100% !important; | |
| 133 height: 14px !important; | |
| 134 background: url("data:image/png,%89PNG%0D%0A%1A%0A%00%00%00%0DIHDR%00%00%13%88%00%00%00%0E%08%02%00%00%00L%25a%0A%00%00%00%04gAMA%00%00%D6%D8%D4OX2%00%00%00%19tEXtSoftware%00Adobe%20ImageReadyq%C9e%3C%00%00%04%F8IDATx%DA%EC%DD%D1n%E2%3A%00E%D1%80%F8%FF%EF%E2%AF2%95%D0D4%0E%C1%14%B0%8Fa-%E9%3E%CC%9C%87n%B9%81%A6W0%1C%A6i%9A%E7y%0As8%1CT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AATE9%FE%FCw%3E%9F%AF%2B%2F%BA%97%FDT%1D~K(%5C%9D%D5%EA%1B%5C%86%B5%A9%BDU%B5y%80%ED%AB*%03%FAV9%AB%E1%CEj%E7%82%EF%FB%18%BC%AEJ8%AB%FA'%D2%BEU9%D7U%ECc0%E1%A2r%5DynwVi%CFW%7F%BB%17%7Dy%EACU%CD%0E%F0%FA%3BX%FEbV%FEM%9B%2B%AD%BE%AA%E5%95v%AB%AA%E3E5%DCu%15rV9%07%B5%7F%B5w%FCm%BA%BE%AA%FBY%3D%14%F0%EE%C7%60%0EU%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5JU%88%D3%F5%1F%AE%DF%3B%1B%F2%3E%DAUCNa%F92%D02%AC%7Dm%F9%3A%D4%F2%8B6%AE*%BF%5C%C2Ym~9g5%D0Y%95%17%7C%C8c%B0%7C%18%26%9CU%CD%13i%F7%AA%90%B3Z%7D%95%B4%C7%60%E6E%B5%BC%05%B4%FBY%95U%9E%DB%FD%1C%FC%E0%9F%83%7F%BE%17%7DkjMU%E3%03%AC%7CWj%DF%83%9An%BCG%AE%F1%95%96yQ%0Dq%5Dy%00%3Et%B5'%FC6%5DS%95pV%95%01%81%FF'%07%00%00%00%00%00%00%00%00%00%F8x%C7%F0%BE%9COp%5D%C9%7C%AD%E7%E6%EBV%FB%1E%E0(%07%E5%AC%C6%3A%ABi%9C%8F%C6%0E9%AB%C0'%D2%8E%9F%F99%D0E%B5%99%14%F5%0D%CD%7F%24%C6%DEH%B8%E9rV%DFs%DB%D0%F7%00k%FE%1D%84%84%83J%B8%E3%BA%FB%EF%20%84%1C%D7%AD%B0%8E%D7U%C8Y%05%1E%D4t%EF%AD%95Q%BF8w%BF%E9%0A%BF%EB%03%00%00%00%00%00%00%00%00%00%B8vJ%8E%BB%F5%B1u%8Cx%80%E1o%5E%CA9%AB%CB%CB%8E%03%DF%1D%B7T%25%9C%D5(%EFJM8%AB%CC'%D2%B2*%A4s%E7c6%FB%3E%FA%A2%1E%80~%0E%3E%DA%10x%5D%95Uig%15u%15%ED%7C%14%B6%87%A1%3B%FCo8%A8%D8o%D3%ADO%01%EDx%83%1A~%1B%9FpP%A3%DC%C6'%9C%95gK%00%00%00%00%00%00%00%00%00%20%D9%C9%11%D0%C0%40%AF%3F%EE%EE%92%94%D6%16X%B5%BCMH%15%2F%BF%D4%A7%C87%F1%8E%F2%81%AE%AAvzr%DA2%ABV%17%7C%E63%83%E7I%DC%C6%0Bs%1B%EF6%1E%00%00%00%00%00%00%00%00%00%80cr%9CW%FF%7F%C6%01%0E%F1%CE%A5%84%B3%CA%BC%E0%CB%AA%84%CE%F9%BF)%EC%13%08WU%AE%AB%B1%AE%2BO%EC%8E%CBYe%FE%8CN%ABr%5Dy%60~%CFA%0D%F4%AE%D4%BE%C75%CA%EDVB%EA(%B7%F1%09g%E5%D9%12%00%00%00%00%00%00%00%00%00H%F6%EB%13S%E7y%5E%5E%FB%98%F0%22%D1%B2'%A7%F0%92%B1%BC%24z3%AC%7Dm%60%D5%92%B4%7CEUO%5E%F0%AA*%3BU%B9%AE%3E%A0j%94%07%A0%C7%A0%AB%FD%B5%3F%A0%F7%03T%3Dy%D7%F7%D6%D4%C0%AAU%D2%E6%DFt%3F%A8%CC%AA%F2%86%B9%D7%F5%1F%18%E6%01%F8%CC%D5%9E%F0%F3z%88%AA%90%EF%20%00%00%00%00%00%00%00%00%00%C0%A6%D3%EA%CFi%AFb%2C%7BB%0A%2B%C3%1A%D7%06V%D5%07%A8r%5D%3D%D9%A6%CAu%F5%25%CF%A2%99%97zNX%60%95%AB%5DUZ%D5%FBR%03%AB%1C%D4k%9F%3F%BB%5C%FF%81a%AE%AB'%7F%F3%EA%FE%F3z%94%AA%D8%DF%5B%01%00%00%00%00%00%00%00%00%00%8E%FB%F3%F2%B1%1B%8DWU%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*UiU%C7%BBe%E7%F3%B9%CB%AAJ%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5*%AAj%FD%C6%D4%5Eo%90%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5%86%AF%1B%9F%98%DA%EBm%BBV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%AD%D6%E4%F58%01%00%00%00%00%00%00%00%00%00%00%00%00%00%40%85%7F%02%0C%008%C2%D0H%16j%8FX%00%00%00%00IEND%AEB%60%82") repeat-x !important; | |
| 135 border-top: 1px solid #BBBBBB !important; | |
| 136 border-right: 1px dashed #BBBBBB !important; | |
| 137 border-bottom: 1px solid #000000 !important; | |
| 138 } | |
| 139 | |
| 140 .firebugRulerV { | |
| 141 top: 0 !important; | |
| 142 left: -15px !important; | |
| 143 width: 14px !important; | |
| 144 height: 100% !important; | |
| 145 background: url("data:image/png,%89PNG%0D%0A%1A%0A%00%00%00%0DIHDR%00%00%00%0E%00%00%13%88%08%02%00%00%00%0E%F5%CB%10%00%00%00%04gAMA%00%00%D6%D8%D4OX2%00%00%00%19tEXtSoftware%00Adobe%20ImageReadyq%C9e%3C%00%00%06~IDATx%DA%EC%DD%D1v%A20%14%40Qt%F1%FF%FF%E4%97%D9%07%3BT%19%92%DC%40(%90%EEy%9A5%CB%B6%E8%F6%9Ac%A4%CC0%84%FF%DC%9E%CF%E7%E3%F1%88%DE4%F8%5D%C7%9F%2F%BA%DD%5E%7FI%7D%F18%DDn%BA%C5%FB%DF%97%BFk%F2%10%FF%FD%B4%F2M%A7%FB%FD%FD%B3%22%07p%8F%3F%AE%E3%F4S%8A%8F%40%EEq%9D%BE8D%F0%0EY%A1Uq%B7%EA%1F%81%88V%E8X%3F%B4%CEy%B7h%D1%A2E%EBohU%FC%D9%AF2fO%8BBeD%BE%F7X%0C%97%A4%D6b7%2Ck%A5%12%E3%9B%60v%B7r%C7%1AI%8C%BD%2B%23r%00c0%B2v%9B%AD%CA%26%0C%1Ek%05A%FD%93%D0%2B%A1u%8B%16-%95q%5Ce%DCSO%8E%E4M%23%8B%F7%C2%FE%40%BB%BD%8C%FC%8A%B5V%EBu%40%F9%3B%A72%FA%AE%8C%D4%01%CC%B5%DA%13%9CB%AB%E2I%18%24%B0n%A9%0CZ*Ce%9C%A22%8E%D8NJ%1E%EB%FF%8F%AE%CAP%19*%C3%BAEKe%AC%D1%AAX%8C*%DEH%8F%C5W%A1e%AD%D4%B7%5C%5B%19%C5%DB%0D%EF%9F%19%1D%7B%5E%86%BD%0C%95%A12%AC%5B*%83%96%CAP%19%F62T%86%CAP%19*%83%96%CA%B8Xe%BC%FE)T%19%A1%17xg%7F%DA%CBP%19*%C3%BA%A52T%86%CAP%19%F62T%86%CA%B0n%A9%0CZ%1DV%C6%3D%F3%FCH%DE%B4%B8~%7F%5CZc%F1%D6%1F%AF%84%F9%0F6%E6%EBVt9%0E~%BEr%AF%23%B0%97%A12T%86%CAP%19%B4T%86%CA%B8Re%D8%CBP%19*%C3%BA%A52huX%19%AE%CA%E5%BC%0C%7B%19*CeX%B7h%A9%0C%95%E1%BC%0C%7B%19*CeX%B7T%06%AD%CB%5E%95%2B%BF.%8F%C5%97%D5%E4%7B%EE%82%D6%FB%CF-%9C%FD%B9%CF%3By%7B%19%F62T%86%CA%B0n%D1R%19*%A3%D3%CA%B0%97%A12T%86uKe%D0%EA%B02*%3F1%99%5DB%2B%A4%B5%F8%3A%7C%BA%2B%8Co%7D%5C%EDe%A8%0C%95a%DDR%19%B4T%C66%82fA%B2%ED%DA%9FC%FC%17GZ%06%C9%E1%B3%E5%2C%1A%9FoiB%EB%96%CA%A0%D5qe4%7B%7D%FD%85%F7%5B%ED_%E0s%07%F0k%951%ECr%0D%B5C%D7-g%D1%A8%0C%EB%96%CA%A0%A52T%C6)*%C3%5E%86%CAP%19%D6-%95A%EB*%95q%F8%BB%E3%F9%AB%F6%E21%ACZ%B7%22%B7%9B%3F%02%85%CB%A2%5B%B7%BA%5E%B7%9C%97%E1%BC%0C%EB%16-%95%A12z%AC%0C%BFc%A22T%86uKe%D0%EA%B02V%DD%AD%8A%2B%8CWhe%5E%AF%CF%F5%3B%26%CE%CBh%5C%19%CE%CB%B0%F3%A4%095%A1%CAP%19*Ce%A8%0C%3BO*Ce%A8%0C%95%A12%3A%AD%8C%0A%82%7B%F0v%1F%2FD%A9%5B%9F%EE%EA%26%AF%03%CA%DF9%7B%19*Ce%A8%0C%95%A12T%86%CA%B8Ze%D8%CBP%19*Ce%A8%0C%95%D1ae%EC%F7%89I%E1%B4%D7M%D7P%8BjU%5C%BB%3E%F2%20%D8%CBP%19*Ce%A8%0C%95%A12T%C6%D5*%C3%5E%86%CAP%19*Ce%B4O%07%7B%F0W%7Bw%1C%7C%1A%8C%B3%3B%D1%EE%AA%5C%D6-%EBV%83%80%5E%D0%CA%10%5CU%2BD%E07YU%86%CAP%19*%E3%9A%95%91%D9%A0%C8%AD%5B%EDv%9E%82%FFKOee%E4%8FUe%A8%0C%95%A12T%C6%1F%A9%8C%C8%3D%5B%A5%15%FD%14%22r%E7B%9F%17l%F8%BF%ED%EAf%2B%7F%CF%ECe%D8%CBP%19*Ce%A8%0C%95%E1%93~%7B%19%F62T%86%CAP%19*Ce%A8%0C%E7%13%DA%CBP%19*Ce%A8%0CZf%8B%16-Z%B4h%D1R%19f%8B%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1%A2%A52%CC%16-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2EKe%98-Z%B4h%D1%A2EKe%D02%5B%B4h%D1%A2EKe%D02%5B%B4h%D1%A2E%8B%96%CA0%5B%B4h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%16-%95a%B6h%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-Z*%C3l%D1%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z%B4T%86%D9%A2E%8B%16-Z%B4T%06-%B3E%8B%16-Z%B4T%06-%B3E%8B%16-Z%B4h%A9%0C%B3E%8B%16-Z%B4h%A9%0CZf%8B%16-Z%B4h%A9%0CZf%8B%16-Z%B4h%D1R%19f%8B%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1%A2%A52%CC%16-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2EKe%98-Z%B4h%D1%A2EKe%D02%5B%B4h%D1%A2EKe%D02%5B%B4h%D1%A2E%8B%96%CA0%5B%B4h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%16-%95a%B6h%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-Z*%C3l%D1%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z%B4T%86%D9%A2E%8B%16-Z%B4T%06-%B3E%8B%16-Z%B4T%06-%B3E%8B%16-Z%B4h%A9%0C%B3E%8B%16-Z%B4h%A9%0CZf%8B%16-Z%B4h%A9%0CZf%8B%16-Z%B4h%D1R%19f%8B%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1R%19%B4%CC%16-Z%B4h%D1%A2%A52%CC%16-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2%A52h%99-Z%B4h%D1%A2EKe%98-Z%B4h%D1%A2EKe%D02%5B%B4h%D1%A2EKe%D02%5B%B4h%D1%A2E%8B%96%CA0%5B%B4h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%96%CA%A0e%B6h%D1%A2E%8B%16-%95a%B6h%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-%95A%CBl%D1%A2E%8B%16-Z*%C3l%D1%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z*%83%96%D9%A2E%8B%16-Z%B4T%86%D9%A2E%8B%16-Z%B4T%06-%B3E%8B%16-Z%B4%AE%A4%F5%25%C0%00%DE%BF%5C'%0F%DA%B8q%00%00%00%00IEND%AEB%60%82") repeat-y !important; | |
| 146 border-left: 1px solid #BBBBBB !important; | |
| 147 border-right: 1px solid #000000 !important; | |
| 148 border-bottom: 1px dashed #BBBBBB !important; | |
| 149 } | |
| 150 | |
| 151 .overflowRulerX > .firebugRulerV { | |
| 152 left: 0 !important; | |
| 153 } | |
| 154 | |
| 155 .overflowRulerY > .firebugRulerH { | |
| 156 top: 0 !important; | |
| 157 } | |
| 158 | |
| 159 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 160 .fbProxyElement { | |
| 161 position: fixed !important; | |
| 162 pointer-events: auto !important; | |
| 163 } | |
| 2 | 164 </style><style type="text/css" charset="utf-8">/* See license.txt for terms of usage */ |
| 165 /** reset styling **/ | |
| 166 .firebugResetStyles { | |
| 167 z-index: 2147483646 !important; | |
| 168 top: 0 !important; | |
| 169 left: 0 !important; | |
| 170 display: block !important; | |
| 171 border: 0 none !important; | |
| 172 margin: 0 !important; | |
| 173 padding: 0 !important; | |
| 174 outline: 0 !important; | |
| 175 min-width: 0 !important; | |
| 176 max-width: none !important; | |
| 177 min-height: 0 !important; | |
| 178 max-height: none !important; | |
| 179 position: fixed !important; | |
| 180 transform: rotate(0deg) !important; | |
| 181 transform-origin: 50% 50% !important; | |
| 182 border-radius: 0 !important; | |
| 183 box-shadow: none !important; | |
| 184 background: transparent none !important; | |
| 185 pointer-events: none !important; | |
| 186 white-space: normal !important; | |
| 187 } | |
| 188 | |
| 189 .firebugBlockBackgroundColor { | |
| 190 background-color: transparent !important; | |
| 191 } | |
| 192 | |
| 193 .firebugResetStyles:before, .firebugResetStyles:after { | |
| 194 content: "" !important; | |
| 195 } | |
| 196 /**actual styling to be modified by firebug theme**/ | |
| 197 .firebugCanvas { | |
| 198 display: none !important; | |
| 199 } | |
| 200 | |
| 201 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 202 .firebugLayoutBox { | |
| 203 width: auto !important; | |
| 204 position: static !important; | |
| 205 } | |
| 206 | |
| 207 .firebugLayoutBoxOffset { | |
| 208 opacity: 0.8 !important; | |
| 209 position: fixed !important; | |
| 210 } | |
| 211 | |
| 212 .firebugLayoutLine { | |
| 213 opacity: 0.4 !important; | |
| 214 background-color: #000000 !important; | |
| 215 } | |
| 216 | |
| 217 .firebugLayoutLineLeft, .firebugLayoutLineRight { | |
| 218 width: 1px !important; | |
| 219 height: 100% !important; | |
| 220 } | |
| 221 | |
| 222 .firebugLayoutLineTop, .firebugLayoutLineBottom { | |
| 223 width: 100% !important; | |
| 224 height: 1px !important; | |
| 225 } | |
| 226 | |
| 227 .firebugLayoutLineTop { | |
| 228 margin-top: -1px !important; | |
| 229 border-top: 1px solid #999999 !important; | |
| 230 } | |
| 231 | |
| 232 .firebugLayoutLineRight { | |
| 233 border-right: 1px solid #999999 !important; | |
| 234 } | |
| 235 | |
| 236 .firebugLayoutLineBottom { | |
| 237 border-bottom: 1px solid #999999 !important; | |
| 238 } | |
| 239 | |
| 240 .firebugLayoutLineLeft { | |
| 241 margin-left: -1px !important; | |
| 242 border-left: 1px solid #999999 !important; | |
| 243 } | |
| 244 | |
| 245 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 246 .firebugLayoutBoxParent { | |
| 247 border-top: 0 none !important; | |
| 248 border-right: 1px dashed #E00 !important; | |
| 249 border-bottom: 1px dashed #E00 !important; | |
| 250 border-left: 0 none !important; | |
| 251 position: fixed !important; | |
| 252 width: auto !important; | |
| 253 } | |
| 254 | |
| 255 .firebugRuler{ | |
| 256 position: absolute !important; | |
| 257 } | |
| 258 | |
| 259 .firebugRulerH { | |
| 260 top: -15px !important; | |
| 261 left: 0 !important; | |
| 262 width: 100% !important; | |
| 263 height: 14px !important; | |
| 264 background: url("data:image/png,%89PNG%0D%0A%1A%0A%00%00%00%0DIHDR%00%00%13%88%00%00%00%0E%08%02%00%00%00L%25a%0A%00%00%00%04gAMA%00%00%D6%D8%D4OX2%00%00%00%19tEXtSoftware%00Adobe%20ImageReadyq%C9e%3C%00%00%04%F8IDATx%DA%EC%DD%D1n%E2%3A%00E%D1%80%F8%FF%EF%E2%AF2%95%D0D4%0E%C1%14%B0%8Fa-%E9%3E%CC%9C%87n%B9%81%A6W0%1C%A6i%9A%E7y%0As8%1CT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AATE9%FE%FCw%3E%9F%AF%2B%2F%BA%97%FDT%1D~K(%5C%9D%D5%EA%1B%5C%86%B5%A9%BDU%B5y%80%ED%AB*%03%FAV9%AB%E1%CEj%E7%82%EF%FB%18%BC%AEJ8%AB%FA'%D2%BEU9%D7U%ECc0%E1%A2r%5DynwVi%CFW%7F%BB%17%7Dy%EACU%CD%0E%F0%FA%3BX%FEbV%FEM%9B%2B%AD%BE%AA%E5%95v%AB%AA%E3E5%DCu%15rV9%07%B5%7F%B5w%FCm%BA%BE%AA%FBY%3D%14%F0%EE%C7%60%0EU%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5JU%88%D3%F5%1F%AE%DF%3B%1B%F2%3E%DAUCNa%F92%D02%AC%7Dm%F9%3A%D4%F2%8B6%AE*%BF%5C%C2Ym~9g5%D0Y%95%17%7C%C8c%B0%7C%18%26%9CU%CD%13i%F7%AA%90%B3Z%7D%95%B4%C7%60%E6E%B5%BC%05%B4%FBY%95U%9E%DB%FD%1C%FC%E0%9F%83%7F%BE%17%7DkjMU%E3%03%AC%7CWj%DF%83%9An%BCG%AE%F1%95%96yQ%0Dq%5Dy%00%3Et%B5'%FC6%5DS%95pV%95%01%81%FF'%07%00%00%00%00%00%00%00%00%00%F8x%C7%F0%BE%9COp%5D%C9%7C%AD%E7%E6%EBV%FB%1E%E0(%07%E5%AC%C6%3A%ABi%9C%8F%C6%0E9%AB%C0'%D2%8E%9F%F99%D0E%B5%99%14%F5%0D%CD%7F%24%C6%DEH%B8%E9rV%DFs%DB%D0%F7%00k%FE%1D%84%84%83J%B8%E3%BA%FB%EF%20%84%1C%D7%AD%B0%8E%D7U%C8Y%05%1E%D4t%EF%AD%95Q%BF8w%BF%E9%0A%BF%EB%03%00%00%00%00%00%00%00%00%00%B8vJ%8E%BB%F5%B1u%8Cx%80%E1o%5E%CA9%AB%CB%CB%8E%03%DF%1D%B7T%25%9C%D5(%EFJM8%AB%CC'%D2%B2*%A4s%E7c6%FB%3E%FA%A2%1E%80~%0E%3E%DA%10x%5D%95Uig%15u%15%ED%7C%14%B6%87%A1%3B%FCo8%A8%D8o%D3%ADO%01%EDx%83%1A~%1B%9FpP%A3%DC%C6'%9C%95gK%00%00%00%00%00%00%00%00%00%20%D9%C9%11%D0%C0%40%AF%3F%EE%EE%92%94%D6%16X%B5%BCMH%15%2F%BF%D4%A7%C87%F1%8E%F2%81%AE%AAvzr%DA2%ABV%17%7C%E63%83%E7I%DC%C6%0Bs%1B%EF6%1E%00%00%00%00%00%00%00%00%00%80cr%9CW%FF%7F%C6%01%0E%F1%CE%A5%84%B3%CA%BC%E0%CB%AA%84%CE%F9%BF)%EC%13%08WU%AE%AB%B1%AE%2BO%EC%8E%CBYe%FE%8CN%ABr%5Dy%60~%CFA%0D%F4%AE%D4%BE%C75%CA%EDVB%EA(%B7%F1%09g%E5%D9%12%00%00%00%00%00%00%00%00%00H%F6%EB%13S%E7y%5E%5E%FB%98%F0%22%D1%B2'%A7%F0%92%B1%BC%24z3%AC%7Dm%60%D5%92%B4%7CEUO%5E%F0%AA*%3BU%B9%AE%3E%A0j%94%07%A0%C7%A0%AB%FD%B5%3F%A0%F7%03T%3Dy%D7%F7%D6%D4%C0%AAU%D2%E6%DFt%3F%A8%CC%AA%F2%86%B9%D7%F5%1F%18%E6%01%F8%CC%D5%9E%F0%F3z%88%AA%90%EF%20%00%00%00%00%00%00%00%00%00%C0%A6%D3%EA%CFi%AFb%2C%7BB%0A%2B%C3%1A%D7%06V%D5%07%A8r%5D%3D%D9%A6%CAu%F5%25%CF%A2%99%97zNX%60%95%AB%5DUZ%D5%FBR%03%AB%1C%D4k%9F%3F%BB%5C%FF%81a%AE%AB'%7F%F3%EA%FE%F3z%94%AA%D8%DF%5B%01%00%00%00%00%00%00%00%00%00%8E%FB%F3%F2%B1%1B%8DWU%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*UiU%C7%BBe%E7%F3%B9%CB%AAJ%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5J%95*U%AAT%A9R%A5*%AAj%FD%C6%D4%5Eo%90%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5%86%AF%1B%9F%98%DA%EBm%BBV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%ADV%AB%D5j%B5Z%AD%D6%E4%F58%01%00%00%00%00%00%00%00%00%00%00%00%00%00%40%85%7F%02%0C%008%C2%D0H%16j%8FX%00%00%00%00IEND%AEB%60%82") repeat-x !important; | |
| 265 border-top: 1px solid #BBBBBB !important; | |
| 266 border-right: 1px dashed #BBBBBB !important; | |
| 267 border-bottom: 1px solid #000000 !important; | |
| 268 } | |
| 269 | |
| 270 .firebugRulerV { | |
| 271 top: 0 !important; | |
| 272 left: -15px !important; | |
| 273 width: 14px !important; | |
| 274 height: 100% !important; | |
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| 276 border-left: 1px solid #BBBBBB !important; | |
| 277 border-right: 1px solid #000000 !important; | |
| 278 border-bottom: 1px dashed #BBBBBB !important; | |
| 279 } | |
| 280 | |
| 281 .overflowRulerX > .firebugRulerV { | |
| 282 left: 0 !important; | |
| 283 } | |
| 284 | |
| 285 .overflowRulerY > .firebugRulerH { | |
| 286 top: 0 !important; | |
| 287 } | |
| 288 | |
| 289 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
| 290 .fbProxyElement { | |
| 291 position: fixed !important; | |
| 292 pointer-events: auto !important; | |
| 293 } | |
| 1 | 294 </style></head> |
| 295 | |
| 296 <body id="type-a" class="noToggleCheck "> | |
| 297 <div id="wrap"> | |
| 298 | |
| 299 | |
| 300 <div id="content-wrap"> | |
| 301 | |
| 302 | |
| 303 | |
| 304 | |
| 305 | |
| 306 <!-- CDD info for old design --> | |
| 307 | |
| 308 | |
| 309 | |
| 310 | |
| 311 | |
| 312 | |
| 313 | |
| 314 | |
| 315 <div id="content"> | |
| 316 | |
| 317 <!--<ul id="msg" class="msg"><li class="info"><p class=""></p><p class=""></p><p class=""></p></li></ul>--> | |
| 318 | |
| 319 | |
| 320 | |
| 321 | |
| 322 | |
| 323 | |
| 324 | |
| 325 | |
| 326 <!-- Reformat and downlaod for new design --> | |
| 327 <!-- aria --> | |
| 328 <!-- aria --> | |
| 329 <form action="Blast.cgi" enctype="application/x-www-form-urlencoded" method="POST" name="overview0"> | |
| 330 | |
| 331 | |
| 332 | |
| 333 <div id="page"> | |
| 334 | |
| 335 <div id="summary" class=""> | |
| 336 | |
| 2 | 337 <h1>Nucleotide Sequence (16 letters) </h1> |
| 338 | |
| 1 | 339 <div id="summarylists"> |
| 340 <dl> | |
| 341 <dt>RID</dt> | |
| 342 <dd> | |
| 343 <a title="BLAST search request ID" href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014">PHWP1JNZ014</a> (Expires on 05-07 22:33 pm) | |
| 344 </dd> | |
| 345 </dl> | |
| 346 <div id="querysummary"> | |
| 347 <dl> | |
| 348 <dt>Query ID</dt> | |
| 349 <dd class="hidden"> | |
| 350 <a title="Find query in Entrez" href="http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Search&db=nucleotide&term=59987&dopt=GenBank" target="lnkPHWP1JNZ014">lcl|59987</a> | |
| 351 </dd> | |
| 352 <dd class="">lcl|59987</dd> | |
| 353 <dt>Description</dt> | |
| 354 <dd>None</dd> | |
| 355 <dt>Molecule type</dt> | |
| 356 <dd>nucleic acid</dd> | |
| 357 <dt>Query Length</dt> | |
| 358 <dd>16</dd> | |
| 359 </dl> | |
| 360 </div><!--/#querysummary--> | |
| 361 | |
| 362 <div id="dbsummary"> | |
| 363 <dl> | |
| 364 <dt> </dt><dd> </dd> | |
| 365 <dt>Database Name</dt> | |
| 366 <dd>pdb</dd> | |
| 367 <dt>Description</dt> | |
| 368 <dd>PDB nucleotide database <a aria-expanded="false" role="button" aria-disabled="false" href="#" title="See multiple databases detailed information" class="jtg resArrowLinkB hidden jig-ncbitoggler ui-ncbitoggler ui-widget" data-ncbitoggler-toggles="dbDetails" id="showDetails"><span class="ui-ncbitoggler-master-text">See details</span><span class="ui-icon ui-icon-triangle-1-e"></span></a></dd> <!-- -- Database or subject info ----> | |
| 369 <dt class="xgl">Program</dt> | |
| 370 <dd class="xgl">BLASTN 2.2.29+ <a aria-expanded="false" role="button" aria-disabled="false" href="#" title="How to cite BLAST in publications" class="resArrowLinkB hidden shown jig-ncbitoggler ui-ncbitoggler jtg ui-widget" data-ncbitoggler-toggles="refInfo" id="showRefs"><span class="ui-ncbitoggler-master-text">Citation</span><span class="ui-icon ui-icon-triangle-1-e"></span></a></dd> | |
| 371 </dl> | |
| 372 </div><!--/#dbsummary--> | |
| 373 </div><!--/#summarylists --> | |
| 374 | |
| 2 | 375 <!-- aria end --> |
| 376 <!-- aria end --> | |
| 377 | |
| 378 <!-- seealso --> | |
| 1 | 379 |
| 2 | 380 <!-- aria end --> |
| 1 | 381 </div><!--/#summary--> |
| 382 </div><!--/#page--> | |
| 383 | |
| 384 | |
| 385 <div id="grView" class="hidden shown"> | |
| 386 <h2 class="resArr"> | |
| 387 <a aria-expanded="true" role="button" aria-disabled="false" href="#" id="showGraphic" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget" data-jigconfig="indicator: 'plus-minus-big'" data-ncbitoggler-toggles="graphicInfo" title="Show/hide Graphic Summary"> | |
| 388 <span class="ui-ncbitoggler-master-text">Graphic Summary</span> | |
| 389 <span class="ui-icon ui-icon-plus-minus-big-open"></span> | |
| 390 </a> | |
| 391 </h2> | |
| 392 <div class="ui-helper-reset" aria-live="assertive"> | |
| 393 <div aria-hidden="false" id="graphicInfo" class="resBox ui-ncbitoggler-slave-open ui-widget ui-ncbitoggler"> | |
| 394 | |
| 395 | |
| 396 <div id="graphic" class="hidden shown"> | |
| 397 <h3>Distribution of 45 Blast Hits on the Query Sequence | |
| 398 <a aria-expanded="false" role="button" aria-disabled="false" class="helplink jig-ncbitoggler ui-ncbitoggler ui-widget" title="Graphic summary help" id="grHelp" href="#"><span class="ui-ncbitoggler-master-text"><span>[?]</span></span> | |
| 399 <span class="ui-icon ui-icon-triangle-1-e"></span></a></h3> | |
|
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400 <div class="ui-helper-reset" aria-live="assertive"> |
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401 </div> |
| 1 | 402 <center><input name="defline" size="85" value="Mouse-over to show defline and scores, click to show alignments" type="text"><table bordercolordark="#0000FF" bordercolorlight="#0000FF" border="1" cellpadding="10" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> |
| 403 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/score.gif" height="40" width="500"></td> | |
| 404 </tr></tbody></table> | |
| 405 <table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/query_no_scale.gif" height="10" width="550"></td></tr></tbody></table> | |
| 406 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="51"></td> | |
| 407 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 408 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="91"></td> | |
| 409 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 410 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="91"></td> | |
| 411 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 412 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="91"></td> | |
| 413 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 414 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="91"></td> | |
| 415 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 416 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="91"></td> | |
| 417 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/scale.gif" height="10" width="2"></td> | |
| 418 </tr></tbody></table> | |
| 419 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 420 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/1.gif" height="13" width="10"></td> | |
| 421 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="83"></td> | |
| 422 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/3.gif" height="13" width="10"></td> | |
| 423 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="83"></td> | |
| 424 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/6.gif" height="13" width="10"></td> | |
| 425 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="83"></td> | |
| 426 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/9.gif" height="13" width="10"></td> | |
| 427 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="73"></td> | |
| 428 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/1.gif" height="13" width="10"></td> | |
| 429 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/2.gif" height="13" width="10"></td> | |
| 430 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="73"></td> | |
| 431 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/1.gif" height="13" width="10"></td> | |
| 432 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/5.gif" height="13" width="10"></td> | |
| 433 </tr></tbody></table> | |
| 434 <br><table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 435 <td align="LEFT" valign="CENTER"><a href="#557804451" onclick='DisplayAlignFromGraphics("557804451",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J5A_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 436 </tr></tbody></table> | |
| 437 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 438 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 439 <td align="LEFT" valign="CENTER"><a href="#557804395" onclick='DisplayAlignFromGraphics("557804395",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J58_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 440 </tr></tbody></table> | |
| 441 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 442 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 443 <td align="LEFT" valign="CENTER"><a href="#557804339" onclick='DisplayAlignFromGraphics("557804339",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J56_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 444 </tr></tbody></table> | |
| 445 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 446 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 447 <td align="LEFT" valign="CENTER"><a href="#557804283" onclick='DisplayAlignFromGraphics("557804283",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J54_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 448 </tr></tbody></table> | |
| 449 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 450 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 451 <td align="LEFT" valign="CENTER"><a href="#557804227" onclick='DisplayAlignFromGraphics("557804227",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J52_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 452 </tr></tbody></table> | |
| 453 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 454 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 455 <td align="LEFT" valign="CENTER"><a href="#557804195" onclick='DisplayAlignFromGraphics("557804195",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J51_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 456 </tr></tbody></table> | |
| 457 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 458 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 459 <td align="LEFT" valign="CENTER"><a href="#557804163" onclick='DisplayAlignFromGraphics("557804163",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J50_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 460 </tr></tbody></table> | |
| 461 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 462 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 463 <td align="LEFT" valign="CENTER"><a href="#557804083" onclick='DisplayAlignFromGraphics("557804083",event)'><img alt="score 32" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J4X_A Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex I.. S=32 E=0.00079'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="500"></a></td> | |
| 464 </tr></tbody></table> | |
| 465 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 466 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 467 <td align="LEFT" valign="CENTER"><a href="#485601478" onclick='DisplayAlignFromGraphics("485601478",event)'><img alt="score 16" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3F_5 Chain 5, Structure Of The H. Sapiens 60s Rrna S=16 E=47'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="250"></a></td> | |
| 468 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="6" width="1"></td> | |
| 469 <td align="LEFT" valign="CENTER"><a href="#485601478" onclick='DisplayAlignFromGraphics("485601478",event)'><img alt="score 18" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3F_5 Chain 5, Structure Of The H. Sapiens 60s Rrna S=18 E=12'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="124"></a></td> | |
| 470 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="6" width="1"></td> | |
| 471 <td align="LEFT" valign="CENTER"><a href="#485601478" onclick='DisplayAlignFromGraphics("485601478",event)'><img alt="score 16" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3F_5 Chain 5, Structure Of The H. Sapiens 60s Rrna S=16 E=47'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="124"></a></td> | |
| 472 </tr></tbody></table> | |
| 473 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 474 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 475 <td align="LEFT" valign="CENTER"><a href="#485601474" onclick='DisplayAlignFromGraphics("485601474",event)'><img alt="score 14" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3E_5 Chain 5, Structure Of The D. Melanogaster 60s Rrna S=14 E=1.9e+02'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="219"></a></td> | |
| 476 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="6" width="1"></td> | |
| 477 <td align="LEFT" valign="CENTER"><a href="#485601474" onclick='DisplayAlignFromGraphics("485601474",event)'><img alt="score 18" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3E_5 Chain 5, Structure Of The D. Melanogaster 60s Rrna S=18 E=12'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="155"></a></td> | |
| 478 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="6" width="1"></td> | |
| 479 <td align="LEFT" valign="CENTER"><a href="#485601474" onclick='DisplayAlignFromGraphics("485601474",event)'><img alt="score 16" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J3E_5 Chain 5, Structure Of The D. Melanogaster 60s Rrna S=16 E=47'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="124"></a></td> | |
| 480 </tr></tbody></table> | |
| 481 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 482 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | |
| 483 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="94"></td> | |
| 484 <td align="LEFT" valign="CENTER"><a href="#357380483" onclick='DisplayAlignFromGraphics("357380483",event)'><img alt="score 18" onmouseout="document.overview0.defline.value='Mouse-over to show defline and scores, click to show alignments'" onmouseover="document.overview0.defline.value='3J0O_8 Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex .. S=18 E=12'" src="Blast%20output%20page%20example%20trimmed_files/black.gif" height="4" border="0" width="281"></a></td> | |
| 485 </tr></tbody></table> | |
| 486 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="550"></td></tr></tbody></table> | |
| 487 </td></tr></tbody></table> | |
| 488 </center><hr> | |
| 489 </div><!--/#graphic--> | |
| 490 </div><!-- graphicInfo --> | |
| 491 </div><!-- ARIA --> | |
| 492 </div> | |
| 493 <!--HITMATRIX_VIEW - only for bl2seq --> | |
| 494 | |
| 495 <div id="dscrView" class="hidden shown"> | |
| 496 <h2 class="resArr"> | |
| 497 <a aria-expanded="true" role="button" aria-disabled="false" href="#" id="showDescr" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget" data-jigconfig="indicator: 'plus-minus-big'" data-ncbitoggler-toggles="descrInfo" title="Show/hide Descriptions"> | |
| 498 <span class="ui-ncbitoggler-master-text">Descriptions</span> | |
| 499 <span class="ui-icon ui-icon-plus-minus-big-open"></span> | |
| 500 </a> | |
| 501 </h2> | |
| 502 <div class="ui-helper-reset" aria-live="assertive"> | |
| 503 <div aria-hidden="false" id="descrInfo" class="resBox ui-ncbitoggler-slave-open ui-widget ui-ncbitoggler"> | |
| 504 <!-- legend to links to other resources --> | |
| 505 | |
| 506 | |
| 507 <div id="descriptions" class="blRes"> | |
| 508 <!--<pre> --> | |
| 509 <div class="cap">Sequences producing significant alignments:</div> | |
| 510 <a id="shcl" href="#" onclick="showAllCol(event,this)" class="shcl hidden"> | |
| 511 Show all columns <span class="accsb"> of the table presenting sequences producing significant alignments </span> | |
| 512 </a> | |
| 513 <span id="cntDesc"> | |
| 514 <span>Select:<a href="#" id="cntSelA" sel="all">All</a><a href="#" id="cntSelN" sel="n">None</a></span> | |
| 515 <span>Selected:<span id="slcNum">0</span></span> | |
| 516 </span> | |
| 517 | |
| 518 <div id="descTblCtrl" class="cnf"> | |
| 519 <a href="#alignInfo" id="alnNav" class="toolsCtr alnNav" title="Go to alignments"><span>Alignments</span></a> | |
| 520 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dsDownload" minslct="1" class="jig-ncbipopper toolsCtr dnld dialog " data-jigconfig="hasArrow:'true',arrowDirection:'top'" id="dscDwnld" disabled="disabled" title="Download information for selected sequences"><span>Download</span></a> | |
| 521 | |
| 522 | |
| 523 | |
| 524 | |
| 525 | |
| 526 | |
| 527 <a href="#" class="toolsCtr" minslct="1" view="dflt" frm="submitterTop" seqlist="selSeqs" title="See genbank report for selected sequences" disabled="disabled">GenBank</a> <!-- genbank or Traces --> | |
| 528 <a href="#" class="toolsCtr " minslct="1" view="graph" title="See graphic representation for selected sequences" disabled="disabled">Graphics</a> | |
| 529 <a href="#" class="toolsCtr hidden shown" view="tree" minslct="1" frm="sbmtTreeView" seqlist="selSeqsTr" disabled="disabled" title="See a distance tree of pairwise comparisons for the selected sequences">Distance tree of results</a> | |
| 2 | 530 |
| 1 | 531 |
| 532 <a aria-haspopup="true" aria-expanded="false" role="button" class="jig-ncbipopper button_config" title="Show/hide columns" id="button_config" href="#dsConfig"><span class="accsb">Show/hide columns of the table presenting sequences producing significant alignments </span></a> | |
| 533 | |
| 2 | 534 <!-- dsConfig --> |
| 1 | 535 |
| 2 | 536 |
| 1 | 537 </div> |
| 538 <div class="ui-ncbigrid-outer-div caption-exists"> | |
| 539 <div class="ui-ncbigrid-inner-div"> | |
| 540 <table id="dscTable" class="jig-ncbigrid ui-ncbigrid" data-jigconfig="" cellpadding="0" cellspacing="0"> | |
| 541 <caption class="hdnHeader">Sequences producing significant alignments:</caption> | |
| 542 <thead> | |
| 543 <tr class="first"> | |
| 544 <th class="c0" id="c0"><span>Select for downloading or viewing reports</span></th> | |
| 545 <th class="dflnDth c2" id="c2">Description</th> | |
| 546 <th class=" c3" id="c3"> | |
| 547 | |
| 548 <a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&ALIGNMENTS=100&ALIGNMENT_VIEW=Pairwise&DATABASE_SORT=0&DESCRIPTIONS=100&DYNAMIC_FORMAT=on&FIRST_QUERY_NUM=0&FORMAT_OBJECT=Alignment&FORMAT_PAGE_TARGET=&FORMAT_TYPE=HTML&GET_SEQUENCE=yes&I_THRESH=&LINE_LENGTH=60&MASK_CHAR=2&MASK_COLOR=1&NUM_OVERVIEW=100&OLD_BLAST=false&PAGE=Nucleotides&QUERY_INDEX=0&QUERY_NUMBER=0&RESULTS_PAGE_TARGET=&RID=PHWP1JNZ014&SHOW_LINKOUT=yes&SHOW_OVERVIEW=yes&STEP_NUMBER=&WORD_SIZE=7&OLD_VIEW=false&DISPLAY_SORT=1&HSP_SORT=1" class="dcs" title="Sort by max score">Max score</a> | |
| 549 </th> | |
| 550 <th class=" c4" id="c4"> | |
| 551 <a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&ALIGNMENTS=100&ALIGNMENT_VIEW=Pairwise&DATABASE_SORT=0&DESCRIPTIONS=100&DYNAMIC_FORMAT=on&FIRST_QUERY_NUM=0&FORMAT_OBJECT=Alignment&FORMAT_PAGE_TARGET=&FORMAT_TYPE=HTML&GET_SEQUENCE=yes&I_THRESH=&LINE_LENGTH=60&MASK_CHAR=2&MASK_COLOR=1&NUM_OVERVIEW=100&OLD_BLAST=false&PAGE=Nucleotides&QUERY_INDEX=0&QUERY_NUMBER=0&RESULTS_PAGE_TARGET=&RID=PHWP1JNZ014&SHOW_LINKOUT=yes&SHOW_OVERVIEW=yes&STEP_NUMBER=&WORD_SIZE=7&OLD_VIEW=false&DISPLAY_SORT=2&HSP_SORT=1" class="dcs" title="Sort by total score">Total score</a> | |
| 552 </th> | |
| 553 <th class=" c5" id="c5"> | |
| 554 <a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&ALIGNMENTS=100&ALIGNMENT_VIEW=Pairwise&DATABASE_SORT=0&DESCRIPTIONS=100&DYNAMIC_FORMAT=on&FIRST_QUERY_NUM=0&FORMAT_OBJECT=Alignment&FORMAT_PAGE_TARGET=&FORMAT_TYPE=HTML&GET_SEQUENCE=yes&I_THRESH=&LINE_LENGTH=60&MASK_CHAR=2&MASK_COLOR=1&NUM_OVERVIEW=100&OLD_BLAST=false&PAGE=Nucleotides&QUERY_INDEX=0&QUERY_NUMBER=0&RESULTS_PAGE_TARGET=&RID=PHWP1JNZ014&SHOW_LINKOUT=yes&SHOW_OVERVIEW=yes&STEP_NUMBER=&WORD_SIZE=7&OLD_VIEW=false&DISPLAY_SORT=4&HSP_SORT=0" class="dcs" title="Sort by query coverage">Query cover</a> | |
| 555 </th> | |
| 556 <th class="sel c6" id="c6"> | |
| 557 <a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&ALIGNMENTS=100&ALIGNMENT_VIEW=Pairwise&DATABASE_SORT=0&DESCRIPTIONS=100&DYNAMIC_FORMAT=on&FIRST_QUERY_NUM=0&FORMAT_OBJECT=Alignment&FORMAT_PAGE_TARGET=&FORMAT_TYPE=HTML&GET_SEQUENCE=yes&I_THRESH=&LINE_LENGTH=60&MASK_CHAR=2&MASK_COLOR=1&NUM_OVERVIEW=100&OLD_BLAST=false&PAGE=Nucleotides&QUERY_INDEX=0&QUERY_NUMBER=0&RESULTS_PAGE_TARGET=&RID=PHWP1JNZ014&SHOW_LINKOUT=yes&SHOW_OVERVIEW=yes&STEP_NUMBER=&WORD_SIZE=7&OLD_VIEW=false&DISPLAY_SORT=0&HSP_SORT=0" class="dcs" title="Sort by E value">E value</a> | |
| 558 </th> | |
| 559 <th class="c7" id="c7"> | |
| 560 <a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&ALIGNMENTS=100&ALIGNMENT_VIEW=Pairwise&DATABASE_SORT=0&DESCRIPTIONS=100&DYNAMIC_FORMAT=on&FIRST_QUERY_NUM=0&FORMAT_OBJECT=Alignment&FORMAT_PAGE_TARGET=&FORMAT_TYPE=HTML&GET_SEQUENCE=yes&I_THRESH=&LINE_LENGTH=60&MASK_CHAR=2&MASK_COLOR=1&NUM_OVERVIEW=100&OLD_BLAST=false&PAGE=Nucleotides&QUERY_INDEX=0&QUERY_NUMBER=0&RESULTS_PAGE_TARGET=&RID=PHWP1JNZ014&SHOW_LINKOUT=yes&SHOW_OVERVIEW=yes&STEP_NUMBER=&WORD_SIZE=7&DISPLAY_SORT=3&HSP_SORT=3" class="dcs" title="Sort by ident">Ident</a> | |
| 561 </th> | |
| 562 | |
| 563 <th class="c1" id="c8">Accession</th> | |
| 564 </tr> | |
| 565 </thead> | |
| 566 <tbody> | |
| 567 <tr id="dtr_557804451" ind="1" class="odd dflLnk"> | |
| 568 <td class="l c0"><span class="ind">1</span><input id="chk_1" class="cb" name="getSeqGi" value="557804451" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_1" class="accsb">Select seq pdb|3J5A|A</label></td> | |
| 569 <td class="lim l c2"> | |
| 570 <div class="lim n"> | |
| 571 <a stat="disp" title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="1" accs="pdb|3J5A|A" seqfsta="gi|557804451" gi="557804451" seqid="557804451" id="deflnDesc_1" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804451">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)</a> | |
| 572 </div> | |
| 573 </td> | |
| 574 <td class="c3">32.2</td> | |
| 575 <td class="c4">77.3</td> | |
| 576 <td class="c5">100%</td> | |
| 577 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 578 <td class="c1 l lim"> | |
| 579 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nucltop&blast_rank=1&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J5A_A">3J5A_A</a> | |
| 580 </td> | |
| 581 </tr><tr id="dtr_557804395" ind="2" class="even dflLnk"> | |
| 582 <td class="l c0"><span class="ind">2</span><input id="chk_2" class="cb" name="getSeqGi" value="557804395" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_2" class="accsb">Select seq pdb|3J58|A</label></td> | |
| 583 <td class="lim l c2"> | |
| 584 <div class="lim n"> | |
| 585 <a stat="disp" title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="2" accs="pdb|3J58|A" seqfsta="gi|557804395" gi="557804395" seqid="557804395" id="deflnDesc_2" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804395">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)</a> | |
| 586 </div> | |
| 587 </td> | |
| 588 <td class="c3">32.2</td> | |
| 589 <td class="c4">77.3</td> | |
| 590 <td class="c5">100%</td> | |
| 591 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 592 <td class="c1 l lim"> | |
| 593 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nucltop&blast_rank=2&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J58_A">3J58_A</a> | |
| 594 </td> | |
| 595 </tr><tr id="dtr_557804339" ind="3" class="odd dflLnk"> | |
| 596 <td class="l c0"><span class="ind">3</span><input id="chk_3" class="cb" name="getSeqGi" value="557804339" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_3" class="accsb">Select seq pdb|3J56|A</label></td> | |
| 597 <td class="lim l c2"> | |
| 598 <div class="lim n"> | |
| 599 <a stat="disp" title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="3" accs="pdb|3J56|A" seqfsta="gi|557804339" gi="557804339" seqid="557804339" id="deflnDesc_3" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804339">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)</a> | |
| 600 </div> | |
| 601 </td> | |
| 602 <td class="c3">32.2</td> | |
| 603 <td class="c4">77.3</td> | |
| 604 <td class="c5">100%</td> | |
| 605 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 606 <td class="c1 l lim"> | |
| 607 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nucltop&blast_rank=3&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J56_A">3J56_A</a> | |
| 608 </td> | |
| 609 </tr><tr id="dtr_557804283" ind="4" class="even dflLnk"> | |
| 610 <td class="l c0"><span class="ind">4</span><input id="chk_4" class="cb" name="getSeqGi" value="557804283" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_4" class="accsb">Select seq pdb|3J54|A</label></td> | |
| 611 <td class="lim l c2"> | |
| 612 <div class="lim n"> | |
| 613 <a stat="disp" title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="4" accs="pdb|3J54|A" seqfsta="gi|557804283" gi="557804283" seqid="557804283" id="deflnDesc_4" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804283">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)</a> | |
| 614 </div> | |
| 615 </td> | |
| 616 <td class="c3">32.2</td> | |
| 617 <td class="c4">77.3</td> | |
| 618 <td class="c5">100%</td> | |
| 619 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 620 <td class="c1 l lim"> | |
| 621 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nucltop&blast_rank=4&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J54_A">3J54_A</a> | |
| 622 </td> | |
| 623 </tr><tr id="dtr_557804227" ind="5" class="odd dflLnk"> | |
| 624 <td class="l c0"><span class="ind">5</span><input id="chk_5" class="cb" name="getSeqGi" value="557804227" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_5" class="accsb">Select seq pdb|3J52|A</label></td> | |
| 625 <td class="lim l c2"> | |
| 626 <div class="lim n"> | |
| 627 <a stat="disp" title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="5" accs="pdb|3J52|A" seqfsta="gi|557804227" gi="557804227" seqid="557804227" id="deflnDesc_5" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804227">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)</a> | |
| 628 </div> | |
| 629 </td> | |
| 630 <td class="c3">32.2</td> | |
| 631 <td class="c4">77.3</td> | |
| 632 <td class="c5">100%</td> | |
| 633 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 634 <td class="c1 l lim"> | |
| 635 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nucltop&blast_rank=5&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J52_A">3J52_A</a> | |
| 636 </td> | |
| 637 </tr><tr id="dtr_557804195" ind="6" class="even dflLnk"> | |
| 638 <td class="l c0"><span class="ind">6</span><input id="chk_6" class="cb" name="getSeqGi" value="557804195" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_6" class="accsb">Select seq pdb|3J51|A</label></td> | |
| 639 <td class="lim l c2"> | |
| 640 <div class="lim n"> | |
| 641 <a title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="6" accs="pdb|3J51|A" seqfsta="gi|557804195" gi="557804195" seqid="557804195" id="deflnDesc_6" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804195">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)</a> | |
| 642 </div> | |
| 643 </td> | |
| 644 <td class="c3">32.2</td> | |
| 645 <td class="c4">77.3</td> | |
| 646 <td class="c5">100%</td> | |
| 647 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 648 <td class="c1 l lim"> | |
| 649 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804195?report=genbank&log$=nucltop&blast_rank=6&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J51_A">3J51_A</a> | |
| 650 </td> | |
| 651 </tr><tr id="dtr_557804163" ind="7" class="odd dflLnk"> | |
| 652 <td class="l c0"><span class="ind">7</span><input id="chk_7" class="cb" name="getSeqGi" value="557804163" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_7" class="accsb">Select seq pdb|3J50|A</label></td> | |
| 653 <td class="lim l c2"> | |
| 654 <div class="lim n"> | |
| 655 <a title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="7" accs="pdb|3J50|A" seqfsta="gi|557804163" gi="557804163" seqid="557804163" id="deflnDesc_7" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804163">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)</a> | |
| 656 </div> | |
| 657 </td> | |
| 658 <td class="c3">32.2</td> | |
| 659 <td class="c4">77.3</td> | |
| 660 <td class="c5">100%</td> | |
| 661 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 662 <td class="c1 l lim"> | |
| 663 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804163?report=genbank&log$=nucltop&blast_rank=7&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J50_A">3J50_A</a> | |
| 664 </td> | |
| 665 </tr><tr id="dtr_557804083" ind="8" class="even dflLnk"> | |
| 666 <td class="l c0"><span class="ind">8</span><input id="chk_8" class="cb" name="getSeqGi" value="557804083" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_8" class="accsb">Select seq pdb|3J4X|A</label></td> | |
| 667 <td class="lim l c2"> | |
| 668 <div class="lim n"> | |
| 669 <a title="Go to alignment for Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)" class="deflnDesc" hsp="4" len="38" ind="8" accs="pdb|3J4X|A" seqfsta="gi|557804083" gi="557804083" seqid="557804083" id="deflnDesc_8" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_557804083">Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)</a> | |
| 670 </div> | |
| 671 </td> | |
| 672 <td class="c3">32.2</td> | |
| 673 <td class="c4">77.3</td> | |
| 674 <td class="c5">100%</td> | |
| 675 <td class="c6">8e-04</td><td class="c7">100%</td> | |
| 676 <td class="c1 l lim"> | |
| 677 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804083?report=genbank&log$=nucltop&blast_rank=8&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J4X_A">3J4X_A</a> | |
| 678 </td> | |
| 679 </tr><tr id="dtr_485601478" ind="9" class="odd dflLnk"> | |
| 680 <td class="l c0"><span class="ind">9</span><input id="chk_9" class="cb" name="getSeqGi" value="485601478" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_9" class="accsb">Select seq pdb|3J3F|5</label></td> | |
| 681 <td class="lim l c2"> | |
| 682 <div class="lim n"> | |
| 683 <a title="Go to alignment for Chain 5, Structure Of The H. Sapiens 60s Rrna" class="deflnDesc" hsp="8" len="63" ind="9" accs="pdb|3J3F|5" seqfsta="gi|485601478" gi="485601478" seqid="485601478" id="deflnDesc_9" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_485601478">Chain 5, Structure Of The H. Sapiens 60s Rrna</a> | |
| 684 </div> | |
| 685 </td> | |
| 686 <td class="c3">18.3</td> | |
| 687 <td class="c4"> 128</td> | |
| 688 <td class="c5">100%</td> | |
| 689 <td class="c6"> 12</td><td class="c7">100%</td> | |
| 690 <td class="c1 l lim"> | |
| 691 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/485601478?report=genbank&log$=nucltop&blast_rank=9&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J3F_5">3J3F_5</a> | |
| 692 </td> | |
| 693 </tr><tr id="dtr_485601474" ind="10" class="even dflLnk"> | |
| 694 <td class="l c0"><span class="ind">10</span><input id="chk_10" class="cb" name="getSeqGi" value="485601474" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_10" class="accsb">Select seq pdb|3J3E|5</label></td> | |
| 695 <td class="lim l c2"> | |
| 696 <div class="lim n"> | |
| 697 <a title="Go to alignment for Chain 5, Structure Of The D. Melanogaster 60s Rrna" class="deflnDesc" hsp="4" len="31" ind="10" accs="pdb|3J3E|5" seqfsta="gi|485601474" gi="485601474" seqid="485601474" id="deflnDesc_10" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_485601474">Chain 5, Structure Of The D. Melanogaster 60s Rrna</a> | |
| 698 </div> | |
| 699 </td> | |
| 700 <td class="c3">18.3</td> | |
| 701 <td class="c4">63.4</td> | |
| 702 <td class="c5">100%</td> | |
| 703 <td class="c6"> 12</td><td class="c7">100%</td> | |
| 704 <td class="c1 l lim"> | |
| 705 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/485601474?report=genbank&log$=nucltop&blast_rank=10&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J3E_5">3J3E_5</a> | |
| 706 </td> | |
| 707 </tr><tr id="dtr_357380483" ind="11" class="odd dflLnk"> | |
| 708 <td class="l c0"><span class="ind">11</span><input id="chk_11" class="cb" name="getSeqGi" value="357380483" onclick="configDescrLinks(event,this)" type="checkbox"><label for="chk_11" class="accsb">Select seq pdb|3J0O|8</label></td> | |
| 709 <td class="lim l c2"> | |
| 710 <div class="lim n"> | |
| 711 <a title="Go to alignment for Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2" class="deflnDesc" hsp="1" len="9" ind="11" accs="pdb|3J0O|8" seqfsta="gi|357380483" gi="357380483" seqid="357380483" id="deflnDesc_11" onclick="DisplayAlignFromDescription(this);" href="#alnHdr_357380483">Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2</a> | |
| 712 </div> | |
| 713 </td> | |
| 714 <td class="c3">18.3</td> | |
| 715 <td class="c4">18.3</td> | |
| 716 <td class="c5">56%</td> | |
| 717 <td class="c6"> 12</td><td class="c7">100%</td> | |
| 718 <td class="c1 l lim"> | |
| 719 <a href="http://www.ncbi.nlm.nih.gov/nucleotide/357380483?report=genbank&log$=nucltop&blast_rank=11&RID=PHWP1JNZ014" class="dflSeq" target="lnkPHWP1JNZ014" title="Show report for 3J0O_8">3J0O_8</a> | |
| 720 </td> | |
| 721 </tr> | |
| 722 </tbody> | |
| 723 </table> | |
| 724 </div></div> | |
| 725 <!--</pre> --> | |
| 726 </div><!--/#descriptions--> | |
| 727 </div><!-- descrInfo --> | |
| 728 </div><!--ARIA--> | |
| 729 </div> | |
| 730 </form><!-- this is the end tag for the <form in blastcgi templates --> | |
| 731 | |
| 732 | |
| 733 | |
| 734 | |
| 735 | |
| 736 <!-- used in redesign --> | |
| 737 | |
| 738 <div id="alignView" class=" "> | |
| 739 <h2 class="resArr"> | |
| 740 <a aria-expanded="true" role="button" aria-disabled="false" href="#" id="showAlign" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget" data-jigconfig="indicator: 'plus-minus-big'" data-ncbitoggler-toggles="alignInfo" title="Show/hide Alignments"> | |
| 741 <span class="ui-ncbitoggler-master-text">Alignments</span> | |
| 742 <span class="ui-icon ui-icon-plus-minus-big-open"></span> | |
| 743 </a> | |
| 744 </h2> | |
| 745 | |
| 746 <div class="ui-helper-reset" aria-live="assertive"> | |
| 747 <div aria-hidden="false" id="alignInfo" class="resBox ui-ncbitoggler-slave-open ui-widget ui-ncbitoggler"> | |
| 748 <div id="alignments" class="blRes"> | |
| 749 <span id="alnStart"></span><div seqlist="gi|557804451,gi|557804395,gi|557804339,gi|557804283,gi|557804227" indexes="1-5" id="alnShow_1" class="alnMsg"><div class="alnMsgS hidden" id="alnMsg_1">Loading alignment...<span class="db"> for sequences gi|557804451,gi|557804395,gi|557804339,gi|557804283,gi|557804227 Reading indexes 1-5</span></div><div id="alnShowReal_1" class="alnMsgR"><form name="getSeqAlignment1"> | |
| 750 <div class="alnHdr cnf" id="alnHdr_557804451" seqid="557804451" accs="pdb|3J5A|A"> | |
| 751 <a name="557804451"></a> | |
| 752 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dlgDwnl_557804451" class="jig-ncbipopper toolsCtr dnld dialog" data-jigconfig="hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'" id="alnDwnld_557804451" title="Download information for pdb|3J5A|A"><span>Download</span></a> | |
| 753 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dlgDwnl_557804451" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | |
| 754 <div><input seqfsta="gi|557804451" name="dwn_557804451" checked="checked" id="dwFST_557804451" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST_557804451">FASTA (complete sequence)</label></div> | |
| 755 <div><input seqfsta="gi|557804451" name="dwn_557804451" id="dwFSTAl_557804451" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl_557804451">FASTA (aligned sequences)</label></div> | |
| 756 <div class=""><input name="dwn_557804451" id="dwGenBank_557804451" getgi="557804451" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class="shownInl" for="dwGenBank_557804451">GenBank (complete sequence)</label></div> | |
| 757 <div> | |
| 758 <button class="cfg" id="dw_cont_557804451">Continue</button> | |
| 759 <button class="cfg cnc">Cancel</button> | |
| 760 </div> | |
| 761 </div> <!-- dsDownload --> | |
| 762 <span class="csLinks" id="csLinks_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014" class="" target="lnkPHWP1JNZ014" title="Show genbank report for 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=752:2685&appname=ncbiblast&link_loc=fromSubj" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics">Graphics</a></span> | |
| 763 | |
| 764 <div class="seqlinks alnDflLn alnSortSeq"><label>Sort by:</label> | |
| 765 <select id="sa_557804451" onchange="SortHSPAlnSel(event,this)"> | |
| 766 <option selected="selected" value="0">E value</option> | |
| 767 <option value="1"> Score</option> | |
| 768 <option value="3">Percent identity</option> | |
| 769 <option value="2">Query start position</option> | |
| 770 <option value="4">Subject start position</option> | |
| 771 </select> | |
| 772 </div> | |
| 773 <span class="alnSeqLinks"> | |
| 774 <a title="Go to next alignment for pdb|3J58|A" class="gbd toolsCtr navNext" ref="ordinalpos=1&currseq=557804451" id="alnNxt_557804451" onclick="goToNextAlign('dtr_557804451',true);"><span>Next</span></a> | |
| 775 <a disabled="disabled" class="gbd toolsCtr navPrev" ref="ordinalpos=1&currseq=557804451" id="alnPrv_557804451" onclick="goToNextAlign('dtr_557804451',false);"><span>Previous</span></a> | |
| 776 <a class="gbd toolsCtr navBack" title="Go to definition line for pdb|3J5A|A" id="alnDsc_557804451" onclick="goToDefLine('dtr_557804451');" href="#dtr_557804451"><span>Descriptions</span></a> | |
| 777 </span> | |
| 778 </div> | |
| 779 <div class="oneSeqAln" id="aln_557804451"> | |
| 780 <div id="dln_557804451"> | |
| 781 <div class="dlfRow"> | |
| 782 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit) | |
| 783 <div><label>Sequence ID: </label><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014" title="Show report for pdb|3J5A|A">pdb|3J5A|A</a><span class=" r"><label>Length: </label>2903<label>Number of Matches: </label>4</span></div> | |
| 784 </div> | |
| 785 </div> | |
| 786 <div class="relInf" id="relInf_557804451"><label>Related Information</label></div> | |
| 787 <!-- | |
| 788 <pre> | |
| 789 <@aln_gene_info@> | |
| 790 </pre> | |
| 791 --> | |
| 792 <div class="alnAll" id="alnAll_557804451"><div id="hd_557804451_1"> | |
| 793 <div class="dflLnk hsp"><span class="alnRn"><label>Range 1: 961 to 976</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=961&to=976" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 961 to 976 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=961:976&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 961 to 976 range">Graphics</a></span></span> | |
| 794 <span id="hsp557804451_1" class="alnParLinks"> | |
| 795 <a init="on" class="gbd toolsCtr navNext" title="Go to next match #2 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 796 <a class="gbd toolsCtr navPrev" disabled="disabled" title="Go to previous match #0 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 797 <a class="gbd toolsCtr navBack hidden" href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> | |
| 798 </span> | |
| 799 </div> | |
| 800 <table class="alnParams"> | |
| 801 <caption class="hdnHeader">Alignment statistics for match #1</caption> | |
| 802 <tbody><tr> | |
| 803 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 804 </tr> | |
| 805 <tr> | |
| 806 <td>32.2 bits(16)</td> | |
| 807 <td>8e-04<span class="sumN ">()</span></td> | |
| 808 <td>16/16(100%)</td> | |
| 809 <td>0/16(0%)</td> | |
| 810 <td>Plus/Plus</td> | |
| 811 <td class="aln_frame "></td> | |
| 812 </tr></tbody></table> | |
| 813 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 814 </div> | |
| 815 <div id="ar_557804451_1"> | |
| 816 <pre>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 817 |||||||||||||||| | |
| 818 Sbjct 961 CGTCCGTCGTGAAGAG 976 | |
| 819 | |
| 820 | |
| 821 </pre> | |
| 822 </div> | |
| 823 <div id="hd_557804451_2"> | |
| 824 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | |
| 825 <span id="hsp557804451_2" class="alnParLinks"> | |
| 826 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 2 | 827 <a init="on" class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> |
| 1 | 828 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> |
| 829 </span> | |
| 830 </div> | |
| 831 <table class="alnParams"> | |
| 832 <caption class="hdnHeader">Alignment statistics for match #2</caption> | |
| 833 <tbody><tr> | |
| 834 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 835 </tr> | |
| 836 <tr> | |
| 837 <td>16.4 bits(8)</td> | |
| 838 <td> 47<span class="sumN ">()</span></td> | |
| 839 <td>8/8(100%)</td> | |
| 840 <td>0/8(0%)</td> | |
| 841 <td>Plus/Plus</td> | |
| 842 <td class="aln_frame "></td> | |
| 843 </tr></tbody></table> | |
| 844 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 845 </div> | |
| 846 <div id="ar_557804451_2"> | |
| 847 <pre>Query 5 CGTCGTGA 12 | |
| 848 |||||||| | |
| 849 Sbjct 2591 CGTCGTGA 2598 | |
| 850 | |
| 851 | |
| 852 </pre> | |
| 853 </div> | |
| 854 <div id="hd_557804451_3"> | |
| 855 <div class="dflLnk hsp"><span class="alnRn"><label>Range 3: 839 to 845</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=839&to=845" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 839 to 845 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=839:845&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 839 to 845 range">Graphics</a></span></span> | |
| 856 <span id="hsp557804451_3" class="alnParLinks"> | |
| 857 <a class="gbd toolsCtr navNext" title="Go to next match #4 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 858 <a class="gbd toolsCtr navPrev" title="Go to previous match #2 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 859 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> | |
| 860 </span> | |
| 861 </div> | |
| 862 <table class="alnParams"> | |
| 863 <caption class="hdnHeader">Alignment statistics for match #3</caption> | |
| 864 <tbody><tr> | |
| 865 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 866 </tr> | |
| 867 <tr> | |
| 868 <td>14.4 bits(7)</td> | |
| 869 <td> 186<span class="sumN ">()</span></td> | |
| 870 <td>7/7(100%)</td> | |
| 871 <td>0/7(0%)</td> | |
| 872 <td>Plus/Plus</td> | |
| 873 <td class="aln_frame "></td> | |
| 874 </tr></tbody></table> | |
| 875 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 876 </div> | |
| 877 <div id="ar_557804451_3"> | |
| 878 <pre>Query 7 TCGTGAA 13 | |
| 879 ||||||| | |
| 880 Sbjct 839 TCGTGAA 845 | |
| 881 | |
| 882 | |
| 883 </pre> | |
| 884 </div> | |
| 885 <div id="hd_557804451_4"> | |
| 886 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | |
| 887 <span id="hsp557804451_4" class="alnParLinks"> | |
| 2 | 888 <a init="on" class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> |
| 889 <a init="on" class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1 | 890 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> |
| 891 </span> | |
| 892 </div> | |
| 893 <table class="alnParams"> | |
| 894 <caption class="hdnHeader">Alignment statistics for match #4</caption> | |
| 895 <tbody><tr> | |
| 896 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 897 </tr> | |
| 898 <tr> | |
| 899 <td>14.4 bits(7)</td> | |
| 900 <td> 186<span class="sumN ">()</span></td> | |
| 901 <td>7/7(100%)</td> | |
| 902 <td>0/7(0%)</td> | |
| 903 <td>Plus/Plus</td> | |
| 904 <td class="aln_frame "></td> | |
| 905 </tr></tbody></table> | |
| 906 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 907 </div> | |
| 908 <div id="ar_557804451_4"> | |
| 909 <pre>Query 9 GTGAAGA 15 | |
| 910 ||||||| | |
| 911 Sbjct 2027 GTGAAGA 2033 | |
| 912 | |
| 913 | |
| 914 </pre> | |
| 915 </div> | |
| 916 </div> <!-- alnAll_557804451 --> | |
| 917 </div> <!-- aln_557804451 --> | |
| 918 <div class="alnHdr cnf" id="alnHdr_557804395" seqid="557804395" accs="pdb|3J58|A"> | |
| 919 <a name="557804395"></a> | |
| 920 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dlgDwnl_557804395" class="jig-ncbipopper toolsCtr dnld dialog" data-jigconfig="hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'" id="alnDwnld_557804395" title="Download information for pdb|3J58|A"><span>Download</span></a> | |
| 921 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dlgDwnl_557804395" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | |
| 922 <div><input seqfsta="gi|557804395" name="dwn_557804395" checked="checked" id="dwFST_557804395" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST_557804395">FASTA (complete sequence)</label></div> | |
| 923 <div><input seqfsta="gi|557804395" name="dwn_557804395" id="dwFSTAl_557804395" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl_557804395">FASTA (aligned sequences)</label></div> | |
| 924 <div class=""><input name="dwn_557804395" id="dwGenBank_557804395" getgi="557804395" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class="shownInl" for="dwGenBank_557804395">GenBank (complete sequence)</label></div> | |
| 925 <div> | |
| 926 <button class="cfg" id="dw_cont_557804395">Continue</button> | |
| 927 <button class="cfg cnc">Cancel</button> | |
| 928 </div> | |
| 929 </div> <!-- dsDownload --> | |
| 930 <span class="csLinks" id="csLinks_557804395"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014" class="" target="lnkPHWP1JNZ014" title="Show genbank report for 3J58_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804395?report=graph&rid=PHWP1JNZ014[557804395]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=752:2685&appname=ncbiblast&link_loc=fromSubj" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J58_A in Nucleotide Graphics">Graphics</a></span> | |
| 931 | |
| 932 <div class="seqlinks alnDflLn alnSortSeq"><label>Sort by:</label> | |
| 933 <select id="sa_557804395" onchange="SortHSPAlnSel(event,this)"> | |
| 934 <option selected="selected" value="0">E value</option> | |
| 935 <option value="1"> Score</option> | |
| 936 <option value="3">Percent identity</option> | |
| 937 <option value="2">Query start position</option> | |
| 938 <option value="4">Subject start position</option> | |
| 939 </select> | |
| 940 </div> | |
| 941 <span class="alnSeqLinks"> | |
| 942 <a title="Go to next alignment for pdb|3J56|A" class="gbd toolsCtr navNext" ref="ordinalpos=2&currseq=557804395" id="alnNxt_557804395" onclick="goToNextAlign('dtr_557804395',true);"><span>Next</span></a> | |
| 943 <a title="Go to previous alignment for pdb|3J5A|A" class="gbd toolsCtr navPrev" ref="ordinalpos=2&currseq=557804395" id="alnPrv_557804395" onclick="goToNextAlign('dtr_557804395',false);"><span>Previous</span></a> | |
| 944 <a class="gbd toolsCtr navBack" title="Go to definition line for pdb|3J58|A" id="alnDsc_557804395" onclick="goToDefLine('dtr_557804395');" href="#dtr_557804395"><span>Descriptions</span></a> | |
| 945 </span> | |
| 946 </div> | |
| 947 <div class="oneSeqAln" id="aln_557804395"> | |
| 948 <div id="dln_557804395"> | |
| 949 <div class="dlfRow"> | |
| 950 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit) | |
| 951 <div><label>Sequence ID: </label><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014" title="Show report for pdb|3J58|A">pdb|3J58|A</a><span class=" r"><label>Length: </label>2903<label>Number of Matches: </label>4</span></div> | |
| 952 </div> | |
| 953 </div> | |
| 954 <div class="relInf" id="relInf_557804395"><label>Related Information</label></div> | |
| 955 <!-- | |
| 956 <pre> | |
| 957 <@aln_gene_info@> | |
| 958 </pre> | |
| 959 --> | |
| 960 <div class="alnAll" id="alnAll_557804395"><div id="hd_557804395_1"> | |
| 961 <div class="dflLnk hsp"><span class="alnRn"><label>Range 1: 961 to 976</label><span class="" id="rng_557804395"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014&from=961&to=976" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 961 to 976 on 3J58_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804395?report=graph&rid=PHWP1JNZ014[557804395]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=961:976&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J58_A in Nucleotide Graphics for 961 to 976 range">Graphics</a></span></span> | |
| 962 <span id="hsp557804395_1" class="alnParLinks"> | |
| 963 <a class="gbd toolsCtr navNext" title="Go to next match #2 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804395" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 964 <a class="gbd toolsCtr navPrev" disabled="disabled" title="Go to previous match #0 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804395" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 965 <a class="gbd toolsCtr navBack hidden" href="#hsp557804395_1" title="Go to first match for pdb|3J58|A"><span>First Match</span></a> | |
| 966 </span> | |
| 967 </div> | |
| 968 <table class="alnParams"> | |
| 969 <caption class="hdnHeader">Alignment statistics for match #1</caption> | |
| 970 <tbody><tr> | |
| 971 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 972 </tr> | |
| 973 <tr> | |
| 974 <td>32.2 bits(16)</td> | |
| 975 <td>8e-04<span class="sumN ">()</span></td> | |
| 976 <td>16/16(100%)</td> | |
| 977 <td>0/16(0%)</td> | |
| 978 <td>Plus/Plus</td> | |
| 979 <td class="aln_frame "></td> | |
| 980 </tr></tbody></table> | |
| 981 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 982 </div> | |
| 983 <div id="ar_557804395_1"> | |
| 984 <pre>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 985 |||||||||||||||| | |
| 986 Sbjct 961 CGTCCGTCGTGAAGAG 976 | |
| 987 | |
| 988 | |
| 989 </pre> | |
| 990 </div> | |
| 991 <div id="hd_557804395_2"> | |
| 992 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804395"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J58_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804395?report=graph&rid=PHWP1JNZ014[557804395]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J58_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | |
| 993 <span id="hsp557804395_2" class="alnParLinks"> | |
| 994 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804395" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 995 <a class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804395" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 996 <a class="gbd toolsCtr navBack " href="#hsp557804395_1" title="Go to first match for pdb|3J58|A"><span>First Match</span></a> | |
| 997 </span> | |
| 998 </div> | |
| 999 <table class="alnParams"> | |
| 1000 <caption class="hdnHeader">Alignment statistics for match #2</caption> | |
| 1001 <tbody><tr> | |
| 1002 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1003 </tr> | |
| 1004 <tr> | |
| 1005 <td>16.4 bits(8)</td> | |
| 1006 <td> 47<span class="sumN ">()</span></td> | |
| 1007 <td>8/8(100%)</td> | |
| 1008 <td>0/8(0%)</td> | |
| 1009 <td>Plus/Plus</td> | |
| 1010 <td class="aln_frame "></td> | |
| 1011 </tr></tbody></table> | |
| 1012 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1013 </div> | |
| 1014 <div id="ar_557804395_2"> | |
| 1015 <pre>Query 5 CGTCGTGA 12 | |
| 1016 |||||||| | |
| 1017 Sbjct 2591 CGTCGTGA 2598 | |
| 1018 | |
| 1019 | |
| 1020 </pre> | |
| 1021 </div> | |
| 1022 <div id="hd_557804395_3"> | |
| 1023 <div class="dflLnk hsp"><span class="alnRn"><label>Range 3: 839 to 845</label><span class="" id="rng_557804395"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014&from=839&to=845" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 839 to 845 on 3J58_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804395?report=graph&rid=PHWP1JNZ014[557804395]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=839:845&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J58_A in Nucleotide Graphics for 839 to 845 range">Graphics</a></span></span> | |
| 1024 <span id="hsp557804395_3" class="alnParLinks"> | |
| 1025 <a class="gbd toolsCtr navNext" title="Go to next match #4 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804395" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1026 <a class="gbd toolsCtr navPrev" title="Go to previous match #2 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804395" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1027 <a class="gbd toolsCtr navBack " href="#hsp557804395_1" title="Go to first match for pdb|3J58|A"><span>First Match</span></a> | |
| 1028 </span> | |
| 1029 </div> | |
| 1030 <table class="alnParams"> | |
| 1031 <caption class="hdnHeader">Alignment statistics for match #3</caption> | |
| 1032 <tbody><tr> | |
| 1033 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1034 </tr> | |
| 1035 <tr> | |
| 1036 <td>14.4 bits(7)</td> | |
| 1037 <td> 186<span class="sumN ">()</span></td> | |
| 1038 <td>7/7(100%)</td> | |
| 1039 <td>0/7(0%)</td> | |
| 1040 <td>Plus/Plus</td> | |
| 1041 <td class="aln_frame "></td> | |
| 1042 </tr></tbody></table> | |
| 1043 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1044 </div> | |
| 1045 <div id="ar_557804395_3"> | |
| 1046 <pre>Query 7 TCGTGAA 13 | |
| 1047 ||||||| | |
| 1048 Sbjct 839 TCGTGAA 845 | |
| 1049 | |
| 1050 | |
| 1051 </pre> | |
| 1052 </div> | |
| 1053 <div id="hd_557804395_4"> | |
| 1054 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804395"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&log$=nuclalign&blast_rank=2&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J58_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804395?report=graph&rid=PHWP1JNZ014[557804395]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J58_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | |
| 1055 <span id="hsp557804395_4" class="alnParLinks"> | |
| 1056 <a class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804395" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1057 <a class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J58|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804395" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1058 <a class="gbd toolsCtr navBack " href="#hsp557804395_1" title="Go to first match for pdb|3J58|A"><span>First Match</span></a> | |
| 1059 </span> | |
| 1060 </div> | |
| 1061 <table class="alnParams"> | |
| 1062 <caption class="hdnHeader">Alignment statistics for match #4</caption> | |
| 1063 <tbody><tr> | |
| 1064 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1065 </tr> | |
| 1066 <tr> | |
| 1067 <td>14.4 bits(7)</td> | |
| 1068 <td> 186<span class="sumN ">()</span></td> | |
| 1069 <td>7/7(100%)</td> | |
| 1070 <td>0/7(0%)</td> | |
| 1071 <td>Plus/Plus</td> | |
| 1072 <td class="aln_frame "></td> | |
| 1073 </tr></tbody></table> | |
| 1074 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1075 </div> | |
| 1076 <div id="ar_557804395_4"> | |
| 1077 <pre>Query 9 GTGAAGA 15 | |
| 1078 ||||||| | |
| 1079 Sbjct 2027 GTGAAGA 2033 | |
| 1080 | |
| 1081 | |
| 1082 </pre> | |
| 1083 </div> | |
| 1084 </div> <!-- alnAll_557804395 --> | |
| 1085 </div> <!-- aln_557804395 --> | |
| 1086 <div class="alnHdr cnf" id="alnHdr_557804339" seqid="557804339" accs="pdb|3J56|A"> | |
| 1087 <a name="557804339"></a> | |
| 1088 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dlgDwnl_557804339" class="jig-ncbipopper toolsCtr dnld dialog" data-jigconfig="hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'" id="alnDwnld_557804339" title="Download information for pdb|3J56|A"><span>Download</span></a> | |
| 1089 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dlgDwnl_557804339" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | |
| 1090 <div><input seqfsta="gi|557804339" name="dwn_557804339" checked="checked" id="dwFST_557804339" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST_557804339">FASTA (complete sequence)</label></div> | |
| 1091 <div><input seqfsta="gi|557804339" name="dwn_557804339" id="dwFSTAl_557804339" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl_557804339">FASTA (aligned sequences)</label></div> | |
| 1092 <div class=""><input name="dwn_557804339" id="dwGenBank_557804339" getgi="557804339" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class="shownInl" for="dwGenBank_557804339">GenBank (complete sequence)</label></div> | |
| 1093 <div> | |
| 1094 <button class="cfg" id="dw_cont_557804339">Continue</button> | |
| 1095 <button class="cfg cnc">Cancel</button> | |
| 1096 </div> | |
| 1097 </div> <!-- dsDownload --> | |
| 1098 <span class="csLinks" id="csLinks_557804339"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014" class="" target="lnkPHWP1JNZ014" title="Show genbank report for 3J56_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804339?report=graph&rid=PHWP1JNZ014[557804339]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=752:2685&appname=ncbiblast&link_loc=fromSubj" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J56_A in Nucleotide Graphics">Graphics</a></span> | |
| 1099 | |
| 1100 <div class="seqlinks alnDflLn alnSortSeq"><label>Sort by:</label> | |
| 1101 <select id="sa_557804339" onchange="SortHSPAlnSel(event,this)"> | |
| 1102 <option selected="selected" value="0">E value</option> | |
| 1103 <option value="1"> Score</option> | |
| 1104 <option value="3">Percent identity</option> | |
| 1105 <option value="2">Query start position</option> | |
| 1106 <option value="4">Subject start position</option> | |
| 1107 </select> | |
| 1108 </div> | |
| 1109 <span class="alnSeqLinks"> | |
| 1110 <a title="Go to next alignment for pdb|3J54|A" class="gbd toolsCtr navNext" ref="ordinalpos=3&currseq=557804339" id="alnNxt_557804339" onclick="goToNextAlign('dtr_557804339',true);"><span>Next</span></a> | |
| 1111 <a title="Go to previous alignment for pdb|3J58|A" class="gbd toolsCtr navPrev" ref="ordinalpos=3&currseq=557804339" id="alnPrv_557804339" onclick="goToNextAlign('dtr_557804339',false);"><span>Previous</span></a> | |
| 1112 <a class="gbd toolsCtr navBack" title="Go to definition line for pdb|3J56|A" id="alnDsc_557804339" onclick="goToDefLine('dtr_557804339');" href="#dtr_557804339"><span>Descriptions</span></a> | |
| 1113 </span> | |
| 1114 </div> | |
| 1115 <div class="oneSeqAln" id="aln_557804339"> | |
| 1116 <div id="dln_557804339"> | |
| 1117 <div class="dlfRow"> | |
| 1118 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit) | |
| 1119 <div><label>Sequence ID: </label><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014" title="Show report for pdb|3J56|A">pdb|3J56|A</a><span class=" r"><label>Length: </label>2903<label>Number of Matches: </label>4</span></div> | |
| 1120 </div> | |
| 1121 </div> | |
| 1122 <div class="relInf" id="relInf_557804339"><label>Related Information</label></div> | |
| 1123 <!-- | |
| 1124 <pre> | |
| 1125 <@aln_gene_info@> | |
| 1126 </pre> | |
| 1127 --> | |
| 1128 <div class="alnAll" id="alnAll_557804339"><div id="hd_557804339_1"> | |
| 1129 <div class="dflLnk hsp"><span class="alnRn"><label>Range 1: 961 to 976</label><span class="" id="rng_557804339"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014&from=961&to=976" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 961 to 976 on 3J56_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804339?report=graph&rid=PHWP1JNZ014[557804339]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=961:976&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J56_A in Nucleotide Graphics for 961 to 976 range">Graphics</a></span></span> | |
| 1130 <span id="hsp557804339_1" class="alnParLinks"> | |
| 1131 <a class="gbd toolsCtr navNext" title="Go to next match #2 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804339" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1132 <a class="gbd toolsCtr navPrev" disabled="disabled" title="Go to previous match #0 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804339" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1133 <a class="gbd toolsCtr navBack hidden" href="#hsp557804339_1" title="Go to first match for pdb|3J56|A"><span>First Match</span></a> | |
| 1134 </span> | |
| 1135 </div> | |
| 1136 <table class="alnParams"> | |
| 1137 <caption class="hdnHeader">Alignment statistics for match #1</caption> | |
| 1138 <tbody><tr> | |
| 1139 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1140 </tr> | |
| 1141 <tr> | |
| 1142 <td>32.2 bits(16)</td> | |
| 1143 <td>8e-04<span class="sumN ">()</span></td> | |
| 1144 <td>16/16(100%)</td> | |
| 1145 <td>0/16(0%)</td> | |
| 1146 <td>Plus/Plus</td> | |
| 1147 <td class="aln_frame "></td> | |
| 1148 </tr></tbody></table> | |
| 1149 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1150 </div> | |
| 1151 <div id="ar_557804339_1"> | |
| 1152 <pre>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 1153 |||||||||||||||| | |
| 1154 Sbjct 961 CGTCCGTCGTGAAGAG 976 | |
| 1155 | |
| 1156 | |
| 1157 </pre> | |
| 1158 </div> | |
| 1159 <div id="hd_557804339_2"> | |
| 1160 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804339"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J56_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804339?report=graph&rid=PHWP1JNZ014[557804339]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J56_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | |
| 1161 <span id="hsp557804339_2" class="alnParLinks"> | |
| 1162 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804339" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1163 <a class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804339" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1164 <a class="gbd toolsCtr navBack " href="#hsp557804339_1" title="Go to first match for pdb|3J56|A"><span>First Match</span></a> | |
| 1165 </span> | |
| 1166 </div> | |
| 1167 <table class="alnParams"> | |
| 1168 <caption class="hdnHeader">Alignment statistics for match #2</caption> | |
| 1169 <tbody><tr> | |
| 1170 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1171 </tr> | |
| 1172 <tr> | |
| 1173 <td>16.4 bits(8)</td> | |
| 1174 <td> 47<span class="sumN ">()</span></td> | |
| 1175 <td>8/8(100%)</td> | |
| 1176 <td>0/8(0%)</td> | |
| 1177 <td>Plus/Plus</td> | |
| 1178 <td class="aln_frame "></td> | |
| 1179 </tr></tbody></table> | |
| 1180 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1181 </div> | |
| 1182 <div id="ar_557804339_2"> | |
| 1183 <pre>Query 5 CGTCGTGA 12 | |
| 1184 |||||||| | |
| 1185 Sbjct 2591 CGTCGTGA 2598 | |
| 1186 | |
| 1187 | |
| 1188 </pre> | |
| 1189 </div> | |
| 1190 <div id="hd_557804339_3"> | |
| 1191 <div class="dflLnk hsp"><span class="alnRn"><label>Range 3: 839 to 845</label><span class="" id="rng_557804339"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014&from=839&to=845" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 839 to 845 on 3J56_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804339?report=graph&rid=PHWP1JNZ014[557804339]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=839:845&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J56_A in Nucleotide Graphics for 839 to 845 range">Graphics</a></span></span> | |
| 1192 <span id="hsp557804339_3" class="alnParLinks"> | |
| 1193 <a class="gbd toolsCtr navNext" title="Go to next match #4 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804339" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1194 <a class="gbd toolsCtr navPrev" title="Go to previous match #2 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804339" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1195 <a class="gbd toolsCtr navBack " href="#hsp557804339_1" title="Go to first match for pdb|3J56|A"><span>First Match</span></a> | |
| 1196 </span> | |
| 1197 </div> | |
| 1198 <table class="alnParams"> | |
| 1199 <caption class="hdnHeader">Alignment statistics for match #3</caption> | |
| 1200 <tbody><tr> | |
| 1201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1202 </tr> | |
| 1203 <tr> | |
| 1204 <td>14.4 bits(7)</td> | |
| 1205 <td> 186<span class="sumN ">()</span></td> | |
| 1206 <td>7/7(100%)</td> | |
| 1207 <td>0/7(0%)</td> | |
| 1208 <td>Plus/Plus</td> | |
| 1209 <td class="aln_frame "></td> | |
| 1210 </tr></tbody></table> | |
| 1211 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1212 </div> | |
| 1213 <div id="ar_557804339_3"> | |
| 1214 <pre>Query 7 TCGTGAA 13 | |
| 1215 ||||||| | |
| 1216 Sbjct 839 TCGTGAA 845 | |
| 1217 | |
| 1218 | |
| 1219 </pre> | |
| 1220 </div> | |
| 1221 <div id="hd_557804339_4"> | |
| 1222 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804339"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&log$=nuclalign&blast_rank=3&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J56_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804339?report=graph&rid=PHWP1JNZ014[557804339]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J56_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | |
| 1223 <span id="hsp557804339_4" class="alnParLinks"> | |
| 1224 <a class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804339" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1225 <a class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J56|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804339" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1226 <a class="gbd toolsCtr navBack " href="#hsp557804339_1" title="Go to first match for pdb|3J56|A"><span>First Match</span></a> | |
| 1227 </span> | |
| 1228 </div> | |
| 1229 <table class="alnParams"> | |
| 1230 <caption class="hdnHeader">Alignment statistics for match #4</caption> | |
| 1231 <tbody><tr> | |
| 1232 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1233 </tr> | |
| 1234 <tr> | |
| 1235 <td>14.4 bits(7)</td> | |
| 1236 <td> 186<span class="sumN ">()</span></td> | |
| 1237 <td>7/7(100%)</td> | |
| 1238 <td>0/7(0%)</td> | |
| 1239 <td>Plus/Plus</td> | |
| 1240 <td class="aln_frame "></td> | |
| 1241 </tr></tbody></table> | |
| 1242 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1243 </div> | |
| 1244 <div id="ar_557804339_4"> | |
| 1245 <pre>Query 9 GTGAAGA 15 | |
| 1246 ||||||| | |
| 1247 Sbjct 2027 GTGAAGA 2033 | |
| 1248 | |
| 1249 | |
| 1250 </pre> | |
| 1251 </div> | |
| 1252 </div> <!-- alnAll_557804339 --> | |
| 1253 </div> <!-- aln_557804339 --> | |
| 1254 <div class="alnHdr cnf" id="alnHdr_557804283" seqid="557804283" accs="pdb|3J54|A"> | |
| 1255 <a name="557804283"></a> | |
| 1256 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dlgDwnl_557804283" class="jig-ncbipopper toolsCtr dnld dialog" data-jigconfig="hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'" id="alnDwnld_557804283" title="Download information for pdb|3J54|A"><span>Download</span></a> | |
| 1257 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dlgDwnl_557804283" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | |
| 1258 <div><input seqfsta="gi|557804283" name="dwn_557804283" checked="checked" id="dwFST_557804283" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST_557804283">FASTA (complete sequence)</label></div> | |
| 1259 <div><input seqfsta="gi|557804283" name="dwn_557804283" id="dwFSTAl_557804283" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl_557804283">FASTA (aligned sequences)</label></div> | |
| 1260 <div class=""><input name="dwn_557804283" id="dwGenBank_557804283" getgi="557804283" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class="shownInl" for="dwGenBank_557804283">GenBank (complete sequence)</label></div> | |
| 1261 <div> | |
| 1262 <button class="cfg" id="dw_cont_557804283">Continue</button> | |
| 1263 <button class="cfg cnc">Cancel</button> | |
| 1264 </div> | |
| 1265 </div> <!-- dsDownload --> | |
| 1266 <span class="csLinks" id="csLinks_557804283"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014" class="" target="lnkPHWP1JNZ014" title="Show genbank report for 3J54_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804283?report=graph&rid=PHWP1JNZ014[557804283]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=752:2685&appname=ncbiblast&link_loc=fromSubj" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J54_A in Nucleotide Graphics">Graphics</a></span> | |
| 1267 | |
| 1268 <div class="seqlinks alnDflLn alnSortSeq"><label>Sort by:</label> | |
| 1269 <select id="sa_557804283" onchange="SortHSPAlnSel(event,this)"> | |
| 1270 <option selected="selected" value="0">E value</option> | |
| 1271 <option value="1"> Score</option> | |
| 1272 <option value="3">Percent identity</option> | |
| 1273 <option value="2">Query start position</option> | |
| 1274 <option value="4">Subject start position</option> | |
| 1275 </select> | |
| 1276 </div> | |
| 1277 <span class="alnSeqLinks"> | |
| 1278 <a title="Go to next alignment for pdb|3J52|A" class="gbd toolsCtr navNext" ref="ordinalpos=4&currseq=557804283" id="alnNxt_557804283" onclick="goToNextAlign('dtr_557804283',true);"><span>Next</span></a> | |
| 1279 <a title="Go to previous alignment for pdb|3J56|A" class="gbd toolsCtr navPrev" ref="ordinalpos=4&currseq=557804283" id="alnPrv_557804283" onclick="goToNextAlign('dtr_557804283',false);"><span>Previous</span></a> | |
| 1280 <a class="gbd toolsCtr navBack" title="Go to definition line for pdb|3J54|A" id="alnDsc_557804283" onclick="goToDefLine('dtr_557804283');" href="#dtr_557804283"><span>Descriptions</span></a> | |
| 1281 </span> | |
| 1282 </div> | |
| 1283 <div class="oneSeqAln" id="aln_557804283"> | |
| 1284 <div id="dln_557804283"> | |
| 1285 <div class="dlfRow"> | |
| 1286 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit) | |
| 1287 <div><label>Sequence ID: </label><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014" title="Show report for pdb|3J54|A">pdb|3J54|A</a><span class=" r"><label>Length: </label>2903<label>Number of Matches: </label>4</span></div> | |
| 1288 </div> | |
| 1289 </div> | |
| 1290 <div class="relInf" id="relInf_557804283"><label>Related Information</label></div> | |
| 1291 <!-- | |
| 1292 <pre> | |
| 1293 <@aln_gene_info@> | |
| 1294 </pre> | |
| 1295 --> | |
| 1296 <div class="alnAll" id="alnAll_557804283"><div id="hd_557804283_1"> | |
| 1297 <div class="dflLnk hsp"><span class="alnRn"><label>Range 1: 961 to 976</label><span class="" id="rng_557804283"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014&from=961&to=976" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 961 to 976 on 3J54_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804283?report=graph&rid=PHWP1JNZ014[557804283]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=961:976&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J54_A in Nucleotide Graphics for 961 to 976 range">Graphics</a></span></span> | |
| 1298 <span id="hsp557804283_1" class="alnParLinks"> | |
| 1299 <a class="gbd toolsCtr navNext" title="Go to next match #2 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804283" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1300 <a class="gbd toolsCtr navPrev" disabled="disabled" title="Go to previous match #0 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804283" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1301 <a class="gbd toolsCtr navBack hidden" href="#hsp557804283_1" title="Go to first match for pdb|3J54|A"><span>First Match</span></a> | |
| 1302 </span> | |
| 1303 </div> | |
| 1304 <table class="alnParams"> | |
| 1305 <caption class="hdnHeader">Alignment statistics for match #1</caption> | |
| 1306 <tbody><tr> | |
| 1307 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1308 </tr> | |
| 1309 <tr> | |
| 1310 <td>32.2 bits(16)</td> | |
| 1311 <td>8e-04<span class="sumN ">()</span></td> | |
| 1312 <td>16/16(100%)</td> | |
| 1313 <td>0/16(0%)</td> | |
| 1314 <td>Plus/Plus</td> | |
| 1315 <td class="aln_frame "></td> | |
| 1316 </tr></tbody></table> | |
| 1317 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1318 </div> | |
| 1319 <div id="ar_557804283_1"> | |
| 1320 <pre>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 1321 |||||||||||||||| | |
| 1322 Sbjct 961 CGTCCGTCGTGAAGAG 976 | |
| 1323 | |
| 1324 | |
| 1325 </pre> | |
| 1326 </div> | |
| 1327 <div id="hd_557804283_2"> | |
| 1328 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804283"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J54_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804283?report=graph&rid=PHWP1JNZ014[557804283]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J54_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | |
| 1329 <span id="hsp557804283_2" class="alnParLinks"> | |
| 1330 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804283" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1331 <a class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804283" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1332 <a class="gbd toolsCtr navBack " href="#hsp557804283_1" title="Go to first match for pdb|3J54|A"><span>First Match</span></a> | |
| 1333 </span> | |
| 1334 </div> | |
| 1335 <table class="alnParams"> | |
| 1336 <caption class="hdnHeader">Alignment statistics for match #2</caption> | |
| 1337 <tbody><tr> | |
| 1338 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1339 </tr> | |
| 1340 <tr> | |
| 1341 <td>16.4 bits(8)</td> | |
| 1342 <td> 47<span class="sumN ">()</span></td> | |
| 1343 <td>8/8(100%)</td> | |
| 1344 <td>0/8(0%)</td> | |
| 1345 <td>Plus/Plus</td> | |
| 1346 <td class="aln_frame "></td> | |
| 1347 </tr></tbody></table> | |
| 1348 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1349 </div> | |
| 1350 <div id="ar_557804283_2"> | |
| 1351 <pre>Query 5 CGTCGTGA 12 | |
| 1352 |||||||| | |
| 1353 Sbjct 2591 CGTCGTGA 2598 | |
| 1354 | |
| 1355 | |
| 1356 </pre> | |
| 1357 </div> | |
| 1358 <div id="hd_557804283_3"> | |
| 1359 <div class="dflLnk hsp"><span class="alnRn"><label>Range 3: 839 to 845</label><span class="" id="rng_557804283"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014&from=839&to=845" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 839 to 845 on 3J54_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804283?report=graph&rid=PHWP1JNZ014[557804283]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=839:845&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J54_A in Nucleotide Graphics for 839 to 845 range">Graphics</a></span></span> | |
| 1360 <span id="hsp557804283_3" class="alnParLinks"> | |
| 1361 <a class="gbd toolsCtr navNext" title="Go to next match #4 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804283" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1362 <a class="gbd toolsCtr navPrev" title="Go to previous match #2 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804283" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1363 <a class="gbd toolsCtr navBack " href="#hsp557804283_1" title="Go to first match for pdb|3J54|A"><span>First Match</span></a> | |
| 1364 </span> | |
| 1365 </div> | |
| 1366 <table class="alnParams"> | |
| 1367 <caption class="hdnHeader">Alignment statistics for match #3</caption> | |
| 1368 <tbody><tr> | |
| 1369 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1370 </tr> | |
| 1371 <tr> | |
| 1372 <td>14.4 bits(7)</td> | |
| 1373 <td> 186<span class="sumN ">()</span></td> | |
| 1374 <td>7/7(100%)</td> | |
| 1375 <td>0/7(0%)</td> | |
| 1376 <td>Plus/Plus</td> | |
| 1377 <td class="aln_frame "></td> | |
| 1378 </tr></tbody></table> | |
| 1379 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1380 </div> | |
| 1381 <div id="ar_557804283_3"> | |
| 1382 <pre>Query 7 TCGTGAA 13 | |
| 1383 ||||||| | |
| 1384 Sbjct 839 TCGTGAA 845 | |
| 1385 | |
| 1386 | |
| 1387 </pre> | |
| 1388 </div> | |
| 1389 <div id="hd_557804283_4"> | |
| 1390 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804283"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804283?report=genbank&log$=nuclalign&blast_rank=4&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J54_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804283?report=graph&rid=PHWP1JNZ014[557804283]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J54_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | |
| 1391 <span id="hsp557804283_4" class="alnParLinks"> | |
| 1392 <a class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804283" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1393 <a class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J54|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804283" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1394 <a class="gbd toolsCtr navBack " href="#hsp557804283_1" title="Go to first match for pdb|3J54|A"><span>First Match</span></a> | |
| 1395 </span> | |
| 1396 </div> | |
| 1397 <table class="alnParams"> | |
| 1398 <caption class="hdnHeader">Alignment statistics for match #4</caption> | |
| 1399 <tbody><tr> | |
| 1400 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1401 </tr> | |
| 1402 <tr> | |
| 1403 <td>14.4 bits(7)</td> | |
| 1404 <td> 186<span class="sumN ">()</span></td> | |
| 1405 <td>7/7(100%)</td> | |
| 1406 <td>0/7(0%)</td> | |
| 1407 <td>Plus/Plus</td> | |
| 1408 <td class="aln_frame "></td> | |
| 1409 </tr></tbody></table> | |
| 1410 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1411 </div> | |
| 1412 <div id="ar_557804283_4"> | |
| 1413 <pre>Query 9 GTGAAGA 15 | |
| 1414 ||||||| | |
| 1415 Sbjct 2027 GTGAAGA 2033 | |
| 1416 | |
| 1417 | |
| 1418 </pre> | |
| 1419 </div> | |
| 1420 </div> <!-- alnAll_557804283 --> | |
| 1421 </div> <!-- aln_557804283 --> | |
| 1422 <div class="alnHdr cnf" id="alnHdr_557804227" seqid="557804227" accs="pdb|3J52|A"> | |
| 1423 <a name="557804227"></a> | |
| 1424 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dlgDwnl_557804227" class="jig-ncbipopper toolsCtr dnld dialog" data-jigconfig="hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'" id="alnDwnld_557804227" title="Download information for pdb|3J52|A"><span>Download</span></a> | |
| 1425 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dlgDwnl_557804227" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | |
| 1426 <div><input seqfsta="gi|557804227" name="dwn_557804227" checked="checked" id="dwFST_557804227" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST_557804227">FASTA (complete sequence)</label></div> | |
| 1427 <div><input seqfsta="gi|557804227" name="dwn_557804227" id="dwFSTAl_557804227" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl_557804227">FASTA (aligned sequences)</label></div> | |
| 1428 <div class=""><input name="dwn_557804227" id="dwGenBank_557804227" getgi="557804227" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class="shownInl" for="dwGenBank_557804227">GenBank (complete sequence)</label></div> | |
| 1429 <div> | |
| 1430 <button class="cfg" id="dw_cont_557804227">Continue</button> | |
| 1431 <button class="cfg cnc">Cancel</button> | |
| 1432 </div> | |
| 1433 </div> <!-- dsDownload --> | |
| 1434 <span class="csLinks" id="csLinks_557804227"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014" class="" target="lnkPHWP1JNZ014" title="Show genbank report for 3J52_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804227?report=graph&rid=PHWP1JNZ014[557804227]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=752:2685&appname=ncbiblast&link_loc=fromSubj" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J52_A in Nucleotide Graphics">Graphics</a></span> | |
| 1435 | |
| 1436 <div class="seqlinks alnDflLn alnSortSeq"><label>Sort by:</label> | |
| 1437 <select id="sa_557804227" onchange="SortHSPAlnSel(event,this)"> | |
| 1438 <option selected="selected" value="0">E value</option> | |
| 1439 <option value="1"> Score</option> | |
| 1440 <option value="3">Percent identity</option> | |
| 1441 <option value="2">Query start position</option> | |
| 1442 <option value="4">Subject start position</option> | |
| 1443 </select> | |
| 1444 </div> | |
| 1445 <span class="alnSeqLinks"> | |
| 1446 <a title="Go to next alignment for pdb|3J51|A" class="gbd toolsCtr navNext" ref="ordinalpos=5&currseq=557804227" id="alnNxt_557804227" onclick="goToNextAlign('dtr_557804227',true);"><span>Next</span></a> | |
| 1447 <a title="Go to previous alignment for pdb|3J54|A" class="gbd toolsCtr navPrev" ref="ordinalpos=5&currseq=557804227" id="alnPrv_557804227" onclick="goToNextAlign('dtr_557804227',false);"><span>Previous</span></a> | |
| 1448 <a class="gbd toolsCtr navBack" title="Go to definition line for pdb|3J52|A" id="alnDsc_557804227" onclick="goToDefLine('dtr_557804227');" href="#dtr_557804227"><span>Descriptions</span></a> | |
| 1449 </span> | |
| 1450 </div> | |
| 1451 <div class="oneSeqAln" id="aln_557804227"> | |
| 1452 <div id="dln_557804227"> | |
| 1453 <div class="dlfRow"> | |
| 1454 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit) | |
| 1455 <div><label>Sequence ID: </label><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014" title="Show report for pdb|3J52|A">pdb|3J52|A</a><span class=" r"><label>Length: </label>2903<label>Number of Matches: </label>4</span></div> | |
| 1456 </div> | |
| 1457 </div> | |
| 1458 <div class="relInf" id="relInf_557804227"><label>Related Information</label></div> | |
| 1459 <!-- | |
| 1460 <pre> | |
| 1461 <@aln_gene_info@> | |
| 1462 </pre> | |
| 1463 --> | |
| 1464 <div class="alnAll" id="alnAll_557804227"><div id="hd_557804227_1"> | |
| 1465 <div class="dflLnk hsp"><span class="alnRn"><label>Range 1: 961 to 976</label><span class="" id="rng_557804227"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014&from=961&to=976" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 961 to 976 on 3J52_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804227?report=graph&rid=PHWP1JNZ014[557804227]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=961:976&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J52_A in Nucleotide Graphics for 961 to 976 range">Graphics</a></span></span> | |
| 1466 <span id="hsp557804227_1" class="alnParLinks"> | |
| 1467 <a class="gbd toolsCtr navNext" title="Go to next match #2 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804227" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1468 <a class="gbd toolsCtr navPrev" disabled="disabled" title="Go to previous match #0 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=1&currseq=557804227" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1469 <a class="gbd toolsCtr navBack hidden" href="#hsp557804227_1" title="Go to first match for pdb|3J52|A"><span>First Match</span></a> | |
| 1470 </span> | |
| 1471 </div> | |
| 1472 <table class="alnParams"> | |
| 1473 <caption class="hdnHeader">Alignment statistics for match #1</caption> | |
| 1474 <tbody><tr> | |
| 1475 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1476 </tr> | |
| 1477 <tr> | |
| 1478 <td>32.2 bits(16)</td> | |
| 1479 <td>8e-04<span class="sumN ">()</span></td> | |
| 1480 <td>16/16(100%)</td> | |
| 1481 <td>0/16(0%)</td> | |
| 1482 <td>Plus/Plus</td> | |
| 1483 <td class="aln_frame "></td> | |
| 1484 </tr></tbody></table> | |
| 1485 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1486 </div> | |
| 1487 <div id="ar_557804227_1"> | |
| 1488 <pre>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 1489 |||||||||||||||| | |
| 1490 Sbjct 961 CGTCCGTCGTGAAGAG 976 | |
| 1491 | |
| 1492 | |
| 1493 </pre> | |
| 1494 </div> | |
| 1495 <div id="hd_557804227_2"> | |
| 1496 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804227"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J52_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804227?report=graph&rid=PHWP1JNZ014[557804227]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J52_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | |
| 1497 <span id="hsp557804227_2" class="alnParLinks"> | |
| 1498 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804227" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1499 <a class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804227" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1500 <a class="gbd toolsCtr navBack " href="#hsp557804227_1" title="Go to first match for pdb|3J52|A"><span>First Match</span></a> | |
| 1501 </span> | |
| 1502 </div> | |
| 1503 <table class="alnParams"> | |
| 1504 <caption class="hdnHeader">Alignment statistics for match #2</caption> | |
| 1505 <tbody><tr> | |
| 1506 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1507 </tr> | |
| 1508 <tr> | |
| 1509 <td>16.4 bits(8)</td> | |
| 1510 <td> 47<span class="sumN ">()</span></td> | |
| 1511 <td>8/8(100%)</td> | |
| 1512 <td>0/8(0%)</td> | |
| 1513 <td>Plus/Plus</td> | |
| 1514 <td class="aln_frame "></td> | |
| 1515 </tr></tbody></table> | |
| 1516 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1517 </div> | |
| 1518 <div id="ar_557804227_2"> | |
| 1519 <pre>Query 5 CGTCGTGA 12 | |
| 1520 |||||||| | |
| 1521 Sbjct 2591 CGTCGTGA 2598 | |
| 1522 | |
| 1523 | |
| 1524 </pre> | |
| 1525 </div> | |
| 1526 <div id="hd_557804227_3"> | |
| 1527 <div class="dflLnk hsp"><span class="alnRn"><label>Range 3: 839 to 845</label><span class="" id="rng_557804227"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014&from=839&to=845" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 839 to 845 on 3J52_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804227?report=graph&rid=PHWP1JNZ014[557804227]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=839:845&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J52_A in Nucleotide Graphics for 839 to 845 range">Graphics</a></span></span> | |
| 1528 <span id="hsp557804227_3" class="alnParLinks"> | |
| 1529 <a class="gbd toolsCtr navNext" title="Go to next match #4 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804227" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1530 <a class="gbd toolsCtr navPrev" title="Go to previous match #2 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=3&currseq=557804227" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1531 <a class="gbd toolsCtr navBack " href="#hsp557804227_1" title="Go to first match for pdb|3J52|A"><span>First Match</span></a> | |
| 1532 </span> | |
| 1533 </div> | |
| 1534 <table class="alnParams"> | |
| 1535 <caption class="hdnHeader">Alignment statistics for match #3</caption> | |
| 1536 <tbody><tr> | |
| 1537 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1538 </tr> | |
| 1539 <tr> | |
| 1540 <td>14.4 bits(7)</td> | |
| 1541 <td> 186<span class="sumN ">()</span></td> | |
| 1542 <td>7/7(100%)</td> | |
| 1543 <td>0/7(0%)</td> | |
| 1544 <td>Plus/Plus</td> | |
| 1545 <td class="aln_frame "></td> | |
| 1546 </tr></tbody></table> | |
| 1547 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1548 </div> | |
| 1549 <div id="ar_557804227_3"> | |
| 1550 <pre>Query 7 TCGTGAA 13 | |
| 1551 ||||||| | |
| 1552 Sbjct 839 TCGTGAA 845 | |
| 1553 | |
| 1554 | |
| 1555 </pre> | |
| 1556 </div> | |
| 1557 <div id="hd_557804227_4"> | |
| 1558 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804227"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804227?report=genbank&log$=nuclalign&blast_rank=5&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J52_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804227?report=graph&rid=PHWP1JNZ014[557804227]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J52_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | |
| 1559 <span id="hsp557804227_4" class="alnParLinks"> | |
| 1560 <a class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804227" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | |
| 1561 <a init="on" class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J52|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804227" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | |
| 1562 <a class="gbd toolsCtr navBack " href="#hsp557804227_1" title="Go to first match for pdb|3J52|A"><span>First Match</span></a> | |
| 1563 </span> | |
| 1564 </div> | |
| 1565 <table class="alnParams"> | |
| 1566 <caption class="hdnHeader">Alignment statistics for match #4</caption> | |
| 1567 <tbody><tr> | |
| 1568 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class="aln_frame ">Frame</th> | |
| 1569 </tr> | |
| 1570 <tr> | |
| 1571 <td>14.4 bits(7)</td> | |
| 1572 <td> 186<span class="sumN ">()</span></td> | |
| 1573 <td>7/7(100%)</td> | |
| 1574 <td>0/7(0%)</td> | |
| 1575 <td>Plus/Plus</td> | |
| 1576 <td class="aln_frame "></td> | |
| 1577 </tr></tbody></table> | |
| 1578 <div class="dflLnk aln_feat hidden"><label>Features:</label><div></div></div> | |
| 1579 </div> | |
| 1580 <div id="ar_557804227_4"> | |
| 1581 <pre>Query 9 GTGAAGA 15 | |
| 1582 ||||||| | |
| 1583 Sbjct 2027 GTGAAGA 2033 | |
| 1584 | |
| 1585 | |
| 1586 </pre> | |
| 1587 </div> | |
| 1588 </div> <!-- alnAll_557804227 --> | |
| 1589 </div> <!-- aln_557804227 --> | |
| 1590 </form> | |
| 1591 | |
| 1592 </div></div> | |
| 1593 <pre></pre> | |
| 1594 </div><!--/#alignments--> | |
| 1595 </div><!-- alignInfo --> | |
| 1596 </div><!--ARIA--> | |
| 1597 | |
| 1598 </div><!-- alignView --> | |
| 1599 | |
| 1600 </div><!-- /#content --> | |
| 1601 | |
| 1602 | |
| 1603 | |
| 1604 | |
| 1605 | |
| 1606 </div><!-- /#content-wrap --> | |
| 1607 | |
| 1608 | |
| 1609 | |
| 1610 </div><!--/#wrap--> | |
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