Mercurial > repos > jankanis > blast2html
annotate test-data/blast xml example1.html @ 125:8205546ba86c
merge 844d121d0485 so Tool Shed doesn't see multiple heads
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Tue, 07 Jul 2015 09:28:08 +0200 |
| parents | 591dc9c24824 |
| children |
| rev | line source |
|---|---|
| 32 | 1 <!DOCTYPE html> |
| 2 <html> | |
| 3 <head> | |
| 4 <meta charset="UTF-8"> | |
|
33
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
32
diff
changeset
|
5 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/"> |
| 32 | 6 |
| 7 <title>Blast output</title> | |
| 8 | |
| 9 <style> | |
| 10 body { | |
| 11 color: #333333; | |
| 12 font-family: Arial,Sans-Serif; | |
| 13 } | |
| 14 | |
| 15 :link { | |
| 16 color: #336699; | |
| 17 } | |
| 18 | |
| 19 .right { | |
| 20 float: right; | |
| 21 } | |
| 22 | |
| 23 /* Galaxy with html sanitization enabled strips the header of this html page. If so, show the user a warning.*/ | |
| 24 #strip_html_warning { | |
| 25 display: none; | |
| 26 } | |
| 27 | |
| 28 #content { | |
| 29 margin: 0 2em; | |
| 30 padding: 0.5em; | |
| 31 border: 1px solid #888888; | |
| 32 background-color: #d3dff5; | |
| 33 } | |
| 34 | |
| 35 h1, h2, h3, h4, h5, h6 { | |
| 36 color: #2A6979; | |
| 37 font-family: arial,verdana,sans-serif; | |
| 38 letter-spacing: -1px; | |
| 39 margin: 1.2em 0 0.3em; | |
| 40 } | |
| 41 | |
| 42 h1 { | |
| 114 | 43 font-size: 200%; |
| 32 | 44 } |
| 45 | |
| 46 h2 { | |
| 114 | 47 font-size: 150%; |
| 48 } | |
| 49 | |
| 50 h1, h2 { | |
| 51 border-bottom: 1px solid #CCCCCC; | |
| 52 padding-bottom: 0.1em; | |
| 53 } | |
| 54 | |
| 55 h3 { | |
| 32 | 56 font-size: 120%; |
| 57 font-weight: bold; | |
| 58 } | |
| 59 | |
| 114 | 60 h5.darkHeader { |
| 32 | 61 color: #4D4D4D; |
| 62 letter-spacing: 0; | |
| 63 font-weight: bold; | |
| 114 | 64 font-size: 108%; |
| 32 | 65 } |
| 66 | |
| 67 #nodata { | |
| 68 font-weight: bold; | |
| 69 } | |
| 70 | |
| 71 .index { | |
| 72 margin-bottom: 3em; | |
| 73 } | |
| 74 .index div.indexentry { | |
| 75 margin: 1.2em 1.6em; | |
| 76 font-weight: bold; | |
| 77 font-size: 100%; | |
| 78 } | |
| 79 | |
| 80 .headerdata { | |
| 81 font-size: 90%; | |
| 82 } | |
| 83 .headerdata .param { | |
| 84 font-weight: bold; | |
| 85 text-align: right; | |
| 86 padding: 0 1em; | |
| 87 } | |
| 88 | |
| 89 .grey { | |
| 90 background-color: #eeeeee; | |
| 91 border: 1px solid #cccccc; | |
| 92 padding: 1em; | |
| 93 } | |
| 94 | |
| 95 .white { | |
| 96 background-color: white; | |
| 97 border: 1px solid #cccccc; | |
| 98 padding: 1.5em 2%; | |
| 99 } | |
| 100 | |
| 101 .graphicrow { | |
| 102 clear: left; | |
| 103 width: 100%; | |
| 104 } | |
| 105 | |
| 106 .graphicitem { | |
| 107 float: left; | |
| 108 } | |
| 109 | |
| 110 | |
| 111 | |
| 112 .graphics .grey { | |
| 113 text-align: center; | |
| 114 } | |
| 115 | |
| 116 .graphic { | |
| 117 background-color: white; | |
| 118 border: 2px solid black; | |
| 119 padding: 1.5em; | |
| 120 margin: auto; | |
| 121 } | |
| 122 | |
| 123 .centered, .defline, div.legend, div.tablewrapper { | |
| 124 margin-left: auto; | |
| 125 margin-right: auto; | |
| 126 } | |
| 127 | |
| 128 .defline { | |
| 129 background-color: white; | |
| 130 border: 1px solid black; | |
| 131 margin: .5em auto; | |
| 132 padding-left: .2em; | |
| 133 padding-right: .2em; | |
| 134 max-width: 50em; | |
| 135 text-align: left; | |
| 136 height: 2.8em; | |
| 59 | 137 overflow: hidden; |
| 32 | 138 } |
| 139 | |
| 140 div.legend { | |
| 141 max-width: 40em; | |
| 142 } | |
| 143 div.legend div { | |
| 144 width: 100%; | |
| 145 color: white; | |
| 146 font-weight: bold; | |
| 147 border-spacing: 0; | |
| 148 } | |
| 149 div.legend div .graphicitem { | |
| 150 width: 20%; | |
| 151 padding: 0; | |
| 152 margin: 0; | |
| 153 border: none; | |
| 154 } | |
| 155 | |
| 156 div.tablewrapper { | |
| 157 width: 50%; | |
| 158 min-width: 60em; | |
| 159 } | |
| 160 | |
| 161 /* For small widths we give the graphic 100% */ | |
| 162 @media (max-width: 72.5em) { | |
| 163 div.tablewrapper { | |
| 164 width: 100%; | |
| 165 min-width: 0px; | |
| 166 } | |
| 167 } | |
| 168 | |
| 169 .scale { | |
| 170 width: 100%; | |
| 171 margin: .5em 0; | |
| 172 font-weight: bold; | |
| 173 } | |
| 174 .scale div { | |
| 175 color: red; | |
| 176 text-align: left; | |
| 177 } | |
| 178 .scale .graphicrow { | |
| 179 margin: .5em 0 .5em 0; | |
| 180 color: white; | |
| 181 } | |
| 182 .scale .graphicitem { | |
| 183 position: relative; | |
| 184 } | |
| 185 .scale .graphicitem div { | |
| 186 margin: 0 1px; | |
| 187 padding: 0 2px; | |
| 188 text-align: right; | |
| 189 background-color: red; | |
| 190 color: white; | |
| 191 } | |
| 192 .scale .graphicitem:first-child div { | |
| 193 margin-left: 0px; | |
| 194 } | |
| 195 .scale .graphicitem:last-child div { | |
| 196 margin-right: 0px; | |
| 197 } | |
| 198 .scale .graphicitem .lastlabel { | |
| 199 position: absolute; | |
| 200 top: 0px; | |
| 201 left: 100%; | |
| 202 background-color: transparent; | |
| 203 color: red; | |
| 204 } | |
| 205 | |
| 206 a.matchresult { | |
| 207 display: block; | |
| 208 margin: 0; | |
| 209 padding: 0; | |
| 210 } | |
| 211 div.matchrow { | |
| 212 margin-top: 4px; | |
| 213 } | |
| 214 div.matchrow, div.matchitem { | |
| 215 height: 4px; | |
| 216 } | |
| 217 | |
| 218 | |
| 219 table.descriptiontable { | |
| 220 font-size: 85%; | |
| 221 border: 1px solid #97b0c8; | |
| 222 border-spacing: 0; | |
| 223 color: #222222; | |
| 224 line-height: 1.3em; | |
| 225 background-color: white; | |
| 226 } | |
| 227 table.descriptiontable col:first-child { | |
| 228 width: 100%; | |
| 229 } | |
| 230 table.descriptiontable tr:hover { | |
| 231 background-color: #D5DEE3; | |
| 232 } | |
| 233 table.descriptiontable th { | |
| 234 color: #14376C; | |
| 235 font-weight: normal; | |
| 236 background-color: #F0F0F0; | |
| 237 background: linear-gradient(#FFFFFF, #F0F0F0); | |
| 238 border-bottom: 1px solid #D4DFE9; | |
| 239 border-right: 1px solid #CFCFCF; | |
| 240 border-left: 0px solid black; | |
| 241 border-top: 0px solid black; | |
| 242 } | |
| 243 table.descriptiontable td { | |
| 244 overflow: hidden; | |
| 245 text-align: center; | |
| 246 padding: .4em .8em; | |
| 247 } | |
| 248 table.descriptiontable td div { | |
| 249 width: 1em; | |
| 250 overflow: visible; | |
| 251 white-space: nowrap; | |
| 252 text-align: left; | |
| 253 } | |
| 254 | |
| 255 | |
| 256 | |
| 257 .alignments .white { | |
| 258 padding: 1.5em 1em; | |
| 259 } | |
| 260 | |
| 261 .alignment { | |
| 262 border-top: 1px solid black; | |
| 263 padding-left: 1em; | |
| 264 padding-right: 1em; | |
| 265 } | |
| 266 | |
| 267 div.linkheader { | |
| 268 padding-top: .2em; | |
| 269 font-size: 85%; | |
| 270 color: #14376C; | |
| 271 } | |
| 272 div.linkheader a.linkheader { | |
| 273 margin-right: 1em; | |
| 274 } | |
| 275 div.linkheader .right a { | |
| 276 text-decoration: none; | |
| 277 } | |
| 278 | |
| 279 .title .hittitle { | |
| 280 color: #222222; | |
| 281 margin-bottom: .3em; | |
| 282 } | |
| 283 .title .titleinfo { | |
| 284 font-size: 80%; | |
| 285 margin-top: 0; | |
| 286 margin-bottom: .3em; | |
| 287 } | |
| 288 .title .titleinfo .b { | |
| 289 color: #606060; | |
| 290 font-weight: bold; | |
| 291 font-size: 90%; | |
| 292 } | |
| 293 | |
| 294 .moretitles { | |
| 295 margin: 1.2em; | |
| 296 } | |
| 297 .moretitles .titleinfo { | |
| 298 margin: 0; | |
| 299 padding: 0; | |
| 300 } | |
| 301 .moretitles .hittitle { | |
| 302 margin: .4em 0 .2em 0; | |
| 303 padding: 0; | |
| 304 } | |
| 305 | |
| 306 a.showmoretitles { | |
| 307 font-size: 75%; | |
| 308 color: #336699; | |
| 309 font-weight: bold; | |
| 310 margin-top: 0; | |
| 311 } | |
| 312 a.showmoretitles:hover { | |
| 313 } | |
| 314 | |
| 315 .hotspot { | |
| 316 color: #606060; | |
| 317 font-family: verdana, arial, sans-serif; | |
| 318 margin-bottom: 2.5em; | |
| 319 } | |
| 320 | |
| 321 .hotspot p.range { | |
| 322 font-size: 70%; | |
| 323 margin-top: 0; | |
| 324 margin-top: 1em; | |
| 325 margin-bottom: .2em; | |
| 326 } | |
| 327 .hotspot p.range span.range { | |
| 328 font-weight: bold; | |
| 329 } | |
| 330 .hotspot p.range a.range { | |
| 331 margin-left: .5em; | |
| 332 } | |
| 333 | |
| 334 table.hotspotstable { | |
| 335 border-top: 1px solid; | |
| 336 border-bottom: 1px solid; | |
| 337 text-align: left; | |
| 338 border-collapse: collapse; | |
| 339 } | |
| 340 table.hotspotstable th, table.hotspotstable td { | |
| 341 padding: .1em 1em; | |
| 342 } | |
| 343 table.hotspotstable th { | |
| 344 font-size: 70%; | |
| 345 } | |
| 346 table.hotspotstable td { | |
| 347 min-width: 7em; | |
| 348 color: #222222; | |
| 349 font-size: 80%; | |
| 350 } | |
| 351 | |
| 352 pre.alignmentgraphic { | |
| 353 color: #222222; | |
| 354 } | |
| 355 | |
| 356 footer { | |
| 357 text-align: center; | |
| 358 color: #cccccc; | |
| 359 font-size: 70%; | |
| 360 margin-top: 1em; | |
| 361 } | |
| 362 footer :link { | |
| 363 color: #5588cc; | |
| 364 } | |
| 365 | |
| 366 </style> | |
| 367 | |
| 368 <script type="text/javascript"> | |
| 369 function toggle_visibility(id) { | |
| 370 var e = document.getElementById(id); | |
| 371 if(e.style.display != 'block') | |
| 372 e.style.display = 'block'; | |
| 373 else | |
| 374 e.style.display = 'none'; | |
| 375 } | |
| 376 </script> | |
| 377 | |
| 378 </head> | |
| 379 | |
| 380 | |
| 381 <body> | |
| 382 | |
| 383 <div id="strip_html_warning"> | |
| 384 <!-- This div should be hidden by the header css block. Galaxy | |
| 385 strips all css, breaking this page but making this warning | |
| 386 visible. This warning contains some ugly old skool tabular html | |
| 387 layout that is not stripped. --> | |
| 388 <table bgcolor="#FFE5C9"><tr><td><font color="red"><b> | |
| 389 <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font> | |
| 390 Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy. | |
| 391 </b></font></td></tr></table> | |
| 392 </div> | |
| 393 | |
| 394 <div id=content> | |
| 395 | |
| 114 | 396 <section class=header> |
| 397 | |
| 398 <h1>Nucleotide Blast results</h1> | |
| 399 | |
| 400 <table class=headerdata> | |
| 401 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> | |
| 402 <tr><td class=param>Database:</td><td>pdb</td></tr> | |
| 403 </table> | |
| 404 | |
| 405 </section> | |
| 406 | |
| 32 | 407 |
| 408 | |
| 409 | |
| 410 <section class=match id=match1> | |
| 411 | |
| 114 | 412 <h2>Nucleotide Sequence (16 letters)</h2> |
| 32 | 413 |
| 414 <section class=header> | |
| 415 | |
| 416 <table class=headerdata> | |
| 114 | 417 <tr><td class=param>Query number:</td><td>1</td></tr> |
| 32 | 418 <tr><td class=param>Query ID:</td><td>106397</td></tr> |
| 114 | 419 <tr><td class=param>Definition line:</td><td>No definition line</td></tr> |
| 420 <tr><td class=param>Length:</td><td>16</td></tr> | |
| 32 | 421 </table> |
| 422 | |
| 423 </section> | |
| 424 | |
| 425 | |
| 426 <section class=graphics> | |
| 114 | 427 <h3>Graphic Summary</h3> |
| 32 | 428 |
| 429 <div class=grey> | |
| 114 | 430 <h4 class=centered>Distribution of 1 Blast Hits on the Query Sequence</h4> |
| 32 | 431 |
| 432 <div class=defline id=defline1> | |
| 433 Mouse-over to show defline and scores, click to show alignments | |
| 434 </div> | |
| 435 | |
| 436 <div class=graphic> | |
| 114 | 437 <h5 class=darkHeader>Color key for alignment scores</h5> |
| 32 | 438 <div class=legend><div class=graphicrow> |
| 439 <div class=graphicitem style="background-color: black"><40</div> | |
| 440 <div class=graphicitem style="background-color: blue">40–50</div> | |
| 441 <div class=graphicitem style="background-color: green">50–80</div> | |
| 442 <div class=graphicitem style="background-color: magenta">80–200</div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
443 <div class=graphicitem style="background-color: red">≥200</div> |
| 32 | 444 </div></div> |
| 445 <div style="clear: left"></div> | |
| 446 | |
| 447 <div class=tablewrapper> | |
| 448 | |
| 449 <div class=scale> | |
| 450 <div>query:</div> | |
| 451 <div class=graphicrow> | |
| 452 <div> | |
| 453 <div class=graphicitem style="width: 12.5%"> | |
| 454 <div>2</div> | |
| 455 </div> | |
| 456 <div class=graphicitem style="width: 12.5%"> | |
| 457 <div>4</div> | |
| 458 </div> | |
| 459 <div class=graphicitem style="width: 12.5%"> | |
| 460 <div>6</div> | |
| 461 </div> | |
| 462 <div class=graphicitem style="width: 12.5%"> | |
| 463 <div>8</div> | |
| 464 </div> | |
| 465 <div class=graphicitem style="width: 12.5%"> | |
| 466 <div>10</div> | |
| 467 </div> | |
| 468 <div class=graphicitem style="width: 12.5%"> | |
| 469 <div>12</div> | |
| 470 </div> | |
| 471 <div class=graphicitem style="width: 12.5%"> | |
| 472 <div>14</div> | |
| 473 </div> | |
| 474 <div class=graphicitem style="width: 12.5%"> | |
| 475 <div>16</div> | |
| 476 </div> | |
| 477 </div> | |
| 478 </div> | |
| 479 <div style="clear: left"></div> | |
| 480 </div> | |
| 481 | |
| 482 <a class=matchresult | |
| 59 | 483 href="#hit1-1" |
| 32 | 484 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)"' |
| 485 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 486 title="Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)"> | |
| 487 <div class="matchrow graphicrow"> | |
| 488 <div class="matchitem graphicitem" | |
| 77 | 489 style="background-color: black; width: 100%"></div> |
| 32 | 490 </div> |
| 491 </a> | |
| 492 | |
| 493 <a class=matchresult | |
| 59 | 494 href="#hit1-2" |
| 32 | 495 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)"' |
| 496 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 497 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)"> | |
| 498 <div class="matchrow graphicrow"> | |
| 499 <div class="matchitem graphicitem" | |
| 77 | 500 style="background-color: black; width: 100%"></div> |
| 32 | 501 </div> |
| 502 </a> | |
| 503 | |
| 504 <a class=matchresult | |
| 59 | 505 href="#hit1-3" |
| 32 | 506 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)"' |
| 507 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 508 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)"> | |
| 509 <div class="matchrow graphicrow"> | |
| 510 <div class="matchitem graphicitem" | |
| 77 | 511 style="background-color: black; width: 100%"></div> |
| 32 | 512 </div> |
| 513 </a> | |
| 514 | |
| 515 <a class=matchresult | |
| 59 | 516 href="#hit1-4" |
| 32 | 517 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)"' |
| 518 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 519 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)"> | |
| 520 <div class="matchrow graphicrow"> | |
| 521 <div class="matchitem graphicitem" | |
| 77 | 522 style="background-color: black; width: 100%"></div> |
| 32 | 523 </div> |
| 524 </a> | |
| 525 | |
| 526 <a class=matchresult | |
| 59 | 527 href="#hit1-5" |
| 32 | 528 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)"' |
| 529 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 530 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)"> | |
| 531 <div class="matchrow graphicrow"> | |
| 532 <div class="matchitem graphicitem" | |
| 77 | 533 style="background-color: black; width: 100%"></div> |
| 32 | 534 </div> |
| 535 </a> | |
| 536 | |
| 537 <a class=matchresult | |
| 59 | 538 href="#hit1-6" |
| 32 | 539 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)"' |
| 540 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 541 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)"> | |
| 542 <div class="matchrow graphicrow"> | |
| 543 <div class="matchitem graphicitem" | |
| 77 | 544 style="background-color: black; width: 100%"></div> |
| 32 | 545 </div> |
| 546 </a> | |
| 547 | |
| 548 <a class=matchresult | |
| 59 | 549 href="#hit1-7" |
| 32 | 550 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)"' |
| 551 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 552 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)"> | |
| 553 <div class="matchrow graphicrow"> | |
| 554 <div class="matchitem graphicitem" | |
| 77 | 555 style="background-color: black; width: 100%"></div> |
| 32 | 556 </div> |
| 557 </a> | |
| 558 | |
| 559 <a class=matchresult | |
| 59 | 560 href="#hit1-8" |
| 32 | 561 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)"' |
| 562 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 563 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)"> | |
| 564 <div class="matchrow graphicrow"> | |
| 565 <div class="matchitem graphicitem" | |
| 77 | 566 style="background-color: black; width: 100%"></div> |
| 32 | 567 </div> |
| 568 </a> | |
| 569 | |
| 570 <a class=matchresult | |
| 59 | 571 href="#hit1-9" |
| 32 | 572 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)"' |
| 573 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 574 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)"> | |
| 575 <div class="matchrow graphicrow"> | |
| 576 <div class="matchitem graphicitem" | |
| 77 | 577 style="background-color: black; width: 100%"></div> |
| 32 | 578 </div> |
| 579 </a> | |
| 580 | |
| 581 <a class=matchresult | |
| 59 | 582 href="#hit1-10" |
| 32 | 583 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)"' |
| 584 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 585 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)"> | |
| 586 <div class="matchrow graphicrow"> | |
| 587 <div class="matchitem graphicitem" | |
| 77 | 588 style="background-color: black; width: 100%"></div> |
| 32 | 589 </div> |
| 590 </a> | |
| 591 | |
| 592 <a class=matchresult | |
| 59 | 593 href="#hit1-11" |
| 32 | 594 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)"' |
| 595 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 596 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)"> | |
| 597 <div class="matchrow graphicrow"> | |
| 598 <div class="matchitem graphicitem" | |
| 77 | 599 style="background-color: black; width: 100%"></div> |
| 32 | 600 </div> |
| 601 </a> | |
| 602 | |
| 603 <a class=matchresult | |
| 59 | 604 href="#hit1-12" |
| 32 | 605 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)"' |
| 606 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 607 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)"> | |
| 608 <div class="matchrow graphicrow"> | |
| 609 <div class="matchitem graphicitem" | |
| 77 | 610 style="background-color: black; width: 100%"></div> |
| 32 | 611 </div> |
| 612 </a> | |
| 613 | |
| 614 <a class=matchresult | |
| 59 | 615 href="#hit1-13" |
| 32 | 616 onmouseover='document.getElementById("defline1").innerHTML="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)"' |
| 617 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 618 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)"> | |
| 619 <div class="matchrow graphicrow"> | |
| 620 <div class="matchitem graphicitem" | |
| 77 | 621 style="background-color: black; width: 100%"></div> |
| 32 | 622 </div> |
| 623 </a> | |
| 624 | |
| 625 <a class=matchresult | |
| 59 | 626 href="#hit1-14" |
| 32 | 627 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome"' |
| 628 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 629 title="Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome"> | |
| 630 <div class="matchrow graphicrow"> | |
| 631 <div class="matchitem graphicitem" | |
| 77 | 632 style="background-color: black; width: 100%"></div> |
| 32 | 633 </div> |
| 634 </a> | |
| 635 | |
| 636 <a class=matchresult | |
| 59 | 637 href="#hit1-15" |
| 32 | 638 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. "' |
| 639 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 640 title="Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. "> | |
| 641 <div class="matchrow graphicrow"> | |
| 642 <div class="matchitem graphicitem" | |
| 77 | 643 style="background-color: black; width: 100%"></div> |
| 32 | 644 </div> |
| 645 </a> | |
| 646 | |
| 647 <a class=matchresult | |
| 59 | 648 href="#hit1-16" |
| 32 | 649 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. "' |
| 650 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 651 title="Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. "> | |
| 652 <div class="matchrow graphicrow"> | |
| 653 <div class="matchitem graphicitem" | |
| 77 | 654 style="background-color: black; width: 100%"></div> |
| 32 | 655 </div> |
| 656 </a> | |
| 657 | |
| 658 <a class=matchresult | |
| 59 | 659 href="#hit1-17" |
| 32 | 660 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State "' |
| 661 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 662 title="Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State "> | |
| 663 <div class="matchrow graphicrow"> | |
| 664 <div class="matchitem graphicitem" | |
| 77 | 665 style="background-color: black; width: 100%"></div> |
| 32 | 666 </div> |
| 667 </a> | |
| 668 | |
| 669 <a class=matchresult | |
| 59 | 670 href="#hit1-18" |
| 32 | 671 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143"' |
| 672 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 673 title="Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143"> | |
| 674 <div class="matchrow graphicrow"> | |
| 675 <div class="matchitem graphicitem" | |
| 77 | 676 style="background-color: black; width: 100%"></div> |
| 32 | 677 </div> |
| 678 </a> | |
| 679 | |
| 680 <a class=matchresult | |
| 59 | 681 href="#hit1-19" |
| 32 | 682 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056"' |
| 683 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 684 title="Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056"> | |
| 685 <div class="matchrow graphicrow"> | |
| 686 <div class="matchitem graphicitem" | |
| 77 | 687 style="background-color: black; width: 100%"></div> |
| 32 | 688 </div> |
| 689 </a> | |
| 690 | |
| 691 <a class=matchresult | |
| 59 | 692 href="#hit1-20" |
| 32 | 693 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400."' |
| 694 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 695 title="Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400."> | |
| 696 <div class="matchrow graphicrow"> | |
| 697 <div class="matchitem graphicitem" | |
| 77 | 698 style="background-color: black; width: 100%"></div> |
| 32 | 699 </div> |
| 700 </a> | |
| 701 | |
| 702 <a class=matchresult | |
| 59 | 703 href="#hit1-21" |
| 32 | 704 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "' |
| 705 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 706 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "> | |
| 707 <div class="matchrow graphicrow"> | |
| 708 <div class="matchitem graphicitem" | |
| 77 | 709 style="background-color: black; width: 100%"></div> |
| 32 | 710 </div> |
| 711 </a> | |
| 712 | |
| 713 <a class=matchresult | |
| 59 | 714 href="#hit1-22" |
| 32 | 715 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "' |
| 716 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 717 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "> | |
| 718 <div class="matchrow graphicrow"> | |
| 719 <div class="matchitem graphicitem" | |
| 77 | 720 style="background-color: black; width: 100%"></div> |
| 32 | 721 </div> |
| 722 </a> | |
| 723 | |
| 724 <a class=matchresult | |
| 59 | 725 href="#hit1-23" |
| 32 | 726 onmouseover='document.getElementById("defline1").innerHTML="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "' |
| 727 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 728 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. "> | |
| 729 <div class="matchrow graphicrow"> | |
| 730 <div class="matchitem graphicitem" | |
| 77 | 731 style="background-color: black; width: 100%"></div> |
| 32 | 732 </div> |
| 733 </a> | |
| 734 | |
| 735 <a class=matchresult | |
| 59 | 736 href="#hit1-24" |
| 32 | 737 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome "' |
| 738 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 739 title="Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome "> | |
| 740 <div class="matchrow graphicrow"> | |
| 741 <div class="matchitem graphicitem" | |
| 77 | 742 style="background-color: black; width: 100%"></div> |
| 32 | 743 </div> |
| 744 </a> | |
| 745 | |
| 746 <a class=matchresult | |
| 59 | 747 href="#hit1-25" |
| 32 | 748 onmouseover='document.getElementById("defline1").innerHTML="Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution"' |
| 749 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 750 title="Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution"> | |
| 751 <div class="matchrow graphicrow"> | |
| 752 <div class="matchitem graphicitem" | |
| 753 style="background-color: black; width: 81.25%"></div> | |
| 754 <div class="matchitem graphicitem" | |
| 755 style="background-color: transparent; width: 18.75%"></div> | |
| 756 </div> | |
| 757 </a> | |
| 758 | |
| 759 <a class=matchresult | |
| 59 | 760 href="#hit1-26" |
| 32 | 761 onmouseover='document.getElementById("defline1").innerHTML="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome"' |
| 762 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 763 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome"> | |
| 764 <div class="matchrow graphicrow"> | |
| 765 <div class="matchitem graphicitem" | |
| 766 style="background-color: transparent; width: 6.25%"></div> | |
| 767 <div class="matchitem graphicitem" | |
| 768 style="background-color: black; width: 87.5%"></div> | |
| 769 <div class="matchitem graphicitem" | |
| 770 style="background-color: transparent; width: 6.25%"></div> | |
| 771 </div> | |
| 772 </a> | |
| 773 | |
| 774 <a class=matchresult | |
| 59 | 775 href="#hit1-27" |
| 32 | 776 onmouseover='document.getElementById("defline1").innerHTML="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"' |
| 777 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 778 title="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"> | |
| 779 <div class="matchrow graphicrow"> | |
| 780 <div class="matchitem graphicitem" | |
| 781 style="background-color: transparent; width: 43.75%"></div> | |
| 782 <div class="matchitem graphicitem" | |
| 783 style="background-color: black; width: 56.25%"></div> | |
| 784 </div> | |
| 785 </a> | |
| 786 | |
| 787 <a class=matchresult | |
| 59 | 788 href="#hit1-28" |
| 32 | 789 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"' |
| 790 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 791 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"> | |
| 792 <div class="matchrow graphicrow"> | |
| 793 <div class="matchitem graphicitem" | |
| 794 style="background-color: transparent; width: 18.75%"></div> | |
| 795 <div class="matchitem graphicitem" | |
| 796 style="background-color: black; width: 81.25%"></div> | |
| 797 </div> | |
| 798 </a> | |
| 799 | |
| 800 <a class=matchresult | |
| 59 | 801 href="#hit1-29" |
| 32 | 802 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"' |
| 803 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 804 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"> | |
| 805 <div class="matchrow graphicrow"> | |
| 806 <div class="matchitem graphicitem" | |
| 807 style="background-color: transparent; width: 18.75%"></div> | |
| 808 <div class="matchitem graphicitem" | |
| 809 style="background-color: black; width: 81.25%"></div> | |
| 810 </div> | |
| 811 </a> | |
| 812 | |
| 813 <a class=matchresult | |
|
119
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
814 href="#hit1-30" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
815 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"' |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
816 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
817 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
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changeset
|
818 <div class="matchrow graphicrow"> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
819 <div class="matchitem graphicitem" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
820 style="background-color: black; width: 81.25%"></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
821 <div class="matchitem graphicitem" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
822 style="background-color: transparent; width: 18.75%"></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
823 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
824 </a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
825 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
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|
826 <a class=matchresult |
| 59 | 827 href="#hit1-31" |
| 32 | 828 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"' |
| 829 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 830 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"> | |
| 831 <div class="matchrow graphicrow"> | |
| 832 <div class="matchitem graphicitem" | |
| 833 style="background-color: transparent; width: 18.75%"></div> | |
| 834 <div class="matchitem graphicitem" | |
| 77 | 835 style="background-color: black; width: 75%"></div> |
| 32 | 836 <div class="matchitem graphicitem" |
| 837 style="background-color: transparent; width: 6.25%"></div> | |
| 838 </div> | |
| 839 </a> | |
| 840 | |
| 841 <a class=matchresult | |
| 59 | 842 href="#hit1-32" |
| 32 | 843 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The H. Sapiens 60s Rrna"' |
| 844 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 845 title="Chain 5, Structure Of The H. Sapiens 60s Rrna"> | |
| 846 <div class="matchrow graphicrow"> | |
| 847 <div class="matchitem graphicitem" | |
| 77 | 848 style="background-color: black; width: 100%"></div> |
| 32 | 849 </div> |
| 850 </a> | |
| 851 | |
| 852 <a class=matchresult | |
| 59 | 853 href="#hit1-33" |
| 32 | 854 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The D. Melanogaster 60s Rrna"' |
| 855 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 856 title="Chain 5, Structure Of The D. Melanogaster 60s Rrna"> | |
| 857 <div class="matchrow graphicrow"> | |
| 858 <div class="matchitem graphicitem" | |
| 77 | 859 style="background-color: black; width: 100%"></div> |
| 32 | 860 </div> |
| 861 </a> | |
| 862 | |
| 863 <a class=matchresult | |
| 59 | 864 href="#hit1-34" |
| 32 | 865 onmouseover='document.getElementById("defline1").innerHTML="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"' |
| 866 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 867 title="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"> | |
| 868 <div class="matchrow graphicrow"> | |
| 869 <div class="matchitem graphicitem" | |
| 870 style="background-color: transparent; width: 18.75%"></div> | |
| 871 <div class="matchitem graphicitem" | |
| 872 style="background-color: black; width: 81.25%"></div> | |
| 873 </div> | |
| 874 </a> | |
| 875 | |
| 876 <a class=matchresult | |
|
119
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
877 href="#hit1-35" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
878 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)"' |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
879 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
880 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)"> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
881 <div class="matchrow graphicrow"> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
882 <div class="matchitem graphicitem" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
883 style="background-color: black; width: 81.25%"></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
884 <div class="matchitem graphicitem" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
885 style="background-color: transparent; width: 18.75%"></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
886 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
887 </a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
888 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
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changeset
|
889 <a class=matchresult |
| 59 | 890 href="#hit1-36" |
| 32 | 891 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit"' |
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| 32 | 901 </div> |
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| 904 <a class=matchresult | |
| 59 | 905 href="#hit1-37" |
| 32 | 906 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6"' |
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| 59 | 920 href="#hit1-38" |
| 32 | 921 onmouseover='document.getElementById("defline1").innerHTML="Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B"' |
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| 932 <a class=matchresult | |
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| 59 | 946 href="#hit1-40" |
| 32 | 947 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4."' |
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| 949 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4."> | |
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| 32 | 955 <div class="matchitem graphicitem" |
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| 960 <a class=matchresult | |
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| 32 | 962 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1"' |
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| 964 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1"> | |
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| 77 | 969 style="background-color: black; width: 75%"></div> |
| 32 | 970 <div class="matchitem graphicitem" |
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| 972 </div> | |
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| 974 | |
| 975 <a class=matchresult | |
| 59 | 976 href="#hit1-42" |
| 32 | 977 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. "' |
| 978 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 979 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. "> | |
| 980 <div class="matchrow graphicrow"> | |
| 981 <div class="matchitem graphicitem" | |
| 982 style="background-color: transparent; width: 18.75%"></div> | |
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| 77 | 984 style="background-color: black; width: 75%"></div> |
| 32 | 985 <div class="matchitem graphicitem" |
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| 989 | |
| 990 <a class=matchresult | |
| 59 | 991 href="#hit1-43" |
| 32 | 992 onmouseover='document.getElementById("defline1").innerHTML="Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1"' |
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| 994 title="Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1"> | |
| 995 <div class="matchrow graphicrow"> | |
| 996 <div class="matchitem graphicitem" | |
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| 999 style="background-color: black; width: 56.25%"></div> | |
| 1000 <div class="matchitem graphicitem" | |
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| 32 | 1002 </div> |
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| 1009 title="Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2"> | |
| 1010 <div class="matchrow graphicrow"> | |
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| 1012 style="background-color: transparent; width: 18.75%"></div> | |
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| 77 | 1016 style="background-color: transparent; width: 25%"></div> |
| 32 | 1017 </div> |
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| 1019 | |
| 1020 <a class=matchresult | |
| 59 | 1021 href="#hit1-45" |
| 32 | 1022 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. "' |
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| 1024 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. "> | |
| 1025 <div class="matchrow graphicrow"> | |
| 1026 <div class="matchitem graphicitem" | |
| 1027 style="background-color: transparent; width: 18.75%"></div> | |
| 1028 <div class="matchitem graphicitem" | |
| 1029 style="background-color: black; width: 81.25%"></div> | |
| 1030 </div> | |
| 1031 </a> | |
| 1032 | |
| 1033 <a class=matchresult | |
| 59 | 1034 href="#hit1-46" |
| 32 | 1035 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. "' |
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| 1037 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. "> | |
| 1038 <div class="matchrow graphicrow"> | |
| 1039 <div class="matchitem graphicitem" | |
| 1040 style="background-color: transparent; width: 18.75%"></div> | |
| 1041 <div class="matchitem graphicitem" | |
| 1042 style="background-color: black; width: 81.25%"></div> | |
| 1043 </div> | |
| 1044 </a> | |
| 1045 | |
| 1046 <a class=matchresult | |
| 59 | 1047 href="#hit1-47" |
| 32 | 1048 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit."' |
| 1049 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1050 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit."> | |
| 1051 <div class="matchrow graphicrow"> | |
| 1052 <div class="matchitem graphicitem" | |
| 1053 style="background-color: transparent; width: 12.5%"></div> | |
| 1054 <div class="matchitem graphicitem" | |
| 1055 style="background-color: black; width: 87.5%"></div> | |
| 1056 </div> | |
| 1057 </a> | |
| 1058 | |
| 1059 <a class=matchresult | |
| 59 | 1060 href="#hit1-48" |
| 32 | 1061 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit."' |
| 1062 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1063 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit."> | |
| 1064 <div class="matchrow graphicrow"> | |
| 1065 <div class="matchitem graphicitem" | |
| 1066 style="background-color: transparent; width: 12.5%"></div> | |
| 1067 <div class="matchitem graphicitem" | |
| 1068 style="background-color: black; width: 87.5%"></div> | |
| 1069 </div> | |
| 1070 </a> | |
| 1071 | |
| 1072 <a class=matchresult | |
| 59 | 1073 href="#hit1-49" |
| 32 | 1074 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)"' |
| 1075 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1076 title="Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)"> | |
| 1077 <div class="matchrow graphicrow"> | |
| 1078 <div class="matchitem graphicitem" | |
| 1079 style="background-color: transparent; width: 18.75%"></div> | |
| 1080 <div class="matchitem graphicitem" | |
| 1081 style="background-color: black; width: 81.25%"></div> | |
| 1082 </div> | |
| 1083 </a> | |
| 1084 | |
| 1085 <a class=matchresult | |
| 59 | 1086 href="#hit1-50" |
| 32 | 1087 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome"' |
| 1088 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1089 title="Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome"> | |
| 1090 <div class="matchrow graphicrow"> | |
| 1091 <div class="matchitem graphicitem" | |
| 1092 style="background-color: transparent; width: 12.5%"></div> | |
| 1093 <div class="matchitem graphicitem" | |
| 1094 style="background-color: black; width: 87.5%"></div> | |
| 1095 </div> | |
| 1096 </a> | |
| 1097 | |
| 1098 <a class=matchresult | |
| 59 | 1099 href="#hit1-51" |
| 32 | 1100 onmouseover='document.getElementById("defline1").innerHTML="Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"' |
| 1101 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1102 title="Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"> | |
| 1103 <div class="matchrow graphicrow"> | |
| 1104 <div class="matchitem graphicitem" | |
| 1105 style="background-color: transparent; width: 18.75%"></div> | |
| 1106 <div class="matchitem graphicitem" | |
| 1107 style="background-color: black; width: 56.25%"></div> | |
| 1108 <div class="matchitem graphicitem" | |
| 77 | 1109 style="background-color: transparent; width: 25%"></div> |
| 32 | 1110 </div> |
| 1111 </a> | |
| 1112 | |
| 1113 <a class=matchresult | |
| 59 | 1114 href="#hit1-52" |
| 32 | 1115 onmouseover='document.getElementById("defline1").innerHTML="Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"' |
| 1116 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1117 title="Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"> | |
| 1118 <div class="matchrow graphicrow"> | |
| 1119 <div class="matchitem graphicitem" | |
| 1120 style="background-color: transparent; width: 18.75%"></div> | |
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| 1122 style="background-color: black; width: 56.25%"></div> | |
| 1123 <div class="matchitem graphicitem" | |
| 77 | 1124 style="background-color: transparent; width: 25%"></div> |
| 32 | 1125 </div> |
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| 1127 | |
| 1128 <a class=matchresult | |
| 59 | 1129 href="#hit1-53" |
| 32 | 1130 onmouseover='document.getElementById("defline1").innerHTML="Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"' |
| 1131 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1132 title="Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"> | |
| 1133 <div class="matchrow graphicrow"> | |
| 1134 <div class="matchitem graphicitem" | |
| 1135 style="background-color: transparent; width: 18.75%"></div> | |
| 1136 <div class="matchitem graphicitem" | |
| 1137 style="background-color: black; width: 56.25%"></div> | |
| 1138 <div class="matchitem graphicitem" | |
| 77 | 1139 style="background-color: transparent; width: 25%"></div> |
| 32 | 1140 </div> |
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| 1143 <a class=matchresult | |
| 59 | 1144 href="#hit1-54" |
| 32 | 1145 onmouseover='document.getElementById("defline1").innerHTML="Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"' |
| 1146 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1147 title="Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)"> | |
| 1148 <div class="matchrow graphicrow"> | |
| 1149 <div class="matchitem graphicitem" | |
| 1150 style="background-color: transparent; width: 18.75%"></div> | |
| 1151 <div class="matchitem graphicitem" | |
| 1152 style="background-color: black; width: 56.25%"></div> | |
| 1153 <div class="matchitem graphicitem" | |
| 77 | 1154 style="background-color: transparent; width: 25%"></div> |
| 32 | 1155 </div> |
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| 1157 | |
| 1158 <a class=matchresult | |
| 59 | 1159 href="#hit1-55" |
| 32 | 1160 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit"' |
| 1161 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1162 title="Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit"> | |
| 1163 <div class="matchrow graphicrow"> | |
| 1164 <div class="matchitem graphicitem" | |
| 1165 style="background-color: transparent; width: 18.75%"></div> | |
| 1166 <div class="matchitem graphicitem" | |
| 77 | 1167 style="background-color: black; width: 75%"></div> |
| 32 | 1168 <div class="matchitem graphicitem" |
| 1169 style="background-color: transparent; width: 6.25%"></div> | |
| 1170 </div> | |
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| 1172 | |
| 1173 <a class=matchresult | |
| 59 | 1174 href="#hit1-56" |
| 32 | 1175 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution"' |
| 1176 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1177 title="Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution"> | |
| 1178 <div class="matchrow graphicrow"> | |
| 1179 <div class="matchitem graphicitem" | |
| 1180 style="background-color: transparent; width: 18.75%"></div> | |
| 1181 <div class="matchitem graphicitem" | |
| 1182 style="background-color: black; width: 81.25%"></div> | |
| 1183 </div> | |
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| 1185 | |
| 1186 <a class=matchresult | |
| 59 | 1187 href="#hit1-57" |
| 32 | 1188 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution"' |
| 1189 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1190 title="Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution"> | |
| 1191 <div class="matchrow graphicrow"> | |
| 1192 <div class="matchitem graphicitem" | |
| 1193 style="background-color: transparent; width: 12.5%"></div> | |
| 1194 <div class="matchitem graphicitem" | |
| 1195 style="background-color: black; width: 87.5%"></div> | |
| 1196 </div> | |
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| 1198 | |
| 1199 <a class=matchresult | |
| 59 | 1200 href="#hit1-58" |
| 32 | 1201 onmouseover='document.getElementById("defline1").innerHTML="Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h."' |
| 1202 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1203 title="Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h."> | |
| 1204 <div class="matchrow graphicrow"> | |
| 1205 <div class="matchitem graphicitem" | |
| 1206 style="background-color: transparent; width: 18.75%"></div> | |
| 1207 <div class="matchitem graphicitem" | |
| 1208 style="background-color: black; width: 56.25%"></div> | |
| 1209 <div class="matchitem graphicitem" | |
| 77 | 1210 style="background-color: transparent; width: 25%"></div> |
| 32 | 1211 </div> |
| 1212 </a> | |
| 1213 | |
| 1214 <a class=matchresult | |
| 59 | 1215 href="#hit1-59" |
| 32 | 1216 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit"' |
| 1217 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1218 title="Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit"> | |
| 1219 <div class="matchrow graphicrow"> | |
| 1220 <div class="matchitem graphicitem" | |
| 1221 style="background-color: transparent; width: 18.75%"></div> | |
| 1222 <div class="matchitem graphicitem" | |
| 1223 style="background-color: black; width: 56.25%"></div> | |
| 1224 <div class="matchitem graphicitem" | |
| 77 | 1225 style="background-color: transparent; width: 25%"></div> |
| 32 | 1226 </div> |
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| 1228 | |
| 1229 <a class=matchresult | |
| 59 | 1230 href="#hit1-60" |
| 32 | 1231 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui"' |
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| 1233 title="Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui"> | |
| 1234 <div class="matchrow graphicrow"> | |
| 1235 <div class="matchitem graphicitem" | |
| 1236 style="background-color: transparent; width: 18.75%"></div> | |
| 1237 <div class="matchitem graphicitem" | |
| 1238 style="background-color: black; width: 56.25%"></div> | |
| 1239 <div class="matchitem graphicitem" | |
| 77 | 1240 style="background-color: transparent; width: 25%"></div> |
| 32 | 1241 </div> |
| 1242 </a> | |
| 1243 | |
| 1244 <a class=matchresult | |
| 59 | 1245 href="#hit1-61" |
| 32 | 1246 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a "' |
| 1247 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1248 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a "> | |
| 1249 <div class="matchrow graphicrow"> | |
| 1250 <div class="matchitem graphicitem" | |
| 1251 style="background-color: transparent; width: 18.75%"></div> | |
| 1252 <div class="matchitem graphicitem" | |
| 77 | 1253 style="background-color: black; width: 75%"></div> |
| 32 | 1254 <div class="matchitem graphicitem" |
| 1255 style="background-color: transparent; width: 6.25%"></div> | |
| 1256 </div> | |
| 1257 </a> | |
| 1258 | |
| 1259 <a class=matchresult | |
| 59 | 1260 href="#hit1-62" |
| 32 | 1261 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c"' |
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| 1263 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c"> | |
| 1264 <div class="matchrow graphicrow"> | |
| 1265 <div class="matchitem graphicitem" | |
| 1266 style="background-color: transparent; width: 18.75%"></div> | |
| 1267 <div class="matchitem graphicitem" | |
| 77 | 1268 style="background-color: black; width: 75%"></div> |
| 32 | 1269 <div class="matchitem graphicitem" |
| 1270 style="background-color: transparent; width: 6.25%"></div> | |
| 1271 </div> | |
| 1272 </a> | |
| 1273 | |
| 1274 <a class=matchresult | |
| 59 | 1275 href="#hit1-63" |
| 32 | 1276 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a"' |
| 1277 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1278 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a"> | |
| 1279 <div class="matchrow graphicrow"> | |
| 1280 <div class="matchitem graphicitem" | |
| 1281 style="background-color: transparent; width: 18.75%"></div> | |
| 1282 <div class="matchitem graphicitem" | |
| 77 | 1283 style="background-color: black; width: 75%"></div> |
| 32 | 1284 <div class="matchitem graphicitem" |
| 1285 style="background-color: transparent; width: 6.25%"></div> | |
| 1286 </div> | |
| 1287 </a> | |
| 1288 | |
| 1289 <a class=matchresult | |
| 59 | 1290 href="#hit1-64" |
| 32 | 1291 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model."' |
| 1292 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1293 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model."> | |
| 1294 <div class="matchrow graphicrow"> | |
| 1295 <div class="matchitem graphicitem" | |
| 1296 style="background-color: transparent; width: 18.75%"></div> | |
| 1297 <div class="matchitem graphicitem" | |
| 77 | 1298 style="background-color: black; width: 75%"></div> |
| 32 | 1299 <div class="matchitem graphicitem" |
| 1300 style="background-color: transparent; width: 6.25%"></div> | |
| 1301 </div> | |
| 1302 </a> | |
| 1303 | |
| 1304 <a class=matchresult | |
| 59 | 1305 href="#hit1-65" |
| 32 | 1306 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u"' |
| 1307 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1308 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u"> | |
| 1309 <div class="matchrow graphicrow"> | |
| 1310 <div class="matchitem graphicitem" | |
| 1311 style="background-color: transparent; width: 18.75%"></div> | |
| 1312 <div class="matchitem graphicitem" | |
| 77 | 1313 style="background-color: black; width: 75%"></div> |
| 32 | 1314 <div class="matchitem graphicitem" |
| 1315 style="background-color: transparent; width: 6.25%"></div> | |
| 1316 </div> | |
| 1317 </a> | |
| 1318 | |
| 1319 <a class=matchresult | |
| 59 | 1320 href="#hit1-66" |
| 32 | 1321 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u"' |
| 1322 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1323 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u"> | |
| 1324 <div class="matchrow graphicrow"> | |
| 1325 <div class="matchitem graphicitem" | |
| 1326 style="background-color: transparent; width: 18.75%"></div> | |
| 1327 <div class="matchitem graphicitem" | |
| 77 | 1328 style="background-color: black; width: 75%"></div> |
| 32 | 1329 <div class="matchitem graphicitem" |
| 1330 style="background-color: transparent; width: 6.25%"></div> | |
| 1331 </div> | |
| 1332 </a> | |
| 1333 | |
| 1334 <a class=matchresult | |
| 59 | 1335 href="#hit1-67" |
| 32 | 1336 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model."' |
| 1337 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1338 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model."> | |
| 1339 <div class="matchrow graphicrow"> | |
| 1340 <div class="matchitem graphicitem" | |
| 1341 style="background-color: transparent; width: 18.75%"></div> | |
| 1342 <div class="matchitem graphicitem" | |
| 77 | 1343 style="background-color: black; width: 75%"></div> |
| 32 | 1344 <div class="matchitem graphicitem" |
| 1345 style="background-color: transparent; width: 6.25%"></div> | |
| 1346 </div> | |
| 1347 </a> | |
| 1348 | |
| 1349 <a class=matchresult | |
| 59 | 1350 href="#hit1-68" |
| 32 | 1351 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u"' |
| 1352 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1353 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u"> | |
| 1354 <div class="matchrow graphicrow"> | |
| 1355 <div class="matchitem graphicitem" | |
| 1356 style="background-color: transparent; width: 18.75%"></div> | |
| 1357 <div class="matchitem graphicitem" | |
| 77 | 1358 style="background-color: black; width: 75%"></div> |
| 32 | 1359 <div class="matchitem graphicitem" |
| 1360 style="background-color: transparent; width: 6.25%"></div> | |
| 1361 </div> | |
| 1362 </a> | |
| 1363 | |
| 1364 <a class=matchresult | |
| 59 | 1365 href="#hit1-69" |
| 32 | 1366 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a"' |
| 1367 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1368 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a"> | |
| 1369 <div class="matchrow graphicrow"> | |
| 1370 <div class="matchitem graphicitem" | |
| 1371 style="background-color: transparent; width: 18.75%"></div> | |
| 1372 <div class="matchitem graphicitem" | |
| 77 | 1373 style="background-color: black; width: 75%"></div> |
| 32 | 1374 <div class="matchitem graphicitem" |
| 1375 style="background-color: transparent; width: 6.25%"></div> | |
| 1376 </div> | |
| 1377 </a> | |
| 1378 | |
| 1379 <a class=matchresult | |
| 59 | 1380 href="#hit1-70" |
| 32 | 1381 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u"' |
| 1382 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1383 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u"> | |
| 1384 <div class="matchrow graphicrow"> | |
| 1385 <div class="matchitem graphicitem" | |
| 1386 style="background-color: transparent; width: 18.75%"></div> | |
| 1387 <div class="matchitem graphicitem" | |
| 77 | 1388 style="background-color: black; width: 75%"></div> |
| 32 | 1389 <div class="matchitem graphicitem" |
| 1390 style="background-color: transparent; width: 6.25%"></div> | |
| 1391 </div> | |
| 1392 </a> | |
| 1393 | |
| 1394 <a class=matchresult | |
| 59 | 1395 href="#hit1-71" |
| 32 | 1396 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins "' |
| 1397 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1398 title="Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins "> | |
| 1399 <div class="matchrow graphicrow"> | |
| 1400 <div class="matchitem graphicitem" | |
| 1401 style="background-color: transparent; width: 18.75%"></div> | |
| 1402 <div class="matchitem graphicitem" | |
| 77 | 1403 style="background-color: black; width: 75%"></div> |
| 32 | 1404 <div class="matchitem graphicitem" |
| 1405 style="background-color: transparent; width: 6.25%"></div> | |
| 1406 </div> | |
| 1407 </a> | |
| 1408 | |
| 1409 <a class=matchresult | |
| 59 | 1410 href="#hit1-72" |
| 32 | 1411 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map"' |
| 1412 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1413 title="Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map"> | |
| 1414 <div class="matchrow graphicrow"> | |
| 1415 <div class="matchitem graphicitem" | |
| 1416 style="background-color: transparent; width: 18.75%"></div> | |
| 1417 <div class="matchitem graphicitem" | |
| 1418 style="background-color: black; width: 81.25%"></div> | |
| 1419 </div> | |
| 1420 </a> | |
| 1421 | |
| 1422 <a class=matchresult | |
| 59 | 1423 href="#hit1-73" |
| 32 | 1424 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit"' |
| 1425 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1426 title="Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit"> | |
| 1427 <div class="matchrow graphicrow"> | |
| 1428 <div class="matchitem graphicitem" | |
| 1429 style="background-color: transparent; width: 18.75%"></div> | |
| 1430 <div class="matchitem graphicitem" | |
| 1431 style="background-color: black; width: 56.25%"></div> | |
| 1432 <div class="matchitem graphicitem" | |
| 77 | 1433 style="background-color: transparent; width: 25%"></div> |
| 32 | 1434 </div> |
| 1435 </a> | |
| 1436 | |
| 1437 <a class=matchresult | |
| 59 | 1438 href="#hit1-74" |
| 32 | 1439 onmouseover='document.getElementById("defline1").innerHTML="Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome"' |
| 1440 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1441 title="Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome"> | |
| 1442 <div class="matchrow graphicrow"> | |
| 1443 <div class="matchitem graphicitem" | |
| 1444 style="background-color: transparent; width: 43.75%"></div> | |
| 1445 <div class="matchitem graphicitem" | |
| 1446 style="background-color: black; width: 56.25%"></div> | |
| 1447 </div> | |
| 1448 </a> | |
| 1449 | |
| 1450 <a class=matchresult | |
| 59 | 1451 href="#hit1-75" |
| 32 | 1452 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution "' |
| 1453 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1454 title="Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution "> | |
| 1455 <div class="matchrow graphicrow"> | |
| 1456 <div class="matchitem graphicitem" | |
| 1457 style="background-color: transparent; width: 18.75%"></div> | |
| 1458 <div class="matchitem graphicitem" | |
| 1459 style="background-color: black; width: 56.25%"></div> | |
| 1460 <div class="matchitem graphicitem" | |
| 77 | 1461 style="background-color: transparent; width: 25%"></div> |
| 32 | 1462 </div> |
| 1463 </a> | |
| 1464 | |
| 1465 <a class=matchresult | |
| 59 | 1466 href="#hit1-76" |
| 32 | 1467 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui "' |
| 1468 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1469 title="Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui "> | |
| 1470 <div class="matchrow graphicrow"> | |
| 1471 <div class="matchitem graphicitem" | |
| 1472 style="background-color: transparent; width: 18.75%"></div> | |
| 1473 <div class="matchitem graphicitem" | |
| 77 | 1474 style="background-color: black; width: 75%"></div> |
| 32 | 1475 <div class="matchitem graphicitem" |
| 1476 style="background-color: transparent; width: 6.25%"></div> | |
| 1477 </div> | |
| 1478 </a> | |
| 1479 | |
| 1480 <a class=matchresult | |
| 59 | 1481 href="#hit1-77" |
| 32 | 1482 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui "' |
| 1483 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1484 title="Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui "> | |
| 1485 <div class="matchrow graphicrow"> | |
| 1486 <div class="matchitem graphicitem" | |
| 1487 style="background-color: transparent; width: 18.75%"></div> | |
| 1488 <div class="matchitem graphicitem" | |
| 77 | 1489 style="background-color: black; width: 75%"></div> |
| 32 | 1490 <div class="matchitem graphicitem" |
| 1491 style="background-color: transparent; width: 6.25%"></div> | |
| 1492 </div> | |
| 1493 </a> | |
| 1494 | |
| 1495 <a class=matchresult | |
| 59 | 1496 href="#hit1-78" |
| 32 | 1497 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui"' |
| 1498 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1499 title="Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui"> | |
| 1500 <div class="matchrow graphicrow"> | |
| 1501 <div class="matchitem graphicitem" | |
| 1502 style="background-color: transparent; width: 18.75%"></div> | |
| 1503 <div class="matchitem graphicitem" | |
| 77 | 1504 style="background-color: black; width: 75%"></div> |
| 32 | 1505 <div class="matchitem graphicitem" |
| 1506 style="background-color: transparent; width: 6.25%"></div> | |
| 1507 </div> | |
| 1508 </a> | |
| 1509 | |
| 1510 <a class=matchresult | |
| 59 | 1511 href="#hit1-79" |
| 32 | 1512 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit."' |
| 1513 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1514 title="Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit."> | |
| 1515 <div class="matchrow graphicrow"> | |
| 1516 <div class="matchitem graphicitem" | |
| 1517 style="background-color: transparent; width: 18.75%"></div> | |
| 1518 <div class="matchitem graphicitem" | |
| 1519 style="background-color: black; width: 56.25%"></div> | |
| 1520 <div class="matchitem graphicitem" | |
| 77 | 1521 style="background-color: transparent; width: 25%"></div> |
| 32 | 1522 </div> |
| 1523 </a> | |
| 1524 | |
| 1525 <a class=matchresult | |
| 59 | 1526 href="#hit1-80" |
| 32 | 1527 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution "' |
| 1528 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1529 title="Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution "> | |
| 1530 <div class="matchrow graphicrow"> | |
| 1531 <div class="matchitem graphicitem" | |
| 1532 style="background-color: transparent; width: 18.75%"></div> | |
| 1533 <div class="matchitem graphicitem" | |
| 1534 style="background-color: black; width: 56.25%"></div> | |
| 1535 <div class="matchitem graphicitem" | |
| 77 | 1536 style="background-color: transparent; width: 25%"></div> |
| 32 | 1537 </div> |
| 1538 </a> | |
| 1539 | |
| 1540 <a class=matchresult | |
| 59 | 1541 href="#hit1-81" |
| 32 | 1542 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit"' |
| 1543 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1544 title="Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit"> | |
| 1545 <div class="matchrow graphicrow"> | |
| 1546 <div class="matchitem graphicitem" | |
| 1547 style="background-color: transparent; width: 18.75%"></div> | |
| 1548 <div class="matchitem graphicitem" | |
| 1549 style="background-color: black; width: 56.25%"></div> | |
| 1550 <div class="matchitem graphicitem" | |
| 77 | 1551 style="background-color: transparent; width: 25%"></div> |
| 32 | 1552 </div> |
| 1553 </a> | |
| 1554 | |
| 1555 <a class=matchresult | |
| 59 | 1556 href="#hit1-82" |
| 32 | 1557 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution"' |
| 1558 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1559 title="Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution"> | |
| 1560 <div class="matchrow graphicrow"> | |
| 1561 <div class="matchitem graphicitem" | |
| 1562 style="background-color: transparent; width: 18.75%"></div> | |
| 1563 <div class="matchitem graphicitem" | |
| 1564 style="background-color: black; width: 56.25%"></div> | |
| 1565 <div class="matchitem graphicitem" | |
| 77 | 1566 style="background-color: transparent; width: 25%"></div> |
| 32 | 1567 </div> |
| 1568 </a> | |
| 1569 | |
| 1570 <a class=matchresult | |
| 59 | 1571 href="#hit1-83" |
| 32 | 1572 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound"' |
| 1573 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1574 title="Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound"> | |
| 1575 <div class="matchrow graphicrow"> | |
| 1576 <div class="matchitem graphicitem" | |
| 1577 style="background-color: transparent; width: 18.75%"></div> | |
| 1578 <div class="matchitem graphicitem" | |
| 1579 style="background-color: black; width: 56.25%"></div> | |
| 1580 <div class="matchitem graphicitem" | |
| 77 | 1581 style="background-color: transparent; width: 25%"></div> |
| 32 | 1582 </div> |
| 1583 </a> | |
| 1584 | |
| 1585 <a class=matchresult | |
| 59 | 1586 href="#hit1-84" |
| 32 | 1587 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin"' |
| 1588 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1589 title="Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin"> | |
| 1590 <div class="matchrow graphicrow"> | |
| 1591 <div class="matchitem graphicitem" | |
| 1592 style="background-color: transparent; width: 18.75%"></div> | |
| 1593 <div class="matchitem graphicitem" | |
| 1594 style="background-color: black; width: 56.25%"></div> | |
| 1595 <div class="matchitem graphicitem" | |
| 77 | 1596 style="background-color: transparent; width: 25%"></div> |
| 32 | 1597 </div> |
| 1598 </a> | |
| 1599 | |
| 1600 <a class=matchresult | |
| 59 | 1601 href="#hit1-85" |
| 32 | 1602 onmouseover='document.getElementById("defline1").innerHTML="Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate"' |
| 1603 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1604 title="Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate"> | |
| 1605 <div class="matchrow graphicrow"> | |
| 1606 <div class="matchitem graphicitem" | |
| 77 | 1607 style="background-color: transparent; width: 25%"></div> |
| 1608 <div class="matchitem graphicitem" | |
| 1609 style="background-color: black; width: 50%"></div> | |
| 1610 <div class="matchitem graphicitem" | |
| 1611 style="background-color: transparent; width: 25%"></div> | |
| 32 | 1612 </div> |
| 1613 </a> | |
| 1614 | |
| 1615 <a class=matchresult | |
| 59 | 1616 href="#hit1-86" |
| 32 | 1617 onmouseover='document.getElementById("defline1").innerHTML="Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate"' |
| 1618 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1619 title="Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate"> | |
| 1620 <div class="matchrow graphicrow"> | |
| 1621 <div class="matchitem graphicitem" | |
| 77 | 1622 style="background-color: transparent; width: 25%"></div> |
| 1623 <div class="matchitem graphicitem" | |
| 1624 style="background-color: black; width: 50%"></div> | |
| 1625 <div class="matchitem graphicitem" | |
| 1626 style="background-color: transparent; width: 25%"></div> | |
| 32 | 1627 </div> |
| 1628 </a> | |
| 1629 | |
| 1630 <a class=matchresult | |
| 59 | 1631 href="#hit1-87" |
| 32 | 1632 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Thermus Thermophilus Ribosome"' |
| 1633 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1634 title="Chain A, Thermus Thermophilus Ribosome"> | |
| 1635 <div class="matchrow graphicrow"> | |
| 1636 <div class="matchitem graphicitem" | |
| 77 | 1637 style="background-color: transparent; width: 25%"></div> |
| 32 | 1638 <div class="matchitem graphicitem" |
| 1639 style="background-color: black; width: 68.75%"></div> | |
| 1640 <div class="matchitem graphicitem" | |
| 1641 style="background-color: transparent; width: 6.25%"></div> | |
| 1642 </div> | |
| 1643 </a> | |
| 1644 | |
| 1645 <a class=matchresult | |
| 59 | 1646 href="#hit1-88" |
| 32 | 1647 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. "' |
| 1648 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1649 title="Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. "> | |
| 1650 <div class="matchrow graphicrow"> | |
| 1651 <div class="matchitem graphicitem" | |
| 77 | 1652 style="background-color: transparent; width: 25%"></div> |
| 32 | 1653 <div class="matchitem graphicitem" |
| 1654 style="background-color: black; width: 68.75%"></div> | |
| 1655 <div class="matchitem graphicitem" | |
| 1656 style="background-color: transparent; width: 6.25%"></div> | |
| 1657 </div> | |
| 1658 </a> | |
| 1659 | |
| 1660 <a class=matchresult | |
| 59 | 1661 href="#hit1-89" |
| 32 | 1662 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit "' |
| 1663 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1664 title="Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit "> | |
| 1665 <div class="matchrow graphicrow"> | |
| 1666 <div class="matchitem graphicitem" | |
| 77 | 1667 style="background-color: transparent; width: 25%"></div> |
| 32 | 1668 <div class="matchitem graphicitem" |
| 1669 style="background-color: black; width: 68.75%"></div> | |
| 1670 <div class="matchitem graphicitem" | |
| 1671 style="background-color: transparent; width: 6.25%"></div> | |
| 1672 </div> | |
| 1673 </a> | |
| 1674 | |
| 1675 <a class=matchresult | |
| 59 | 1676 href="#hit1-90" |
| 32 | 1677 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine"' |
| 1678 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1679 title="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine"> | |
| 1680 <div class="matchrow graphicrow"> | |
| 1681 <div class="matchitem graphicitem" | |
| 77 | 1682 style="background-color: transparent; width: 25%"></div> |
| 32 | 1683 <div class="matchitem graphicitem" |
| 1684 style="background-color: black; width: 68.75%"></div> | |
| 1685 <div class="matchitem graphicitem" | |
| 1686 style="background-color: transparent; width: 6.25%"></div> | |
| 1687 </div> | |
| 1688 </a> | |
| 1689 | |
| 1690 <a class=matchresult | |
| 59 | 1691 href="#hit1-91" |
| 32 | 1692 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine"' |
| 1693 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1694 title="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine"> | |
| 1695 <div class="matchrow graphicrow"> | |
| 1696 <div class="matchitem graphicitem" | |
| 77 | 1697 style="background-color: transparent; width: 25%"></div> |
| 32 | 1698 <div class="matchitem graphicitem" |
| 1699 style="background-color: black; width: 68.75%"></div> | |
| 1700 <div class="matchitem graphicitem" | |
| 1701 style="background-color: transparent; width: 6.25%"></div> | |
| 1702 </div> | |
| 1703 </a> | |
| 1704 | |
| 1705 <a class=matchresult | |
| 59 | 1706 href="#hit1-92" |
| 32 | 1707 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)"' |
| 1708 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1709 title="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)"> | |
| 1710 <div class="matchrow graphicrow"> | |
| 1711 <div class="matchitem graphicitem" | |
| 1712 style="background-color: transparent; width: 12.5%"></div> | |
| 1713 <div class="matchitem graphicitem" | |
| 1714 style="background-color: black; width: 87.5%"></div> | |
| 1715 </div> | |
| 1716 </a> | |
| 1717 | |
| 1718 <a class=matchresult | |
| 59 | 1719 href="#hit1-93" |
| 32 | 1720 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)"' |
| 1721 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1722 title="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)"> | |
| 1723 <div class="matchrow graphicrow"> | |
| 1724 <div class="matchitem graphicitem" | |
| 1725 style="background-color: transparent; width: 12.5%"></div> | |
| 1726 <div class="matchitem graphicitem" | |
| 1727 style="background-color: black; width: 87.5%"></div> | |
| 1728 </div> | |
| 1729 </a> | |
| 1730 | |
| 1731 <a class=matchresult | |
| 59 | 1732 href="#hit1-94" |
| 32 | 1733 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit"' |
| 1734 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1735 title="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit"> | |
| 1736 <div class="matchrow graphicrow"> | |
| 1737 <div class="matchitem graphicitem" | |
| 77 | 1738 style="background-color: transparent; width: 25%"></div> |
| 32 | 1739 <div class="matchitem graphicitem" |
| 1740 style="background-color: black; width: 68.75%"></div> | |
| 1741 <div class="matchitem graphicitem" | |
| 1742 style="background-color: transparent; width: 6.25%"></div> | |
| 1743 </div> | |
| 1744 </a> | |
| 1745 | |
| 1746 <a class=matchresult | |
| 59 | 1747 href="#hit1-95" |
| 32 | 1748 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit"' |
| 1749 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1750 title="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit"> | |
| 1751 <div class="matchrow graphicrow"> | |
| 1752 <div class="matchitem graphicitem" | |
| 77 | 1753 style="background-color: transparent; width: 25%"></div> |
| 32 | 1754 <div class="matchitem graphicitem" |
| 1755 style="background-color: black; width: 68.75%"></div> | |
| 1756 <div class="matchitem graphicitem" | |
| 1757 style="background-color: transparent; width: 6.25%"></div> | |
| 1758 </div> | |
| 1759 </a> | |
| 1760 | |
| 1761 <a class=matchresult | |
| 59 | 1762 href="#hit1-96" |
| 32 | 1763 onmouseover='document.getElementById("defline1").innerHTML="Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object"' |
| 1764 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1765 title="Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object"> | |
| 1766 <div class="matchrow graphicrow"> | |
| 1767 <div class="matchitem graphicitem" | |
| 77 | 1768 style="background-color: transparent; width: 25%"></div> |
| 1769 <div class="matchitem graphicitem" | |
| 1770 style="background-color: black; width: 50%"></div> | |
| 1771 <div class="matchitem graphicitem" | |
| 1772 style="background-color: transparent; width: 25%"></div> | |
| 32 | 1773 </div> |
| 1774 </a> | |
| 1775 | |
| 1776 <a class=matchresult | |
| 59 | 1777 href="#hit1-97" |
| 32 | 1778 onmouseover='document.getElementById("defline1").innerHTML="Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object"' |
| 1779 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1780 title="Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object"> | |
| 1781 <div class="matchrow graphicrow"> | |
| 1782 <div class="matchitem graphicitem" | |
| 1783 style="background-color: transparent; width: 18.75%"></div> | |
| 1784 <div class="matchitem graphicitem" | |
| 1785 style="background-color: black; width: 56.25%"></div> | |
| 1786 <div class="matchitem graphicitem" | |
| 77 | 1787 style="background-color: transparent; width: 25%"></div> |
| 32 | 1788 </div> |
| 1789 </a> | |
| 1790 | |
| 1791 <a class=matchresult | |
| 59 | 1792 href="#hit1-98" |
| 32 | 1793 onmouseover='document.getElementById("defline1").innerHTML="Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. "' |
| 1794 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1795 title="Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. "> | |
| 1796 <div class="matchrow graphicrow"> | |
| 1797 <div class="matchitem graphicitem" | |
| 77 | 1798 style="background-color: transparent; width: 25%"></div> |
| 32 | 1799 <div class="matchitem graphicitem" |
| 1800 style="background-color: black; width: 68.75%"></div> | |
| 1801 <div class="matchitem graphicitem" | |
| 1802 style="background-color: transparent; width: 6.25%"></div> | |
| 1803 </div> | |
| 1804 </a> | |
| 1805 | |
| 1806 <a class=matchresult | |
| 59 | 1807 href="#hit1-99" |
| 32 | 1808 onmouseover='document.getElementById("defline1").innerHTML="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium"' |
| 1809 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1810 title="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium"> | |
| 1811 <div class="matchrow graphicrow"> | |
| 1812 <div class="matchitem graphicitem" | |
| 77 | 1813 style="background-color: transparent; width: 25%"></div> |
| 1814 <div class="matchitem graphicitem" | |
| 1815 style="background-color: black; width: 50%"></div> | |
| 1816 <div class="matchitem graphicitem" | |
| 1817 style="background-color: transparent; width: 25%"></div> | |
| 32 | 1818 </div> |
| 1819 </a> | |
| 1820 | |
| 1821 <a class=matchresult | |
| 59 | 1822 href="#hit1-100" |
| 32 | 1823 onmouseover='document.getElementById("defline1").innerHTML="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium"' |
| 1824 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 1825 title="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium"> | |
| 1826 <div class="matchrow graphicrow"> | |
| 1827 <div class="matchitem graphicitem" | |
| 77 | 1828 style="background-color: transparent; width: 25%"></div> |
| 1829 <div class="matchitem graphicitem" | |
| 1830 style="background-color: black; width: 50%"></div> | |
| 1831 <div class="matchitem graphicitem" | |
| 1832 style="background-color: transparent; width: 25%"></div> | |
| 32 | 1833 </div> |
| 1834 </a> | |
| 1835 | |
| 1836 </div> | |
| 1837 </div> | |
| 1838 </div> | |
| 1839 </section> | |
| 1840 | |
| 1841 | |
| 1842 | |
| 1843 <section class=descriptions> | |
| 114 | 1844 <h3>Descriptions</h3> |
| 32 | 1845 |
| 1846 <div class=grey><div class=white> | |
| 114 | 1847 <h5 class=darkHeader>Sequences producing significant alignments:</h5> |
| 32 | 1848 |
| 1849 <table class=descriptiontable> | |
| 1850 <col/><col/><col/><col/><col/><col/><col/> | |
| 1851 <tr> | |
| 1852 <th>Description</th> | |
| 1853 <th>Max score</th> | |
| 1854 <th>Total score</th> | |
| 1855 <th>Query cover</th> | |
| 1856 <th>E value</th> | |
| 1857 <th>Ident</th> | |
| 1858 <th>Accession</th> | |
| 1859 </tr> | |
| 1860 <tr> | |
| 59 | 1861 <td><div><a href="#hit1-1" |
| 32 | 1862 title="Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)" |
| 59 | 1863 id="description1-1"> |
| 32 | 1864 Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit) |
| 1865 </a></div></td> | |
| 1866 <td>32.2</td> | |
| 1867 <td>77.3</td> | |
| 1868 <td>100%</td> | |
| 1869 <td>0.0007913</td> | |
| 1870 <td>100%</td> | |
|
118
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1871 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5K_A?report=genbank&log$=nuclalign">3J5K_A</a></td> |
| 32 | 1872 </tr> |
| 1873 <tr> | |
| 59 | 1874 <td><div><a href="#hit1-2" |
| 32 | 1875 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)" |
| 59 | 1876 id="description1-2"> |
| 32 | 1877 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit) |
| 1878 </a></div></td> | |
| 1879 <td>32.2</td> | |
| 1880 <td>77.3</td> | |
| 1881 <td>100%</td> | |
| 1882 <td>0.0007913</td> | |
| 1883 <td>100%</td> | |
|
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1884 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5I_A?report=genbank&log$=nuclalign">3J5I_A</a></td> |
| 32 | 1885 </tr> |
| 1886 <tr> | |
| 59 | 1887 <td><div><a href="#hit1-3" |
| 32 | 1888 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)" |
| 59 | 1889 id="description1-3"> |
| 32 | 1890 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit) |
| 1891 </a></div></td> | |
| 1892 <td>32.2</td> | |
| 1893 <td>77.3</td> | |
| 1894 <td>100%</td> | |
| 1895 <td>0.0007913</td> | |
| 1896 <td>100%</td> | |
|
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1897 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5G_A?report=genbank&log$=nuclalign">3J5G_A</a></td> |
| 32 | 1898 </tr> |
| 1899 <tr> | |
| 59 | 1900 <td><div><a href="#hit1-4" |
| 32 | 1901 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)" |
| 59 | 1902 id="description1-4"> |
| 32 | 1903 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit) |
| 1904 </a></div></td> | |
| 1905 <td>32.2</td> | |
| 1906 <td>77.3</td> | |
| 1907 <td>100%</td> | |
| 1908 <td>0.0007913</td> | |
| 1909 <td>100%</td> | |
|
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1910 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5E_A?report=genbank&log$=nuclalign">3J5E_A</a></td> |
| 32 | 1911 </tr> |
| 1912 <tr> | |
| 59 | 1913 <td><div><a href="#hit1-5" |
| 32 | 1914 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)" |
| 59 | 1915 id="description1-5"> |
| 32 | 1916 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit) |
| 1917 </a></div></td> | |
| 1918 <td>32.2</td> | |
| 1919 <td>77.3</td> | |
| 1920 <td>100%</td> | |
| 1921 <td>0.0007913</td> | |
| 1922 <td>100%</td> | |
|
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1923 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5C_A?report=genbank&log$=nuclalign">3J5C_A</a></td> |
| 32 | 1924 </tr> |
| 1925 <tr> | |
| 59 | 1926 <td><div><a href="#hit1-6" |
| 32 | 1927 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)" |
| 59 | 1928 id="description1-6"> |
| 32 | 1929 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit) |
| 1930 </a></div></td> | |
| 1931 <td>32.2</td> | |
| 1932 <td>77.3</td> | |
| 1933 <td>100%</td> | |
| 1934 <td>0.0007913</td> | |
| 1935 <td>100%</td> | |
|
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parents:
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|
1936 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5A_A?report=genbank&log$=nuclalign">3J5A_A</a></td> |
| 32 | 1937 </tr> |
| 1938 <tr> | |
| 59 | 1939 <td><div><a href="#hit1-7" |
| 32 | 1940 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)" |
| 59 | 1941 id="description1-7"> |
| 32 | 1942 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit) |
| 1943 </a></div></td> | |
| 1944 <td>32.2</td> | |
| 1945 <td>77.3</td> | |
| 1946 <td>100%</td> | |
| 1947 <td>0.0007913</td> | |
| 1948 <td>100%</td> | |
|
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parents:
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|
1949 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J58_A?report=genbank&log$=nuclalign">3J58_A</a></td> |
| 32 | 1950 </tr> |
| 1951 <tr> | |
| 59 | 1952 <td><div><a href="#hit1-8" |
| 32 | 1953 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)" |
| 59 | 1954 id="description1-8"> |
| 32 | 1955 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit) |
| 1956 </a></div></td> | |
| 1957 <td>32.2</td> | |
| 1958 <td>77.3</td> | |
| 1959 <td>100%</td> | |
| 1960 <td>0.0007913</td> | |
| 1961 <td>100%</td> | |
|
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parents:
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changeset
|
1962 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J56_A?report=genbank&log$=nuclalign">3J56_A</a></td> |
| 32 | 1963 </tr> |
| 1964 <tr> | |
| 59 | 1965 <td><div><a href="#hit1-9" |
| 32 | 1966 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)" |
| 59 | 1967 id="description1-9"> |
| 32 | 1968 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit) |
| 1969 </a></div></td> | |
| 1970 <td>32.2</td> | |
| 1971 <td>77.3</td> | |
| 1972 <td>100%</td> | |
| 1973 <td>0.0007913</td> | |
| 1974 <td>100%</td> | |
|
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|
1975 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J54_A?report=genbank&log$=nuclalign">3J54_A</a></td> |
| 32 | 1976 </tr> |
| 1977 <tr> | |
| 59 | 1978 <td><div><a href="#hit1-10" |
| 32 | 1979 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)" |
| 59 | 1980 id="description1-10"> |
| 32 | 1981 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit) |
| 1982 </a></div></td> | |
| 1983 <td>32.2</td> | |
| 1984 <td>77.3</td> | |
| 1985 <td>100%</td> | |
| 1986 <td>0.0007913</td> | |
| 1987 <td>100%</td> | |
|
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|
1988 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J52_A?report=genbank&log$=nuclalign">3J52_A</a></td> |
| 32 | 1989 </tr> |
| 1990 <tr> | |
| 59 | 1991 <td><div><a href="#hit1-11" |
| 32 | 1992 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)" |
| 59 | 1993 id="description1-11"> |
| 32 | 1994 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit) |
| 1995 </a></div></td> | |
| 1996 <td>32.2</td> | |
| 1997 <td>77.3</td> | |
| 1998 <td>100%</td> | |
| 1999 <td>0.0007913</td> | |
| 2000 <td>100%</td> | |
|
118
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|
2001 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J51_A?report=genbank&log$=nuclalign">3J51_A</a></td> |
| 32 | 2002 </tr> |
| 2003 <tr> | |
| 59 | 2004 <td><div><a href="#hit1-12" |
| 32 | 2005 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)" |
| 59 | 2006 id="description1-12"> |
| 32 | 2007 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit) |
| 2008 </a></div></td> | |
| 2009 <td>32.2</td> | |
| 2010 <td>77.3</td> | |
| 2011 <td>100%</td> | |
| 2012 <td>0.0007913</td> | |
| 2013 <td>100%</td> | |
|
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|
2014 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J50_A?report=genbank&log$=nuclalign">3J50_A</a></td> |
| 32 | 2015 </tr> |
| 2016 <tr> | |
| 59 | 2017 <td><div><a href="#hit1-13" |
| 32 | 2018 title="Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)" |
| 59 | 2019 id="description1-13"> |
| 32 | 2020 Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit) |
| 2021 </a></div></td> | |
| 2022 <td>32.2</td> | |
| 2023 <td>77.3</td> | |
| 2024 <td>100%</td> | |
| 2025 <td>0.0007913</td> | |
| 2026 <td>100%</td> | |
|
118
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|
2027 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J4X_A?report=genbank&log$=nuclalign">3J4X_A</a></td> |
| 32 | 2028 </tr> |
| 2029 <tr> | |
| 59 | 2030 <td><div><a href="#hit1-14" |
| 32 | 2031 title="Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome" |
| 59 | 2032 id="description1-14"> |
| 32 | 2033 Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome |
| 2034 </a></div></td> | |
| 2035 <td>32.2</td> | |
| 2036 <td>62.9</td> | |
| 2037 <td>100%</td> | |
| 2038 <td>0.0007913</td> | |
| 2039 <td>100%</td> | |
|
118
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|
2040 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J37_A?report=genbank&log$=nuclalign">3J37_A</a></td> |
| 32 | 2041 </tr> |
| 2042 <tr> | |
| 59 | 2043 <td><div><a href="#hit1-15" |
| 32 | 2044 title="Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. " |
| 59 | 2045 id="description1-15"> |
| 32 | 2046 Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. |
| 2047 </a></div></td> | |
| 2048 <td>32.2</td> | |
| 2049 <td>62.9</td> | |
| 2050 <td>100%</td> | |
| 2051 <td>0.0007913</td> | |
| 2052 <td>100%</td> | |
|
118
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|
2053 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZT_B?report=genbank&log$=nuclalign">3IZT_B</a></td> |
| 32 | 2054 </tr> |
| 2055 <tr> | |
| 59 | 2056 <td><div><a href="#hit1-16" |
| 32 | 2057 title="Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. " |
| 59 | 2058 id="description1-16"> |
| 32 | 2059 Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. |
| 2060 </a></div></td> | |
| 2061 <td>32.2</td> | |
| 2062 <td>77.3</td> | |
| 2063 <td>100%</td> | |
| 2064 <td>0.0007913</td> | |
| 2065 <td>100%</td> | |
|
118
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|
2066 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3FIK_B?report=genbank&log$=nuclalign">3FIK_B</a></td> |
| 32 | 2067 </tr> |
| 2068 <tr> | |
| 59 | 2069 <td><div><a href="#hit1-17" |
| 32 | 2070 title="Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State " |
| 59 | 2071 id="description1-17"> |
| 32 | 2072 Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State |
| 2073 </a></div></td> | |
| 2074 <td>32.2</td> | |
| 2075 <td>77.3</td> | |
| 2076 <td>100%</td> | |
| 2077 <td>0.0007913</td> | |
| 2078 <td>100%</td> | |
|
118
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|
2079 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3E1B_B?report=genbank&log$=nuclalign">3E1B_B</a></td> |
| 32 | 2080 </tr> |
| 2081 <tr> | |
| 59 | 2082 <td><div><a href="#hit1-18" |
| 32 | 2083 title="Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143" |
| 59 | 2084 id="description1-18"> |
| 32 | 2085 Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 |
| 2086 </a></div></td> | |
| 2087 <td>32.2</td> | |
| 2088 <td>77.3</td> | |
| 2089 <td>100%</td> | |
| 2090 <td>0.0007913</td> | |
| 2091 <td>100%</td> | |
|
118
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114
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changeset
|
2092 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYC_0?report=genbank&log$=nuclalign">2GYC_0</a></td> |
| 32 | 2093 </tr> |
| 2094 <tr> | |
| 59 | 2095 <td><div><a href="#hit1-19" |
| 32 | 2096 title="Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056" |
| 59 | 2097 id="description1-19"> |
| 32 | 2098 Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 |
| 2099 </a></div></td> | |
| 2100 <td>32.2</td> | |
| 2101 <td>77.3</td> | |
| 2102 <td>100%</td> | |
| 2103 <td>0.0007913</td> | |
| 2104 <td>100%</td> | |
|
118
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|
2105 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYA_0?report=genbank&log$=nuclalign">2GYA_0</a></td> |
| 32 | 2106 </tr> |
| 2107 <tr> | |
| 59 | 2108 <td><div><a href="#hit1-20" |
| 32 | 2109 title="Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400." |
| 59 | 2110 id="description1-20"> |
| 32 | 2111 Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. |
| 2112 </a></div></td> | |
| 2113 <td>32.2</td> | |
| 2114 <td>77.3</td> | |
| 2115 <td>100%</td> | |
| 2116 <td>0.0007913</td> | |
| 2117 <td>100%</td> | |
|
118
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|
2118 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2I2V_B?report=genbank&log$=nuclalign">2I2V_B</a></td> |
| 32 | 2119 </tr> |
| 2120 <tr> | |
| 59 | 2121 <td><div><a href="#hit1-21" |
| 32 | 2122 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. " |
| 59 | 2123 id="description1-21"> |
| 32 | 2124 Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. |
| 2125 </a></div></td> | |
| 2126 <td>32.2</td> | |
| 2127 <td>77.3</td> | |
| 2128 <td>100%</td> | |
| 2129 <td>0.0007913</td> | |
| 2130 <td>100%</td> | |
|
118
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|
2131 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AW4_B?report=genbank&log$=nuclalign">2AW4_B</a></td> |
| 32 | 2132 </tr> |
| 2133 <tr> | |
| 59 | 2134 <td><div><a href="#hit1-22" |
| 32 | 2135 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. " |
| 59 | 2136 id="description1-22"> |
| 32 | 2137 Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. |
| 2138 </a></div></td> | |
| 2139 <td>32.2</td> | |
| 2140 <td>77.3</td> | |
| 2141 <td>100%</td> | |
| 2142 <td>0.0007913</td> | |
| 2143 <td>100%</td> | |
|
118
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changeset
|
2144 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AWB_B?report=genbank&log$=nuclalign">2AWB_B</a></td> |
| 32 | 2145 </tr> |
| 2146 <tr> | |
| 59 | 2147 <td><div><a href="#hit1-23" |
| 32 | 2148 title="Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. " |
| 59 | 2149 id="description1-23"> |
| 32 | 2150 Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. |
| 2151 </a></div></td> | |
| 2152 <td>32.2</td> | |
| 2153 <td>77.3</td> | |
| 2154 <td>100%</td> | |
| 2155 <td>0.0007913</td> | |
| 2156 <td>100%</td> | |
|
118
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|
2157 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1VS6_B?report=genbank&log$=nuclalign">1VS6_B</a></td> |
| 32 | 2158 </tr> |
| 2159 <tr> | |
| 59 | 2160 <td><div><a href="#hit1-24" |
| 32 | 2161 title="Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome " |
| 59 | 2162 id="description1-24"> |
| 32 | 2163 Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome |
| 2164 </a></div></td> | |
| 2165 <td>32.2</td> | |
| 2166 <td>77.3</td> | |
| 2167 <td>100%</td> | |
| 2168 <td>0.0007913</td> | |
| 2169 <td>100%</td> | |
|
118
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|
2170 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1P85_0?report=genbank&log$=nuclalign">1P85_0</a></td> |
| 32 | 2171 </tr> |
| 2172 <tr> | |
| 59 | 2173 <td><div><a href="#hit1-25" |
| 32 | 2174 title="Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution" |
| 59 | 2175 id="description1-25"> |
| 32 | 2176 Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution |
| 2177 </a></div></td> | |
| 2178 <td>26.3</td> | |
| 2179 <td>40.6</td> | |
| 2180 <td>81%</td> | |
| 2181 <td>0.04882</td> | |
| 2182 <td>100%</td> | |
|
118
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|
2183 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&log$=nuclalign">1C2W_B</a></td> |
| 32 | 2184 </tr> |
| 2185 <tr> | |
| 59 | 2186 <td><div><a href="#hit1-26" |
| 32 | 2187 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome" |
| 59 | 2188 id="description1-26"> |
| 32 | 2189 Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome |
| 2190 </a></div></td> | |
| 2191 <td>18.3</td> | |
| 2192 <td>77.8</td> | |
| 2193 <td>88%</td> | |
| 2194 <td>11.9</td> | |
| 2195 <td>100%</td> | |
|
118
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|
2196 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">3J62_AA</a></td> |
| 32 | 2197 </tr> |
| 2198 <tr> | |
| 59 | 2199 <td><div><a href="#hit1-27" |
| 32 | 2200 title="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome" |
| 59 | 2201 id="description1-27"> |
| 32 | 2202 Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome |
| 2203 </a></div></td> | |
| 2204 <td>18.3</td> | |
| 2205 <td>18.3</td> | |
| 2206 <td>56%</td> | |
| 2207 <td>11.9</td> | |
| 2208 <td>100%</td> | |
|
118
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|
2209 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">4CE4_A</a></td> |
| 32 | 2210 </tr> |
| 2211 <tr> | |
| 59 | 2212 <td><div><a href="#hit1-28" |
| 32 | 2213 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex" |
| 59 | 2214 id="description1-28"> |
| 32 | 2215 Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex |
| 2216 </a></div></td> | |
| 2217 <td>18.3</td> | |
| 2218 <td>79.8</td> | |
| 2219 <td>81%</td> | |
| 2220 <td>11.9</td> | |
| 2221 <td>100%</td> | |
|
118
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|
2222 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">4BYP_5</a></td> |
| 32 | 2223 </tr> |
| 2224 <tr> | |
| 59 | 2225 <td><div><a href="#hit1-29" |
| 32 | 2226 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex" |
| 59 | 2227 id="description1-29"> |
| 32 | 2228 Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex |
| 2229 </a></div></td> | |
| 2230 <td>18.3</td> | |
| 2231 <td>79.8</td> | |
| 2232 <td>81%</td> | |
| 2233 <td>11.9</td> | |
| 2234 <td>100%</td> | |
|
118
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|
2235 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">4BYW_5</a></td> |
| 32 | 2236 </tr> |
| 2237 <tr> | |
|
119
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|
2238 <td><div><a href="#hit1-30" |
|
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|
2239 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)" |
|
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|
2240 id="description1-30"> |
|
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118
diff
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|
2241 Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit) |
|
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parents:
118
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|
2242 </a></div></td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
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118
diff
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|
2243 <td>18.3</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
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parents:
118
diff
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|
2244 <td>36.7</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2245 <td>81%</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2246 <td>11.9</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2247 <td>92%</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2248 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">3J44_1</a></td> |
|
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parents:
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diff
changeset
|
2249 </tr> |
|
591dc9c24824
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|
2250 <tr> |
| 59 | 2251 <td><div><a href="#hit1-31" |
| 32 | 2252 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins" |
| 59 | 2253 id="description1-31"> |
| 32 | 2254 Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins |
| 2255 </a></div></td> | |
| 2256 <td>18.3</td> | |
| 2257 <td>51.0</td> | |
| 2258 <td>75%</td> | |
| 2259 <td>11.9</td> | |
| 2260 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
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changeset
|
2261 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">4HUB_0</a></td> |
| 32 | 2262 </tr> |
| 2263 <tr> | |
| 59 | 2264 <td><div><a href="#hit1-32" |
| 32 | 2265 title="Chain 5, Structure Of The H. Sapiens 60s Rrna" |
| 59 | 2266 id="description1-32"> |
| 32 | 2267 Chain 5, Structure Of The H. Sapiens 60s Rrna |
| 2268 </a></div></td> | |
| 2269 <td>18.3</td> | |
| 2270 <td>128.8</td> | |
| 2271 <td>100%</td> | |
| 2272 <td>11.9</td> | |
| 2273 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2274 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">3J3F_5</a></td> |
| 32 | 2275 </tr> |
| 2276 <tr> | |
| 59 | 2277 <td><div><a href="#hit1-33" |
| 32 | 2278 title="Chain 5, Structure Of The D. Melanogaster 60s Rrna" |
| 59 | 2279 id="description1-33"> |
| 32 | 2280 Chain 5, Structure Of The D. Melanogaster 60s Rrna |
| 2281 </a></div></td> | |
| 2282 <td>18.3</td> | |
| 2283 <td>63.4</td> | |
| 2284 <td>100%</td> | |
| 2285 <td>11.9</td> | |
| 2286 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2287 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">3J3E_5</a></td> |
| 32 | 2288 </tr> |
| 2289 <tr> | |
| 59 | 2290 <td><div><a href="#hit1-34" |
| 32 | 2291 title="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome" |
| 59 | 2292 id="description1-34"> |
| 32 | 2293 Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |
| 2294 </a></div></td> | |
| 2295 <td>18.3</td> | |
| 2296 <td>32.7</td> | |
| 2297 <td>81%</td> | |
| 2298 <td>11.9</td> | |
| 2299 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2300 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">3ZEX_B</a></td> |
| 32 | 2301 </tr> |
| 2302 <tr> | |
|
119
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|
2303 <td><div><a href="#hit1-35" |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
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parents:
118
diff
changeset
|
2304 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)" |
|
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tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
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parents:
118
diff
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|
2305 id="description1-35"> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
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parents:
118
diff
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|
2306 Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna) |
|
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parents:
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diff
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|
2307 </a></div></td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2308 <td>18.3</td> |
|
591dc9c24824
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Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2309 <td>36.7</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2310 <td>81%</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2311 <td>11.9</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2312 <td>92%</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
2313 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">3J2L_1</a></td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2314 </tr> |
|
591dc9c24824
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Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
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|
2315 <tr> |
| 59 | 2316 <td><div><a href="#hit1-36" |
| 32 | 2317 title="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit" |
| 59 | 2318 id="description1-36"> |
| 32 | 2319 Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit |
| 2320 </a></div></td> | |
| 2321 <td>18.3</td> | |
| 2322 <td>32.7</td> | |
| 2323 <td>56%</td> | |
| 2324 <td>11.9</td> | |
| 2325 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2326 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&log$=nuclalign">3OW2_0</a></td> |
| 32 | 2327 </tr> |
| 2328 <tr> | |
| 59 | 2329 <td><div><a href="#hit1-37" |
| 32 | 2330 title="Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6" |
| 59 | 2331 id="description1-37"> |
| 32 | 2332 Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6 |
| 2333 </a></div></td> | |
| 2334 <td>18.3</td> | |
| 2335 <td>51.0</td> | |
| 2336 <td>75%</td> | |
| 2337 <td>11.9</td> | |
| 2338 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2339 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4ADX_0?report=genbank&log$=nuclalign">4ADX_0</a></td> |
| 32 | 2340 </tr> |
| 2341 <tr> | |
| 59 | 2342 <td><div><a href="#hit1-38" |
| 32 | 2343 title="Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B" |
| 59 | 2344 id="description1-38"> |
| 32 | 2345 Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B |
| 2346 </a></div></td> | |
| 2347 <td>18.3</td> | |
| 2348 <td>47.1</td> | |
| 2349 <td>88%</td> | |
| 2350 <td>11.9</td> | |
| 2351 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2352 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5F_6?report=genbank&log$=nuclalign">3U5F_6</a></td> |
| 32 | 2353 </tr> |
| 2354 <tr> | |
| 59 | 2355 <td><div><a href="#hit1-39" |
| 32 | 2356 title="Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A " |
| 59 | 2357 id="description1-39"> |
| 32 | 2358 Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A |
| 2359 </a></div></td> | |
| 2360 <td>18.3</td> | |
| 2361 <td>47.1</td> | |
| 2362 <td>88%</td> | |
| 2363 <td>11.9</td> | |
| 2364 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2365 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5B_2?report=genbank&log$=nuclalign">3U5B_2</a></td> |
| 32 | 2366 </tr> |
| 2367 <tr> | |
| 59 | 2368 <td><div><a href="#hit1-40" |
| 32 | 2369 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4." |
| 59 | 2370 id="description1-40"> |
| 32 | 2371 Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4. |
| 2372 </a></div></td> | |
| 2373 <td>18.3</td> | |
| 2374 <td>51.0</td> | |
| 2375 <td>75%</td> | |
| 2376 <td>11.9</td> | |
| 2377 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2378 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1D_1?report=genbank&log$=nuclalign">4A1D_1</a></td> |
| 32 | 2379 </tr> |
| 2380 <tr> | |
| 59 | 2381 <td><div><a href="#hit1-41" |
| 32 | 2382 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1" |
| 59 | 2383 id="description1-41"> |
| 32 | 2384 Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1 |
| 2385 </a></div></td> | |
| 2386 <td>18.3</td> | |
| 2387 <td>51.0</td> | |
| 2388 <td>75%</td> | |
| 2389 <td>11.9</td> | |
| 2390 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2391 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A18_1?report=genbank&log$=nuclalign">4A18_1</a></td> |
| 32 | 2392 </tr> |
| 2393 <tr> | |
| 59 | 2394 <td><div><a href="#hit1-42" |
| 32 | 2395 title="Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. " |
| 59 | 2396 id="description1-42"> |
| 32 | 2397 Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. |
| 2398 </a></div></td> | |
| 2399 <td>18.3</td> | |
| 2400 <td>51.0</td> | |
| 2401 <td>75%</td> | |
| 2402 <td>11.9</td> | |
| 2403 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2404 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1B_1?report=genbank&log$=nuclalign">4A1B_1</a></td> |
| 32 | 2405 </tr> |
| 2406 <tr> | |
| 59 | 2407 <td><div><a href="#hit1-43" |
| 32 | 2408 title="Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1" |
| 59 | 2409 id="description1-43"> |
| 32 | 2410 Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1 |
| 2411 </a></div></td> | |
| 2412 <td>18.3</td> | |
| 2413 <td>18.3</td> | |
| 2414 <td>56%</td> | |
| 2415 <td>11.9</td> | |
| 2416 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2417 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0L_8?report=genbank&log$=nuclalign">3J0L_8</a></td> |
| 32 | 2418 </tr> |
| 2419 <tr> | |
| 59 | 2420 <td><div><a href="#hit1-44" |
| 32 | 2421 title="Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2" |
| 59 | 2422 id="description1-44"> |
| 32 | 2423 Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2 |
| 2424 </a></div></td> | |
| 2425 <td>18.3</td> | |
| 2426 <td>18.3</td> | |
| 2427 <td>56%</td> | |
| 2428 <td>11.9</td> | |
| 2429 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2430 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0O_8?report=genbank&log$=nuclalign">3J0O_8</a></td> |
| 32 | 2431 </tr> |
| 2432 <tr> | |
| 59 | 2433 <td><div><a href="#hit1-45" |
| 32 | 2434 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. " |
| 59 | 2435 id="description1-45"> |
| 32 | 2436 Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. |
| 2437 </a></div></td> | |
| 2438 <td>18.3</td> | |
| 2439 <td>79.8</td> | |
| 2440 <td>81%</td> | |
| 2441 <td>11.9</td> | |
| 2442 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2443 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O58_1?report=genbank&log$=nuclalign">3O58_1</a></td> |
| 32 | 2444 </tr> |
| 2445 <tr> | |
| 59 | 2446 <td><div><a href="#hit1-46" |
| 32 | 2447 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. " |
| 59 | 2448 id="description1-46"> |
| 32 | 2449 Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. |
| 2450 </a></div></td> | |
| 2451 <td>18.3</td> | |
| 2452 <td>79.8</td> | |
| 2453 <td>81%</td> | |
| 2454 <td>11.9</td> | |
| 2455 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2456 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O5H_1?report=genbank&log$=nuclalign">3O5H_1</a></td> |
| 32 | 2457 </tr> |
| 2458 <tr> | |
| 59 | 2459 <td><div><a href="#hit1-47" |
| 32 | 2460 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit." |
| 59 | 2461 id="description1-47"> |
| 32 | 2462 Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. |
| 2463 </a></div></td> | |
| 2464 <td>18.3</td> | |
| 2465 <td>47.1</td> | |
| 2466 <td>88%</td> | |
| 2467 <td>11.9</td> | |
| 2468 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2469 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O2Z_1?report=genbank&log$=nuclalign">3O2Z_1</a></td> |
| 32 | 2470 </tr> |
| 2471 <tr> | |
| 59 | 2472 <td><div><a href="#hit1-48" |
| 32 | 2473 title="Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit." |
| 59 | 2474 id="description1-48"> |
| 32 | 2475 Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. |
| 2476 </a></div></td> | |
| 2477 <td>18.3</td> | |
| 2478 <td>47.1</td> | |
| 2479 <td>88%</td> | |
| 2480 <td>11.9</td> | |
| 2481 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2482 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O30_1?report=genbank&log$=nuclalign">3O30_1</a></td> |
| 32 | 2483 </tr> |
| 2484 <tr> | |
| 59 | 2485 <td><div><a href="#hit1-49" |
| 32 | 2486 title="Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)" |
| 59 | 2487 id="description1-49"> |
| 32 | 2488 Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation) |
| 2489 </a></div></td> | |
| 2490 <td>18.3</td> | |
| 2491 <td>79.8</td> | |
| 2492 <td>81%</td> | |
| 2493 <td>11.9</td> | |
| 2494 <td>100%</td> | |
|
118
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|
2495 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZF_A?report=genbank&log$=nuclalign">3IZF_A</a></td> |
| 32 | 2496 </tr> |
| 2497 <tr> | |
| 59 | 2498 <td><div><a href="#hit1-50" |
| 32 | 2499 title="Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome" |
| 59 | 2500 id="description1-50"> |
| 32 | 2501 Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome |
| 2502 </a></div></td> | |
| 2503 <td>18.3</td> | |
| 2504 <td>47.1</td> | |
| 2505 <td>88%</td> | |
| 2506 <td>11.9</td> | |
| 2507 <td>100%</td> | |
|
118
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changeset
|
2508 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZE_A?report=genbank&log$=nuclalign">3IZE_A</a></td> |
| 32 | 2509 </tr> |
| 2510 <tr> | |
| 59 | 2511 <td><div><a href="#hit1-51" |
| 32 | 2512 title="Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)" |
| 59 | 2513 id="description1-51"> |
| 32 | 2514 Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) |
| 2515 </a></div></td> | |
| 2516 <td>18.3</td> | |
| 2517 <td>18.3</td> | |
| 2518 <td>56%</td> | |
| 2519 <td>11.9</td> | |
| 2520 <td>100%</td> | |
|
118
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114
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changeset
|
2521 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_I?report=genbank&log$=nuclalign">3KO2_I</a></td> |
| 32 | 2522 </tr> |
| 2523 <tr> | |
| 59 | 2524 <td><div><a href="#hit1-52" |
| 32 | 2525 title="Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)" |
| 59 | 2526 id="description1-52"> |
| 32 | 2527 Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) |
| 2528 </a></div></td> | |
| 2529 <td>18.3</td> | |
| 2530 <td>18.3</td> | |
| 2531 <td>56%</td> | |
| 2532 <td>11.9</td> | |
| 2533 <td>100%</td> | |
|
118
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114
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changeset
|
2534 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_H?report=genbank&log$=nuclalign">3KO2_H</a></td> |
| 32 | 2535 </tr> |
| 2536 <tr> | |
| 59 | 2537 <td><div><a href="#hit1-53" |
| 32 | 2538 title="Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)" |
| 59 | 2539 id="description1-53"> |
| 32 | 2540 Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) |
| 2541 </a></div></td> | |
| 2542 <td>18.3</td> | |
| 2543 <td>18.3</td> | |
| 2544 <td>56%</td> | |
| 2545 <td>11.9</td> | |
| 2546 <td>100%</td> | |
|
118
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changeset
|
2547 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_D?report=genbank&log$=nuclalign">3KO2_D</a></td> |
| 32 | 2548 </tr> |
| 2549 <tr> | |
| 59 | 2550 <td><div><a href="#hit1-54" |
| 32 | 2551 title="Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)" |
| 59 | 2552 id="description1-54"> |
| 32 | 2553 Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) |
| 2554 </a></div></td> | |
| 2555 <td>18.3</td> | |
| 2556 <td>18.3</td> | |
| 2557 <td>56%</td> | |
| 2558 <td>11.9</td> | |
| 2559 <td>100%</td> | |
|
118
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114
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changeset
|
2560 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_C?report=genbank&log$=nuclalign">3KO2_C</a></td> |
| 32 | 2561 </tr> |
| 2562 <tr> | |
| 59 | 2563 <td><div><a href="#hit1-55" |
| 32 | 2564 title="Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit" |
| 59 | 2565 id="description1-55"> |
| 32 | 2566 Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit |
| 2567 </a></div></td> | |
| 2568 <td>18.3</td> | |
| 2569 <td>51.0</td> | |
| 2570 <td>75%</td> | |
| 2571 <td>11.9</td> | |
| 2572 <td>100%</td> | |
|
118
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114
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changeset
|
2573 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3I56_0?report=genbank&log$=nuclalign">3I56_0</a></td> |
| 32 | 2574 </tr> |
| 2575 <tr> | |
| 59 | 2576 <td><div><a href="#hit1-56" |
| 32 | 2577 title="Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution" |
| 59 | 2578 id="description1-56"> |
| 32 | 2579 Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution |
| 2580 </a></div></td> | |
| 2581 <td>18.3</td> | |
| 2582 <td>79.8</td> | |
| 2583 <td>81%</td> | |
| 2584 <td>11.9</td> | |
| 2585 <td>100%</td> | |
|
118
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114
diff
changeset
|
2586 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYX_5?report=genbank&log$=nuclalign">3JYX_5</a></td> |
| 32 | 2587 </tr> |
| 2588 <tr> | |
| 59 | 2589 <td><div><a href="#hit1-57" |
| 32 | 2590 title="Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution" |
| 59 | 2591 id="description1-57"> |
| 32 | 2592 Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution |
| 2593 </a></div></td> | |
| 2594 <td>18.3</td> | |
| 2595 <td>47.1</td> | |
| 2596 <td>88%</td> | |
| 2597 <td>11.9</td> | |
| 2598 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2599 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYV_A?report=genbank&log$=nuclalign">3JYV_A</a></td> |
| 32 | 2600 </tr> |
| 2601 <tr> | |
| 59 | 2602 <td><div><a href="#hit1-58" |
| 32 | 2603 title="Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h." |
| 59 | 2604 id="description1-58"> |
| 32 | 2605 Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h. |
| 2606 </a></div></td> | |
| 2607 <td>18.3</td> | |
| 2608 <td>32.7</td> | |
| 2609 <td>56%</td> | |
| 2610 <td>11.9</td> | |
| 2611 <td>100%</td> | |
|
118
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114
diff
changeset
|
2612 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S1I_3?report=genbank&log$=nuclalign">1S1I_3</a></td> |
| 32 | 2613 </tr> |
| 2614 <tr> | |
| 59 | 2615 <td><div><a href="#hit1-59" |
| 32 | 2616 title="Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit" |
| 59 | 2617 id="description1-59"> |
| 32 | 2618 Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit |
| 2619 </a></div></td> | |
| 2620 <td>18.3</td> | |
| 2621 <td>32.7</td> | |
| 2622 <td>56%</td> | |
| 2623 <td>11.9</td> | |
| 2624 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
2625 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QEX_0?report=genbank&log$=nuclalign">2QEX_0</a></td> |
| 32 | 2626 </tr> |
| 2627 <tr> | |
| 59 | 2628 <td><div><a href="#hit1-60" |
| 32 | 2629 title="Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui" |
| 59 | 2630 id="description1-60"> |
| 32 | 2631 Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui |
| 2632 </a></div></td> | |
| 2633 <td>18.3</td> | |
| 2634 <td>32.7</td> | |
| 2635 <td>56%</td> | |
| 2636 <td>11.9</td> | |
| 2637 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2638 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CPW_0?report=genbank&log$=nuclalign">3CPW_0</a></td> |
| 32 | 2639 </tr> |
| 2640 <tr> | |
| 59 | 2641 <td><div><a href="#hit1-61" |
| 32 | 2642 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a " |
| 59 | 2643 id="description1-61"> |
| 32 | 2644 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a |
| 2645 </a></div></td> | |
| 2646 <td>18.3</td> | |
| 2647 <td>51.0</td> | |
| 2648 <td>75%</td> | |
| 2649 <td>11.9</td> | |
| 2650 <td>100%</td> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2651 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCV_0?report=genbank&log$=nuclalign">3CCV_0</a></td> |
| 32 | 2652 </tr> |
| 2653 <tr> | |
| 59 | 2654 <td><div><a href="#hit1-62" |
| 32 | 2655 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c" |
| 59 | 2656 id="description1-62"> |
| 32 | 2657 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c |
| 2658 </a></div></td> | |
| 2659 <td>18.3</td> | |
| 2660 <td>51.0</td> | |
| 2661 <td>75%</td> | |
| 2662 <td>11.9</td> | |
| 2663 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2664 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCU_0?report=genbank&log$=nuclalign">3CCU_0</a></td> |
| 32 | 2665 </tr> |
| 2666 <tr> | |
| 59 | 2667 <td><div><a href="#hit1-63" |
| 32 | 2668 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a" |
| 59 | 2669 id="description1-63"> |
| 32 | 2670 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a |
| 2671 </a></div></td> | |
| 2672 <td>18.3</td> | |
| 2673 <td>51.0</td> | |
| 2674 <td>75%</td> | |
| 2675 <td>11.9</td> | |
| 2676 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2677 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCS_0?report=genbank&log$=nuclalign">3CCS_0</a></td> |
| 32 | 2678 </tr> |
| 2679 <tr> | |
| 59 | 2680 <td><div><a href="#hit1-64" |
| 32 | 2681 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model." |
| 59 | 2682 id="description1-64"> |
| 32 | 2683 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model. |
| 2684 </a></div></td> | |
| 2685 <td>18.3</td> | |
| 2686 <td>51.0</td> | |
| 2687 <td>75%</td> | |
| 2688 <td>11.9</td> | |
| 2689 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2690 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCR_0?report=genbank&log$=nuclalign">3CCR_0</a></td> |
| 32 | 2691 </tr> |
| 2692 <tr> | |
| 59 | 2693 <td><div><a href="#hit1-65" |
| 32 | 2694 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u" |
| 59 | 2695 id="description1-65"> |
| 32 | 2696 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u |
| 2697 </a></div></td> | |
| 2698 <td>18.3</td> | |
| 2699 <td>51.0</td> | |
| 2700 <td>75%</td> | |
| 2701 <td>11.9</td> | |
| 2702 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2703 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCQ_0?report=genbank&log$=nuclalign">3CCQ_0</a></td> |
| 32 | 2704 </tr> |
| 2705 <tr> | |
| 59 | 2706 <td><div><a href="#hit1-66" |
| 32 | 2707 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u" |
| 59 | 2708 id="description1-66"> |
| 32 | 2709 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u |
| 2710 </a></div></td> | |
| 2711 <td>18.3</td> | |
| 2712 <td>36.7</td> | |
| 2713 <td>75%</td> | |
| 2714 <td>11.9</td> | |
| 2715 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2716 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCM_0?report=genbank&log$=nuclalign">3CCM_0</a></td> |
| 32 | 2717 </tr> |
| 2718 <tr> | |
| 59 | 2719 <td><div><a href="#hit1-67" |
| 32 | 2720 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model." |
| 59 | 2721 id="description1-67"> |
| 32 | 2722 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model. |
| 2723 </a></div></td> | |
| 2724 <td>18.3</td> | |
| 2725 <td>51.0</td> | |
| 2726 <td>75%</td> | |
| 2727 <td>11.9</td> | |
| 2728 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2729 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCL_0?report=genbank&log$=nuclalign">3CCL_0</a></td> |
| 32 | 2730 </tr> |
| 2731 <tr> | |
| 59 | 2732 <td><div><a href="#hit1-68" |
| 32 | 2733 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u" |
| 59 | 2734 id="description1-68"> |
| 32 | 2735 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u |
| 2736 </a></div></td> | |
| 2737 <td>18.3</td> | |
| 2738 <td>51.0</td> | |
| 2739 <td>75%</td> | |
| 2740 <td>11.9</td> | |
| 2741 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2742 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCJ_0?report=genbank&log$=nuclalign">3CCJ_0</a></td> |
| 32 | 2743 </tr> |
| 2744 <tr> | |
| 59 | 2745 <td><div><a href="#hit1-69" |
| 32 | 2746 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a" |
| 59 | 2747 id="description1-69"> |
| 32 | 2748 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a |
| 2749 </a></div></td> | |
| 2750 <td>18.3</td> | |
| 2751 <td>51.0</td> | |
| 2752 <td>75%</td> | |
| 2753 <td>11.9</td> | |
| 2754 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2755 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCE_0?report=genbank&log$=nuclalign">3CCE_0</a></td> |
| 32 | 2756 </tr> |
| 2757 <tr> | |
| 59 | 2758 <td><div><a href="#hit1-70" |
| 32 | 2759 title="Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u" |
| 59 | 2760 id="description1-70"> |
| 32 | 2761 Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u |
| 2762 </a></div></td> | |
| 2763 <td>18.3</td> | |
| 2764 <td>51.0</td> | |
| 2765 <td>75%</td> | |
| 2766 <td>11.9</td> | |
| 2767 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2768 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC7_0?report=genbank&log$=nuclalign">3CC7_0</a></td> |
| 32 | 2769 </tr> |
| 2770 <tr> | |
| 59 | 2771 <td><div><a href="#hit1-71" |
| 32 | 2772 title="Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins " |
| 59 | 2773 id="description1-71"> |
| 32 | 2774 Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins |
| 2775 </a></div></td> | |
| 2776 <td>18.3</td> | |
| 2777 <td>51.0</td> | |
| 2778 <td>75%</td> | |
| 2779 <td>11.9</td> | |
| 2780 <td>100%</td> | |
|
118
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changeset
|
2781 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC2_0?report=genbank&log$=nuclalign">3CC2_0</a></td> |
| 32 | 2782 </tr> |
| 2783 <tr> | |
| 59 | 2784 <td><div><a href="#hit1-72" |
| 32 | 2785 title="Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map" |
| 59 | 2786 id="description1-72"> |
| 32 | 2787 Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map |
| 2788 </a></div></td> | |
| 2789 <td>18.3</td> | |
| 2790 <td>63.4</td> | |
| 2791 <td>81%</td> | |
| 2792 <td>11.9</td> | |
| 2793 <td>100%</td> | |
|
118
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|
2794 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2ZKR_0?report=genbank&log$=nuclalign">2ZKR_0</a></td> |
| 32 | 2795 </tr> |
| 2796 <tr> | |
| 59 | 2797 <td><div><a href="#hit1-73" |
| 32 | 2798 title="Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit" |
| 59 | 2799 id="description1-73"> |
| 32 | 2800 Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit |
| 2801 </a></div></td> | |
| 2802 <td>18.3</td> | |
| 2803 <td>32.7</td> | |
| 2804 <td>56%</td> | |
| 2805 <td>11.9</td> | |
| 2806 <td>100%</td> | |
|
118
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|
2807 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QA4_0?report=genbank&log$=nuclalign">2QA4_0</a></td> |
| 32 | 2808 </tr> |
| 2809 <tr> | |
| 59 | 2810 <td><div><a href="#hit1-74" |
| 32 | 2811 title="Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome" |
| 59 | 2812 id="description1-74"> |
| 32 | 2813 Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome |
| 2814 </a></div></td> | |
| 2815 <td>18.3</td> | |
| 2816 <td>18.3</td> | |
| 2817 <td>56%</td> | |
| 2818 <td>11.9</td> | |
| 2819 <td>100%</td> | |
|
118
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changeset
|
2820 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2FTC_R?report=genbank&log$=nuclalign">2FTC_R</a></td> |
| 32 | 2821 </tr> |
| 2822 <tr> | |
| 59 | 2823 <td><div><a href="#hit1-75" |
| 32 | 2824 title="Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution " |
| 59 | 2825 id="description1-75"> |
| 32 | 2826 Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution |
| 2827 </a></div></td> | |
| 2828 <td>18.3</td> | |
| 2829 <td>32.7</td> | |
| 2830 <td>56%</td> | |
| 2831 <td>11.9</td> | |
| 2832 <td>100%</td> | |
|
118
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changeset
|
2833 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S72_0?report=genbank&log$=nuclalign">1S72_0</a></td> |
| 32 | 2834 </tr> |
| 2835 <tr> | |
| 59 | 2836 <td><div><a href="#hit1-76" |
| 32 | 2837 title="Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui " |
| 59 | 2838 id="description1-76"> |
| 32 | 2839 Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui |
| 2840 </a></div></td> | |
| 2841 <td>18.3</td> | |
| 2842 <td>51.0</td> | |
| 2843 <td>75%</td> | |
| 2844 <td>11.9</td> | |
| 2845 <td>100%</td> | |
|
118
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changeset
|
2846 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YIT_0?report=genbank&log$=nuclalign">1YIT_0</a></td> |
| 32 | 2847 </tr> |
| 2848 <tr> | |
| 59 | 2849 <td><div><a href="#hit1-77" |
| 32 | 2850 title="Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui " |
| 59 | 2851 id="description1-77"> |
| 32 | 2852 Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui |
| 2853 </a></div></td> | |
| 2854 <td>18.3</td> | |
| 2855 <td>51.0</td> | |
| 2856 <td>75%</td> | |
| 2857 <td>11.9</td> | |
| 2858 <td>100%</td> | |
|
118
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changeset
|
2859 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YHQ_0?report=genbank&log$=nuclalign">1YHQ_0</a></td> |
| 32 | 2860 </tr> |
| 2861 <tr> | |
| 59 | 2862 <td><div><a href="#hit1-78" |
| 32 | 2863 title="Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui" |
| 59 | 2864 id="description1-78"> |
| 32 | 2865 Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui |
| 2866 </a></div></td> | |
| 2867 <td>18.3</td> | |
| 2868 <td>51.0</td> | |
| 2869 <td>75%</td> | |
| 2870 <td>11.9</td> | |
| 2871 <td>100%</td> | |
|
118
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changeset
|
2872 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YJW_0?report=genbank&log$=nuclalign">1YJW_0</a></td> |
| 32 | 2873 </tr> |
| 2874 <tr> | |
| 59 | 2875 <td><div><a href="#hit1-79" |
| 32 | 2876 title="Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit." |
| 59 | 2877 id="description1-79"> |
| 32 | 2878 Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit. |
| 2879 </a></div></td> | |
| 2880 <td>18.3</td> | |
| 2881 <td>32.7</td> | |
| 2882 <td>56%</td> | |
| 2883 <td>11.9</td> | |
| 2884 <td>100%</td> | |
|
118
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114
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changeset
|
2885 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1Q86_A?report=genbank&log$=nuclalign">1Q86_A</a></td> |
| 32 | 2886 </tr> |
| 2887 <tr> | |
| 59 | 2888 <td><div><a href="#hit1-80" |
| 32 | 2889 title="Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution " |
| 59 | 2890 id="description1-80"> |
| 32 | 2891 Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution |
| 2892 </a></div></td> | |
| 2893 <td>18.3</td> | |
| 2894 <td>32.7</td> | |
| 2895 <td>56%</td> | |
| 2896 <td>11.9</td> | |
| 2897 <td>100%</td> | |
|
118
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114
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changeset
|
2898 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1JJ2_0?report=genbank&log$=nuclalign">1JJ2_0</a></td> |
| 32 | 2899 </tr> |
| 2900 <tr> | |
| 59 | 2901 <td><div><a href="#hit1-81" |
| 32 | 2902 title="Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit" |
| 59 | 2903 id="description1-81"> |
| 32 | 2904 Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit |
| 2905 </a></div></td> | |
| 2906 <td>18.3</td> | |
| 2907 <td>32.7</td> | |
| 2908 <td>56%</td> | |
| 2909 <td>11.9</td> | |
| 2910 <td>100%</td> | |
|
118
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changeset
|
2911 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1KC8_A?report=genbank&log$=nuclalign">1KC8_A</a></td> |
| 32 | 2912 </tr> |
| 2913 <tr> | |
| 59 | 2914 <td><div><a href="#hit1-82" |
| 32 | 2915 title="Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution" |
| 59 | 2916 id="description1-82"> |
| 32 | 2917 Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution |
| 2918 </a></div></td> | |
| 2919 <td>18.3</td> | |
| 2920 <td>32.7</td> | |
| 2921 <td>56%</td> | |
| 2922 <td>11.9</td> | |
| 2923 <td>100%</td> | |
|
118
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changeset
|
2924 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFK_0?report=genbank&log$=nuclalign">1FFK_0</a></td> |
| 32 | 2925 </tr> |
| 2926 <tr> | |
| 59 | 2927 <td><div><a href="#hit1-83" |
| 32 | 2928 title="Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound" |
| 59 | 2929 id="description1-83"> |
| 32 | 2930 Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound |
| 2931 </a></div></td> | |
| 2932 <td>18.3</td> | |
| 2933 <td>32.7</td> | |
| 2934 <td>56%</td> | |
| 2935 <td>11.9</td> | |
| 2936 <td>100%</td> | |
|
118
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114
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changeset
|
2937 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FG0_A?report=genbank&log$=nuclalign">1FG0_A</a></td> |
| 32 | 2938 </tr> |
| 2939 <tr> | |
| 59 | 2940 <td><div><a href="#hit1-84" |
| 32 | 2941 title="Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin" |
| 59 | 2942 id="description1-84"> |
| 32 | 2943 Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin |
| 2944 </a></div></td> | |
| 2945 <td>18.3</td> | |
| 2946 <td>32.7</td> | |
| 2947 <td>56%</td> | |
| 2948 <td>11.9</td> | |
| 2949 <td>100%</td> | |
|
118
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114
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|
2950 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFZ_A?report=genbank&log$=nuclalign">1FFZ_A</a></td> |
| 32 | 2951 </tr> |
| 2952 <tr> | |
| 59 | 2953 <td><div><a href="#hit1-85" |
| 32 | 2954 title="Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate" |
| 59 | 2955 id="description1-85"> |
| 32 | 2956 Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate |
| 2957 </a></div></td> | |
| 2958 <td>16.4</td> | |
| 2959 <td>16.4</td> | |
| 2960 <td>50%</td> | |
| 2961 <td>47.03</td> | |
| 2962 <td>100%</td> | |
|
118
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114
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changeset
|
2963 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_F?report=genbank&log$=nuclalign">4LGT_F</a></td> |
| 32 | 2964 </tr> |
| 2965 <tr> | |
| 59 | 2966 <td><div><a href="#hit1-86" |
| 32 | 2967 title="Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate" |
| 59 | 2968 id="description1-86"> |
| 32 | 2969 Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate |
| 2970 </a></div></td> | |
| 2971 <td>16.4</td> | |
| 2972 <td>16.4</td> | |
| 2973 <td>50%</td> | |
| 2974 <td>47.03</td> | |
| 2975 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
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changeset
|
2976 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_E?report=genbank&log$=nuclalign">4LGT_E</a></td> |
| 32 | 2977 </tr> |
| 2978 <tr> | |
| 59 | 2979 <td><div><a href="#hit1-87" |
| 32 | 2980 title="Chain A, Thermus Thermophilus Ribosome" |
| 59 | 2981 id="description1-87"> |
| 32 | 2982 Chain A, Thermus Thermophilus Ribosome |
| 2983 </a></div></td> | |
| 2984 <td>16.4</td> | |
| 2985 <td>32.7</td> | |
| 2986 <td>69%</td> | |
| 2987 <td>47.03</td> | |
| 2988 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
2989 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BTD_A?report=genbank&log$=nuclalign">4BTD_A</a></td> |
| 32 | 2990 </tr> |
| 2991 <tr> | |
| 59 | 2992 <td><div><a href="#hit1-88" |
| 32 | 2993 title="Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. " |
| 59 | 2994 id="description1-88"> |
| 32 | 2995 Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. |
| 2996 </a></div></td> | |
| 2997 <td>16.4</td> | |
| 2998 <td>32.7</td> | |
| 2999 <td>69%</td> | |
| 3000 <td>47.03</td> | |
| 3001 <td>100%</td> | |
|
118
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114
diff
changeset
|
3002 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4L6J_A?report=genbank&log$=nuclalign">4L6J_A</a></td> |
| 32 | 3003 </tr> |
| 3004 <tr> | |
| 59 | 3005 <td><div><a href="#hit1-89" |
| 32 | 3006 title="Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit " |
| 59 | 3007 id="description1-89"> |
| 32 | 3008 Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit |
| 3009 </a></div></td> | |
| 3010 <td>16.4</td> | |
| 3011 <td>32.7</td> | |
| 3012 <td>69%</td> | |
| 3013 <td>47.03</td> | |
| 3014 <td>100%</td> | |
|
118
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114
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changeset
|
3015 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4KFI_A?report=genbank&log$=nuclalign">4KFI_A</a></td> |
| 32 | 3016 </tr> |
| 3017 <tr> | |
| 59 | 3018 <td><div><a href="#hit1-90" |
| 32 | 3019 title="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine" |
| 59 | 3020 id="description1-90"> |
| 32 | 3021 Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine |
| 3022 </a></div></td> | |
| 3023 <td>16.4</td> | |
| 3024 <td>32.7</td> | |
| 3025 <td>69%</td> | |
| 3026 <td>47.03</td> | |
| 3027 <td>100%</td> | |
|
118
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114
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changeset
|
3028 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0Q_A?report=genbank&log$=nuclalign">4K0Q_A</a></td> |
| 32 | 3029 </tr> |
| 3030 <tr> | |
| 59 | 3031 <td><div><a href="#hit1-91" |
| 32 | 3032 title="Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine" |
| 59 | 3033 id="description1-91"> |
| 32 | 3034 Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine |
| 3035 </a></div></td> | |
| 3036 <td>16.4</td> | |
| 3037 <td>32.7</td> | |
| 3038 <td>69%</td> | |
| 3039 <td>47.03</td> | |
| 3040 <td>100%</td> | |
|
118
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114
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changeset
|
3041 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0M_A?report=genbank&log$=nuclalign">4K0M_A</a></td> |
| 32 | 3042 </tr> |
| 3043 <tr> | |
| 59 | 3044 <td><div><a href="#hit1-92" |
| 32 | 3045 title="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)" |
| 59 | 3046 id="description1-92"> |
| 32 | 3047 Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a) |
| 3048 </a></div></td> | |
| 3049 <td>16.4</td> | |
| 3050 <td>73.8</td> | |
| 3051 <td>88%</td> | |
| 3052 <td>47.03</td> | |
| 3053 <td>100%</td> | |
|
118
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114
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changeset
|
3054 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3V_A?report=genbank&log$=nuclalign">3J3V_A</a></td> |
| 32 | 3055 </tr> |
| 3056 <tr> | |
| 59 | 3057 <td><div><a href="#hit1-93" |
| 32 | 3058 title="Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)" |
| 59 | 3059 id="description1-93"> |
| 32 | 3060 Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a) |
| 3061 </a></div></td> | |
| 3062 <td>16.4</td> | |
| 3063 <td>73.8</td> | |
| 3064 <td>88%</td> | |
| 3065 <td>47.03</td> | |
| 3066 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
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changeset
|
3067 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3W_A?report=genbank&log$=nuclalign">3J3W_A</a></td> |
| 32 | 3068 </tr> |
| 3069 <tr> | |
| 59 | 3070 <td><div><a href="#hit1-94" |
| 32 | 3071 title="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit" |
| 59 | 3072 id="description1-94"> |
| 32 | 3073 Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit |
| 3074 </a></div></td> | |
| 3075 <td>16.4</td> | |
| 3076 <td>32.7</td> | |
| 3077 <td>69%</td> | |
| 3078 <td>47.03</td> | |
| 3079 <td>100%</td> | |
|
118
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Jan Kanis <jan.code@jankanis.nl>
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114
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changeset
|
3080 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6X_A?report=genbank&log$=nuclalign">3V6X_A</a></td> |
| 32 | 3081 </tr> |
| 3082 <tr> | |
| 59 | 3083 <td><div><a href="#hit1-95" |
| 32 | 3084 title="Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit" |
| 59 | 3085 id="description1-95"> |
| 32 | 3086 Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit |
| 3087 </a></div></td> | |
| 3088 <td>16.4</td> | |
| 3089 <td>32.7</td> | |
| 3090 <td>69%</td> | |
| 3091 <td>47.03</td> | |
| 3092 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3093 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6W_A?report=genbank&log$=nuclalign">3V6W_A</a></td> |
| 32 | 3094 </tr> |
| 3095 <tr> | |
| 59 | 3096 <td><div><a href="#hit1-96" |
| 32 | 3097 title="Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object" |
| 59 | 3098 id="description1-96"> |
| 32 | 3099 Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object |
| 3100 </a></div></td> | |
| 3101 <td>16.4</td> | |
| 3102 <td>16.4</td> | |
| 3103 <td>50%</td> | |
| 3104 <td>47.03</td> | |
| 3105 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3106 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMI_DD?report=genbank&log$=nuclalign">2YMI_DD</a></td> |
| 32 | 3107 </tr> |
| 3108 <tr> | |
| 59 | 3109 <td><div><a href="#hit1-97" |
| 32 | 3110 title="Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object" |
| 59 | 3111 id="description1-97"> |
| 32 | 3112 Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object |
| 3113 </a></div></td> | |
| 3114 <td>16.4</td> | |
| 3115 <td>30.7</td> | |
| 3116 <td>56%</td> | |
| 3117 <td>47.03</td> | |
| 3118 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3119 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMF_A?report=genbank&log$=nuclalign">2YMF_A</a></td> |
| 32 | 3120 </tr> |
| 3121 <tr> | |
| 59 | 3122 <td><div><a href="#hit1-98" |
| 32 | 3123 title="Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. " |
| 59 | 3124 id="description1-98"> |
| 32 | 3125 Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. |
| 3126 </a></div></td> | |
| 3127 <td>16.4</td> | |
| 3128 <td>32.7</td> | |
| 3129 <td>69%</td> | |
| 3130 <td>47.03</td> | |
| 3131 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3132 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2J01_A?report=genbank&log$=nuclalign">2J01_A</a></td> |
| 32 | 3133 </tr> |
| 3134 <tr> | |
| 59 | 3135 <td><div><a href="#hit1-99" |
| 32 | 3136 title="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium" |
| 59 | 3137 id="description1-99"> |
| 32 | 3138 Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium |
| 3139 </a></div></td> | |
| 3140 <td>16.4</td> | |
| 3141 <td>16.4</td> | |
| 3142 <td>50%</td> | |
| 3143 <td>47.03</td> | |
| 3144 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3145 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQX_C?report=genbank&log$=nuclalign">4AQX_C</a></td> |
| 32 | 3146 </tr> |
| 3147 <tr> | |
| 59 | 3148 <td><div><a href="#hit1-100" |
| 32 | 3149 title="Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium" |
| 59 | 3150 id="description1-100"> |
| 32 | 3151 Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium |
| 3152 </a></div></td> | |
| 3153 <td>16.4</td> | |
| 3154 <td>16.4</td> | |
| 3155 <td>50%</td> | |
| 3156 <td>47.03</td> | |
| 3157 <td>100%</td> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3158 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQU_C?report=genbank&log$=nuclalign">4AQU_C</a></td> |
| 32 | 3159 </tr> |
| 3160 </table> | |
| 3161 | |
| 3162 </div></div> | |
| 3163 </section> | |
| 3164 | |
| 3165 | |
| 3166 | |
| 3167 <section class=alignments> | |
| 114 | 3168 <h3>Alignments</h3> |
| 32 | 3169 |
| 3170 <div class=grey><div class=white> | |
| 59 | 3171 <div class=alignment id=hit1-1> |
| 3172 | |
| 3173 <div class=linkheader> | |
| 3174 <div class=right><a href="#description1-1">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3175 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5K_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3176 </div> |
| 3177 | |
| 3178 <div class=title> | |
| 3179 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)</p> | |
| 3180 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3181 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5K_A?report=genbank&log$=nuclalign">gi|557804730|pdb|3J5K|A</a> |
| 32 | 3182 <span class=b>Length:</span> 2903 |
| 3183 <span class=b>Number of Matches:</span> 4 | |
| 3184 </p> | |
| 3185 </div> | |
| 3186 | |
| 3187 | |
| 59 | 3188 <div class=hotspot id=hotspot1-1-1> |
| 32 | 3189 <p class=range> |
| 3190 <span class=range>Range 1: 961 to 976</span> | |
| 3191 </p> | |
| 3192 | |
| 3193 <table class=hotspotstable> | |
| 3194 <tr> | |
| 3195 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3196 </tr> | |
| 3197 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3198 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3199 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3200 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3201 <td>0/16 (0%)</td> |
| 32 | 3202 <td>Plus/Plus</td> |
| 3203 </tr> | |
| 3204 </table> | |
| 3205 | |
| 3206 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3207 |||||||||||||||| | |
| 3208 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3209 </div> | |
| 59 | 3210 <div class=hotspot id=hotspot1-1-2> |
| 32 | 3211 <p class=range> |
| 3212 <span class=range>Range 2: 2591 to 2598</span> | |
| 3213 </p> | |
| 3214 | |
| 3215 <table class=hotspotstable> | |
| 3216 <tr> | |
| 3217 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3218 </tr> | |
| 3219 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3220 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3221 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3222 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3223 <td>0/8 (0%)</td> |
| 32 | 3224 <td>Plus/Plus</td> |
| 3225 </tr> | |
| 3226 </table> | |
| 3227 | |
| 3228 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3229 |||||||| | |
| 3230 Subject 2591 CGTCGTGA 2598</pre> | |
| 3231 </div> | |
| 59 | 3232 <div class=hotspot id=hotspot1-1-3> |
| 32 | 3233 <p class=range> |
| 3234 <span class=range>Range 3: 839 to 845</span> | |
| 3235 </p> | |
| 3236 | |
| 3237 <table class=hotspotstable> | |
| 3238 <tr> | |
| 3239 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3240 </tr> | |
| 3241 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3242 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3243 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3244 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3245 <td>0/7 (0%)</td> |
| 32 | 3246 <td>Plus/Plus</td> |
| 3247 </tr> | |
| 3248 </table> | |
| 3249 | |
| 3250 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3251 ||||||| | |
| 3252 Subject 839 TCGTGAA 845</pre> | |
| 3253 </div> | |
| 59 | 3254 <div class=hotspot id=hotspot1-1-4> |
| 32 | 3255 <p class=range> |
| 3256 <span class=range>Range 4: 2027 to 2033</span> | |
| 3257 </p> | |
| 3258 | |
| 3259 <table class=hotspotstable> | |
| 3260 <tr> | |
| 3261 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3262 </tr> | |
| 3263 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3264 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3265 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3266 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3267 <td>0/7 (0%)</td> |
| 32 | 3268 <td>Plus/Plus</td> |
| 3269 </tr> | |
| 3270 </table> | |
| 3271 | |
| 3272 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3273 ||||||| | |
| 3274 Subject 2027 GTGAAGA 2033</pre> | |
| 3275 </div> | |
| 3276 | |
| 3277 </div> | |
| 3278 | |
| 59 | 3279 <div class=alignment id=hit1-2> |
| 3280 | |
| 3281 <div class=linkheader> | |
| 3282 <div class=right><a href="#description1-2">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3283 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5I_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3284 </div> |
| 3285 | |
| 3286 <div class=title> | |
| 3287 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)</p> | |
| 3288 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3289 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5I_A?report=genbank&log$=nuclalign">gi|557804675|pdb|3J5I|A</a> |
| 32 | 3290 <span class=b>Length:</span> 2903 |
| 3291 <span class=b>Number of Matches:</span> 4 | |
| 3292 </p> | |
| 3293 </div> | |
| 3294 | |
| 3295 | |
| 59 | 3296 <div class=hotspot id=hotspot1-2-1> |
| 32 | 3297 <p class=range> |
| 3298 <span class=range>Range 1: 961 to 976</span> | |
| 3299 </p> | |
| 3300 | |
| 3301 <table class=hotspotstable> | |
| 3302 <tr> | |
| 3303 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3304 </tr> | |
| 3305 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3306 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3307 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3308 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3309 <td>0/16 (0%)</td> |
| 32 | 3310 <td>Plus/Plus</td> |
| 3311 </tr> | |
| 3312 </table> | |
| 3313 | |
| 3314 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3315 |||||||||||||||| | |
| 3316 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3317 </div> | |
| 59 | 3318 <div class=hotspot id=hotspot1-2-2> |
| 32 | 3319 <p class=range> |
| 3320 <span class=range>Range 2: 2591 to 2598</span> | |
| 3321 </p> | |
| 3322 | |
| 3323 <table class=hotspotstable> | |
| 3324 <tr> | |
| 3325 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3326 </tr> | |
| 3327 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3328 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3329 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3330 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3331 <td>0/8 (0%)</td> |
| 32 | 3332 <td>Plus/Plus</td> |
| 3333 </tr> | |
| 3334 </table> | |
| 3335 | |
| 3336 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3337 |||||||| | |
| 3338 Subject 2591 CGTCGTGA 2598</pre> | |
| 3339 </div> | |
| 59 | 3340 <div class=hotspot id=hotspot1-2-3> |
| 32 | 3341 <p class=range> |
| 3342 <span class=range>Range 3: 839 to 845</span> | |
| 3343 </p> | |
| 3344 | |
| 3345 <table class=hotspotstable> | |
| 3346 <tr> | |
| 3347 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3348 </tr> | |
| 3349 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3350 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3351 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3352 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3353 <td>0/7 (0%)</td> |
| 32 | 3354 <td>Plus/Plus</td> |
| 3355 </tr> | |
| 3356 </table> | |
| 3357 | |
| 3358 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3359 ||||||| | |
| 3360 Subject 839 TCGTGAA 845</pre> | |
| 3361 </div> | |
| 59 | 3362 <div class=hotspot id=hotspot1-2-4> |
| 32 | 3363 <p class=range> |
| 3364 <span class=range>Range 4: 2027 to 2033</span> | |
| 3365 </p> | |
| 3366 | |
| 3367 <table class=hotspotstable> | |
| 3368 <tr> | |
| 3369 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3370 </tr> | |
| 3371 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3372 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3373 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3374 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3375 <td>0/7 (0%)</td> |
| 32 | 3376 <td>Plus/Plus</td> |
| 3377 </tr> | |
| 3378 </table> | |
| 3379 | |
| 3380 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3381 ||||||| | |
| 3382 Subject 2027 GTGAAGA 2033</pre> | |
| 3383 </div> | |
| 3384 | |
| 3385 </div> | |
| 3386 | |
| 59 | 3387 <div class=alignment id=hit1-3> |
| 3388 | |
| 3389 <div class=linkheader> | |
| 3390 <div class=right><a href="#description1-3">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3391 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5G_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3392 </div> |
| 3393 | |
| 3394 <div class=title> | |
| 3395 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)</p> | |
| 3396 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3397 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5G_A?report=genbank&log$=nuclalign">gi|557804619|pdb|3J5G|A</a> |
| 32 | 3398 <span class=b>Length:</span> 2903 |
| 3399 <span class=b>Number of Matches:</span> 4 | |
| 3400 </p> | |
| 3401 </div> | |
| 3402 | |
| 3403 | |
| 59 | 3404 <div class=hotspot id=hotspot1-3-1> |
| 32 | 3405 <p class=range> |
| 3406 <span class=range>Range 1: 961 to 976</span> | |
| 3407 </p> | |
| 3408 | |
| 3409 <table class=hotspotstable> | |
| 3410 <tr> | |
| 3411 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3412 </tr> | |
| 3413 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3414 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3415 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3416 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3417 <td>0/16 (0%)</td> |
| 32 | 3418 <td>Plus/Plus</td> |
| 3419 </tr> | |
| 3420 </table> | |
| 3421 | |
| 3422 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3423 |||||||||||||||| | |
| 3424 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3425 </div> | |
| 59 | 3426 <div class=hotspot id=hotspot1-3-2> |
| 32 | 3427 <p class=range> |
| 3428 <span class=range>Range 2: 2591 to 2598</span> | |
| 3429 </p> | |
| 3430 | |
| 3431 <table class=hotspotstable> | |
| 3432 <tr> | |
| 3433 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3434 </tr> | |
| 3435 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3436 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3437 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3438 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3439 <td>0/8 (0%)</td> |
| 32 | 3440 <td>Plus/Plus</td> |
| 3441 </tr> | |
| 3442 </table> | |
| 3443 | |
| 3444 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3445 |||||||| | |
| 3446 Subject 2591 CGTCGTGA 2598</pre> | |
| 3447 </div> | |
| 59 | 3448 <div class=hotspot id=hotspot1-3-3> |
| 32 | 3449 <p class=range> |
| 3450 <span class=range>Range 3: 839 to 845</span> | |
| 3451 </p> | |
| 3452 | |
| 3453 <table class=hotspotstable> | |
| 3454 <tr> | |
| 3455 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3456 </tr> | |
| 3457 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3458 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3459 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3460 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3461 <td>0/7 (0%)</td> |
| 32 | 3462 <td>Plus/Plus</td> |
| 3463 </tr> | |
| 3464 </table> | |
| 3465 | |
| 3466 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3467 ||||||| | |
| 3468 Subject 839 TCGTGAA 845</pre> | |
| 3469 </div> | |
| 59 | 3470 <div class=hotspot id=hotspot1-3-4> |
| 32 | 3471 <p class=range> |
| 3472 <span class=range>Range 4: 2027 to 2033</span> | |
| 3473 </p> | |
| 3474 | |
| 3475 <table class=hotspotstable> | |
| 3476 <tr> | |
| 3477 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3478 </tr> | |
| 3479 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3480 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3481 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3482 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3483 <td>0/7 (0%)</td> |
| 32 | 3484 <td>Plus/Plus</td> |
| 3485 </tr> | |
| 3486 </table> | |
| 3487 | |
| 3488 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3489 ||||||| | |
| 3490 Subject 2027 GTGAAGA 2033</pre> | |
| 3491 </div> | |
| 3492 | |
| 3493 </div> | |
| 3494 | |
| 59 | 3495 <div class=alignment id=hit1-4> |
| 3496 | |
| 3497 <div class=linkheader> | |
| 3498 <div class=right><a href="#description1-4">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3499 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5E_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3500 </div> |
| 3501 | |
| 3502 <div class=title> | |
| 3503 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)</p> | |
| 3504 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3505 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5E_A?report=genbank&log$=nuclalign">gi|557804563|pdb|3J5E|A</a> |
| 32 | 3506 <span class=b>Length:</span> 2903 |
| 3507 <span class=b>Number of Matches:</span> 4 | |
| 3508 </p> | |
| 3509 </div> | |
| 3510 | |
| 3511 | |
| 59 | 3512 <div class=hotspot id=hotspot1-4-1> |
| 32 | 3513 <p class=range> |
| 3514 <span class=range>Range 1: 961 to 976</span> | |
| 3515 </p> | |
| 3516 | |
| 3517 <table class=hotspotstable> | |
| 3518 <tr> | |
| 3519 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3520 </tr> | |
| 3521 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3522 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3523 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3524 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3525 <td>0/16 (0%)</td> |
| 32 | 3526 <td>Plus/Plus</td> |
| 3527 </tr> | |
| 3528 </table> | |
| 3529 | |
| 3530 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3531 |||||||||||||||| | |
| 3532 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3533 </div> | |
| 59 | 3534 <div class=hotspot id=hotspot1-4-2> |
| 32 | 3535 <p class=range> |
| 3536 <span class=range>Range 2: 2591 to 2598</span> | |
| 3537 </p> | |
| 3538 | |
| 3539 <table class=hotspotstable> | |
| 3540 <tr> | |
| 3541 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3542 </tr> | |
| 3543 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3544 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3545 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3546 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3547 <td>0/8 (0%)</td> |
| 32 | 3548 <td>Plus/Plus</td> |
| 3549 </tr> | |
| 3550 </table> | |
| 3551 | |
| 3552 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3553 |||||||| | |
| 3554 Subject 2591 CGTCGTGA 2598</pre> | |
| 3555 </div> | |
| 59 | 3556 <div class=hotspot id=hotspot1-4-3> |
| 32 | 3557 <p class=range> |
| 3558 <span class=range>Range 3: 839 to 845</span> | |
| 3559 </p> | |
| 3560 | |
| 3561 <table class=hotspotstable> | |
| 3562 <tr> | |
| 3563 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3564 </tr> | |
| 3565 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3566 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3567 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3568 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3569 <td>0/7 (0%)</td> |
| 32 | 3570 <td>Plus/Plus</td> |
| 3571 </tr> | |
| 3572 </table> | |
| 3573 | |
| 3574 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3575 ||||||| | |
| 3576 Subject 839 TCGTGAA 845</pre> | |
| 3577 </div> | |
| 59 | 3578 <div class=hotspot id=hotspot1-4-4> |
| 32 | 3579 <p class=range> |
| 3580 <span class=range>Range 4: 2027 to 2033</span> | |
| 3581 </p> | |
| 3582 | |
| 3583 <table class=hotspotstable> | |
| 3584 <tr> | |
| 3585 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3586 </tr> | |
| 3587 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3588 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3589 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3590 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3591 <td>0/7 (0%)</td> |
| 32 | 3592 <td>Plus/Plus</td> |
| 3593 </tr> | |
| 3594 </table> | |
| 3595 | |
| 3596 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3597 ||||||| | |
| 3598 Subject 2027 GTGAAGA 2033</pre> | |
| 3599 </div> | |
| 3600 | |
| 3601 </div> | |
| 3602 | |
| 59 | 3603 <div class=alignment id=hit1-5> |
| 3604 | |
| 3605 <div class=linkheader> | |
| 3606 <div class=right><a href="#description1-5">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3607 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5C_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3608 </div> |
| 3609 | |
| 3610 <div class=title> | |
| 3611 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)</p> | |
| 3612 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3613 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5C_A?report=genbank&log$=nuclalign">gi|557804507|pdb|3J5C|A</a> |
| 32 | 3614 <span class=b>Length:</span> 2903 |
| 3615 <span class=b>Number of Matches:</span> 4 | |
| 3616 </p> | |
| 3617 </div> | |
| 3618 | |
| 3619 | |
| 59 | 3620 <div class=hotspot id=hotspot1-5-1> |
| 32 | 3621 <p class=range> |
| 3622 <span class=range>Range 1: 961 to 976</span> | |
| 3623 </p> | |
| 3624 | |
| 3625 <table class=hotspotstable> | |
| 3626 <tr> | |
| 3627 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3628 </tr> | |
| 3629 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3630 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3631 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3632 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3633 <td>0/16 (0%)</td> |
| 32 | 3634 <td>Plus/Plus</td> |
| 3635 </tr> | |
| 3636 </table> | |
| 3637 | |
| 3638 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3639 |||||||||||||||| | |
| 3640 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3641 </div> | |
| 59 | 3642 <div class=hotspot id=hotspot1-5-2> |
| 32 | 3643 <p class=range> |
| 3644 <span class=range>Range 2: 2591 to 2598</span> | |
| 3645 </p> | |
| 3646 | |
| 3647 <table class=hotspotstable> | |
| 3648 <tr> | |
| 3649 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3650 </tr> | |
| 3651 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3652 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3653 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3654 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3655 <td>0/8 (0%)</td> |
| 32 | 3656 <td>Plus/Plus</td> |
| 3657 </tr> | |
| 3658 </table> | |
| 3659 | |
| 3660 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3661 |||||||| | |
| 3662 Subject 2591 CGTCGTGA 2598</pre> | |
| 3663 </div> | |
| 59 | 3664 <div class=hotspot id=hotspot1-5-3> |
| 32 | 3665 <p class=range> |
| 3666 <span class=range>Range 3: 839 to 845</span> | |
| 3667 </p> | |
| 3668 | |
| 3669 <table class=hotspotstable> | |
| 3670 <tr> | |
| 3671 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3672 </tr> | |
| 3673 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3674 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3675 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3676 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3677 <td>0/7 (0%)</td> |
| 32 | 3678 <td>Plus/Plus</td> |
| 3679 </tr> | |
| 3680 </table> | |
| 3681 | |
| 3682 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3683 ||||||| | |
| 3684 Subject 839 TCGTGAA 845</pre> | |
| 3685 </div> | |
| 59 | 3686 <div class=hotspot id=hotspot1-5-4> |
| 32 | 3687 <p class=range> |
| 3688 <span class=range>Range 4: 2027 to 2033</span> | |
| 3689 </p> | |
| 3690 | |
| 3691 <table class=hotspotstable> | |
| 3692 <tr> | |
| 3693 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3694 </tr> | |
| 3695 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3696 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3697 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3698 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3699 <td>0/7 (0%)</td> |
| 32 | 3700 <td>Plus/Plus</td> |
| 3701 </tr> | |
| 3702 </table> | |
| 3703 | |
| 3704 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3705 ||||||| | |
| 3706 Subject 2027 GTGAAGA 2033</pre> | |
| 3707 </div> | |
| 3708 | |
| 3709 </div> | |
| 3710 | |
| 59 | 3711 <div class=alignment id=hit1-6> |
| 3712 | |
| 3713 <div class=linkheader> | |
| 3714 <div class=right><a href="#description1-6">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3715 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5A_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3716 </div> |
| 3717 | |
| 3718 <div class=title> | |
| 3719 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)</p> | |
| 3720 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3721 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5A_A?report=genbank&log$=nuclalign">gi|557804451|pdb|3J5A|A</a> |
| 32 | 3722 <span class=b>Length:</span> 2903 |
| 3723 <span class=b>Number of Matches:</span> 4 | |
| 3724 </p> | |
| 3725 </div> | |
| 3726 | |
| 3727 | |
| 59 | 3728 <div class=hotspot id=hotspot1-6-1> |
| 32 | 3729 <p class=range> |
| 3730 <span class=range>Range 1: 961 to 976</span> | |
| 3731 </p> | |
| 3732 | |
| 3733 <table class=hotspotstable> | |
| 3734 <tr> | |
| 3735 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3736 </tr> | |
| 3737 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3738 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3739 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3740 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3741 <td>0/16 (0%)</td> |
| 32 | 3742 <td>Plus/Plus</td> |
| 3743 </tr> | |
| 3744 </table> | |
| 3745 | |
| 3746 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3747 |||||||||||||||| | |
| 3748 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3749 </div> | |
| 59 | 3750 <div class=hotspot id=hotspot1-6-2> |
| 32 | 3751 <p class=range> |
| 3752 <span class=range>Range 2: 2591 to 2598</span> | |
| 3753 </p> | |
| 3754 | |
| 3755 <table class=hotspotstable> | |
| 3756 <tr> | |
| 3757 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3758 </tr> | |
| 3759 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3760 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3761 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3762 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3763 <td>0/8 (0%)</td> |
| 32 | 3764 <td>Plus/Plus</td> |
| 3765 </tr> | |
| 3766 </table> | |
| 3767 | |
| 3768 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3769 |||||||| | |
| 3770 Subject 2591 CGTCGTGA 2598</pre> | |
| 3771 </div> | |
| 59 | 3772 <div class=hotspot id=hotspot1-6-3> |
| 32 | 3773 <p class=range> |
| 3774 <span class=range>Range 3: 839 to 845</span> | |
| 3775 </p> | |
| 3776 | |
| 3777 <table class=hotspotstable> | |
| 3778 <tr> | |
| 3779 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3780 </tr> | |
| 3781 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3782 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3783 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3784 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3785 <td>0/7 (0%)</td> |
| 32 | 3786 <td>Plus/Plus</td> |
| 3787 </tr> | |
| 3788 </table> | |
| 3789 | |
| 3790 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3791 ||||||| | |
| 3792 Subject 839 TCGTGAA 845</pre> | |
| 3793 </div> | |
| 59 | 3794 <div class=hotspot id=hotspot1-6-4> |
| 32 | 3795 <p class=range> |
| 3796 <span class=range>Range 4: 2027 to 2033</span> | |
| 3797 </p> | |
| 3798 | |
| 3799 <table class=hotspotstable> | |
| 3800 <tr> | |
| 3801 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3802 </tr> | |
| 3803 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3804 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3805 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3806 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3807 <td>0/7 (0%)</td> |
| 32 | 3808 <td>Plus/Plus</td> |
| 3809 </tr> | |
| 3810 </table> | |
| 3811 | |
| 3812 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3813 ||||||| | |
| 3814 Subject 2027 GTGAAGA 2033</pre> | |
| 3815 </div> | |
| 3816 | |
| 3817 </div> | |
| 3818 | |
| 59 | 3819 <div class=alignment id=hit1-7> |
| 3820 | |
| 3821 <div class=linkheader> | |
| 3822 <div class=right><a href="#description1-7">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3823 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J58_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3824 </div> |
| 3825 | |
| 3826 <div class=title> | |
| 3827 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)</p> | |
| 3828 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3829 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J58_A?report=genbank&log$=nuclalign">gi|557804395|pdb|3J58|A</a> |
| 32 | 3830 <span class=b>Length:</span> 2903 |
| 3831 <span class=b>Number of Matches:</span> 4 | |
| 3832 </p> | |
| 3833 </div> | |
| 3834 | |
| 3835 | |
| 59 | 3836 <div class=hotspot id=hotspot1-7-1> |
| 32 | 3837 <p class=range> |
| 3838 <span class=range>Range 1: 961 to 976</span> | |
| 3839 </p> | |
| 3840 | |
| 3841 <table class=hotspotstable> | |
| 3842 <tr> | |
| 3843 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3844 </tr> | |
| 3845 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3846 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3847 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3848 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3849 <td>0/16 (0%)</td> |
| 32 | 3850 <td>Plus/Plus</td> |
| 3851 </tr> | |
| 3852 </table> | |
| 3853 | |
| 3854 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3855 |||||||||||||||| | |
| 3856 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3857 </div> | |
| 59 | 3858 <div class=hotspot id=hotspot1-7-2> |
| 32 | 3859 <p class=range> |
| 3860 <span class=range>Range 2: 2591 to 2598</span> | |
| 3861 </p> | |
| 3862 | |
| 3863 <table class=hotspotstable> | |
| 3864 <tr> | |
| 3865 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3866 </tr> | |
| 3867 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3868 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3869 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3870 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3871 <td>0/8 (0%)</td> |
| 32 | 3872 <td>Plus/Plus</td> |
| 3873 </tr> | |
| 3874 </table> | |
| 3875 | |
| 3876 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3877 |||||||| | |
| 3878 Subject 2591 CGTCGTGA 2598</pre> | |
| 3879 </div> | |
| 59 | 3880 <div class=hotspot id=hotspot1-7-3> |
| 32 | 3881 <p class=range> |
| 3882 <span class=range>Range 3: 839 to 845</span> | |
| 3883 </p> | |
| 3884 | |
| 3885 <table class=hotspotstable> | |
| 3886 <tr> | |
| 3887 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3888 </tr> | |
| 3889 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3890 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3891 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3892 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3893 <td>0/7 (0%)</td> |
| 32 | 3894 <td>Plus/Plus</td> |
| 3895 </tr> | |
| 3896 </table> | |
| 3897 | |
| 3898 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 3899 ||||||| | |
| 3900 Subject 839 TCGTGAA 845</pre> | |
| 3901 </div> | |
| 59 | 3902 <div class=hotspot id=hotspot1-7-4> |
| 32 | 3903 <p class=range> |
| 3904 <span class=range>Range 4: 2027 to 2033</span> | |
| 3905 </p> | |
| 3906 | |
| 3907 <table class=hotspotstable> | |
| 3908 <tr> | |
| 3909 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3910 </tr> | |
| 3911 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3912 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3913 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3914 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3915 <td>0/7 (0%)</td> |
| 32 | 3916 <td>Plus/Plus</td> |
| 3917 </tr> | |
| 3918 </table> | |
| 3919 | |
| 3920 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 3921 ||||||| | |
| 3922 Subject 2027 GTGAAGA 2033</pre> | |
| 3923 </div> | |
| 3924 | |
| 3925 </div> | |
| 3926 | |
| 59 | 3927 <div class=alignment id=hit1-8> |
| 3928 | |
| 3929 <div class=linkheader> | |
| 3930 <div class=right><a href="#description1-8">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3931 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J56_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 3932 </div> |
| 3933 | |
| 3934 <div class=title> | |
| 3935 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)</p> | |
| 3936 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3937 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J56_A?report=genbank&log$=nuclalign">gi|557804339|pdb|3J56|A</a> |
| 32 | 3938 <span class=b>Length:</span> 2903 |
| 3939 <span class=b>Number of Matches:</span> 4 | |
| 3940 </p> | |
| 3941 </div> | |
| 3942 | |
| 3943 | |
| 59 | 3944 <div class=hotspot id=hotspot1-8-1> |
| 32 | 3945 <p class=range> |
| 3946 <span class=range>Range 1: 961 to 976</span> | |
| 3947 </p> | |
| 3948 | |
| 3949 <table class=hotspotstable> | |
| 3950 <tr> | |
| 3951 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3952 </tr> | |
| 3953 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3954 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3955 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3956 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3957 <td>0/16 (0%)</td> |
| 32 | 3958 <td>Plus/Plus</td> |
| 3959 </tr> | |
| 3960 </table> | |
| 3961 | |
| 3962 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 3963 |||||||||||||||| | |
| 3964 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 3965 </div> | |
| 59 | 3966 <div class=hotspot id=hotspot1-8-2> |
| 32 | 3967 <p class=range> |
| 3968 <span class=range>Range 2: 2591 to 2598</span> | |
| 3969 </p> | |
| 3970 | |
| 3971 <table class=hotspotstable> | |
| 3972 <tr> | |
| 3973 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3974 </tr> | |
| 3975 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3976 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3977 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3978 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3979 <td>0/8 (0%)</td> |
| 32 | 3980 <td>Plus/Plus</td> |
| 3981 </tr> | |
| 3982 </table> | |
| 3983 | |
| 3984 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 3985 |||||||| | |
| 3986 Subject 2591 CGTCGTGA 2598</pre> | |
| 3987 </div> | |
| 59 | 3988 <div class=hotspot id=hotspot1-8-3> |
| 32 | 3989 <p class=range> |
| 3990 <span class=range>Range 3: 839 to 845</span> | |
| 3991 </p> | |
| 3992 | |
| 3993 <table class=hotspotstable> | |
| 3994 <tr> | |
| 3995 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 3996 </tr> | |
| 3997 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3998 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
3999 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4000 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4001 <td>0/7 (0%)</td> |
| 32 | 4002 <td>Plus/Plus</td> |
| 4003 </tr> | |
| 4004 </table> | |
| 4005 | |
| 4006 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4007 ||||||| | |
| 4008 Subject 839 TCGTGAA 845</pre> | |
| 4009 </div> | |
| 59 | 4010 <div class=hotspot id=hotspot1-8-4> |
| 32 | 4011 <p class=range> |
| 4012 <span class=range>Range 4: 2027 to 2033</span> | |
| 4013 </p> | |
| 4014 | |
| 4015 <table class=hotspotstable> | |
| 4016 <tr> | |
| 4017 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4018 </tr> | |
| 4019 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4020 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4021 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4022 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4023 <td>0/7 (0%)</td> |
| 32 | 4024 <td>Plus/Plus</td> |
| 4025 </tr> | |
| 4026 </table> | |
| 4027 | |
| 4028 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4029 ||||||| | |
| 4030 Subject 2027 GTGAAGA 2033</pre> | |
| 4031 </div> | |
| 4032 | |
| 4033 </div> | |
| 4034 | |
| 59 | 4035 <div class=alignment id=hit1-9> |
| 4036 | |
| 4037 <div class=linkheader> | |
| 4038 <div class=right><a href="#description1-9">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4039 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J54_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4040 </div> |
| 4041 | |
| 4042 <div class=title> | |
| 4043 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)</p> | |
| 4044 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4045 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J54_A?report=genbank&log$=nuclalign">gi|557804283|pdb|3J54|A</a> |
| 32 | 4046 <span class=b>Length:</span> 2903 |
| 4047 <span class=b>Number of Matches:</span> 4 | |
| 4048 </p> | |
| 4049 </div> | |
| 4050 | |
| 4051 | |
| 59 | 4052 <div class=hotspot id=hotspot1-9-1> |
| 32 | 4053 <p class=range> |
| 4054 <span class=range>Range 1: 961 to 976</span> | |
| 4055 </p> | |
| 4056 | |
| 4057 <table class=hotspotstable> | |
| 4058 <tr> | |
| 4059 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4060 </tr> | |
| 4061 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4062 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4063 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4064 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4065 <td>0/16 (0%)</td> |
| 32 | 4066 <td>Plus/Plus</td> |
| 4067 </tr> | |
| 4068 </table> | |
| 4069 | |
| 4070 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4071 |||||||||||||||| | |
| 4072 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4073 </div> | |
| 59 | 4074 <div class=hotspot id=hotspot1-9-2> |
| 32 | 4075 <p class=range> |
| 4076 <span class=range>Range 2: 2591 to 2598</span> | |
| 4077 </p> | |
| 4078 | |
| 4079 <table class=hotspotstable> | |
| 4080 <tr> | |
| 4081 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4082 </tr> | |
| 4083 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4084 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4085 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4086 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4087 <td>0/8 (0%)</td> |
| 32 | 4088 <td>Plus/Plus</td> |
| 4089 </tr> | |
| 4090 </table> | |
| 4091 | |
| 4092 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4093 |||||||| | |
| 4094 Subject 2591 CGTCGTGA 2598</pre> | |
| 4095 </div> | |
| 59 | 4096 <div class=hotspot id=hotspot1-9-3> |
| 32 | 4097 <p class=range> |
| 4098 <span class=range>Range 3: 839 to 845</span> | |
| 4099 </p> | |
| 4100 | |
| 4101 <table class=hotspotstable> | |
| 4102 <tr> | |
| 4103 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4104 </tr> | |
| 4105 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4106 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4107 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4108 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4109 <td>0/7 (0%)</td> |
| 32 | 4110 <td>Plus/Plus</td> |
| 4111 </tr> | |
| 4112 </table> | |
| 4113 | |
| 4114 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4115 ||||||| | |
| 4116 Subject 839 TCGTGAA 845</pre> | |
| 4117 </div> | |
| 59 | 4118 <div class=hotspot id=hotspot1-9-4> |
| 32 | 4119 <p class=range> |
| 4120 <span class=range>Range 4: 2027 to 2033</span> | |
| 4121 </p> | |
| 4122 | |
| 4123 <table class=hotspotstable> | |
| 4124 <tr> | |
| 4125 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4126 </tr> | |
| 4127 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4128 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4129 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4130 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4131 <td>0/7 (0%)</td> |
| 32 | 4132 <td>Plus/Plus</td> |
| 4133 </tr> | |
| 4134 </table> | |
| 4135 | |
| 4136 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4137 ||||||| | |
| 4138 Subject 2027 GTGAAGA 2033</pre> | |
| 4139 </div> | |
| 4140 | |
| 4141 </div> | |
| 4142 | |
| 59 | 4143 <div class=alignment id=hit1-10> |
| 4144 | |
| 4145 <div class=linkheader> | |
| 4146 <div class=right><a href="#description1-10">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4147 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J52_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4148 </div> |
| 4149 | |
| 4150 <div class=title> | |
| 4151 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)</p> | |
| 4152 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4153 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J52_A?report=genbank&log$=nuclalign">gi|557804227|pdb|3J52|A</a> |
| 32 | 4154 <span class=b>Length:</span> 2903 |
| 4155 <span class=b>Number of Matches:</span> 4 | |
| 4156 </p> | |
| 4157 </div> | |
| 4158 | |
| 4159 | |
| 59 | 4160 <div class=hotspot id=hotspot1-10-1> |
| 32 | 4161 <p class=range> |
| 4162 <span class=range>Range 1: 961 to 976</span> | |
| 4163 </p> | |
| 4164 | |
| 4165 <table class=hotspotstable> | |
| 4166 <tr> | |
| 4167 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4168 </tr> | |
| 4169 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4170 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4171 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4172 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4173 <td>0/16 (0%)</td> |
| 32 | 4174 <td>Plus/Plus</td> |
| 4175 </tr> | |
| 4176 </table> | |
| 4177 | |
| 4178 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4179 |||||||||||||||| | |
| 4180 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4181 </div> | |
| 59 | 4182 <div class=hotspot id=hotspot1-10-2> |
| 32 | 4183 <p class=range> |
| 4184 <span class=range>Range 2: 2591 to 2598</span> | |
| 4185 </p> | |
| 4186 | |
| 4187 <table class=hotspotstable> | |
| 4188 <tr> | |
| 4189 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4190 </tr> | |
| 4191 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4192 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4193 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4194 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4195 <td>0/8 (0%)</td> |
| 32 | 4196 <td>Plus/Plus</td> |
| 4197 </tr> | |
| 4198 </table> | |
| 4199 | |
| 4200 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4201 |||||||| | |
| 4202 Subject 2591 CGTCGTGA 2598</pre> | |
| 4203 </div> | |
| 59 | 4204 <div class=hotspot id=hotspot1-10-3> |
| 32 | 4205 <p class=range> |
| 4206 <span class=range>Range 3: 839 to 845</span> | |
| 4207 </p> | |
| 4208 | |
| 4209 <table class=hotspotstable> | |
| 4210 <tr> | |
| 4211 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4212 </tr> | |
| 4213 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4214 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4215 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4216 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4217 <td>0/7 (0%)</td> |
| 32 | 4218 <td>Plus/Plus</td> |
| 4219 </tr> | |
| 4220 </table> | |
| 4221 | |
| 4222 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4223 ||||||| | |
| 4224 Subject 839 TCGTGAA 845</pre> | |
| 4225 </div> | |
| 59 | 4226 <div class=hotspot id=hotspot1-10-4> |
| 32 | 4227 <p class=range> |
| 4228 <span class=range>Range 4: 2027 to 2033</span> | |
| 4229 </p> | |
| 4230 | |
| 4231 <table class=hotspotstable> | |
| 4232 <tr> | |
| 4233 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4234 </tr> | |
| 4235 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4236 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4237 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4238 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4239 <td>0/7 (0%)</td> |
| 32 | 4240 <td>Plus/Plus</td> |
| 4241 </tr> | |
| 4242 </table> | |
| 4243 | |
| 4244 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4245 ||||||| | |
| 4246 Subject 2027 GTGAAGA 2033</pre> | |
| 4247 </div> | |
| 4248 | |
| 4249 </div> | |
| 4250 | |
| 59 | 4251 <div class=alignment id=hit1-11> |
| 4252 | |
| 4253 <div class=linkheader> | |
| 4254 <div class=right><a href="#description1-11">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4255 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J51_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4256 </div> |
| 4257 | |
| 4258 <div class=title> | |
| 4259 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)</p> | |
| 4260 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4261 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J51_A?report=genbank&log$=nuclalign">gi|557804195|pdb|3J51|A</a> |
| 32 | 4262 <span class=b>Length:</span> 2903 |
| 4263 <span class=b>Number of Matches:</span> 4 | |
| 4264 </p> | |
| 4265 </div> | |
| 4266 | |
| 4267 | |
| 59 | 4268 <div class=hotspot id=hotspot1-11-1> |
| 32 | 4269 <p class=range> |
| 4270 <span class=range>Range 1: 961 to 976</span> | |
| 4271 </p> | |
| 4272 | |
| 4273 <table class=hotspotstable> | |
| 4274 <tr> | |
| 4275 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4276 </tr> | |
| 4277 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4278 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4279 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4280 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4281 <td>0/16 (0%)</td> |
| 32 | 4282 <td>Plus/Plus</td> |
| 4283 </tr> | |
| 4284 </table> | |
| 4285 | |
| 4286 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4287 |||||||||||||||| | |
| 4288 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4289 </div> | |
| 59 | 4290 <div class=hotspot id=hotspot1-11-2> |
| 32 | 4291 <p class=range> |
| 4292 <span class=range>Range 2: 2591 to 2598</span> | |
| 4293 </p> | |
| 4294 | |
| 4295 <table class=hotspotstable> | |
| 4296 <tr> | |
| 4297 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4298 </tr> | |
| 4299 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4300 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4301 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4302 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4303 <td>0/8 (0%)</td> |
| 32 | 4304 <td>Plus/Plus</td> |
| 4305 </tr> | |
| 4306 </table> | |
| 4307 | |
| 4308 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4309 |||||||| | |
| 4310 Subject 2591 CGTCGTGA 2598</pre> | |
| 4311 </div> | |
| 59 | 4312 <div class=hotspot id=hotspot1-11-3> |
| 32 | 4313 <p class=range> |
| 4314 <span class=range>Range 3: 839 to 845</span> | |
| 4315 </p> | |
| 4316 | |
| 4317 <table class=hotspotstable> | |
| 4318 <tr> | |
| 4319 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4320 </tr> | |
| 4321 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4322 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4323 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4324 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4325 <td>0/7 (0%)</td> |
| 32 | 4326 <td>Plus/Plus</td> |
| 4327 </tr> | |
| 4328 </table> | |
| 4329 | |
| 4330 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4331 ||||||| | |
| 4332 Subject 839 TCGTGAA 845</pre> | |
| 4333 </div> | |
| 59 | 4334 <div class=hotspot id=hotspot1-11-4> |
| 32 | 4335 <p class=range> |
| 4336 <span class=range>Range 4: 2027 to 2033</span> | |
| 4337 </p> | |
| 4338 | |
| 4339 <table class=hotspotstable> | |
| 4340 <tr> | |
| 4341 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4342 </tr> | |
| 4343 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4344 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4345 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4346 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4347 <td>0/7 (0%)</td> |
| 32 | 4348 <td>Plus/Plus</td> |
| 4349 </tr> | |
| 4350 </table> | |
| 4351 | |
| 4352 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4353 ||||||| | |
| 4354 Subject 2027 GTGAAGA 2033</pre> | |
| 4355 </div> | |
| 4356 | |
| 4357 </div> | |
| 4358 | |
| 59 | 4359 <div class=alignment id=hit1-12> |
| 4360 | |
| 4361 <div class=linkheader> | |
| 4362 <div class=right><a href="#description1-12">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4363 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J50_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4364 </div> |
| 4365 | |
| 4366 <div class=title> | |
| 4367 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)</p> | |
| 4368 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4369 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J50_A?report=genbank&log$=nuclalign">gi|557804163|pdb|3J50|A</a> |
| 32 | 4370 <span class=b>Length:</span> 2903 |
| 4371 <span class=b>Number of Matches:</span> 4 | |
| 4372 </p> | |
| 4373 </div> | |
| 4374 | |
| 4375 | |
| 59 | 4376 <div class=hotspot id=hotspot1-12-1> |
| 32 | 4377 <p class=range> |
| 4378 <span class=range>Range 1: 961 to 976</span> | |
| 4379 </p> | |
| 4380 | |
| 4381 <table class=hotspotstable> | |
| 4382 <tr> | |
| 4383 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4384 </tr> | |
| 4385 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4386 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4387 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4388 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4389 <td>0/16 (0%)</td> |
| 32 | 4390 <td>Plus/Plus</td> |
| 4391 </tr> | |
| 4392 </table> | |
| 4393 | |
| 4394 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4395 |||||||||||||||| | |
| 4396 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4397 </div> | |
| 59 | 4398 <div class=hotspot id=hotspot1-12-2> |
| 32 | 4399 <p class=range> |
| 4400 <span class=range>Range 2: 2591 to 2598</span> | |
| 4401 </p> | |
| 4402 | |
| 4403 <table class=hotspotstable> | |
| 4404 <tr> | |
| 4405 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4406 </tr> | |
| 4407 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4408 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4409 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4410 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4411 <td>0/8 (0%)</td> |
| 32 | 4412 <td>Plus/Plus</td> |
| 4413 </tr> | |
| 4414 </table> | |
| 4415 | |
| 4416 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4417 |||||||| | |
| 4418 Subject 2591 CGTCGTGA 2598</pre> | |
| 4419 </div> | |
| 59 | 4420 <div class=hotspot id=hotspot1-12-3> |
| 32 | 4421 <p class=range> |
| 4422 <span class=range>Range 3: 839 to 845</span> | |
| 4423 </p> | |
| 4424 | |
| 4425 <table class=hotspotstable> | |
| 4426 <tr> | |
| 4427 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4428 </tr> | |
| 4429 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4430 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4431 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4432 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4433 <td>0/7 (0%)</td> |
| 32 | 4434 <td>Plus/Plus</td> |
| 4435 </tr> | |
| 4436 </table> | |
| 4437 | |
| 4438 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4439 ||||||| | |
| 4440 Subject 839 TCGTGAA 845</pre> | |
| 4441 </div> | |
| 59 | 4442 <div class=hotspot id=hotspot1-12-4> |
| 32 | 4443 <p class=range> |
| 4444 <span class=range>Range 4: 2027 to 2033</span> | |
| 4445 </p> | |
| 4446 | |
| 4447 <table class=hotspotstable> | |
| 4448 <tr> | |
| 4449 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4450 </tr> | |
| 4451 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4452 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4453 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4454 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4455 <td>0/7 (0%)</td> |
| 32 | 4456 <td>Plus/Plus</td> |
| 4457 </tr> | |
| 4458 </table> | |
| 4459 | |
| 4460 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4461 ||||||| | |
| 4462 Subject 2027 GTGAAGA 2033</pre> | |
| 4463 </div> | |
| 4464 | |
| 4465 </div> | |
| 4466 | |
| 59 | 4467 <div class=alignment id=hit1-13> |
| 4468 | |
| 4469 <div class=linkheader> | |
| 4470 <div class=right><a href="#description1-13">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4471 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J4X_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4472 </div> |
| 4473 | |
| 4474 <div class=title> | |
| 4475 <p class=hittitle>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)</p> | |
| 4476 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4477 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J4X_A?report=genbank&log$=nuclalign">gi|557804083|pdb|3J4X|A</a> |
| 32 | 4478 <span class=b>Length:</span> 2903 |
| 4479 <span class=b>Number of Matches:</span> 4 | |
| 4480 </p> | |
| 4481 </div> | |
| 4482 | |
| 4483 | |
| 59 | 4484 <div class=hotspot id=hotspot1-13-1> |
| 32 | 4485 <p class=range> |
| 4486 <span class=range>Range 1: 961 to 976</span> | |
| 4487 </p> | |
| 4488 | |
| 4489 <table class=hotspotstable> | |
| 4490 <tr> | |
| 4491 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4492 </tr> | |
| 4493 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4494 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4495 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4496 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4497 <td>0/16 (0%)</td> |
| 32 | 4498 <td>Plus/Plus</td> |
| 4499 </tr> | |
| 4500 </table> | |
| 4501 | |
| 4502 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4503 |||||||||||||||| | |
| 4504 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4505 </div> | |
| 59 | 4506 <div class=hotspot id=hotspot1-13-2> |
| 32 | 4507 <p class=range> |
| 4508 <span class=range>Range 2: 2591 to 2598</span> | |
| 4509 </p> | |
| 4510 | |
| 4511 <table class=hotspotstable> | |
| 4512 <tr> | |
| 4513 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4514 </tr> | |
| 4515 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4516 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4517 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4518 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4519 <td>0/8 (0%)</td> |
| 32 | 4520 <td>Plus/Plus</td> |
| 4521 </tr> | |
| 4522 </table> | |
| 4523 | |
| 4524 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4525 |||||||| | |
| 4526 Subject 2591 CGTCGTGA 2598</pre> | |
| 4527 </div> | |
| 59 | 4528 <div class=hotspot id=hotspot1-13-3> |
| 32 | 4529 <p class=range> |
| 4530 <span class=range>Range 3: 839 to 845</span> | |
| 4531 </p> | |
| 4532 | |
| 4533 <table class=hotspotstable> | |
| 4534 <tr> | |
| 4535 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4536 </tr> | |
| 4537 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4538 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4539 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4540 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4541 <td>0/7 (0%)</td> |
| 32 | 4542 <td>Plus/Plus</td> |
| 4543 </tr> | |
| 4544 </table> | |
| 4545 | |
| 4546 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4547 ||||||| | |
| 4548 Subject 839 TCGTGAA 845</pre> | |
| 4549 </div> | |
| 59 | 4550 <div class=hotspot id=hotspot1-13-4> |
| 32 | 4551 <p class=range> |
| 4552 <span class=range>Range 4: 2027 to 2033</span> | |
| 4553 </p> | |
| 4554 | |
| 4555 <table class=hotspotstable> | |
| 4556 <tr> | |
| 4557 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4558 </tr> | |
| 4559 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4560 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4561 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4562 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4563 <td>0/7 (0%)</td> |
| 32 | 4564 <td>Plus/Plus</td> |
| 4565 </tr> | |
| 4566 </table> | |
| 4567 | |
| 4568 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 4569 ||||||| | |
| 4570 Subject 2027 GTGAAGA 2033</pre> | |
| 4571 </div> | |
| 4572 | |
| 4573 </div> | |
| 4574 | |
| 59 | 4575 <div class=alignment id=hit1-14> |
| 4576 | |
| 4577 <div class=linkheader> | |
| 4578 <div class=right><a href="#description1-14">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4579 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J37_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4580 </div> |
| 4581 | |
| 4582 <div class=title> | |
| 4583 <p class=hittitle>Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome</p> | |
| 4584 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4585 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J37_A?report=genbank&log$=nuclalign">gi|474452808|pdb|3J37|A</a> |
| 32 | 4586 <span class=b>Length:</span> 2904 |
| 4587 <span class=b>Number of Matches:</span> 3 | |
| 4588 </p> | |
| 4589 </div> | |
| 4590 | |
| 4591 | |
| 59 | 4592 <div class=hotspot id=hotspot1-14-1> |
| 32 | 4593 <p class=range> |
| 4594 <span class=range>Range 1: 961 to 976</span> | |
| 4595 </p> | |
| 4596 | |
| 4597 <table class=hotspotstable> | |
| 4598 <tr> | |
| 4599 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4600 </tr> | |
| 4601 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4602 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4603 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4604 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4605 <td>0/16 (0%)</td> |
| 32 | 4606 <td>Plus/Plus</td> |
| 4607 </tr> | |
| 4608 </table> | |
| 4609 | |
| 4610 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4611 |||||||||||||||| | |
| 4612 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4613 </div> | |
| 59 | 4614 <div class=hotspot id=hotspot1-14-2> |
| 32 | 4615 <p class=range> |
| 4616 <span class=range>Range 2: 2591 to 2598</span> | |
| 4617 </p> | |
| 4618 | |
| 4619 <table class=hotspotstable> | |
| 4620 <tr> | |
| 4621 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4622 </tr> | |
| 4623 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4624 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4625 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4626 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4627 <td>0/8 (0%)</td> |
| 32 | 4628 <td>Plus/Plus</td> |
| 4629 </tr> | |
| 4630 </table> | |
| 4631 | |
| 4632 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4633 |||||||| | |
| 4634 Subject 2591 CGTCGTGA 2598</pre> | |
| 4635 </div> | |
| 59 | 4636 <div class=hotspot id=hotspot1-14-3> |
| 32 | 4637 <p class=range> |
| 4638 <span class=range>Range 3: 839 to 845</span> | |
| 4639 </p> | |
| 4640 | |
| 4641 <table class=hotspotstable> | |
| 4642 <tr> | |
| 4643 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4644 </tr> | |
| 4645 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4646 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4647 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4648 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4649 <td>0/7 (0%)</td> |
| 32 | 4650 <td>Plus/Plus</td> |
| 4651 </tr> | |
| 4652 </table> | |
| 4653 | |
| 4654 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4655 ||||||| | |
| 4656 Subject 839 TCGTGAA 845</pre> | |
| 4657 </div> | |
| 4658 | |
| 4659 </div> | |
| 4660 | |
| 59 | 4661 <div class=alignment id=hit1-15> |
| 4662 | |
| 4663 <div class=linkheader> | |
| 4664 <div class=right><a href="#description1-15">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4665 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZT_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4666 </div> |
| 4667 | |
| 4668 <div class=title> | |
| 4669 <p class=hittitle>Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. </p> | |
| 4670 <p class=titleinfo> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4671 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZT_B?report=genbank&log$=nuclalign">gi|326634210|pdb|3IZT|B</a> |
| 32 | 4672 <span class=b>Length:</span> 2904 |
| 4673 <span class=b>Number of Matches:</span> 3 | |
| 4674 </p> | |
| 4675 </div> | |
| 4676 | |
| 59 | 4677 <a class=showmoretitles onclick="toggle_visibility('moretitles1-15'); return false;" href=''> |
| 32 | 4678 See 7 more title(s) |
| 4679 </a> | |
| 4680 | |
| 59 | 4681 <div class=moretitles id=moretitles1-15 style="display: none"> |
| 32 | 4682 <div class=title> |
| 4683 <p class=hittitle>Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon </p> | |
| 4684 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4685 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|326634243|pdb|3IZU|B</a> |
| 32 | 4686 </p> |
| 4687 </div> | |
| 4688 <div class=title> | |
| 4689 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class2 Of The Six Classes) </p> | |
| 4690 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4691 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380763703|pdb|3J0T|B</a> |
| 32 | 4692 </p> |
| 4693 </div> | |
| 4694 <div class=title> | |
| 4695 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4a Of The Six Classes) </p> | |
| 4696 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4697 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380763785|pdb|3J0W|B</a> |
| 32 | 4698 </p> |
| 4699 </div> | |
| 4700 <div class=title> | |
| 4701 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4b Of The Six Classes) </p> | |
| 4702 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4703 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380763843|pdb|3J0Y|B</a> |
| 32 | 4704 </p> |
| 4705 </div> | |
| 4706 <div class=title> | |
| 4707 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 3 Of The Six Classes) </p> | |
| 4708 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4709 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380763925|pdb|3J11|B</a> |
| 32 | 4710 </p> |
| 4711 </div> | |
| 4712 <div class=title> | |
| 4713 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 5 Of The Six Classes) </p> | |
| 4714 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4715 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380763959|pdb|3J12|B</a> |
| 32 | 4716 </p> |
| 4717 </div> | |
| 4718 <div class=title> | |
| 4719 <p class=hittitle>Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 6 Of The Six Classes)</p> | |
| 4720 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4721 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|380764016|pdb|3J14|B</a> |
| 32 | 4722 </p> |
| 4723 </div> | |
| 4724 </div> | |
| 4725 | |
| 59 | 4726 <div class=hotspot id=hotspot1-15-1> |
| 32 | 4727 <p class=range> |
| 4728 <span class=range>Range 1: 961 to 976</span> | |
| 4729 </p> | |
| 4730 | |
| 4731 <table class=hotspotstable> | |
| 4732 <tr> | |
| 4733 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4734 </tr> | |
| 4735 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4736 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4737 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4738 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4739 <td>0/16 (0%)</td> |
| 32 | 4740 <td>Plus/Plus</td> |
| 4741 </tr> | |
| 4742 </table> | |
| 4743 | |
| 4744 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4745 |||||||||||||||| | |
| 4746 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4747 </div> | |
| 59 | 4748 <div class=hotspot id=hotspot1-15-2> |
| 32 | 4749 <p class=range> |
| 4750 <span class=range>Range 2: 2591 to 2598</span> | |
| 4751 </p> | |
| 4752 | |
| 4753 <table class=hotspotstable> | |
| 4754 <tr> | |
| 4755 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4756 </tr> | |
| 4757 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4758 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4759 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4760 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4761 <td>0/8 (0%)</td> |
| 32 | 4762 <td>Plus/Plus</td> |
| 4763 </tr> | |
| 4764 </table> | |
| 4765 | |
| 4766 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4767 |||||||| | |
| 4768 Subject 2591 CGTCGTGA 2598</pre> | |
| 4769 </div> | |
| 59 | 4770 <div class=hotspot id=hotspot1-15-3> |
| 32 | 4771 <p class=range> |
| 4772 <span class=range>Range 3: 839 to 845</span> | |
| 4773 </p> | |
| 4774 | |
| 4775 <table class=hotspotstable> | |
| 4776 <tr> | |
| 4777 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4778 </tr> | |
| 4779 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4780 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4781 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4782 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4783 <td>0/7 (0%)</td> |
| 32 | 4784 <td>Plus/Plus</td> |
| 4785 </tr> | |
| 4786 </table> | |
| 4787 | |
| 4788 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4789 ||||||| | |
| 4790 Subject 839 TCGTGAA 845</pre> | |
| 4791 </div> | |
| 4792 | |
| 4793 </div> | |
| 4794 | |
| 59 | 4795 <div class=alignment id=hit1-16> |
| 4796 | |
| 4797 <div class=linkheader> | |
| 4798 <div class=right><a href="#description1-16">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4799 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3FIK_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 4800 </div> |
| 4801 | |
| 4802 <div class=title> | |
| 4803 <p class=hittitle>Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. </p> | |
| 4804 <p class=titleinfo> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4805 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3FIK_B?report=genbank&log$=nuclalign">gi|224510767|pdb|3FIK|B</a> |
| 32 | 4806 <span class=b>Length:</span> 2903 |
| 4807 <span class=b>Number of Matches:</span> 4 | |
| 4808 </p> | |
| 4809 </div> | |
| 4810 | |
| 59 | 4811 <a class=showmoretitles onclick="toggle_visibility('moretitles1-16'); return false;" href=''> |
| 32 | 4812 See 19 more title(s) |
| 4813 </a> | |
| 4814 | |
| 59 | 4815 <div class=moretitles id=moretitles1-16 style="display: none"> |
| 32 | 4816 <div class=title> |
| 4817 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4818 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4819 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097373|pdb|3I1N|A</a> |
| 32 | 4820 </p> |
| 4821 </div> | |
| 4822 <div class=title> | |
| 4823 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4824 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4825 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097425|pdb|3I1P|A</a> |
| 32 | 4826 </p> |
| 4827 </div> | |
| 4828 <div class=title> | |
| 4829 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4830 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4831 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097479|pdb|3I1R|A</a> |
| 32 | 4832 </p> |
| 4833 </div> | |
| 4834 <div class=title> | |
| 4835 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4836 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4837 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097533|pdb|3I1T|A</a> |
| 32 | 4838 </p> |
| 4839 </div> | |
| 4840 <div class=title> | |
| 4841 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4842 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4843 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097588|pdb|3I20|A</a> |
| 32 | 4844 </p> |
| 4845 </div> | |
| 4846 <div class=title> | |
| 4847 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting </p> | |
| 4848 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4849 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|257097643|pdb|3I22|A</a> |
| 32 | 4850 </p> |
| 4851 </div> | |
| 4852 <div class=title> | |
| 4853 <p class=hittitle>Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). </p> | |
| 4854 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
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114
diff
changeset
|
4855 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|294662251|pdb|2WWQ|B</a> |
| 32 | 4856 </p> |
| 4857 </div> | |
| 4858 <div class=title> | |
| 4859 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. </p> | |
| 4860 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4861 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|309320065|pdb|3OFC|A</a> |
| 32 | 4862 </p> |
| 4863 </div> | |
| 4864 <div class=title> | |
| 4865 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. </p> | |
| 4866 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4867 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|309320169|pdb|3OFZ|A</a> |
| 32 | 4868 </p> |
| 4869 </div> | |
| 4870 <div class=title> | |
| 4871 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. </p> | |
| 4872 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4873 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|309320200|pdb|3OG0|A</a> |
| 32 | 4874 </p> |
| 4875 </div> | |
| 4876 <div class=title> | |
| 4877 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. </p> | |
| 4878 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4879 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|315113654|pdb|3OAS|A</a> |
| 32 | 4880 </p> |
| 4881 </div> | |
| 4882 <div class=title> | |
| 4883 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. </p> | |
| 4884 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4885 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|315113685|pdb|3OAT|A</a> |
| 32 | 4886 </p> |
| 4887 </div> | |
| 4888 <div class=title> | |
| 4889 <p class=hittitle>Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding </p> | |
| 4890 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4891 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|334359437|pdb|3R8S|A</a> |
| 32 | 4892 </p> |
| 4893 </div> | |
| 4894 <div class=title> | |
| 4895 <p class=hittitle>Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding </p> | |
| 4896 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4897 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|334359468|pdb|3R8T|A</a> |
| 32 | 4898 </p> |
| 4899 </div> | |
| 4900 <div class=title> | |
| 4901 <p class=hittitle>Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome </p> | |
| 4902 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4903 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|371927526|pdb|3SGF|A</a> |
| 32 | 4904 </p> |
| 4905 </div> | |
| 4906 <div class=title> | |
| 4907 <p class=hittitle>Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome (Without Viomycin) </p> | |
| 4908 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4909 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|371927651|pdb|3UOS|A</a> |
| 32 | 4910 </p> |
| 4911 </div> | |
| 4912 <div class=title> | |
| 4913 <p class=hittitle>Chain A, Structure Of The Bacterial Ribosome Complexed By Tmrna-Smpb And Ef-G During Translocation And Mld-Loading (50s Subunit) </p> | |
| 4914 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4915 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|386783121|pdb|3J19|A</a> |
| 32 | 4916 </p> |
| 4917 </div> | |
| 4918 <div class=title> | |
| 4919 <p class=hittitle>Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna Structure, 50s Subunit) </p> | |
| 4920 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4921 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|567754995|pdb|3J5U|A</a> |
| 32 | 4922 </p> |
| 4923 </div> | |
| 4924 <div class=title> | |
| 4925 <p class=hittitle>Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna*ef-g Structure, 50s Subunit)</p> | |
| 4926 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4927 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|567755029|pdb|3J5W|A</a> |
| 32 | 4928 </p> |
| 4929 </div> | |
| 4930 </div> | |
| 4931 | |
| 59 | 4932 <div class=hotspot id=hotspot1-16-1> |
| 32 | 4933 <p class=range> |
| 4934 <span class=range>Range 1: 961 to 976</span> | |
| 4935 </p> | |
| 4936 | |
| 4937 <table class=hotspotstable> | |
| 4938 <tr> | |
| 4939 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4940 </tr> | |
| 4941 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4942 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4943 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4944 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4945 <td>0/16 (0%)</td> |
| 32 | 4946 <td>Plus/Plus</td> |
| 4947 </tr> | |
| 4948 </table> | |
| 4949 | |
| 4950 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 4951 |||||||||||||||| | |
| 4952 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 4953 </div> | |
| 59 | 4954 <div class=hotspot id=hotspot1-16-2> |
| 32 | 4955 <p class=range> |
| 4956 <span class=range>Range 2: 2591 to 2598</span> | |
| 4957 </p> | |
| 4958 | |
| 4959 <table class=hotspotstable> | |
| 4960 <tr> | |
| 4961 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4962 </tr> | |
| 4963 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4964 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4965 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4966 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4967 <td>0/8 (0%)</td> |
| 32 | 4968 <td>Plus/Plus</td> |
| 4969 </tr> | |
| 4970 </table> | |
| 4971 | |
| 4972 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 4973 |||||||| | |
| 4974 Subject 2591 CGTCGTGA 2598</pre> | |
| 4975 </div> | |
| 59 | 4976 <div class=hotspot id=hotspot1-16-3> |
| 32 | 4977 <p class=range> |
| 4978 <span class=range>Range 3: 839 to 845</span> | |
| 4979 </p> | |
| 4980 | |
| 4981 <table class=hotspotstable> | |
| 4982 <tr> | |
| 4983 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 4984 </tr> | |
| 4985 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4986 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4987 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4988 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
4989 <td>0/7 (0%)</td> |
| 32 | 4990 <td>Plus/Plus</td> |
| 4991 </tr> | |
| 4992 </table> | |
| 4993 | |
| 4994 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 4995 ||||||| | |
| 4996 Subject 839 TCGTGAA 845</pre> | |
| 4997 </div> | |
| 59 | 4998 <div class=hotspot id=hotspot1-16-4> |
| 32 | 4999 <p class=range> |
| 5000 <span class=range>Range 4: 2027 to 2033</span> | |
| 5001 </p> | |
| 5002 | |
| 5003 <table class=hotspotstable> | |
| 5004 <tr> | |
| 5005 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5006 </tr> | |
| 5007 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5008 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5009 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5010 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5011 <td>0/7 (0%)</td> |
| 32 | 5012 <td>Plus/Plus</td> |
| 5013 </tr> | |
| 5014 </table> | |
| 5015 | |
| 5016 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5017 ||||||| | |
| 5018 Subject 2027 GTGAAGA 2033</pre> | |
| 5019 </div> | |
| 5020 | |
| 5021 </div> | |
| 5022 | |
| 59 | 5023 <div class=alignment id=hit1-17> |
| 5024 | |
| 5025 <div class=linkheader> | |
| 5026 <div class=right><a href="#description1-17">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5027 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3E1B_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5028 </div> |
| 5029 | |
| 5030 <div class=title> | |
| 5031 <p class=hittitle>Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State </p> | |
| 5032 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5033 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3E1B_B?report=genbank&log$=nuclalign">gi|256032374|pdb|3E1B|B</a> |
| 32 | 5034 <span class=b>Length:</span> 2903 |
| 5035 <span class=b>Number of Matches:</span> 4 | |
| 5036 </p> | |
| 5037 </div> | |
| 5038 | |
| 59 | 5039 <a class=showmoretitles onclick="toggle_visibility('moretitles1-17'); return false;" href=''> |
| 32 | 5040 See 1 more title(s) |
| 5041 </a> | |
| 5042 | |
| 59 | 5043 <div class=moretitles id=moretitles1-17 style="display: none"> |
| 32 | 5044 <div class=title> |
| 5045 <p class=hittitle>Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Post-Accommodation State</p> | |
| 5046 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5047 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|256032431|pdb|3E1D|B</a> |
| 32 | 5048 </p> |
| 5049 </div> | |
| 5050 </div> | |
| 5051 | |
| 59 | 5052 <div class=hotspot id=hotspot1-17-1> |
| 32 | 5053 <p class=range> |
| 5054 <span class=range>Range 1: 961 to 976</span> | |
| 5055 </p> | |
| 5056 | |
| 5057 <table class=hotspotstable> | |
| 5058 <tr> | |
| 5059 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5060 </tr> | |
| 5061 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5062 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5063 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5064 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5065 <td>0/16 (0%)</td> |
| 32 | 5066 <td>Plus/Plus</td> |
| 5067 </tr> | |
| 5068 </table> | |
| 5069 | |
| 5070 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5071 |||||||||||||||| | |
| 5072 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 5073 </div> | |
| 59 | 5074 <div class=hotspot id=hotspot1-17-2> |
| 32 | 5075 <p class=range> |
| 5076 <span class=range>Range 2: 2591 to 2598</span> | |
| 5077 </p> | |
| 5078 | |
| 5079 <table class=hotspotstable> | |
| 5080 <tr> | |
| 5081 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5082 </tr> | |
| 5083 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5084 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5085 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5086 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5087 <td>0/8 (0%)</td> |
| 32 | 5088 <td>Plus/Plus</td> |
| 5089 </tr> | |
| 5090 </table> | |
| 5091 | |
| 5092 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5093 |||||||| | |
| 5094 Subject 2591 CGTCGTGA 2598</pre> | |
| 5095 </div> | |
| 59 | 5096 <div class=hotspot id=hotspot1-17-3> |
| 32 | 5097 <p class=range> |
| 5098 <span class=range>Range 3: 839 to 845</span> | |
| 5099 </p> | |
| 5100 | |
| 5101 <table class=hotspotstable> | |
| 5102 <tr> | |
| 5103 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5104 </tr> | |
| 5105 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5106 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5107 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5108 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5109 <td>0/7 (0%)</td> |
| 32 | 5110 <td>Plus/Plus</td> |
| 5111 </tr> | |
| 5112 </table> | |
| 5113 | |
| 5114 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5115 ||||||| | |
| 5116 Subject 839 TCGTGAA 845</pre> | |
| 5117 </div> | |
| 59 | 5118 <div class=hotspot id=hotspot1-17-4> |
| 32 | 5119 <p class=range> |
| 5120 <span class=range>Range 4: 2027 to 2033</span> | |
| 5121 </p> | |
| 5122 | |
| 5123 <table class=hotspotstable> | |
| 5124 <tr> | |
| 5125 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5126 </tr> | |
| 5127 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5128 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5129 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5130 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5131 <td>0/7 (0%)</td> |
| 32 | 5132 <td>Plus/Plus</td> |
| 5133 </tr> | |
| 5134 </table> | |
| 5135 | |
| 5136 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5137 ||||||| | |
| 5138 Subject 2027 GTGAAGA 2033</pre> | |
| 5139 </div> | |
| 5140 | |
| 5141 </div> | |
| 5142 | |
| 59 | 5143 <div class=alignment id=hit1-18> |
| 5144 | |
| 5145 <div class=linkheader> | |
| 5146 <div class=right><a href="#description1-18">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5147 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYC_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5148 </div> |
| 5149 | |
| 5150 <div class=title> | |
| 5151 <p class=hittitle>Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143</p> | |
| 5152 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5153 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYC_0?report=genbank&log$=nuclalign">gi|157883716|pdb|2GYC|0</a> |
| 32 | 5154 <span class=b>Length:</span> 2740 |
| 5155 <span class=b>Number of Matches:</span> 4 | |
| 5156 </p> | |
| 5157 </div> | |
| 5158 | |
| 5159 | |
| 59 | 5160 <div class=hotspot id=hotspot1-18-1> |
| 32 | 5161 <p class=range> |
| 5162 <span class=range>Range 1: 889 to 904</span> | |
| 5163 </p> | |
| 5164 | |
| 5165 <table class=hotspotstable> | |
| 5166 <tr> | |
| 5167 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5168 </tr> | |
| 5169 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5170 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5171 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5172 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5173 <td>0/16 (0%)</td> |
| 32 | 5174 <td>Plus/Plus</td> |
| 5175 </tr> | |
| 5176 </table> | |
| 5177 | |
| 5178 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5179 |||||||||||||||| | |
| 5180 Subject 889 CGTCCGTCGTGAAGAG 904</pre> | |
| 5181 </div> | |
| 59 | 5182 <div class=hotspot id=hotspot1-18-2> |
| 32 | 5183 <p class=range> |
| 5184 <span class=range>Range 2: 2453 to 2460</span> | |
| 5185 </p> | |
| 5186 | |
| 5187 <table class=hotspotstable> | |
| 5188 <tr> | |
| 5189 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5190 </tr> | |
| 5191 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5192 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5193 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5194 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5195 <td>0/8 (0%)</td> |
| 32 | 5196 <td>Plus/Plus</td> |
| 5197 </tr> | |
| 5198 </table> | |
| 5199 | |
| 5200 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5201 |||||||| | |
| 5202 Subject 2453 CGTCGTGA 2460</pre> | |
| 5203 </div> | |
| 59 | 5204 <div class=hotspot id=hotspot1-18-3> |
| 32 | 5205 <p class=range> |
| 5206 <span class=range>Range 3: 776 to 782</span> | |
| 5207 </p> | |
| 5208 | |
| 5209 <table class=hotspotstable> | |
| 5210 <tr> | |
| 5211 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5212 </tr> | |
| 5213 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5214 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5215 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5216 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5217 <td>0/7 (0%)</td> |
| 32 | 5218 <td>Plus/Plus</td> |
| 5219 </tr> | |
| 5220 </table> | |
| 5221 | |
| 5222 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5223 ||||||| | |
| 5224 Subject 776 TCGTGAA 782</pre> | |
| 5225 </div> | |
| 59 | 5226 <div class=hotspot id=hotspot1-18-4> |
| 32 | 5227 <p class=range> |
| 5228 <span class=range>Range 4: 1910 to 1916</span> | |
| 5229 </p> | |
| 5230 | |
| 5231 <table class=hotspotstable> | |
| 5232 <tr> | |
| 5233 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5234 </tr> | |
| 5235 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5236 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5237 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5238 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5239 <td>0/7 (0%)</td> |
| 32 | 5240 <td>Plus/Plus</td> |
| 5241 </tr> | |
| 5242 </table> | |
| 5243 | |
| 5244 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5245 ||||||| | |
| 5246 Subject 1910 GTGAAGA 1916</pre> | |
| 5247 </div> | |
| 5248 | |
| 5249 </div> | |
| 5250 | |
| 59 | 5251 <div class=alignment id=hit1-19> |
| 5252 | |
| 5253 <div class=linkheader> | |
| 5254 <div class=right><a href="#description1-19">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5255 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYA_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5256 </div> |
| 5257 | |
| 5258 <div class=title> | |
| 5259 <p class=hittitle>Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056</p> | |
| 5260 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5261 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2GYA_0?report=genbank&log$=nuclalign">gi|157883710|pdb|2GYA|0</a> |
| 32 | 5262 <span class=b>Length:</span> 2740 |
| 5263 <span class=b>Number of Matches:</span> 4 | |
| 5264 </p> | |
| 5265 </div> | |
| 5266 | |
| 5267 | |
| 59 | 5268 <div class=hotspot id=hotspot1-19-1> |
| 32 | 5269 <p class=range> |
| 5270 <span class=range>Range 1: 889 to 904</span> | |
| 5271 </p> | |
| 5272 | |
| 5273 <table class=hotspotstable> | |
| 5274 <tr> | |
| 5275 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5276 </tr> | |
| 5277 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5278 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5279 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5280 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5281 <td>0/16 (0%)</td> |
| 32 | 5282 <td>Plus/Plus</td> |
| 5283 </tr> | |
| 5284 </table> | |
| 5285 | |
| 5286 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5287 |||||||||||||||| | |
| 5288 Subject 889 CGTCCGTCGTGAAGAG 904</pre> | |
| 5289 </div> | |
| 59 | 5290 <div class=hotspot id=hotspot1-19-2> |
| 32 | 5291 <p class=range> |
| 5292 <span class=range>Range 2: 2453 to 2460</span> | |
| 5293 </p> | |
| 5294 | |
| 5295 <table class=hotspotstable> | |
| 5296 <tr> | |
| 5297 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5298 </tr> | |
| 5299 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5300 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5301 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5302 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5303 <td>0/8 (0%)</td> |
| 32 | 5304 <td>Plus/Plus</td> |
| 5305 </tr> | |
| 5306 </table> | |
| 5307 | |
| 5308 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5309 |||||||| | |
| 5310 Subject 2453 CGTCGTGA 2460</pre> | |
| 5311 </div> | |
| 59 | 5312 <div class=hotspot id=hotspot1-19-3> |
| 32 | 5313 <p class=range> |
| 5314 <span class=range>Range 3: 776 to 782</span> | |
| 5315 </p> | |
| 5316 | |
| 5317 <table class=hotspotstable> | |
| 5318 <tr> | |
| 5319 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5320 </tr> | |
| 5321 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5322 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5323 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5324 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5325 <td>0/7 (0%)</td> |
| 32 | 5326 <td>Plus/Plus</td> |
| 5327 </tr> | |
| 5328 </table> | |
| 5329 | |
| 5330 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5331 ||||||| | |
| 5332 Subject 776 TCGTGAA 782</pre> | |
| 5333 </div> | |
| 59 | 5334 <div class=hotspot id=hotspot1-19-4> |
| 32 | 5335 <p class=range> |
| 5336 <span class=range>Range 4: 1910 to 1916</span> | |
| 5337 </p> | |
| 5338 | |
| 5339 <table class=hotspotstable> | |
| 5340 <tr> | |
| 5341 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5342 </tr> | |
| 5343 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5344 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5345 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5346 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5347 <td>0/7 (0%)</td> |
| 32 | 5348 <td>Plus/Plus</td> |
| 5349 </tr> | |
| 5350 </table> | |
| 5351 | |
| 5352 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5353 ||||||| | |
| 5354 Subject 1910 GTGAAGA 1916</pre> | |
| 5355 </div> | |
| 5356 | |
| 5357 </div> | |
| 5358 | |
| 59 | 5359 <div class=alignment id=hit1-20> |
| 5360 | |
| 5361 <div class=linkheader> | |
| 5362 <div class=right><a href="#description1-20">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5363 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2I2V_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5364 </div> |
| 5365 | |
| 5366 <div class=title> | |
| 5367 <p class=hittitle>Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.</p> | |
| 5368 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5369 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2I2V_B?report=genbank&log$=nuclalign">gi|122922257|pdb|2I2V|B</a> |
| 32 | 5370 <span class=b>Length:</span> 2904 |
| 5371 <span class=b>Number of Matches:</span> 4 | |
| 5372 </p> | |
| 5373 </div> | |
| 5374 | |
| 5375 | |
| 59 | 5376 <div class=hotspot id=hotspot1-20-1> |
| 32 | 5377 <p class=range> |
| 5378 <span class=range>Range 1: 961 to 976</span> | |
| 5379 </p> | |
| 5380 | |
| 5381 <table class=hotspotstable> | |
| 5382 <tr> | |
| 5383 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5384 </tr> | |
| 5385 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5386 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5387 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5388 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5389 <td>0/16 (0%)</td> |
| 32 | 5390 <td>Plus/Plus</td> |
| 5391 </tr> | |
| 5392 </table> | |
| 5393 | |
| 5394 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5395 |||||||||||||||| | |
| 5396 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 5397 </div> | |
| 59 | 5398 <div class=hotspot id=hotspot1-20-2> |
| 32 | 5399 <p class=range> |
| 5400 <span class=range>Range 2: 2591 to 2598</span> | |
| 5401 </p> | |
| 5402 | |
| 5403 <table class=hotspotstable> | |
| 5404 <tr> | |
| 5405 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5406 </tr> | |
| 5407 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5408 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5409 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5410 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5411 <td>0/8 (0%)</td> |
| 32 | 5412 <td>Plus/Plus</td> |
| 5413 </tr> | |
| 5414 </table> | |
| 5415 | |
| 5416 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5417 |||||||| | |
| 5418 Subject 2591 CGTCGTGA 2598</pre> | |
| 5419 </div> | |
| 59 | 5420 <div class=hotspot id=hotspot1-20-3> |
| 32 | 5421 <p class=range> |
| 5422 <span class=range>Range 3: 839 to 845</span> | |
| 5423 </p> | |
| 5424 | |
| 5425 <table class=hotspotstable> | |
| 5426 <tr> | |
| 5427 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5428 </tr> | |
| 5429 <tr> | |
|
118
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|
5430 <td>14.3694 bits (7)</td> |
|
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|
5431 <td>185.82</td> |
|
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|
5432 <td>7/7 (100%)</td> |
|
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diff
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|
5433 <td>0/7 (0%)</td> |
| 32 | 5434 <td>Plus/Plus</td> |
| 5435 </tr> | |
| 5436 </table> | |
| 5437 | |
| 5438 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5439 ||||||| | |
| 5440 Subject 839 TCGTGAA 845</pre> | |
| 5441 </div> | |
| 59 | 5442 <div class=hotspot id=hotspot1-20-4> |
| 32 | 5443 <p class=range> |
| 5444 <span class=range>Range 4: 2027 to 2033</span> | |
| 5445 </p> | |
| 5446 | |
| 5447 <table class=hotspotstable> | |
| 5448 <tr> | |
| 5449 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5450 </tr> | |
| 5451 <tr> | |
|
118
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diff
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|
5452 <td>14.3694 bits (7)</td> |
|
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diff
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|
5453 <td>185.82</td> |
|
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diff
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|
5454 <td>7/7 (100%)</td> |
|
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|
5455 <td>0/7 (0%)</td> |
| 32 | 5456 <td>Plus/Plus</td> |
| 5457 </tr> | |
| 5458 </table> | |
| 5459 | |
| 5460 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5461 ||||||| | |
| 5462 Subject 2027 GTGAAGA 2033</pre> | |
| 5463 </div> | |
| 5464 | |
| 5465 </div> | |
| 5466 | |
| 59 | 5467 <div class=alignment id=hit1-21> |
| 5468 | |
| 5469 <div class=linkheader> | |
| 5470 <div class=right><a href="#description1-21">Descriptions</a></div> | |
|
118
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|
5471 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AW4_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5472 </div> |
| 5473 | |
| 5474 <div class=title> | |
| 5475 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5476 <p class=titleinfo> | |
|
118
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|
5477 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AW4_B?report=genbank&log$=nuclalign">gi|83754062|pdb|2AW4|B</a> |
| 32 | 5478 <span class=b>Length:</span> 2904 |
| 5479 <span class=b>Number of Matches:</span> 4 | |
| 5480 </p> | |
| 5481 </div> | |
| 5482 | |
| 59 | 5483 <a class=showmoretitles onclick="toggle_visibility('moretitles1-21'); return false;" href=''> |
| 32 | 5484 See 38 more title(s) |
| 5485 </a> | |
| 5486 | |
| 59 | 5487 <div class=moretitles id=moretitles1-21 style="display: none"> |
| 32 | 5488 <div class=title> |
| 5489 <p class=hittitle>Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5490 <p class=titleinfo> | |
|
118
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|
5491 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|122922241|pdb|2I2T|B</a> |
| 32 | 5492 </p> |
| 5493 </div> | |
| 5494 <div class=title> | |
| 5495 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5496 <p class=titleinfo> | |
|
118
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|
5497 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157836046|pdb|2QOV|B</a> |
| 32 | 5498 </p> |
| 5499 </div> | |
| 5500 <div class=title> | |
| 5501 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5502 <p class=titleinfo> | |
|
118
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|
5503 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157836098|pdb|2QOX|B</a> |
| 32 | 5504 </p> |
| 5505 </div> | |
| 5506 <div class=title> | |
| 5507 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5508 <p class=titleinfo> | |
|
118
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|
5509 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157836150|pdb|2QOZ|B</a> |
| 32 | 5510 </p> |
| 5511 </div> | |
| 5512 <div class=title> | |
| 5513 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5514 <p class=titleinfo> | |
|
118
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|
5515 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157836202|pdb|2QP1|B</a> |
| 32 | 5516 </p> |
| 5517 </div> | |
| 5518 <div class=title> | |
| 5519 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5520 <p class=titleinfo> | |
|
118
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|
5521 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429721|pdb|2QAM|B</a> |
| 32 | 5522 </p> |
| 5523 </div> | |
| 5524 <div class=title> | |
| 5525 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5526 <p class=titleinfo> | |
|
118
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diff
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|
5527 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429773|pdb|2QAO|B</a> |
| 32 | 5528 </p> |
| 5529 </div> | |
| 5530 <div class=title> | |
| 5531 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5532 <p class=titleinfo> | |
|
118
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diff
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|
5533 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429831|pdb|2QBA|B</a> |
| 32 | 5534 </p> |
| 5535 </div> | |
| 5536 <div class=title> | |
| 5537 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5538 <p class=titleinfo> | |
|
118
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|
5539 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429883|pdb|2QBC|B</a> |
| 32 | 5540 </p> |
| 5541 </div> | |
| 5542 <div class=title> | |
| 5543 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5544 <p class=titleinfo> | |
|
118
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|
5545 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429935|pdb|2QBE|B</a> |
| 32 | 5546 </p> |
| 5547 </div> | |
| 5548 <div class=title> | |
| 5549 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5550 <p class=titleinfo> | |
|
118
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|
5551 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158429988|pdb|2QBG|B</a> |
| 32 | 5552 </p> |
| 5553 </div> | |
| 5554 <div class=title> | |
| 5555 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5556 <p class=titleinfo> | |
|
118
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|
5557 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158430041|pdb|2QBI|B</a> |
| 32 | 5558 </p> |
| 5559 </div> | |
| 5560 <div class=title> | |
| 5561 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5562 <p class=titleinfo> | |
|
118
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|
5563 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158430094|pdb|2QBK|B</a> |
| 32 | 5564 </p> |
| 5565 </div> | |
| 5566 <div class=title> | |
| 5567 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5568 <p class=titleinfo> | |
|
118
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diff
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|
5569 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158431394|pdb|2Z4L|B</a> |
| 32 | 5570 </p> |
| 5571 </div> | |
| 5572 <div class=title> | |
| 5573 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5574 <p class=titleinfo> | |
|
118
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diff
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|
5575 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|158431447|pdb|2Z4N|B</a> |
| 32 | 5576 </p> |
| 5577 </div> | |
| 5578 <div class=title> | |
| 5579 <p class=hittitle>Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) </p> | |
| 5580 <p class=titleinfo> | |
|
118
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diff
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|
5581 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|168988732|pdb|2VHM|B</a> |
| 32 | 5582 </p> |
| 5583 </div> | |
| 5584 <div class=title> | |
| 5585 <p class=hittitle>Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) </p> | |
| 5586 <p class=titleinfo> | |
|
118
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diff
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|
5587 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|168988763|pdb|2VHN|B</a> |
| 32 | 5588 </p> |
| 5589 </div> | |
| 5590 <div class=title> | |
| 5591 <p class=hittitle>Chain B, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound </p> | |
| 5592 <p class=titleinfo> | |
|
118
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diff
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|
5593 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|169404603|pdb|2RDO|B</a> |
| 32 | 5594 </p> |
| 5595 </div> | |
| 5596 <div class=title> | |
| 5597 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5598 <p class=titleinfo> | |
|
118
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|
5599 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|197107301|pdb|3DF2|B</a> |
| 32 | 5600 </p> |
| 5601 </div> | |
| 5602 <div class=title> | |
| 5603 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. </p> | |
| 5604 <p class=titleinfo> | |
|
118
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|
5605 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|197107353|pdb|3DF4|B</a> |
| 32 | 5606 </p> |
| 5607 </div> | |
| 5608 <div class=title> | |
| 5609 <p class=hittitle>Chain 8, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 </p> | |
| 5610 <p class=titleinfo> | |
|
118
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|
5611 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|290560329|pdb|3KCR|8</a> |
| 32 | 5612 </p> |
| 5613 </div> | |
| 5614 <div class=title> | |
| 5615 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. </p> | |
| 5616 <p class=titleinfo> | |
|
118
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|
5617 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|308198729|pdb|3ORB|A</a> |
| 32 | 5618 </p> |
| 5619 </div> | |
| 5620 <div class=title> | |
| 5621 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. </p> | |
| 5622 <p class=titleinfo> | |
|
118
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diff
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|
5623 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|308388007|pdb|3OFQ|A</a> |
| 32 | 5624 </p> |
| 5625 </div> | |
| 5626 <div class=title> | |
| 5627 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. </p> | |
| 5628 <p class=titleinfo> | |
|
118
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|
5629 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|308388038|pdb|3OFR|A</a> |
| 32 | 5630 </p> |
| 5631 </div> | |
| 5632 <div class=title> | |
| 5633 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. </p> | |
| 5634 <p class=titleinfo> | |
|
118
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|
5635 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|309320096|pdb|3OFD|A</a> |
| 32 | 5636 </p> |
| 5637 </div> | |
| 5638 <div class=title> | |
| 5639 <p class=hittitle>Chain 8, Structure Of The Ribosome-Secye Complex In The Membrane Environment </p> | |
| 5640 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5641 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|329666014|pdb|3J01|8</a> |
| 32 | 5642 </p> |
| 5643 </div> | |
| 5644 <div class=title> | |
| 5645 <p class=hittitle>Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics </p> | |
| 5646 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5647 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|402550607|pdb|4GAR|A</a> |
| 32 | 5648 </p> |
| 5649 </div> | |
| 5650 <div class=title> | |
| 5651 <p class=hittitle>Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics </p> | |
| 5652 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5653 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|402550662|pdb|4GAU|A</a> |
| 32 | 5654 </p> |
| 5655 </div> | |
| 5656 <div class=title> | |
| 5657 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5658 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5659 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934273|pdb|4KIX|A</a> |
| 32 | 5660 </p> |
| 5661 </div> | |
| 5662 <div class=title> | |
| 5663 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5664 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5665 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934341|pdb|4KIZ|A</a> |
| 32 | 5666 </p> |
| 5667 </div> | |
| 5668 <div class=title> | |
| 5669 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5670 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5671 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934404|pdb|4KJ1|A</a> |
| 32 | 5672 </p> |
| 5673 </div> | |
| 5674 <div class=title> | |
| 5675 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5676 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5677 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934483|pdb|4KJ3|A</a> |
| 32 | 5678 </p> |
| 5679 </div> | |
| 5680 <div class=title> | |
| 5681 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5682 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5683 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934551|pdb|4KJ5|A</a> |
| 32 | 5684 </p> |
| 5685 </div> | |
| 5686 <div class=title> | |
| 5687 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5688 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5689 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934613|pdb|4KJ7|A</a> |
| 32 | 5690 </p> |
| 5691 </div> | |
| 5692 <div class=title> | |
| 5693 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5694 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5695 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934678|pdb|4KJ9|A</a> |
| 32 | 5696 </p> |
| 5697 </div> | |
| 5698 <div class=title> | |
| 5699 <p class=hittitle>Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G </p> | |
| 5700 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5701 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|524934740|pdb|4KJB|A</a> |
| 32 | 5702 </p> |
| 5703 </div> | |
| 5704 <div class=title> | |
| 5705 <p class=hittitle>Chain A, Visualization Of Two Trnas Trapped In Transit During Ef-g-mediated Translocation (50s Subunit) </p> | |
| 5706 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5707 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|564730763|pdb|3J5O|A</a> |
| 32 | 5708 </p> |
| 5709 </div> | |
| 5710 <div class=title> | |
| 5711 <p class=hittitle>Chain A, Structure Of The E. Coli 50s Subunit With Ermbl Nascent Chain</p> | |
| 5712 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5713 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|597959819|pdb|3J5L|A</a> |
| 32 | 5714 </p> |
| 5715 </div> | |
| 5716 </div> | |
| 5717 | |
| 59 | 5718 <div class=hotspot id=hotspot1-21-1> |
| 32 | 5719 <p class=range> |
| 5720 <span class=range>Range 1: 961 to 976</span> | |
| 5721 </p> | |
| 5722 | |
| 5723 <table class=hotspotstable> | |
| 5724 <tr> | |
| 5725 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5726 </tr> | |
| 5727 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5728 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5729 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5730 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5731 <td>0/16 (0%)</td> |
| 32 | 5732 <td>Plus/Plus</td> |
| 5733 </tr> | |
| 5734 </table> | |
| 5735 | |
| 5736 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5737 |||||||||||||||| | |
| 5738 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 5739 </div> | |
| 59 | 5740 <div class=hotspot id=hotspot1-21-2> |
| 32 | 5741 <p class=range> |
| 5742 <span class=range>Range 2: 2591 to 2598</span> | |
| 5743 </p> | |
| 5744 | |
| 5745 <table class=hotspotstable> | |
| 5746 <tr> | |
| 5747 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5748 </tr> | |
| 5749 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5750 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5751 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5752 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5753 <td>0/8 (0%)</td> |
| 32 | 5754 <td>Plus/Plus</td> |
| 5755 </tr> | |
| 5756 </table> | |
| 5757 | |
| 5758 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5759 |||||||| | |
| 5760 Subject 2591 CGTCGTGA 2598</pre> | |
| 5761 </div> | |
| 59 | 5762 <div class=hotspot id=hotspot1-21-3> |
| 32 | 5763 <p class=range> |
| 5764 <span class=range>Range 3: 839 to 845</span> | |
| 5765 </p> | |
| 5766 | |
| 5767 <table class=hotspotstable> | |
| 5768 <tr> | |
| 5769 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5770 </tr> | |
| 5771 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5772 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5773 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5774 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5775 <td>0/7 (0%)</td> |
| 32 | 5776 <td>Plus/Plus</td> |
| 5777 </tr> | |
| 5778 </table> | |
| 5779 | |
| 5780 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5781 ||||||| | |
| 5782 Subject 839 TCGTGAA 845</pre> | |
| 5783 </div> | |
| 59 | 5784 <div class=hotspot id=hotspot1-21-4> |
| 32 | 5785 <p class=range> |
| 5786 <span class=range>Range 4: 2027 to 2033</span> | |
| 5787 </p> | |
| 5788 | |
| 5789 <table class=hotspotstable> | |
| 5790 <tr> | |
| 5791 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5792 </tr> | |
| 5793 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5794 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5795 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5796 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5797 <td>0/7 (0%)</td> |
| 32 | 5798 <td>Plus/Plus</td> |
| 5799 </tr> | |
| 5800 </table> | |
| 5801 | |
| 5802 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5803 ||||||| | |
| 5804 Subject 2027 GTGAAGA 2033</pre> | |
| 5805 </div> | |
| 5806 | |
| 5807 </div> | |
| 5808 | |
| 59 | 5809 <div class=alignment id=hit1-22> |
| 5810 | |
| 5811 <div class=linkheader> | |
| 5812 <div class=right><a href="#description1-22">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5813 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AWB_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5814 </div> |
| 5815 | |
| 5816 <div class=title> | |
| 5817 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5818 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5819 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2AWB_B?report=genbank&log$=nuclalign">gi|83754118|pdb|2AWB|B</a> |
| 32 | 5820 <span class=b>Length:</span> 2904 |
| 5821 <span class=b>Number of Matches:</span> 4 | |
| 5822 </p> | |
| 5823 </div> | |
| 5824 | |
| 59 | 5825 <a class=showmoretitles onclick="toggle_visibility('moretitles1-22'); return false;" href=''> |
| 32 | 5826 See 2 more title(s) |
| 5827 </a> | |
| 5828 | |
| 59 | 5829 <div class=moretitles id=moretitles1-22 style="display: none"> |
| 32 | 5830 <div class=title> |
| 5831 <p class=hittitle>Chain B, Model Of E. Coli Srp Bound To 70s Rncs </p> | |
| 5832 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5833 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|126031747|pdb|2J28|B</a> |
| 32 | 5834 </p> |
| 5835 </div> | |
| 5836 <div class=title> | |
| 5837 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.</p> | |
| 5838 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5839 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157880574|pdb|1VS8|B</a> |
| 32 | 5840 </p> |
| 5841 </div> | |
| 5842 </div> | |
| 5843 | |
| 59 | 5844 <div class=hotspot id=hotspot1-22-1> |
| 32 | 5845 <p class=range> |
| 5846 <span class=range>Range 1: 961 to 976</span> | |
| 5847 </p> | |
| 5848 | |
| 5849 <table class=hotspotstable> | |
| 5850 <tr> | |
| 5851 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5852 </tr> | |
| 5853 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5854 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5855 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5856 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5857 <td>0/16 (0%)</td> |
| 32 | 5858 <td>Plus/Plus</td> |
| 5859 </tr> | |
| 5860 </table> | |
| 5861 | |
| 5862 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 5863 |||||||||||||||| | |
| 5864 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 5865 </div> | |
| 59 | 5866 <div class=hotspot id=hotspot1-22-2> |
| 32 | 5867 <p class=range> |
| 5868 <span class=range>Range 2: 2591 to 2598</span> | |
| 5869 </p> | |
| 5870 | |
| 5871 <table class=hotspotstable> | |
| 5872 <tr> | |
| 5873 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5874 </tr> | |
| 5875 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5876 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5877 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5878 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5879 <td>0/8 (0%)</td> |
| 32 | 5880 <td>Plus/Plus</td> |
| 5881 </tr> | |
| 5882 </table> | |
| 5883 | |
| 5884 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 5885 |||||||| | |
| 5886 Subject 2591 CGTCGTGA 2598</pre> | |
| 5887 </div> | |
| 59 | 5888 <div class=hotspot id=hotspot1-22-3> |
| 32 | 5889 <p class=range> |
| 5890 <span class=range>Range 3: 839 to 845</span> | |
| 5891 </p> | |
| 5892 | |
| 5893 <table class=hotspotstable> | |
| 5894 <tr> | |
| 5895 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5896 </tr> | |
| 5897 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5898 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5899 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5900 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5901 <td>0/7 (0%)</td> |
| 32 | 5902 <td>Plus/Plus</td> |
| 5903 </tr> | |
| 5904 </table> | |
| 5905 | |
| 5906 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 5907 ||||||| | |
| 5908 Subject 839 TCGTGAA 845</pre> | |
| 5909 </div> | |
| 59 | 5910 <div class=hotspot id=hotspot1-22-4> |
| 32 | 5911 <p class=range> |
| 5912 <span class=range>Range 4: 2027 to 2033</span> | |
| 5913 </p> | |
| 5914 | |
| 5915 <table class=hotspotstable> | |
| 5916 <tr> | |
| 5917 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 5918 </tr> | |
| 5919 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5920 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5921 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5922 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5923 <td>0/7 (0%)</td> |
| 32 | 5924 <td>Plus/Plus</td> |
| 5925 </tr> | |
| 5926 </table> | |
| 5927 | |
| 5928 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 5929 ||||||| | |
| 5930 Subject 2027 GTGAAGA 2033</pre> | |
| 5931 </div> | |
| 5932 | |
| 5933 </div> | |
| 5934 | |
| 59 | 5935 <div class=alignment id=hit1-23> |
| 5936 | |
| 5937 <div class=linkheader> | |
| 5938 <div class=right><a href="#description1-23">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5939 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1VS6_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 5940 </div> |
| 5941 | |
| 5942 <div class=title> | |
| 5943 <p class=hittitle>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. </p> | |
| 5944 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5945 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1VS6_B?report=genbank&log$=nuclalign">gi|157880571|pdb|1VS6|B</a> |
| 32 | 5946 <span class=b>Length:</span> 2904 |
| 5947 <span class=b>Number of Matches:</span> 4 | |
| 5948 </p> | |
| 5949 </div> | |
| 5950 | |
| 59 | 5951 <a class=showmoretitles onclick="toggle_visibility('moretitles1-23'); return false;" href=''> |
| 32 | 5952 See 6 more title(s) |
| 5953 </a> | |
| 5954 | |
| 59 | 5955 <div class=moretitles id=moretitles1-23 style="display: none"> |
| 32 | 5956 <div class=title> |
| 5957 <p class=hittitle>Chain B, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex </p> | |
| 5958 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5959 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|209870354|pdb|3BBX|B</a> |
| 32 | 5960 </p> |
| 5961 </div> | |
| 5962 <div class=title> | |
| 5963 <p class=hittitle>Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Ef-G-Bound Translocation Complex </p> | |
| 5964 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5965 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|222447037|pdb|3DG0|B</a> |
| 32 | 5966 </p> |
| 5967 </div> | |
| 5968 <div class=title> | |
| 5969 <p class=hittitle>Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of A Pretranslocation Complex </p> | |
| 5970 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5971 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|222447039|pdb|3DG2|B</a> |
| 32 | 5972 </p> |
| 5973 </div> | |
| 5974 <div class=title> | |
| 5975 <p class=hittitle>Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Rf1-Bound Termination Complex </p> | |
| 5976 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5977 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|222447041|pdb|3DG4|B</a> |
| 32 | 5978 </p> |
| 5979 </div> | |
| 5980 <div class=title> | |
| 5981 <p class=hittitle>Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Rf3-Bound Termination Complex </p> | |
| 5982 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5983 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|222447043|pdb|3DG5|B</a> |
| 32 | 5984 </p> |
| 5985 </div> | |
| 5986 <div class=title> | |
| 5987 <p class=hittitle>Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome.</p> | |
| 5988 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
5989 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|308198355|pdb|1VT2|A</a> |
| 32 | 5990 </p> |
| 5991 </div> | |
| 5992 </div> | |
| 5993 | |
| 59 | 5994 <div class=hotspot id=hotspot1-23-1> |
| 32 | 5995 <p class=range> |
| 5996 <span class=range>Range 1: 961 to 976</span> | |
| 5997 </p> | |
| 5998 | |
| 5999 <table class=hotspotstable> | |
| 6000 <tr> | |
| 6001 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6002 </tr> | |
| 6003 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6004 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6005 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6006 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6007 <td>0/16 (0%)</td> |
| 32 | 6008 <td>Plus/Plus</td> |
| 6009 </tr> | |
| 6010 </table> | |
| 6011 | |
| 6012 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 6013 |||||||||||||||| | |
| 6014 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 6015 </div> | |
| 59 | 6016 <div class=hotspot id=hotspot1-23-2> |
| 32 | 6017 <p class=range> |
| 6018 <span class=range>Range 2: 2591 to 2598</span> | |
| 6019 </p> | |
| 6020 | |
| 6021 <table class=hotspotstable> | |
| 6022 <tr> | |
| 6023 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6024 </tr> | |
| 6025 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6026 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6027 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6028 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6029 <td>0/8 (0%)</td> |
| 32 | 6030 <td>Plus/Plus</td> |
| 6031 </tr> | |
| 6032 </table> | |
| 6033 | |
| 6034 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 6035 |||||||| | |
| 6036 Subject 2591 CGTCGTGA 2598</pre> | |
| 6037 </div> | |
| 59 | 6038 <div class=hotspot id=hotspot1-23-3> |
| 32 | 6039 <p class=range> |
| 6040 <span class=range>Range 3: 839 to 845</span> | |
| 6041 </p> | |
| 6042 | |
| 6043 <table class=hotspotstable> | |
| 6044 <tr> | |
| 6045 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6046 </tr> | |
| 6047 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6048 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6049 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6050 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6051 <td>0/7 (0%)</td> |
| 32 | 6052 <td>Plus/Plus</td> |
| 6053 </tr> | |
| 6054 </table> | |
| 6055 | |
| 6056 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 6057 ||||||| | |
| 6058 Subject 839 TCGTGAA 845</pre> | |
| 6059 </div> | |
| 59 | 6060 <div class=hotspot id=hotspot1-23-4> |
| 32 | 6061 <p class=range> |
| 6062 <span class=range>Range 4: 2027 to 2033</span> | |
| 6063 </p> | |
| 6064 | |
| 6065 <table class=hotspotstable> | |
| 6066 <tr> | |
| 6067 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6068 </tr> | |
| 6069 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6070 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6071 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6072 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6073 <td>0/7 (0%)</td> |
| 32 | 6074 <td>Plus/Plus</td> |
| 6075 </tr> | |
| 6076 </table> | |
| 6077 | |
| 6078 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6079 ||||||| | |
| 6080 Subject 2027 GTGAAGA 2033</pre> | |
| 6081 </div> | |
| 6082 | |
| 6083 </div> | |
| 6084 | |
| 59 | 6085 <div class=alignment id=hit1-24> |
| 6086 | |
| 6087 <div class=linkheader> | |
| 6088 <div class=right><a href="#description1-24">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6089 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1P85_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6090 </div> |
| 6091 | |
| 6092 <div class=title> | |
| 6093 <p class=hittitle>Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome </p> | |
| 6094 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6095 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1P85_0?report=genbank&log$=nuclalign">gi|33357900|pdb|1P85|0</a> |
| 32 | 6096 <span class=b>Length:</span> 2904 |
| 6097 <span class=b>Number of Matches:</span> 4 | |
| 6098 </p> | |
| 6099 </div> | |
| 6100 | |
| 59 | 6101 <a class=showmoretitles onclick="toggle_visibility('moretitles1-24'); return false;" href=''> |
| 32 | 6102 See 1 more title(s) |
| 6103 </a> | |
| 6104 | |
| 59 | 6105 <div class=moretitles id=moretitles1-24 style="display: none"> |
| 32 | 6106 <div class=title> |
| 6107 <p class=hittitle>Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome</p> | |
| 6108 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6109 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|33357927|pdb|1P86|0</a> |
| 32 | 6110 </p> |
| 6111 </div> | |
| 6112 </div> | |
| 6113 | |
| 59 | 6114 <div class=hotspot id=hotspot1-24-1> |
| 32 | 6115 <p class=range> |
| 6116 <span class=range>Range 1: 961 to 976</span> | |
| 6117 </p> | |
| 6118 | |
| 6119 <table class=hotspotstable> | |
| 6120 <tr> | |
| 6121 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6122 </tr> | |
| 6123 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6124 <td>32.2105 bits (16)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6125 <td>0.000791334</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6126 <td>16/16 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6127 <td>0/16 (0%)</td> |
| 32 | 6128 <td>Plus/Plus</td> |
| 6129 </tr> | |
| 6130 </table> | |
| 6131 | |
| 6132 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAAGAG 16 | |
| 6133 |||||||||||||||| | |
| 6134 Subject 961 CGTCCGTCGTGAAGAG 976</pre> | |
| 6135 </div> | |
| 59 | 6136 <div class=hotspot id=hotspot1-24-2> |
| 32 | 6137 <p class=range> |
| 6138 <span class=range>Range 2: 2591 to 2598</span> | |
| 6139 </p> | |
| 6140 | |
| 6141 <table class=hotspotstable> | |
| 6142 <tr> | |
| 6143 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6144 </tr> | |
| 6145 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6146 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6147 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6148 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6149 <td>0/8 (0%)</td> |
| 32 | 6150 <td>Plus/Plus</td> |
| 6151 </tr> | |
| 6152 </table> | |
| 6153 | |
| 6154 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 6155 |||||||| | |
| 6156 Subject 2591 CGTCGTGA 2598</pre> | |
| 6157 </div> | |
| 59 | 6158 <div class=hotspot id=hotspot1-24-3> |
| 32 | 6159 <p class=range> |
| 6160 <span class=range>Range 3: 839 to 845</span> | |
| 6161 </p> | |
| 6162 | |
| 6163 <table class=hotspotstable> | |
| 6164 <tr> | |
| 6165 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6166 </tr> | |
| 6167 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6168 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6169 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6170 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6171 <td>0/7 (0%)</td> |
| 32 | 6172 <td>Plus/Plus</td> |
| 6173 </tr> | |
| 6174 </table> | |
| 6175 | |
| 6176 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 6177 ||||||| | |
| 6178 Subject 839 TCGTGAA 845</pre> | |
| 6179 </div> | |
| 59 | 6180 <div class=hotspot id=hotspot1-24-4> |
| 32 | 6181 <p class=range> |
| 6182 <span class=range>Range 4: 2027 to 2033</span> | |
| 6183 </p> | |
| 6184 | |
| 6185 <table class=hotspotstable> | |
| 6186 <tr> | |
| 6187 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6188 </tr> | |
| 6189 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6190 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6191 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6192 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6193 <td>0/7 (0%)</td> |
| 32 | 6194 <td>Plus/Plus</td> |
| 6195 </tr> | |
| 6196 </table> | |
| 6197 | |
| 6198 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6199 ||||||| | |
| 6200 Subject 2027 GTGAAGA 2033</pre> | |
| 6201 </div> | |
| 6202 | |
| 6203 </div> | |
| 6204 | |
| 59 | 6205 <div class=alignment id=hit1-25> |
| 6206 | |
| 6207 <div class=linkheader> | |
| 6208 <div class=right><a href="#description1-25">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6209 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6210 </div> |
| 6211 | |
| 6212 <div class=title> | |
| 6213 <p class=hittitle>Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution</p> | |
| 6214 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6215 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&log$=nuclalign">gi|7767146|pdb|1C2W|B</a> |
| 32 | 6216 <span class=b>Length:</span> 2904 |
| 6217 <span class=b>Number of Matches:</span> 2 | |
| 6218 </p> | |
| 6219 </div> | |
| 6220 | |
| 6221 | |
| 59 | 6222 <div class=hotspot id=hotspot1-25-1> |
| 32 | 6223 <p class=range> |
| 6224 <span class=range>Range 1: 961 to 973</span> | |
| 6225 </p> | |
| 6226 | |
| 6227 <table class=hotspotstable> | |
| 6228 <tr> | |
| 6229 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6230 </tr> | |
| 6231 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6232 <td>26.2635 bits (13)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6233 <td>0.0488207</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6234 <td>13/13 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6235 <td>0/13 (0%)</td> |
| 32 | 6236 <td>Plus/Plus</td> |
| 6237 </tr> | |
| 6238 </table> | |
| 6239 | |
| 6240 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAA 13 | |
| 6241 ||||||||||||| | |
| 6242 Subject 961 CGTCCGTCGTGAA 973</pre> | |
| 6243 </div> | |
| 59 | 6244 <div class=hotspot id=hotspot1-25-2> |
| 32 | 6245 <p class=range> |
| 6246 <span class=range>Range 2: 839 to 845</span> | |
| 6247 </p> | |
| 6248 | |
| 6249 <table class=hotspotstable> | |
| 6250 <tr> | |
| 6251 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6252 </tr> | |
| 6253 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6254 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6255 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6256 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6257 <td>0/7 (0%)</td> |
| 32 | 6258 <td>Plus/Plus</td> |
| 6259 </tr> | |
| 6260 </table> | |
| 6261 | |
| 6262 <pre class=alignmentgraphic>Query 7 TCGTGAA 13 | |
| 6263 ||||||| | |
| 6264 Subject 839 TCGTGAA 845</pre> | |
| 6265 </div> | |
| 6266 | |
| 6267 </div> | |
| 6268 | |
| 59 | 6269 <div class=alignment id=hit1-26> |
| 6270 | |
| 6271 <div class=linkheader> | |
| 6272 <div class=right><a href="#description1-26">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6273 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6274 </div> |
| 6275 | |
| 6276 <div class=title> | |
| 6277 <p class=hittitle>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</p> | |
| 6278 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6279 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">gi|582044940|pdb|3J62|AA</a> |
| 32 | 6280 <span class=b>Length:</span> 3391 |
| 6281 <span class=b>Number of Matches:</span> 5 | |
| 6282 </p> | |
| 6283 </div> | |
| 6284 | |
| 6285 | |
| 59 | 6286 <div class=hotspot id=hotspot1-26-1> |
| 32 | 6287 <p class=range> |
| 6288 <span class=range>Range 1: 2961 to 2969</span> | |
| 6289 </p> | |
| 6290 | |
| 6291 <table class=hotspotstable> | |
| 6292 <tr> | |
| 6293 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6294 </tr> | |
| 6295 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6296 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6297 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6298 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6299 <td>0/9 (0%)</td> |
| 32 | 6300 <td>Plus/Plus</td> |
| 6301 </tr> | |
| 6302 </table> | |
| 6303 | |
| 6304 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6305 ||||||||| | |
| 6306 Subject 2961 CCGTCGTGA 2969</pre> | |
| 6307 </div> | |
| 59 | 6308 <div class=hotspot id=hotspot1-26-2> |
| 32 | 6309 <p class=range> |
| 6310 <span class=range>Range 2: 177 to 170</span> | |
| 6311 </p> | |
| 6312 | |
| 6313 <table class=hotspotstable> | |
| 6314 <tr> | |
| 6315 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6316 </tr> | |
| 6317 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6318 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6319 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6320 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6321 <td>0/8 (0%)</td> |
| 32 | 6322 <td>Plus/Minus</td> |
| 6323 </tr> | |
| 6324 </table> | |
| 6325 | |
| 6326 <pre class=alignmentgraphic>Query 2 GTCCGTCG 9 | |
| 6327 |||||||| | |
| 69 | 6328 Subject 177 GTCCGTCG 170</pre> |
| 32 | 6329 </div> |
| 59 | 6330 <div class=hotspot id=hotspot1-26-3> |
| 32 | 6331 <p class=range> |
| 6332 <span class=range>Range 3: 553 to 559</span> | |
| 6333 </p> | |
| 6334 | |
| 6335 <table class=hotspotstable> | |
| 6336 <tr> | |
| 6337 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6338 </tr> | |
| 6339 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6340 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6341 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6342 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6343 <td>0/7 (0%)</td> |
| 32 | 6344 <td>Plus/Plus</td> |
| 6345 </tr> | |
| 6346 </table> | |
| 6347 | |
| 6348 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 6349 ||||||| | |
| 6350 Subject 553 CCGTCGT 559</pre> | |
| 6351 </div> | |
| 59 | 6352 <div class=hotspot id=hotspot1-26-4> |
| 32 | 6353 <p class=range> |
| 6354 <span class=range>Range 4: 2048 to 2042</span> | |
| 6355 </p> | |
| 6356 | |
| 6357 <table class=hotspotstable> | |
| 6358 <tr> | |
| 6359 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6360 </tr> | |
| 6361 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6362 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6363 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6364 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6365 <td>0/7 (0%)</td> |
| 32 | 6366 <td>Plus/Minus</td> |
| 6367 </tr> | |
| 6368 </table> | |
| 6369 | |
| 6370 <pre class=alignmentgraphic>Query 2 GTCCGTC 8 | |
| 6371 ||||||| | |
| 69 | 6372 Subject 2048 GTCCGTC 2042</pre> |
| 32 | 6373 </div> |
| 59 | 6374 <div class=hotspot id=hotspot1-26-5> |
| 32 | 6375 <p class=range> |
| 6376 <span class=range>Range 5: 2211 to 2217</span> | |
| 6377 </p> | |
| 6378 | |
| 6379 <table class=hotspotstable> | |
| 6380 <tr> | |
| 6381 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6382 </tr> | |
| 6383 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6384 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6385 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6386 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6387 <td>0/7 (0%)</td> |
| 32 | 6388 <td>Plus/Plus</td> |
| 6389 </tr> | |
| 6390 </table> | |
| 6391 | |
| 6392 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6393 ||||||| | |
| 6394 Subject 2211 GTGAAGA 2217</pre> | |
| 6395 </div> | |
| 6396 | |
| 6397 </div> | |
| 6398 | |
| 59 | 6399 <div class=alignment id=hit1-27> |
| 6400 | |
| 6401 <div class=linkheader> | |
| 6402 <div class=right><a href="#description1-27">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6403 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6404 </div> |
| 6405 | |
| 6406 <div class=title> | |
| 6407 <p class=hittitle>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</p> | |
| 6408 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6409 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">gi|567755268|pdb|4CE4|A</a> |
| 32 | 6410 <span class=b>Length:</span> 1570 |
| 6411 <span class=b>Number of Matches:</span> 1 | |
| 6412 </p> | |
| 6413 </div> | |
| 6414 | |
| 6415 | |
| 59 | 6416 <div class=hotspot id=hotspot1-27-1> |
| 32 | 6417 <p class=range> |
| 6418 <span class=range>Range 1: 1020 to 1028</span> | |
| 6419 </p> | |
| 6420 | |
| 6421 <table class=hotspotstable> | |
| 6422 <tr> | |
| 6423 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6424 </tr> | |
| 6425 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6426 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6427 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6428 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6429 <td>0/9 (0%)</td> |
| 32 | 6430 <td>Plus/Plus</td> |
| 6431 </tr> | |
| 6432 </table> | |
| 6433 | |
| 6434 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16 | |
| 6435 ||||||||| | |
| 6436 Subject 1020 CGTGAAGAG 1028</pre> | |
| 6437 </div> | |
| 6438 | |
| 6439 </div> | |
| 6440 | |
| 59 | 6441 <div class=alignment id=hit1-28> |
| 6442 | |
| 6443 <div class=linkheader> | |
| 6444 <div class=right><a href="#description1-28">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6445 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6446 </div> |
| 6447 | |
| 6448 <div class=title> | |
| 6449 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6450 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6451 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">gi|558704783|pdb|4BYP|5</a> |
| 32 | 6452 <span class=b>Length:</span> 3396 |
| 6453 <span class=b>Number of Matches:</span> 5 | |
| 6454 </p> | |
| 6455 </div> | |
| 6456 | |
| 6457 | |
| 59 | 6458 <div class=hotspot id=hotspot1-28-1> |
| 32 | 6459 <p class=range> |
| 6460 <span class=range>Range 1: 2959 to 2967</span> | |
| 6461 </p> | |
| 6462 | |
| 6463 <table class=hotspotstable> | |
| 6464 <tr> | |
| 6465 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6466 </tr> | |
| 6467 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6468 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6469 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6470 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6471 <td>0/9 (0%)</td> |
| 32 | 6472 <td>Plus/Plus</td> |
| 6473 </tr> | |
| 6474 </table> | |
| 6475 | |
| 6476 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6477 ||||||||| | |
| 6478 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6479 </div> | |
| 59 | 6480 <div class=hotspot id=hotspot1-28-2> |
| 32 | 6481 <p class=range> |
| 6482 <span class=range>Range 2: 1634 to 1627</span> | |
| 6483 </p> | |
| 6484 | |
| 6485 <table class=hotspotstable> | |
| 6486 <tr> | |
| 6487 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6488 </tr> | |
| 6489 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6490 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6491 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6492 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6493 <td>0/8 (0%)</td> |
| 32 | 6494 <td>Plus/Minus</td> |
| 6495 </tr> | |
| 6496 </table> | |
| 6497 | |
| 6498 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6499 |||||||| | |
| 69 | 6500 Subject 1634 CGTGAAGA 1627</pre> |
| 32 | 6501 </div> |
| 59 | 6502 <div class=hotspot id=hotspot1-28-3> |
| 32 | 6503 <p class=range> |
| 6504 <span class=range>Range 3: 2435 to 2442</span> | |
| 6505 </p> | |
| 6506 | |
| 6507 <table class=hotspotstable> | |
| 6508 <tr> | |
| 6509 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6510 </tr> | |
| 6511 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6512 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6513 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6514 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6515 <td>0/8 (0%)</td> |
| 32 | 6516 <td>Plus/Plus</td> |
| 6517 </tr> | |
| 6518 </table> | |
| 6519 | |
| 6520 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6521 |||||||| | |
| 6522 Subject 2435 GTGAAGAG 2442</pre> | |
| 6523 </div> | |
| 59 | 6524 <div class=hotspot id=hotspot1-28-4> |
| 32 | 6525 <p class=range> |
| 6526 <span class=range>Range 4: 1100 to 1106</span> | |
| 6527 </p> | |
| 6528 | |
| 6529 <table class=hotspotstable> | |
| 6530 <tr> | |
| 6531 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6532 </tr> | |
| 6533 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6534 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6535 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6536 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6537 <td>0/7 (0%)</td> |
| 32 | 6538 <td>Plus/Plus</td> |
| 6539 </tr> | |
| 6540 </table> | |
| 6541 | |
| 6542 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6543 ||||||| | |
| 6544 Subject 1100 TGAAGAG 1106</pre> | |
| 6545 </div> | |
| 59 | 6546 <div class=hotspot id=hotspot1-28-5> |
| 32 | 6547 <p class=range> |
| 6548 <span class=range>Range 5: 2216 to 2222</span> | |
| 6549 </p> | |
| 6550 | |
| 6551 <table class=hotspotstable> | |
| 6552 <tr> | |
| 6553 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6554 </tr> | |
| 6555 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6556 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6557 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6558 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6559 <td>0/7 (0%)</td> |
| 32 | 6560 <td>Plus/Plus</td> |
| 6561 </tr> | |
| 6562 </table> | |
| 6563 | |
| 6564 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6565 ||||||| | |
| 6566 Subject 2216 GTGAAGA 2222</pre> | |
| 6567 </div> | |
| 6568 | |
| 6569 </div> | |
| 6570 | |
| 59 | 6571 <div class=alignment id=hit1-29> |
| 6572 | |
| 6573 <div class=linkheader> | |
| 6574 <div class=right><a href="#description1-29">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6575 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6576 </div> |
| 6577 | |
| 6578 <div class=title> | |
| 6579 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6580 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6581 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">gi|558704825|pdb|4BYW|5</a> |
| 32 | 6582 <span class=b>Length:</span> 3396 |
| 6583 <span class=b>Number of Matches:</span> 5 | |
| 6584 </p> | |
| 6585 </div> | |
| 6586 | |
| 6587 | |
| 59 | 6588 <div class=hotspot id=hotspot1-29-1> |
| 32 | 6589 <p class=range> |
| 6590 <span class=range>Range 1: 2959 to 2967</span> | |
| 6591 </p> | |
| 6592 | |
| 6593 <table class=hotspotstable> | |
| 6594 <tr> | |
| 6595 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6596 </tr> | |
| 6597 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6598 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6599 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6600 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6601 <td>0/9 (0%)</td> |
| 32 | 6602 <td>Plus/Plus</td> |
| 6603 </tr> | |
| 6604 </table> | |
| 6605 | |
| 6606 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6607 ||||||||| | |
| 6608 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6609 </div> | |
| 59 | 6610 <div class=hotspot id=hotspot1-29-2> |
| 32 | 6611 <p class=range> |
| 6612 <span class=range>Range 2: 1634 to 1627</span> | |
| 6613 </p> | |
| 6614 | |
| 6615 <table class=hotspotstable> | |
| 6616 <tr> | |
| 6617 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6618 </tr> | |
| 6619 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6620 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6621 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6622 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6623 <td>0/8 (0%)</td> |
| 32 | 6624 <td>Plus/Minus</td> |
| 6625 </tr> | |
| 6626 </table> | |
| 6627 | |
| 6628 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6629 |||||||| | |
| 69 | 6630 Subject 1634 CGTGAAGA 1627</pre> |
| 32 | 6631 </div> |
| 59 | 6632 <div class=hotspot id=hotspot1-29-3> |
| 32 | 6633 <p class=range> |
| 6634 <span class=range>Range 3: 2435 to 2442</span> | |
| 6635 </p> | |
| 6636 | |
| 6637 <table class=hotspotstable> | |
| 6638 <tr> | |
| 6639 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6640 </tr> | |
| 6641 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6642 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6643 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6644 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6645 <td>0/8 (0%)</td> |
| 32 | 6646 <td>Plus/Plus</td> |
| 6647 </tr> | |
| 6648 </table> | |
| 6649 | |
| 6650 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6651 |||||||| | |
| 6652 Subject 2435 GTGAAGAG 2442</pre> | |
| 6653 </div> | |
| 59 | 6654 <div class=hotspot id=hotspot1-29-4> |
| 32 | 6655 <p class=range> |
| 6656 <span class=range>Range 4: 1100 to 1106</span> | |
| 6657 </p> | |
| 6658 | |
| 6659 <table class=hotspotstable> | |
| 6660 <tr> | |
| 6661 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6662 </tr> | |
| 6663 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6664 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6665 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6666 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6667 <td>0/7 (0%)</td> |
| 32 | 6668 <td>Plus/Plus</td> |
| 6669 </tr> | |
| 6670 </table> | |
| 6671 | |
| 6672 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6673 ||||||| | |
| 6674 Subject 1100 TGAAGAG 1106</pre> | |
| 6675 </div> | |
| 59 | 6676 <div class=hotspot id=hotspot1-29-5> |
| 32 | 6677 <p class=range> |
| 6678 <span class=range>Range 5: 2216 to 2222</span> | |
| 6679 </p> | |
| 6680 | |
| 6681 <table class=hotspotstable> | |
| 6682 <tr> | |
| 6683 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6684 </tr> | |
| 6685 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6686 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6687 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6688 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6689 <td>0/7 (0%)</td> |
| 32 | 6690 <td>Plus/Plus</td> |
| 6691 </tr> | |
| 6692 </table> | |
| 6693 | |
| 6694 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6695 ||||||| | |
| 6696 Subject 2216 GTGAAGA 2222</pre> | |
| 6697 </div> | |
| 6698 | |
| 6699 </div> | |
| 6700 | |
|
119
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6701 <div class=alignment id=hit1-30> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6702 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6703 <div class=linkheader> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6704 <div class=right><a href="#description1-30">Descriptions</a></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6705 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">Gene Bank</a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6706 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6707 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6708 <div class=title> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6709 <p class=hittitle>Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)</p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6710 <p class=titleinfo> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6711 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">gi|551701574|pdb|3J44|1</a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6712 <span class=b>Length:</span> 3049 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6713 <span class=b>Number of Matches:</span> 2 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6714 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6715 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6716 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6717 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6718 <div class=hotspot id=hotspot1-30-1> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6719 <p class=range> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6720 <span class=range>Range 1: 651 to 663</span> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6721 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6722 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6723 <table class=hotspotstable> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6724 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6725 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6726 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6727 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6728 <td>18.3341 bits (9)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6729 <td>11.9013</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6730 <td>12/13 (92%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6731 <td>0/13 (0%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6732 <td>Plus/Plus</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6733 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6734 </table> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6735 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6736 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAA 13 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6737 |||||||| |||| |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6738 Subject 651 CGTCCGTCTTGAA 663</pre> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6739 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6740 <div class=hotspot id=hotspot1-30-2> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6741 <p class=range> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6742 <span class=range>Range 2: 2705 to 2713</span> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6743 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6744 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6745 <table class=hotspotstable> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6746 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6747 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6748 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6749 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6750 <td>18.3341 bits (9)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6751 <td>11.9013</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6752 <td>9/9 (100%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6753 <td>0/9 (0%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6754 <td>Plus/Plus</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6755 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6756 </table> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6757 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6758 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6759 ||||||||| |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6760 Subject 2705 CCGTCGTGA 2713</pre> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6761 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6762 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6763 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
6764 |
| 59 | 6765 <div class=alignment id=hit1-31> |
| 6766 | |
| 6767 <div class=linkheader> | |
| 6768 <div class=right><a href="#description1-31">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6769 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6770 </div> |
| 6771 | |
| 6772 <div class=title> | |
| 6773 <p class=hittitle>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</p> | |
| 6774 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6775 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">gi|508123724|pdb|4HUB|0</a> |
| 32 | 6776 <span class=b>Length:</span> 2910 |
| 6777 <span class=b>Number of Matches:</span> 3 | |
| 6778 </p> | |
| 6779 </div> | |
| 6780 | |
| 6781 | |
| 59 | 6782 <div class=hotspot id=hotspot1-31-1> |
| 32 | 6783 <p class=range> |
| 6784 <span class=range>Range 1: 298 to 290</span> | |
| 6785 </p> | |
| 6786 | |
| 6787 <table class=hotspotstable> | |
| 6788 <tr> | |
| 6789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6790 </tr> | |
| 6791 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6792 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6793 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6794 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6795 <td>0/9 (0%)</td> |
| 32 | 6796 <td>Plus/Minus</td> |
| 6797 </tr> | |
| 6798 </table> | |
| 6799 | |
| 6800 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 6801 ||||||||| | |
| 69 | 6802 Subject 298 TCGTGAAGA 290</pre> |
| 32 | 6803 </div> |
| 59 | 6804 <div class=hotspot id=hotspot1-31-2> |
| 32 | 6805 <p class=range> |
| 6806 <span class=range>Range 2: 2618 to 2626</span> | |
| 6807 </p> | |
| 6808 | |
| 6809 <table class=hotspotstable> | |
| 6810 <tr> | |
| 6811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6812 </tr> | |
| 6813 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6814 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6815 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6816 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6817 <td>0/9 (0%)</td> |
| 32 | 6818 <td>Plus/Plus</td> |
| 6819 </tr> | |
| 6820 </table> | |
| 6821 | |
| 6822 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6823 ||||||||| | |
| 6824 Subject 2618 CCGTCGTGA 2626</pre> | |
| 6825 </div> | |
| 59 | 6826 <div class=hotspot id=hotspot1-31-3> |
| 32 | 6827 <p class=range> |
| 6828 <span class=range>Range 3: 2599 to 2605</span> | |
| 6829 </p> | |
| 6830 | |
| 6831 <table class=hotspotstable> | |
| 6832 <tr> | |
| 6833 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6834 </tr> | |
| 6835 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6836 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6837 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6838 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6839 <td>0/7 (0%)</td> |
| 32 | 6840 <td>Plus/Plus</td> |
| 6841 </tr> | |
| 6842 </table> | |
| 6843 | |
| 6844 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 6845 ||||||| | |
| 6846 Subject 2599 GTCGTGA 2605</pre> | |
| 6847 </div> | |
| 6848 | |
| 6849 </div> | |
| 6850 | |
| 59 | 6851 <div class=alignment id=hit1-32> |
| 6852 | |
| 6853 <div class=linkheader> | |
| 6854 <div class=right><a href="#description1-32">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6855 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 6856 </div> |
| 6857 | |
| 6858 <div class=title> | |
| 6859 <p class=hittitle>Chain 5, Structure Of The H. Sapiens 60s Rrna</p> | |
| 6860 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6861 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">gi|485601478|pdb|3J3F|5</a> |
| 32 | 6862 <span class=b>Length:</span> 5070 |
| 6863 <span class=b>Number of Matches:</span> 8 | |
| 6864 </p> | |
| 6865 </div> | |
| 6866 | |
| 6867 | |
| 59 | 6868 <div class=hotspot id=hotspot1-32-1> |
| 32 | 6869 <p class=range> |
| 6870 <span class=range>Range 1: 4536 to 4544</span> | |
| 6871 </p> | |
| 6872 | |
| 6873 <table class=hotspotstable> | |
| 6874 <tr> | |
| 6875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6876 </tr> | |
| 6877 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6878 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6879 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6880 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6881 <td>0/9 (0%)</td> |
| 32 | 6882 <td>Plus/Plus</td> |
| 6883 </tr> | |
| 6884 </table> | |
| 6885 | |
| 6886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6887 ||||||||| | |
| 6888 Subject 4536 CCGTCGTGA 4544</pre> | |
| 6889 </div> | |
| 59 | 6890 <div class=hotspot id=hotspot1-32-2> |
| 32 | 6891 <p class=range> |
| 6892 <span class=range>Range 2: 765 to 772</span> | |
| 6893 </p> | |
| 6894 | |
| 6895 <table class=hotspotstable> | |
| 6896 <tr> | |
| 6897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6898 </tr> | |
| 6899 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6900 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6901 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6902 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6903 <td>0/8 (0%)</td> |
| 32 | 6904 <td>Plus/Plus</td> |
| 6905 </tr> | |
| 6906 </table> | |
| 6907 | |
| 6908 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6909 |||||||| | |
| 6910 Subject 765 CGTCCGTC 772</pre> | |
| 6911 </div> | |
| 59 | 6912 <div class=hotspot id=hotspot1-32-3> |
| 32 | 6913 <p class=range> |
| 6914 <span class=range>Range 3: 769 to 776</span> | |
| 6915 </p> | |
| 6916 | |
| 6917 <table class=hotspotstable> | |
| 6918 <tr> | |
| 6919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6920 </tr> | |
| 6921 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6922 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6923 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6924 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6925 <td>0/8 (0%)</td> |
| 32 | 6926 <td>Plus/Plus</td> |
| 6927 </tr> | |
| 6928 </table> | |
| 6929 | |
| 6930 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6931 |||||||| | |
| 6932 Subject 769 CGTCCGTC 776</pre> | |
| 6933 </div> | |
| 59 | 6934 <div class=hotspot id=hotspot1-32-4> |
| 32 | 6935 <p class=range> |
| 6936 <span class=range>Range 4: 773 to 780</span> | |
| 6937 </p> | |
| 6938 | |
| 6939 <table class=hotspotstable> | |
| 6940 <tr> | |
| 6941 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6942 </tr> | |
| 6943 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6944 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6945 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6946 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6947 <td>0/8 (0%)</td> |
| 32 | 6948 <td>Plus/Plus</td> |
| 6949 </tr> | |
| 6950 </table> | |
| 6951 | |
| 6952 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6953 |||||||| | |
| 6954 Subject 773 CGTCCGTC 780</pre> | |
| 6955 </div> | |
| 59 | 6956 <div class=hotspot id=hotspot1-32-5> |
| 32 | 6957 <p class=range> |
| 6958 <span class=range>Range 5: 777 to 784</span> | |
| 6959 </p> | |
| 6960 | |
| 6961 <table class=hotspotstable> | |
| 6962 <tr> | |
| 6963 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6964 </tr> | |
| 6965 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6966 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6967 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6968 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6969 <td>0/8 (0%)</td> |
| 32 | 6970 <td>Plus/Plus</td> |
| 6971 </tr> | |
| 6972 </table> | |
| 6973 | |
| 6974 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6975 |||||||| | |
| 6976 Subject 777 CGTCCGTC 784</pre> | |
| 6977 </div> | |
| 59 | 6978 <div class=hotspot id=hotspot1-32-6> |
| 32 | 6979 <p class=range> |
| 6980 <span class=range>Range 6: 3939 to 3946</span> | |
| 6981 </p> | |
| 6982 | |
| 6983 <table class=hotspotstable> | |
| 6984 <tr> | |
| 6985 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6986 </tr> | |
| 6987 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6988 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6989 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6990 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
6991 <td>0/8 (0%)</td> |
| 32 | 6992 <td>Plus/Plus</td> |
| 6993 </tr> | |
| 6994 </table> | |
| 6995 | |
| 6996 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6997 |||||||| | |
| 6998 Subject 3939 GTGAAGAG 3946</pre> | |
| 6999 </div> | |
| 59 | 7000 <div class=hotspot id=hotspot1-32-7> |
| 32 | 7001 <p class=range> |
| 7002 <span class=range>Range 7: 393 to 399</span> | |
| 7003 </p> | |
| 7004 | |
| 7005 <table class=hotspotstable> | |
| 7006 <tr> | |
| 7007 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7008 </tr> | |
| 7009 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7010 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7011 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7012 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7013 <td>0/7 (0%)</td> |
| 32 | 7014 <td>Plus/Plus</td> |
| 7015 </tr> | |
| 7016 </table> | |
| 7017 | |
| 7018 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7019 ||||||| | |
| 7020 Subject 393 TGAAGAG 399</pre> | |
| 7021 </div> | |
| 59 | 7022 <div class=hotspot id=hotspot1-32-8> |
| 32 | 7023 <p class=range> |
| 7024 <span class=range>Range 8: 3720 to 3726</span> | |
| 7025 </p> | |
| 7026 | |
| 7027 <table class=hotspotstable> | |
| 7028 <tr> | |
| 7029 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7030 </tr> | |
| 7031 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7032 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7033 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7034 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7035 <td>0/7 (0%)</td> |
| 32 | 7036 <td>Plus/Plus</td> |
| 7037 </tr> | |
| 7038 </table> | |
| 7039 | |
| 7040 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7041 ||||||| | |
| 7042 Subject 3720 GTGAAGA 3726</pre> | |
| 7043 </div> | |
| 7044 | |
| 7045 </div> | |
| 7046 | |
| 59 | 7047 <div class=alignment id=hit1-33> |
| 7048 | |
| 7049 <div class=linkheader> | |
| 7050 <div class=right><a href="#description1-33">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7051 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7052 </div> |
| 7053 | |
| 7054 <div class=title> | |
| 7055 <p class=hittitle>Chain 5, Structure Of The D. Melanogaster 60s Rrna</p> | |
| 7056 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7057 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">gi|485601474|pdb|3J3E|5</a> |
| 32 | 7058 <span class=b>Length:</span> 3970 |
| 7059 <span class=b>Number of Matches:</span> 4 | |
| 7060 </p> | |
| 7061 </div> | |
| 7062 | |
| 7063 | |
| 59 | 7064 <div class=hotspot id=hotspot1-33-1> |
| 32 | 7065 <p class=range> |
| 7066 <span class=range>Range 1: 3490 to 3498</span> | |
| 7067 </p> | |
| 7068 | |
| 7069 <table class=hotspotstable> | |
| 7070 <tr> | |
| 7071 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7072 </tr> | |
| 7073 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7074 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7075 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7076 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7077 <td>0/9 (0%)</td> |
| 32 | 7078 <td>Plus/Plus</td> |
| 7079 </tr> | |
| 7080 </table> | |
| 7081 | |
| 7082 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7083 ||||||||| | |
| 7084 Subject 3490 CCGTCGTGA 3498</pre> | |
| 7085 </div> | |
| 59 | 7086 <div class=hotspot id=hotspot1-33-2> |
| 32 | 7087 <p class=range> |
| 7088 <span class=range>Range 2: 2177 to 2184</span> | |
| 7089 </p> | |
| 7090 | |
| 7091 <table class=hotspotstable> | |
| 7092 <tr> | |
| 7093 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7094 </tr> | |
| 7095 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7096 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7097 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7098 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7099 <td>0/8 (0%)</td> |
| 32 | 7100 <td>Plus/Plus</td> |
| 7101 </tr> | |
| 7102 </table> | |
| 7103 | |
| 7104 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 7105 |||||||| | |
| 7106 Subject 2177 GTGAAGAG 2184</pre> | |
| 7107 </div> | |
| 59 | 7108 <div class=hotspot id=hotspot1-33-3> |
| 32 | 7109 <p class=range> |
| 7110 <span class=range>Range 3: 2594 to 2600</span> | |
| 7111 </p> | |
| 7112 | |
| 7113 <table class=hotspotstable> | |
| 7114 <tr> | |
| 7115 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7116 </tr> | |
| 7117 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7118 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7119 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7120 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7121 <td>0/7 (0%)</td> |
| 32 | 7122 <td>Plus/Plus</td> |
| 7123 </tr> | |
| 7124 </table> | |
| 7125 | |
| 7126 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7127 ||||||| | |
| 7128 Subject 2594 GTGAAGA 2600</pre> | |
| 7129 </div> | |
| 59 | 7130 <div class=hotspot id=hotspot1-33-4> |
| 32 | 7131 <p class=range> |
| 7132 <span class=range>Range 4: 3627 to 3633</span> | |
| 7133 </p> | |
| 7134 | |
| 7135 <table class=hotspotstable> | |
| 7136 <tr> | |
| 7137 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7138 </tr> | |
| 7139 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7140 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7141 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7142 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7143 <td>0/7 (0%)</td> |
| 32 | 7144 <td>Plus/Plus</td> |
| 7145 </tr> | |
| 7146 </table> | |
| 7147 | |
| 7148 <pre class=alignmentgraphic>Query 1 CGTCCGT 7 | |
| 7149 ||||||| | |
| 7150 Subject 3627 CGTCCGT 3633</pre> | |
| 7151 </div> | |
| 7152 | |
| 7153 </div> | |
| 7154 | |
| 59 | 7155 <div class=alignment id=hit1-34> |
| 7156 | |
| 7157 <div class=linkheader> | |
| 7158 <div class=right><a href="#description1-34">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7159 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7160 </div> |
| 7161 | |
| 7162 <div class=title> | |
| 7163 <p class=hittitle>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</p> | |
| 7164 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7165 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">gi|449802187|pdb|3ZEX|B</a> |
| 32 | 7166 <span class=b>Length:</span> 1465 |
| 7167 <span class=b>Number of Matches:</span> 2 | |
| 7168 </p> | |
| 7169 </div> | |
| 7170 | |
| 7171 | |
| 59 | 7172 <div class=hotspot id=hotspot1-34-1> |
| 32 | 7173 <p class=range> |
| 7174 <span class=range>Range 1: 1334 to 1342</span> | |
| 7175 </p> | |
| 7176 | |
| 7177 <table class=hotspotstable> | |
| 7178 <tr> | |
| 7179 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7180 </tr> | |
| 7181 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7182 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7183 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7184 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7185 <td>0/9 (0%)</td> |
| 32 | 7186 <td>Plus/Plus</td> |
| 7187 </tr> | |
| 7188 </table> | |
| 7189 | |
| 7190 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7191 ||||||||| | |
| 7192 Subject 1334 CCGTCGTGA 1342</pre> | |
| 7193 </div> | |
| 59 | 7194 <div class=hotspot id=hotspot1-34-2> |
| 32 | 7195 <p class=range> |
| 7196 <span class=range>Range 2: 705 to 711</span> | |
| 7197 </p> | |
| 7198 | |
| 7199 <table class=hotspotstable> | |
| 7200 <tr> | |
| 7201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7202 </tr> | |
| 7203 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7204 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7205 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7206 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7207 <td>0/7 (0%)</td> |
| 32 | 7208 <td>Plus/Plus</td> |
| 7209 </tr> | |
| 7210 </table> | |
| 7211 | |
| 7212 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7213 ||||||| | |
| 7214 Subject 705 TGAAGAG 711</pre> | |
| 7215 </div> | |
| 7216 | |
| 7217 </div> | |
| 7218 | |
|
119
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7219 <div class=alignment id=hit1-35> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7220 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7221 <div class=linkheader> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7222 <div class=right><a href="#description1-35">Descriptions</a></div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7223 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">Gene Bank</a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7224 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7225 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7226 <div class=title> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7227 <p class=hittitle>Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)</p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7228 <p class=titleinfo> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7229 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">gi|428697991|pdb|3J2L|1</a> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7230 <span class=b>Length:</span> 3049 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7231 <span class=b>Number of Matches:</span> 2 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7232 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7233 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7234 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7235 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7236 <div class=hotspot id=hotspot1-35-1> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7237 <p class=range> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7238 <span class=range>Range 1: 651 to 663</span> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7239 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7240 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7241 <table class=hotspotstable> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7242 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7243 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7244 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7245 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7246 <td>18.3341 bits (9)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7247 <td>11.9013</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7248 <td>12/13 (92%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7249 <td>0/13 (0%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7250 <td>Plus/Plus</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7251 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7252 </table> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7253 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7254 <pre class=alignmentgraphic>Query 1 CGTCCGTCGTGAA 13 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7255 |||||||| |||| |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7256 Subject 651 CGTCCGTCTTGAA 663</pre> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7257 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7258 <div class=hotspot id=hotspot1-35-2> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7259 <p class=range> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7260 <span class=range>Range 2: 2705 to 2713</span> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7261 </p> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7262 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7263 <table class=hotspotstable> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7264 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7265 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7266 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7267 <tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7268 <td>18.3341 bits (9)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7269 <td>11.9013</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7270 <td>9/9 (100%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7271 <td>0/9 (0%)</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7272 <td>Plus/Plus</td> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7273 </tr> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7274 </table> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7275 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7276 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7277 ||||||||| |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7278 Subject 2705 CCGTCGTGA 2713</pre> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7279 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7280 |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7281 </div> |
|
591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
Jan Kanis <jan.code@jankanis.nl>
parents:
118
diff
changeset
|
7282 |
| 59 | 7283 <div class=alignment id=hit1-36> |
| 7284 | |
| 7285 <div class=linkheader> | |
| 7286 <div class=right><a href="#description1-36">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7287 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7288 </div> |
| 7289 | |
| 7290 <div class=title> | |
| 7291 <p class=hittitle>Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit</p> | |
| 7292 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7293 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&log$=nuclalign">gi|392311504|pdb|3OW2|0</a> |
| 32 | 7294 <span class=b>Length:</span> 2902 |
| 7295 <span class=b>Number of Matches:</span> 2 | |
| 7296 </p> | |
| 7297 </div> | |
| 7298 | |
| 7299 | |
| 59 | 7300 <div class=hotspot id=hotspot1-36-1> |
| 32 | 7301 <p class=range> |
| 7302 <span class=range>Range 1: 2613 to 2621</span> | |
| 7303 </p> | |
| 7304 | |
| 7305 <table class=hotspotstable> | |
| 7306 <tr> | |
| 7307 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7308 </tr> | |
| 7309 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7310 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7311 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7312 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7313 <td>0/9 (0%)</td> |
| 32 | 7314 <td>Plus/Plus</td> |
| 7315 </tr> | |
| 7316 </table> | |
| 7317 | |
| 7318 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7319 ||||||||| | |
| 7320 Subject 2613 CCGTCGTGA 2621</pre> | |
| 7321 </div> | |
| 59 | 7322 <div class=hotspot id=hotspot1-36-2> |
| 32 | 7323 <p class=range> |
| 7324 <span class=range>Range 2: 2594 to 2600</span> | |
| 7325 </p> | |
| 7326 | |
| 7327 <table class=hotspotstable> | |
| 7328 <tr> | |
| 7329 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7330 </tr> | |
| 7331 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7332 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7333 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7334 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7335 <td>0/7 (0%)</td> |
| 32 | 7336 <td>Plus/Plus</td> |
| 7337 </tr> | |
| 7338 </table> | |
| 7339 | |
| 7340 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 7341 ||||||| | |
| 7342 Subject 2594 GTCGTGA 2600</pre> | |
| 7343 </div> | |
| 7344 | |
| 7345 </div> | |
| 7346 | |
| 59 | 7347 <div class=alignment id=hit1-37> |
| 7348 | |
| 7349 <div class=linkheader> | |
| 7350 <div class=right><a href="#description1-37">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7351 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4ADX_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7352 </div> |
| 7353 | |
| 7354 <div class=title> | |
| 7355 <p class=hittitle>Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6</p> | |
| 7356 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7357 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4ADX_0?report=genbank&log$=nuclalign">gi|374977932|pdb|4ADX|0</a> |
| 32 | 7358 <span class=b>Length:</span> 2923 |
| 7359 <span class=b>Number of Matches:</span> 3 | |
| 7360 </p> | |
| 7361 </div> | |
| 7362 | |
| 7363 | |
| 59 | 7364 <div class=hotspot id=hotspot1-37-1> |
| 32 | 7365 <p class=range> |
| 7366 <span class=range>Range 1: 305 to 297</span> | |
| 7367 </p> | |
| 7368 | |
| 7369 <table class=hotspotstable> | |
| 7370 <tr> | |
| 7371 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7372 </tr> | |
| 7373 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7374 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7375 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7376 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7377 <td>0/9 (0%)</td> |
| 32 | 7378 <td>Plus/Minus</td> |
| 7379 </tr> | |
| 7380 </table> | |
| 7381 | |
| 7382 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 7383 ||||||||| | |
| 69 | 7384 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 7385 </div> |
| 59 | 7386 <div class=hotspot id=hotspot1-37-2> |
| 32 | 7387 <p class=range> |
| 7388 <span class=range>Range 2: 2625 to 2633</span> | |
| 7389 </p> | |
| 7390 | |
| 7391 <table class=hotspotstable> | |
| 7392 <tr> | |
| 7393 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7394 </tr> | |
| 7395 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7396 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7397 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7398 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7399 <td>0/9 (0%)</td> |
| 32 | 7400 <td>Plus/Plus</td> |
| 7401 </tr> | |
| 7402 </table> | |
| 7403 | |
| 7404 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7405 ||||||||| | |
| 7406 Subject 2625 CCGTCGTGA 2633</pre> | |
| 7407 </div> | |
| 59 | 7408 <div class=hotspot id=hotspot1-37-3> |
| 32 | 7409 <p class=range> |
| 7410 <span class=range>Range 3: 2606 to 2612</span> | |
| 7411 </p> | |
| 7412 | |
| 7413 <table class=hotspotstable> | |
| 7414 <tr> | |
| 7415 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7416 </tr> | |
| 7417 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7418 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7419 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7420 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7421 <td>0/7 (0%)</td> |
| 32 | 7422 <td>Plus/Plus</td> |
| 7423 </tr> | |
| 7424 </table> | |
| 7425 | |
| 7426 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 7427 ||||||| | |
| 7428 Subject 2606 GTCGTGA 2612</pre> | |
| 7429 </div> | |
| 7430 | |
| 7431 </div> | |
| 7432 | |
| 59 | 7433 <div class=alignment id=hit1-38> |
| 7434 | |
| 7435 <div class=linkheader> | |
| 7436 <div class=right><a href="#description1-38">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7437 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5F_6?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7438 </div> |
| 7439 | |
| 7440 <div class=title> | |
| 7441 <p class=hittitle>Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B</p> | |
| 7442 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7443 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5F_6?report=genbank&log$=nuclalign">gi|364506133|pdb|3U5F|6</a> |
| 32 | 7444 <span class=b>Length:</span> 1800 |
| 7445 <span class=b>Number of Matches:</span> 3 | |
| 7446 </p> | |
| 7447 </div> | |
| 7448 | |
| 7449 | |
| 59 | 7450 <div class=hotspot id=hotspot1-38-1> |
| 32 | 7451 <p class=range> |
| 7452 <span class=range>Range 1: 1528 to 1536</span> | |
| 7453 </p> | |
| 7454 | |
| 7455 <table class=hotspotstable> | |
| 7456 <tr> | |
| 7457 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7458 </tr> | |
| 7459 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7460 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7461 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7462 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7463 <td>0/9 (0%)</td> |
| 32 | 7464 <td>Plus/Plus</td> |
| 7465 </tr> | |
| 7466 </table> | |
| 7467 | |
| 7468 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 7469 ||||||||| | |
| 7470 Subject 1528 TCCGTCGTG 1536</pre> | |
| 7471 </div> | |
| 59 | 7472 <div class=hotspot id=hotspot1-38-2> |
| 32 | 7473 <p class=range> |
| 7474 <span class=range>Range 2: 1006 to 1012</span> | |
| 7475 </p> | |
| 7476 | |
| 7477 <table class=hotspotstable> | |
| 7478 <tr> | |
| 7479 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7480 </tr> | |
| 7481 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7482 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7483 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7484 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7485 <td>0/7 (0%)</td> |
| 32 | 7486 <td>Plus/Plus</td> |
| 7487 </tr> | |
| 7488 </table> | |
| 7489 | |
| 7490 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 7491 ||||||| | |
| 7492 Subject 1006 CCGTCGT 1012</pre> | |
| 7493 </div> | |
| 59 | 7494 <div class=hotspot id=hotspot1-38-3> |
| 32 | 7495 <p class=range> |
| 7496 <span class=range>Range 3: 1569 to 1563</span> | |
| 7497 </p> | |
| 7498 | |
| 7499 <table class=hotspotstable> | |
| 7500 <tr> | |
| 7501 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7502 </tr> | |
| 7503 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7504 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7505 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7506 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7507 <td>0/7 (0%)</td> |
| 32 | 7508 <td>Plus/Minus</td> |
| 7509 </tr> | |
| 7510 </table> | |
| 7511 | |
| 7512 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7513 ||||||| | |
| 69 | 7514 Subject 1569 TGAAGAG 1563</pre> |
| 32 | 7515 </div> |
| 7516 | |
| 7517 </div> | |
| 7518 | |
| 59 | 7519 <div class=alignment id=hit1-39> |
| 7520 | |
| 7521 <div class=linkheader> | |
| 7522 <div class=right><a href="#description1-39">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7523 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5B_2?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7524 </div> |
| 7525 | |
| 7526 <div class=title> | |
| 7527 <p class=hittitle>Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A </p> | |
| 7528 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7529 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3U5B_2?report=genbank&log$=nuclalign">gi|364506095|pdb|3U5B|2</a> |
| 32 | 7530 <span class=b>Length:</span> 1800 |
| 7531 <span class=b>Number of Matches:</span> 3 | |
| 7532 </p> | |
| 7533 </div> | |
| 7534 | |
| 59 | 7535 <a class=showmoretitles onclick="toggle_visibility('moretitles1-39'); return false;" href=''> |
| 32 | 7536 See 2 more title(s) |
| 7537 </a> | |
| 7538 | |
| 59 | 7539 <div class=moretitles id=moretitles1-39 style="display: none"> |
| 32 | 7540 <div class=title> |
| 7541 <p class=hittitle>Chain 2, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex </p> | |
| 7542 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7543 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|558704782|pdb|4BYO|2</a> |
| 32 | 7544 </p> |
| 7545 </div> | |
| 7546 <div class=title> | |
| 7547 <p class=hittitle>Chain 2, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 7548 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7549 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|558704824|pdb|4BYV|2</a> |
| 32 | 7550 </p> |
| 7551 </div> | |
| 7552 </div> | |
| 7553 | |
| 59 | 7554 <div class=hotspot id=hotspot1-39-1> |
| 32 | 7555 <p class=range> |
| 7556 <span class=range>Range 1: 1528 to 1536</span> | |
| 7557 </p> | |
| 7558 | |
| 7559 <table class=hotspotstable> | |
| 7560 <tr> | |
| 7561 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7562 </tr> | |
| 7563 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7564 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7565 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7566 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7567 <td>0/9 (0%)</td> |
| 32 | 7568 <td>Plus/Plus</td> |
| 7569 </tr> | |
| 7570 </table> | |
| 7571 | |
| 7572 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 7573 ||||||||| | |
| 7574 Subject 1528 TCCGTCGTG 1536</pre> | |
| 7575 </div> | |
| 59 | 7576 <div class=hotspot id=hotspot1-39-2> |
| 32 | 7577 <p class=range> |
| 7578 <span class=range>Range 2: 1006 to 1012</span> | |
| 7579 </p> | |
| 7580 | |
| 7581 <table class=hotspotstable> | |
| 7582 <tr> | |
| 7583 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7584 </tr> | |
| 7585 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7586 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7587 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7588 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7589 <td>0/7 (0%)</td> |
| 32 | 7590 <td>Plus/Plus</td> |
| 7591 </tr> | |
| 7592 </table> | |
| 7593 | |
| 7594 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 7595 ||||||| | |
| 7596 Subject 1006 CCGTCGT 1012</pre> | |
| 7597 </div> | |
| 59 | 7598 <div class=hotspot id=hotspot1-39-3> |
| 32 | 7599 <p class=range> |
| 7600 <span class=range>Range 3: 1569 to 1563</span> | |
| 7601 </p> | |
| 7602 | |
| 7603 <table class=hotspotstable> | |
| 7604 <tr> | |
| 7605 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7606 </tr> | |
| 7607 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7608 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7609 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7610 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7611 <td>0/7 (0%)</td> |
| 32 | 7612 <td>Plus/Minus</td> |
| 7613 </tr> | |
| 7614 </table> | |
| 7615 | |
| 7616 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7617 ||||||| | |
| 69 | 7618 Subject 1569 TGAAGAG 1563</pre> |
| 32 | 7619 </div> |
| 7620 | |
| 7621 </div> | |
| 7622 | |
| 59 | 7623 <div class=alignment id=hit1-40> |
| 7624 | |
| 7625 <div class=linkheader> | |
| 7626 <div class=right><a href="#description1-40">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7627 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1D_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7628 </div> |
| 7629 | |
| 7630 <div class=title> | |
| 7631 <p class=hittitle>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4.</p> | |
| 7632 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7633 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1D_1?report=genbank&log$=nuclalign">gi|358440203|pdb|4A1D|1</a> |
| 32 | 7634 <span class=b>Length:</span> 3119 |
| 7635 <span class=b>Number of Matches:</span> 3 | |
| 7636 </p> | |
| 7637 </div> | |
| 7638 | |
| 7639 | |
| 59 | 7640 <div class=hotspot id=hotspot1-40-1> |
| 32 | 7641 <p class=range> |
| 7642 <span class=range>Range 1: 2280 to 2288</span> | |
| 7643 </p> | |
| 7644 | |
| 7645 <table class=hotspotstable> | |
| 7646 <tr> | |
| 7647 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7648 </tr> | |
| 7649 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7650 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7651 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7652 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7653 <td>0/9 (0%)</td> |
| 32 | 7654 <td>Plus/Plus</td> |
| 7655 </tr> | |
| 7656 </table> | |
| 7657 | |
| 7658 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 7659 ||||||||| | |
| 7660 Subject 2280 TCGTGAAGA 2288</pre> | |
| 7661 </div> | |
| 59 | 7662 <div class=hotspot id=hotspot1-40-2> |
| 32 | 7663 <p class=range> |
| 7664 <span class=range>Range 2: 2714 to 2722</span> | |
| 7665 </p> | |
| 7666 | |
| 7667 <table class=hotspotstable> | |
| 7668 <tr> | |
| 7669 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7670 </tr> | |
| 7671 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7672 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7673 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7674 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7675 <td>0/9 (0%)</td> |
| 32 | 7676 <td>Plus/Plus</td> |
| 7677 </tr> | |
| 7678 </table> | |
| 7679 | |
| 7680 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7681 ||||||||| | |
| 7682 Subject 2714 CCGTCGTGA 2722</pre> | |
| 7683 </div> | |
| 59 | 7684 <div class=hotspot id=hotspot1-40-3> |
| 32 | 7685 <p class=range> |
| 7686 <span class=range>Range 3: 2838 to 2844</span> | |
| 7687 </p> | |
| 7688 | |
| 7689 <table class=hotspotstable> | |
| 7690 <tr> | |
| 7691 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7692 </tr> | |
| 7693 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7694 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7695 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7696 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7697 <td>0/7 (0%)</td> |
| 32 | 7698 <td>Plus/Plus</td> |
| 7699 </tr> | |
| 7700 </table> | |
| 7701 | |
| 7702 <pre class=alignmentgraphic>Query 8 CGTGAAG 14 | |
| 7703 ||||||| | |
| 7704 Subject 2838 CGTGAAG 2844</pre> | |
| 7705 </div> | |
| 7706 | |
| 7707 </div> | |
| 7708 | |
| 59 | 7709 <div class=alignment id=hit1-41> |
| 7710 | |
| 7711 <div class=linkheader> | |
| 7712 <div class=right><a href="#description1-41">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7713 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A18_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7714 </div> |
| 7715 | |
| 7716 <div class=title> | |
| 7717 <p class=hittitle>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1</p> | |
| 7718 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7719 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A18_1?report=genbank&log$=nuclalign">gi|358440111|pdb|4A18|1</a> |
| 32 | 7720 <span class=b>Length:</span> 3354 |
| 7721 <span class=b>Number of Matches:</span> 3 | |
| 7722 </p> | |
| 7723 </div> | |
| 7724 | |
| 7725 | |
| 59 | 7726 <div class=hotspot id=hotspot1-41-1> |
| 32 | 7727 <p class=range> |
| 7728 <span class=range>Range 1: 2513 to 2521</span> | |
| 7729 </p> | |
| 7730 | |
| 7731 <table class=hotspotstable> | |
| 7732 <tr> | |
| 7733 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7734 </tr> | |
| 7735 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7736 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7737 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7738 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7739 <td>0/9 (0%)</td> |
| 32 | 7740 <td>Plus/Plus</td> |
| 7741 </tr> | |
| 7742 </table> | |
| 7743 | |
| 7744 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 7745 ||||||||| | |
| 7746 Subject 2513 TCGTGAAGA 2521</pre> | |
| 7747 </div> | |
| 59 | 7748 <div class=hotspot id=hotspot1-41-2> |
| 32 | 7749 <p class=range> |
| 7750 <span class=range>Range 2: 2947 to 2955</span> | |
| 7751 </p> | |
| 7752 | |
| 7753 <table class=hotspotstable> | |
| 7754 <tr> | |
| 7755 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7756 </tr> | |
| 7757 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7758 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7759 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7760 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7761 <td>0/9 (0%)</td> |
| 32 | 7762 <td>Plus/Plus</td> |
| 7763 </tr> | |
| 7764 </table> | |
| 7765 | |
| 7766 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7767 ||||||||| | |
| 7768 Subject 2947 CCGTCGTGA 2955</pre> | |
| 7769 </div> | |
| 59 | 7770 <div class=hotspot id=hotspot1-41-3> |
| 32 | 7771 <p class=range> |
| 7772 <span class=range>Range 3: 3071 to 3077</span> | |
| 7773 </p> | |
| 7774 | |
| 7775 <table class=hotspotstable> | |
| 7776 <tr> | |
| 7777 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7778 </tr> | |
| 7779 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7780 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7781 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7782 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7783 <td>0/7 (0%)</td> |
| 32 | 7784 <td>Plus/Plus</td> |
| 7785 </tr> | |
| 7786 </table> | |
| 7787 | |
| 7788 <pre class=alignmentgraphic>Query 8 CGTGAAG 14 | |
| 7789 ||||||| | |
| 7790 Subject 3071 CGTGAAG 3077</pre> | |
| 7791 </div> | |
| 7792 | |
| 7793 </div> | |
| 7794 | |
| 59 | 7795 <div class=alignment id=hit1-42> |
| 7796 | |
| 7797 <div class=linkheader> | |
| 7798 <div class=right><a href="#description1-42">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7799 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1B_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7800 </div> |
| 7801 | |
| 7802 <div class=title> | |
| 7803 <p class=hittitle>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. </p> | |
| 7804 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7805 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4A1B_1?report=genbank&log$=nuclalign">gi|358440157|pdb|4A1B|1</a> |
| 32 | 7806 <span class=b>Length:</span> 3354 |
| 7807 <span class=b>Number of Matches:</span> 3 | |
| 7808 </p> | |
| 7809 </div> | |
| 7810 | |
| 59 | 7811 <a class=showmoretitles onclick="toggle_visibility('moretitles1-42'); return false;" href=''> |
| 32 | 7812 See 1 more title(s) |
| 7813 </a> | |
| 7814 | |
| 59 | 7815 <div class=moretitles id=moretitles1-42 style="display: none"> |
| 32 | 7816 <div class=title> |
| 7817 <p class=hittitle>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 2.</p> | |
| 7818 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7819 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|359807703|pdb|4A19|1</a> |
| 32 | 7820 </p> |
| 7821 </div> | |
| 7822 </div> | |
| 7823 | |
| 59 | 7824 <div class=hotspot id=hotspot1-42-1> |
| 32 | 7825 <p class=range> |
| 7826 <span class=range>Range 1: 2513 to 2521</span> | |
| 7827 </p> | |
| 7828 | |
| 7829 <table class=hotspotstable> | |
| 7830 <tr> | |
| 7831 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7832 </tr> | |
| 7833 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7834 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7835 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7836 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7837 <td>0/9 (0%)</td> |
| 32 | 7838 <td>Plus/Plus</td> |
| 7839 </tr> | |
| 7840 </table> | |
| 7841 | |
| 7842 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 7843 ||||||||| | |
| 7844 Subject 2513 TCGTGAAGA 2521</pre> | |
| 7845 </div> | |
| 59 | 7846 <div class=hotspot id=hotspot1-42-2> |
| 32 | 7847 <p class=range> |
| 7848 <span class=range>Range 2: 2947 to 2955</span> | |
| 7849 </p> | |
| 7850 | |
| 7851 <table class=hotspotstable> | |
| 7852 <tr> | |
| 7853 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7854 </tr> | |
| 7855 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7856 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7857 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7858 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7859 <td>0/9 (0%)</td> |
| 32 | 7860 <td>Plus/Plus</td> |
| 7861 </tr> | |
| 7862 </table> | |
| 7863 | |
| 7864 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7865 ||||||||| | |
| 7866 Subject 2947 CCGTCGTGA 2955</pre> | |
| 7867 </div> | |
| 59 | 7868 <div class=hotspot id=hotspot1-42-3> |
| 32 | 7869 <p class=range> |
| 7870 <span class=range>Range 3: 3071 to 3077</span> | |
| 7871 </p> | |
| 7872 | |
| 7873 <table class=hotspotstable> | |
| 7874 <tr> | |
| 7875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7876 </tr> | |
| 7877 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7878 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7879 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7880 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7881 <td>0/7 (0%)</td> |
| 32 | 7882 <td>Plus/Plus</td> |
| 7883 </tr> | |
| 7884 </table> | |
| 7885 | |
| 7886 <pre class=alignmentgraphic>Query 8 CGTGAAG 14 | |
| 7887 ||||||| | |
| 7888 Subject 3071 CGTGAAG 3077</pre> | |
| 7889 </div> | |
| 7890 | |
| 7891 </div> | |
| 7892 | |
| 59 | 7893 <div class=alignment id=hit1-43> |
| 7894 | |
| 7895 <div class=linkheader> | |
| 7896 <div class=right><a href="#description1-43">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7897 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0L_8?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7898 </div> |
| 7899 | |
| 7900 <div class=title> | |
| 7901 <p class=hittitle>Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1</p> | |
| 7902 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7903 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0L_8?report=genbank&log$=nuclalign">gi|357380452|pdb|3J0L|8</a> |
| 32 | 7904 <span class=b>Length:</span> 20 |
| 7905 <span class=b>Number of Matches:</span> 1 | |
| 7906 </p> | |
| 7907 </div> | |
| 7908 | |
| 7909 | |
| 59 | 7910 <div class=hotspot id=hotspot1-43-1> |
| 32 | 7911 <p class=range> |
| 7912 <span class=range>Range 1: 3 to 11</span> | |
| 7913 </p> | |
| 7914 | |
| 7915 <table class=hotspotstable> | |
| 7916 <tr> | |
| 7917 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7918 </tr> | |
| 7919 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7920 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7921 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7922 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7923 <td>0/9 (0%)</td> |
| 32 | 7924 <td>Plus/Plus</td> |
| 7925 </tr> | |
| 7926 </table> | |
| 7927 | |
| 7928 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7929 ||||||||| | |
| 7930 Subject 3 CCGTCGTGA 11</pre> | |
| 7931 </div> | |
| 7932 | |
| 7933 </div> | |
| 7934 | |
| 59 | 7935 <div class=alignment id=hit1-44> |
| 7936 | |
| 7937 <div class=linkheader> | |
| 7938 <div class=right><a href="#description1-44">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7939 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0O_8?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7940 </div> |
| 7941 | |
| 7942 <div class=title> | |
| 7943 <p class=hittitle>Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2</p> | |
| 7944 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7945 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J0O_8?report=genbank&log$=nuclalign">gi|357380483|pdb|3J0O|8</a> |
| 32 | 7946 <span class=b>Length:</span> 20 |
| 7947 <span class=b>Number of Matches:</span> 1 | |
| 7948 </p> | |
| 7949 </div> | |
| 7950 | |
| 7951 | |
| 59 | 7952 <div class=hotspot id=hotspot1-44-1> |
| 32 | 7953 <p class=range> |
| 7954 <span class=range>Range 1: 3 to 11</span> | |
| 7955 </p> | |
| 7956 | |
| 7957 <table class=hotspotstable> | |
| 7958 <tr> | |
| 7959 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7960 </tr> | |
| 7961 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7962 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7963 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7964 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7965 <td>0/9 (0%)</td> |
| 32 | 7966 <td>Plus/Plus</td> |
| 7967 </tr> | |
| 7968 </table> | |
| 7969 | |
| 7970 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7971 ||||||||| | |
| 7972 Subject 3 CCGTCGTGA 11</pre> | |
| 7973 </div> | |
| 7974 | |
| 7975 </div> | |
| 7976 | |
| 59 | 7977 <div class=alignment id=hit1-45> |
| 7978 | |
| 7979 <div class=linkheader> | |
| 7980 <div class=right><a href="#description1-45">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7981 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O58_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 7982 </div> |
| 7983 | |
| 7984 <div class=title> | |
| 7985 <p class=hittitle>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. </p> | |
| 7986 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
7987 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O58_1?report=genbank&log$=nuclalign">gi|315113523|pdb|3O58|1</a> |
| 32 | 7988 <span class=b>Length:</span> 3396 |
| 7989 <span class=b>Number of Matches:</span> 5 | |
| 7990 </p> | |
| 7991 </div> | |
| 7992 | |
| 59 | 7993 <a class=showmoretitles onclick="toggle_visibility('moretitles1-45'); return false;" href=''> |
| 32 | 7994 See 2 more title(s) |
| 7995 </a> | |
| 7996 | |
| 59 | 7997 <div class=moretitles id=moretitles1-45 style="display: none"> |
| 32 | 7998 <div class=title> |
| 7999 <p class=hittitle>Chain 5, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1 </p> | |
| 8000 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8001 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|418837761|pdb|4B6B|5</a> |
| 32 | 8002 </p> |
| 8003 </div> | |
| 8004 <div class=title> | |
| 8005 <p class=hittitle>Chain 1, Arx1 Pre-60s Particle. This Entry Contains The Rrna.</p> | |
| 8006 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8007 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|597959861|pdb|3J64|1</a> |
| 32 | 8008 </p> |
| 8009 </div> | |
| 8010 </div> | |
| 8011 | |
| 59 | 8012 <div class=hotspot id=hotspot1-45-1> |
| 32 | 8013 <p class=range> |
| 8014 <span class=range>Range 1: 2959 to 2967</span> | |
| 8015 </p> | |
| 8016 | |
| 8017 <table class=hotspotstable> | |
| 8018 <tr> | |
| 8019 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8020 </tr> | |
| 8021 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8022 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8023 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8024 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8025 <td>0/9 (0%)</td> |
| 32 | 8026 <td>Plus/Plus</td> |
| 8027 </tr> | |
| 8028 </table> | |
| 8029 | |
| 8030 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8031 ||||||||| | |
| 8032 Subject 2959 CCGTCGTGA 2967</pre> | |
| 8033 </div> | |
| 59 | 8034 <div class=hotspot id=hotspot1-45-2> |
| 32 | 8035 <p class=range> |
| 8036 <span class=range>Range 2: 1634 to 1627</span> | |
| 8037 </p> | |
| 8038 | |
| 8039 <table class=hotspotstable> | |
| 8040 <tr> | |
| 8041 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8042 </tr> | |
| 8043 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8044 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8045 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8046 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8047 <td>0/8 (0%)</td> |
| 32 | 8048 <td>Plus/Minus</td> |
| 8049 </tr> | |
| 8050 </table> | |
| 8051 | |
| 8052 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 8053 |||||||| | |
| 69 | 8054 Subject 1634 CGTGAAGA 1627</pre> |
| 32 | 8055 </div> |
| 59 | 8056 <div class=hotspot id=hotspot1-45-3> |
| 32 | 8057 <p class=range> |
| 8058 <span class=range>Range 3: 2435 to 2442</span> | |
| 8059 </p> | |
| 8060 | |
| 8061 <table class=hotspotstable> | |
| 8062 <tr> | |
| 8063 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8064 </tr> | |
| 8065 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8066 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8067 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8068 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8069 <td>0/8 (0%)</td> |
| 32 | 8070 <td>Plus/Plus</td> |
| 8071 </tr> | |
| 8072 </table> | |
| 8073 | |
| 8074 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 8075 |||||||| | |
| 8076 Subject 2435 GTGAAGAG 2442</pre> | |
| 8077 </div> | |
| 59 | 8078 <div class=hotspot id=hotspot1-45-4> |
| 32 | 8079 <p class=range> |
| 8080 <span class=range>Range 4: 1100 to 1106</span> | |
| 8081 </p> | |
| 8082 | |
| 8083 <table class=hotspotstable> | |
| 8084 <tr> | |
| 8085 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8086 </tr> | |
| 8087 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8088 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8089 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8090 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8091 <td>0/7 (0%)</td> |
| 32 | 8092 <td>Plus/Plus</td> |
| 8093 </tr> | |
| 8094 </table> | |
| 8095 | |
| 8096 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8097 ||||||| | |
| 8098 Subject 1100 TGAAGAG 1106</pre> | |
| 8099 </div> | |
| 59 | 8100 <div class=hotspot id=hotspot1-45-5> |
| 32 | 8101 <p class=range> |
| 8102 <span class=range>Range 5: 2216 to 2222</span> | |
| 8103 </p> | |
| 8104 | |
| 8105 <table class=hotspotstable> | |
| 8106 <tr> | |
| 8107 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8108 </tr> | |
| 8109 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8110 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8111 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8112 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8113 <td>0/7 (0%)</td> |
| 32 | 8114 <td>Plus/Plus</td> |
| 8115 </tr> | |
| 8116 </table> | |
| 8117 | |
| 8118 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 8119 ||||||| | |
| 8120 Subject 2216 GTGAAGA 2222</pre> | |
| 8121 </div> | |
| 8122 | |
| 8123 </div> | |
| 8124 | |
| 59 | 8125 <div class=alignment id=hit1-46> |
| 8126 | |
| 8127 <div class=linkheader> | |
| 8128 <div class=right><a href="#description1-46">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8129 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O5H_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8130 </div> |
| 8131 | |
| 8132 <div class=title> | |
| 8133 <p class=hittitle>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. </p> | |
| 8134 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8135 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O5H_1?report=genbank&log$=nuclalign">gi|315113568|pdb|3O5H|1</a> |
| 32 | 8136 <span class=b>Length:</span> 3396 |
| 8137 <span class=b>Number of Matches:</span> 5 | |
| 8138 </p> | |
| 8139 </div> | |
| 8140 | |
| 59 | 8141 <a class=showmoretitles onclick="toggle_visibility('moretitles1-46'); return false;" href=''> |
| 32 | 8142 See 2 more title(s) |
| 8143 </a> | |
| 8144 | |
| 59 | 8145 <div class=moretitles id=moretitles1-46 style="display: none"> |
| 32 | 8146 <div class=title> |
| 8147 <p class=hittitle>Chain 1, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 60s Subunit, Ribosome A </p> | |
| 8148 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8149 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|364506130|pdb|3U5D|1</a> |
| 32 | 8150 </p> |
| 8151 </div> | |
| 8152 <div class=title> | |
| 8153 <p class=hittitle>Chain 5, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 60s Subunit, Ribosome B</p> | |
| 8154 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8155 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|364506168|pdb|3U5H|5</a> |
| 32 | 8156 </p> |
| 8157 </div> | |
| 8158 </div> | |
| 8159 | |
| 59 | 8160 <div class=hotspot id=hotspot1-46-1> |
| 32 | 8161 <p class=range> |
| 8162 <span class=range>Range 1: 2959 to 2967</span> | |
| 8163 </p> | |
| 8164 | |
| 8165 <table class=hotspotstable> | |
| 8166 <tr> | |
| 8167 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8168 </tr> | |
| 8169 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8170 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8171 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8172 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8173 <td>0/9 (0%)</td> |
| 32 | 8174 <td>Plus/Plus</td> |
| 8175 </tr> | |
| 8176 </table> | |
| 8177 | |
| 8178 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8179 ||||||||| | |
| 8180 Subject 2959 CCGTCGTGA 2967</pre> | |
| 8181 </div> | |
| 59 | 8182 <div class=hotspot id=hotspot1-46-2> |
| 32 | 8183 <p class=range> |
| 8184 <span class=range>Range 2: 1634 to 1627</span> | |
| 8185 </p> | |
| 8186 | |
| 8187 <table class=hotspotstable> | |
| 8188 <tr> | |
| 8189 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8190 </tr> | |
| 8191 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8192 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8193 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8194 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8195 <td>0/8 (0%)</td> |
| 32 | 8196 <td>Plus/Minus</td> |
| 8197 </tr> | |
| 8198 </table> | |
| 8199 | |
| 8200 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 8201 |||||||| | |
| 69 | 8202 Subject 1634 CGTGAAGA 1627</pre> |
| 32 | 8203 </div> |
| 59 | 8204 <div class=hotspot id=hotspot1-46-3> |
| 32 | 8205 <p class=range> |
| 8206 <span class=range>Range 3: 2435 to 2442</span> | |
| 8207 </p> | |
| 8208 | |
| 8209 <table class=hotspotstable> | |
| 8210 <tr> | |
| 8211 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8212 </tr> | |
| 8213 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8214 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8215 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8216 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8217 <td>0/8 (0%)</td> |
| 32 | 8218 <td>Plus/Plus</td> |
| 8219 </tr> | |
| 8220 </table> | |
| 8221 | |
| 8222 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 8223 |||||||| | |
| 8224 Subject 2435 GTGAAGAG 2442</pre> | |
| 8225 </div> | |
| 59 | 8226 <div class=hotspot id=hotspot1-46-4> |
| 32 | 8227 <p class=range> |
| 8228 <span class=range>Range 4: 1100 to 1106</span> | |
| 8229 </p> | |
| 8230 | |
| 8231 <table class=hotspotstable> | |
| 8232 <tr> | |
| 8233 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8234 </tr> | |
| 8235 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8236 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8237 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8238 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8239 <td>0/7 (0%)</td> |
| 32 | 8240 <td>Plus/Plus</td> |
| 8241 </tr> | |
| 8242 </table> | |
| 8243 | |
| 8244 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8245 ||||||| | |
| 8246 Subject 1100 TGAAGAG 1106</pre> | |
| 8247 </div> | |
| 59 | 8248 <div class=hotspot id=hotspot1-46-5> |
| 32 | 8249 <p class=range> |
| 8250 <span class=range>Range 5: 2216 to 2222</span> | |
| 8251 </p> | |
| 8252 | |
| 8253 <table class=hotspotstable> | |
| 8254 <tr> | |
| 8255 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8256 </tr> | |
| 8257 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8258 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8259 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8260 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8261 <td>0/7 (0%)</td> |
| 32 | 8262 <td>Plus/Plus</td> |
| 8263 </tr> | |
| 8264 </table> | |
| 8265 | |
| 8266 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 8267 ||||||| | |
| 8268 Subject 2216 GTGAAGA 2222</pre> | |
| 8269 </div> | |
| 8270 | |
| 8271 </div> | |
| 8272 | |
| 59 | 8273 <div class=alignment id=hit1-47> |
| 8274 | |
| 8275 <div class=linkheader> | |
| 8276 <div class=right><a href="#description1-47">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8277 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O2Z_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8278 </div> |
| 8279 | |
| 8280 <div class=title> | |
| 8281 <p class=hittitle>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit.</p> | |
| 8282 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8283 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O2Z_1?report=genbank&log$=nuclalign">gi|315113447|pdb|3O2Z|1</a> |
| 32 | 8284 <span class=b>Length:</span> 1800 |
| 8285 <span class=b>Number of Matches:</span> 3 | |
| 8286 </p> | |
| 8287 </div> | |
| 8288 | |
| 8289 | |
| 59 | 8290 <div class=hotspot id=hotspot1-47-1> |
| 32 | 8291 <p class=range> |
| 8292 <span class=range>Range 1: 1528 to 1536</span> | |
| 8293 </p> | |
| 8294 | |
| 8295 <table class=hotspotstable> | |
| 8296 <tr> | |
| 8297 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8298 </tr> | |
| 8299 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8300 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8301 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8302 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8303 <td>0/9 (0%)</td> |
| 32 | 8304 <td>Plus/Plus</td> |
| 8305 </tr> | |
| 8306 </table> | |
| 8307 | |
| 8308 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 8309 ||||||||| | |
| 8310 Subject 1528 TCCGTCGTG 1536</pre> | |
| 8311 </div> | |
| 59 | 8312 <div class=hotspot id=hotspot1-47-2> |
| 32 | 8313 <p class=range> |
| 8314 <span class=range>Range 2: 1006 to 1012</span> | |
| 8315 </p> | |
| 8316 | |
| 8317 <table class=hotspotstable> | |
| 8318 <tr> | |
| 8319 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8320 </tr> | |
| 8321 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8322 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8323 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8324 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8325 <td>0/7 (0%)</td> |
| 32 | 8326 <td>Plus/Plus</td> |
| 8327 </tr> | |
| 8328 </table> | |
| 8329 | |
| 8330 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 8331 ||||||| | |
| 8332 Subject 1006 CCGTCGT 1012</pre> | |
| 8333 </div> | |
| 59 | 8334 <div class=hotspot id=hotspot1-47-3> |
| 32 | 8335 <p class=range> |
| 8336 <span class=range>Range 3: 1569 to 1563</span> | |
| 8337 </p> | |
| 8338 | |
| 8339 <table class=hotspotstable> | |
| 8340 <tr> | |
| 8341 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8342 </tr> | |
| 8343 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8344 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8345 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8346 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8347 <td>0/7 (0%)</td> |
| 32 | 8348 <td>Plus/Minus</td> |
| 8349 </tr> | |
| 8350 </table> | |
| 8351 | |
| 8352 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8353 ||||||| | |
| 69 | 8354 Subject 1569 TGAAGAG 1563</pre> |
| 32 | 8355 </div> |
| 8356 | |
| 8357 </div> | |
| 8358 | |
| 59 | 8359 <div class=alignment id=hit1-48> |
| 8360 | |
| 8361 <div class=linkheader> | |
| 8362 <div class=right><a href="#description1-48">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8363 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O30_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8364 </div> |
| 8365 | |
| 8366 <div class=title> | |
| 8367 <p class=hittitle>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit.</p> | |
| 8368 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8369 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3O30_1?report=genbank&log$=nuclalign">gi|315113475|pdb|3O30|1</a> |
| 32 | 8370 <span class=b>Length:</span> 1800 |
| 8371 <span class=b>Number of Matches:</span> 3 | |
| 8372 </p> | |
| 8373 </div> | |
| 8374 | |
| 8375 | |
| 59 | 8376 <div class=hotspot id=hotspot1-48-1> |
| 32 | 8377 <p class=range> |
| 8378 <span class=range>Range 1: 1528 to 1536</span> | |
| 8379 </p> | |
| 8380 | |
| 8381 <table class=hotspotstable> | |
| 8382 <tr> | |
| 8383 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8384 </tr> | |
| 8385 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8386 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8387 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8388 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8389 <td>0/9 (0%)</td> |
| 32 | 8390 <td>Plus/Plus</td> |
| 8391 </tr> | |
| 8392 </table> | |
| 8393 | |
| 8394 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 8395 ||||||||| | |
| 8396 Subject 1528 TCCGTCGTG 1536</pre> | |
| 8397 </div> | |
| 59 | 8398 <div class=hotspot id=hotspot1-48-2> |
| 32 | 8399 <p class=range> |
| 8400 <span class=range>Range 2: 1006 to 1012</span> | |
| 8401 </p> | |
| 8402 | |
| 8403 <table class=hotspotstable> | |
| 8404 <tr> | |
| 8405 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8406 </tr> | |
| 8407 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8408 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8409 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8410 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8411 <td>0/7 (0%)</td> |
| 32 | 8412 <td>Plus/Plus</td> |
| 8413 </tr> | |
| 8414 </table> | |
| 8415 | |
| 8416 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 8417 ||||||| | |
| 8418 Subject 1006 CCGTCGT 1012</pre> | |
| 8419 </div> | |
| 59 | 8420 <div class=hotspot id=hotspot1-48-3> |
| 32 | 8421 <p class=range> |
| 8422 <span class=range>Range 3: 1569 to 1563</span> | |
| 8423 </p> | |
| 8424 | |
| 8425 <table class=hotspotstable> | |
| 8426 <tr> | |
| 8427 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8428 </tr> | |
| 8429 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8430 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8431 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8432 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8433 <td>0/7 (0%)</td> |
| 32 | 8434 <td>Plus/Minus</td> |
| 8435 </tr> | |
| 8436 </table> | |
| 8437 | |
| 8438 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8439 ||||||| | |
| 69 | 8440 Subject 1569 TGAAGAG 1563</pre> |
| 32 | 8441 </div> |
| 8442 | |
| 8443 </div> | |
| 8444 | |
| 59 | 8445 <div class=alignment id=hit1-49> |
| 8446 | |
| 8447 <div class=linkheader> | |
| 8448 <div class=right><a href="#description1-49">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8449 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZF_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8450 </div> |
| 8451 | |
| 8452 <div class=title> | |
| 8453 <p class=hittitle>Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)</p> | |
| 8454 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8455 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZF_A?report=genbank&log$=nuclalign">gi|313103747|pdb|3IZF|A</a> |
| 32 | 8456 <span class=b>Length:</span> 3396 |
| 8457 <span class=b>Number of Matches:</span> 5 | |
| 8458 </p> | |
| 8459 </div> | |
| 8460 | |
| 8461 | |
| 59 | 8462 <div class=hotspot id=hotspot1-49-1> |
| 32 | 8463 <p class=range> |
| 8464 <span class=range>Range 1: 2959 to 2967</span> | |
| 8465 </p> | |
| 8466 | |
| 8467 <table class=hotspotstable> | |
| 8468 <tr> | |
| 8469 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8470 </tr> | |
| 8471 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8472 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8473 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8474 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8475 <td>0/9 (0%)</td> |
| 32 | 8476 <td>Plus/Plus</td> |
| 8477 </tr> | |
| 8478 </table> | |
| 8479 | |
| 8480 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8481 ||||||||| | |
| 8482 Subject 2959 CCGTCGTGA 2967</pre> | |
| 8483 </div> | |
| 59 | 8484 <div class=hotspot id=hotspot1-49-2> |
| 32 | 8485 <p class=range> |
| 8486 <span class=range>Range 2: 1634 to 1627</span> | |
| 8487 </p> | |
| 8488 | |
| 8489 <table class=hotspotstable> | |
| 8490 <tr> | |
| 8491 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8492 </tr> | |
| 8493 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8494 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8495 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8496 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8497 <td>0/8 (0%)</td> |
| 32 | 8498 <td>Plus/Minus</td> |
| 8499 </tr> | |
| 8500 </table> | |
| 8501 | |
| 8502 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 8503 |||||||| | |
| 69 | 8504 Subject 1634 CGTGAAGA 1627</pre> |
| 32 | 8505 </div> |
| 59 | 8506 <div class=hotspot id=hotspot1-49-3> |
| 32 | 8507 <p class=range> |
| 8508 <span class=range>Range 3: 2435 to 2442</span> | |
| 8509 </p> | |
| 8510 | |
| 8511 <table class=hotspotstable> | |
| 8512 <tr> | |
| 8513 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8514 </tr> | |
| 8515 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8516 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8517 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8518 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8519 <td>0/8 (0%)</td> |
| 32 | 8520 <td>Plus/Plus</td> |
| 8521 </tr> | |
| 8522 </table> | |
| 8523 | |
| 8524 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 8525 |||||||| | |
| 8526 Subject 2435 GTGAAGAG 2442</pre> | |
| 8527 </div> | |
| 59 | 8528 <div class=hotspot id=hotspot1-49-4> |
| 32 | 8529 <p class=range> |
| 8530 <span class=range>Range 4: 1100 to 1106</span> | |
| 8531 </p> | |
| 8532 | |
| 8533 <table class=hotspotstable> | |
| 8534 <tr> | |
| 8535 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8536 </tr> | |
| 8537 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8538 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8539 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8540 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8541 <td>0/7 (0%)</td> |
| 32 | 8542 <td>Plus/Plus</td> |
| 8543 </tr> | |
| 8544 </table> | |
| 8545 | |
| 8546 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8547 ||||||| | |
| 8548 Subject 1100 TGAAGAG 1106</pre> | |
| 8549 </div> | |
| 59 | 8550 <div class=hotspot id=hotspot1-49-5> |
| 32 | 8551 <p class=range> |
| 8552 <span class=range>Range 5: 2216 to 2222</span> | |
| 8553 </p> | |
| 8554 | |
| 8555 <table class=hotspotstable> | |
| 8556 <tr> | |
| 8557 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8558 </tr> | |
| 8559 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8560 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8561 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8562 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8563 <td>0/7 (0%)</td> |
| 32 | 8564 <td>Plus/Plus</td> |
| 8565 </tr> | |
| 8566 </table> | |
| 8567 | |
| 8568 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 8569 ||||||| | |
| 8570 Subject 2216 GTGAAGA 2222</pre> | |
| 8571 </div> | |
| 8572 | |
| 8573 </div> | |
| 8574 | |
| 59 | 8575 <div class=alignment id=hit1-50> |
| 8576 | |
| 8577 <div class=linkheader> | |
| 8578 <div class=right><a href="#description1-50">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8579 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZE_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8580 </div> |
| 8581 | |
| 8582 <div class=title> | |
| 8583 <p class=hittitle>Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome</p> | |
| 8584 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8585 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3IZE_A?report=genbank&log$=nuclalign">gi|313103744|pdb|3IZE|A</a> |
| 32 | 8586 <span class=b>Length:</span> 1800 |
| 8587 <span class=b>Number of Matches:</span> 3 | |
| 8588 </p> | |
| 8589 </div> | |
| 8590 | |
| 8591 | |
| 59 | 8592 <div class=hotspot id=hotspot1-50-1> |
| 32 | 8593 <p class=range> |
| 8594 <span class=range>Range 1: 1528 to 1536</span> | |
| 8595 </p> | |
| 8596 | |
| 8597 <table class=hotspotstable> | |
| 8598 <tr> | |
| 8599 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8600 </tr> | |
| 8601 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8602 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8603 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8604 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8605 <td>0/9 (0%)</td> |
| 32 | 8606 <td>Plus/Plus</td> |
| 8607 </tr> | |
| 8608 </table> | |
| 8609 | |
| 8610 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 8611 ||||||||| | |
| 8612 Subject 1528 TCCGTCGTG 1536</pre> | |
| 8613 </div> | |
| 59 | 8614 <div class=hotspot id=hotspot1-50-2> |
| 32 | 8615 <p class=range> |
| 8616 <span class=range>Range 2: 1006 to 1012</span> | |
| 8617 </p> | |
| 8618 | |
| 8619 <table class=hotspotstable> | |
| 8620 <tr> | |
| 8621 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8622 </tr> | |
| 8623 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8624 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8625 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8626 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8627 <td>0/7 (0%)</td> |
| 32 | 8628 <td>Plus/Plus</td> |
| 8629 </tr> | |
| 8630 </table> | |
| 8631 | |
| 8632 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 8633 ||||||| | |
| 8634 Subject 1006 CCGTCGT 1012</pre> | |
| 8635 </div> | |
| 59 | 8636 <div class=hotspot id=hotspot1-50-3> |
| 32 | 8637 <p class=range> |
| 8638 <span class=range>Range 3: 1569 to 1563</span> | |
| 8639 </p> | |
| 8640 | |
| 8641 <table class=hotspotstable> | |
| 8642 <tr> | |
| 8643 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8644 </tr> | |
| 8645 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8646 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8647 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8648 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8649 <td>0/7 (0%)</td> |
| 32 | 8650 <td>Plus/Minus</td> |
| 8651 </tr> | |
| 8652 </table> | |
| 8653 | |
| 8654 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 8655 ||||||| | |
| 69 | 8656 Subject 1569 TGAAGAG 1563</pre> |
| 32 | 8657 </div> |
| 8658 | |
| 8659 </div> | |
| 8660 | |
| 59 | 8661 <div class=alignment id=hit1-51> |
| 8662 | |
| 8663 <div class=linkheader> | |
| 8664 <div class=right><a href="#description1-51">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8665 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_I?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8666 </div> |
| 8667 | |
| 8668 <div class=title> | |
| 8669 <p class=hittitle>Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</p> | |
| 8670 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8671 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_I?report=genbank&log$=nuclalign">gi|296278448|pdb|3KO2|I</a> |
| 32 | 8672 <span class=b>Length:</span> 24 |
| 8673 <span class=b>Number of Matches:</span> 1 | |
| 8674 </p> | |
| 8675 </div> | |
| 8676 | |
| 8677 | |
| 59 | 8678 <div class=hotspot id=hotspot1-51-1> |
| 32 | 8679 <p class=range> |
| 8680 <span class=range>Range 1: 19 to 11</span> | |
| 8681 </p> | |
| 8682 | |
| 8683 <table class=hotspotstable> | |
| 8684 <tr> | |
| 8685 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8686 </tr> | |
| 8687 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8688 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8689 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8690 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8691 <td>0/9 (0%)</td> |
| 32 | 8692 <td>Plus/Minus</td> |
| 8693 </tr> | |
| 8694 </table> | |
| 8695 | |
| 8696 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8697 ||||||||| | |
| 69 | 8698 Subject 19 CCGTCGTGA 11</pre> |
| 32 | 8699 </div> |
| 8700 | |
| 8701 </div> | |
| 8702 | |
| 59 | 8703 <div class=alignment id=hit1-52> |
| 8704 | |
| 8705 <div class=linkheader> | |
| 8706 <div class=right><a href="#description1-52">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8707 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_H?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8708 </div> |
| 8709 | |
| 8710 <div class=title> | |
| 8711 <p class=hittitle>Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</p> | |
| 8712 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8713 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_H?report=genbank&log$=nuclalign">gi|296278447|pdb|3KO2|H</a> |
| 32 | 8714 <span class=b>Length:</span> 24 |
| 8715 <span class=b>Number of Matches:</span> 1 | |
| 8716 </p> | |
| 8717 </div> | |
| 8718 | |
| 8719 | |
| 59 | 8720 <div class=hotspot id=hotspot1-52-1> |
| 32 | 8721 <p class=range> |
| 8722 <span class=range>Range 1: 6 to 14</span> | |
| 8723 </p> | |
| 8724 | |
| 8725 <table class=hotspotstable> | |
| 8726 <tr> | |
| 8727 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8728 </tr> | |
| 8729 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8730 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8731 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8732 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8733 <td>0/9 (0%)</td> |
| 32 | 8734 <td>Plus/Plus</td> |
| 8735 </tr> | |
| 8736 </table> | |
| 8737 | |
| 8738 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8739 ||||||||| | |
| 8740 Subject 6 CCGTCGTGA 14</pre> | |
| 8741 </div> | |
| 8742 | |
| 8743 </div> | |
| 8744 | |
| 59 | 8745 <div class=alignment id=hit1-53> |
| 8746 | |
| 8747 <div class=linkheader> | |
| 8748 <div class=right><a href="#description1-53">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8749 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_D?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8750 </div> |
| 8751 | |
| 8752 <div class=title> | |
| 8753 <p class=hittitle>Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</p> | |
| 8754 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8755 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_D?report=genbank&log$=nuclalign">gi|296278444|pdb|3KO2|D</a> |
| 32 | 8756 <span class=b>Length:</span> 24 |
| 8757 <span class=b>Number of Matches:</span> 1 | |
| 8758 </p> | |
| 8759 </div> | |
| 8760 | |
| 8761 | |
| 59 | 8762 <div class=hotspot id=hotspot1-53-1> |
| 32 | 8763 <p class=range> |
| 8764 <span class=range>Range 1: 19 to 11</span> | |
| 8765 </p> | |
| 8766 | |
| 8767 <table class=hotspotstable> | |
| 8768 <tr> | |
| 8769 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8770 </tr> | |
| 8771 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8772 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8773 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8774 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8775 <td>0/9 (0%)</td> |
| 32 | 8776 <td>Plus/Minus</td> |
| 8777 </tr> | |
| 8778 </table> | |
| 8779 | |
| 8780 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8781 ||||||||| | |
| 69 | 8782 Subject 19 CCGTCGTGA 11</pre> |
| 32 | 8783 </div> |
| 8784 | |
| 8785 </div> | |
| 8786 | |
| 59 | 8787 <div class=alignment id=hit1-54> |
| 8788 | |
| 8789 <div class=linkheader> | |
| 8790 <div class=right><a href="#description1-54">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8791 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_C?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8792 </div> |
| 8793 | |
| 8794 <div class=title> | |
| 8795 <p class=hittitle>Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</p> | |
| 8796 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8797 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3KO2_C?report=genbank&log$=nuclalign">gi|296278443|pdb|3KO2|C</a> |
| 32 | 8798 <span class=b>Length:</span> 24 |
| 8799 <span class=b>Number of Matches:</span> 1 | |
| 8800 </p> | |
| 8801 </div> | |
| 8802 | |
| 8803 | |
| 59 | 8804 <div class=hotspot id=hotspot1-54-1> |
| 32 | 8805 <p class=range> |
| 8806 <span class=range>Range 1: 6 to 14</span> | |
| 8807 </p> | |
| 8808 | |
| 8809 <table class=hotspotstable> | |
| 8810 <tr> | |
| 8811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8812 </tr> | |
| 8813 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8814 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8815 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8816 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8817 <td>0/9 (0%)</td> |
| 32 | 8818 <td>Plus/Plus</td> |
| 8819 </tr> | |
| 8820 </table> | |
| 8821 | |
| 8822 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8823 ||||||||| | |
| 8824 Subject 6 CCGTCGTGA 14</pre> | |
| 8825 </div> | |
| 8826 | |
| 8827 </div> | |
| 8828 | |
| 59 | 8829 <div class=alignment id=hit1-55> |
| 8830 | |
| 8831 <div class=linkheader> | |
| 8832 <div class=right><a href="#description1-55">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8833 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3I56_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8834 </div> |
| 8835 | |
| 8836 <div class=title> | |
| 8837 <p class=hittitle>Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit</p> | |
| 8838 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8839 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3I56_0?report=genbank&log$=nuclalign">gi|290790096|pdb|3I56|0</a> |
| 32 | 8840 <span class=b>Length:</span> 2923 |
| 8841 <span class=b>Number of Matches:</span> 3 | |
| 8842 </p> | |
| 8843 </div> | |
| 8844 | |
| 8845 | |
| 59 | 8846 <div class=hotspot id=hotspot1-55-1> |
| 32 | 8847 <p class=range> |
| 8848 <span class=range>Range 1: 305 to 297</span> | |
| 8849 </p> | |
| 8850 | |
| 8851 <table class=hotspotstable> | |
| 8852 <tr> | |
| 8853 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8854 </tr> | |
| 8855 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8856 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8857 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8858 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8859 <td>0/9 (0%)</td> |
| 32 | 8860 <td>Plus/Minus</td> |
| 8861 </tr> | |
| 8862 </table> | |
| 8863 | |
| 8864 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 8865 ||||||||| | |
| 69 | 8866 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 8867 </div> |
| 59 | 8868 <div class=hotspot id=hotspot1-55-2> |
| 32 | 8869 <p class=range> |
| 8870 <span class=range>Range 2: 2625 to 2633</span> | |
| 8871 </p> | |
| 8872 | |
| 8873 <table class=hotspotstable> | |
| 8874 <tr> | |
| 8875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8876 </tr> | |
| 8877 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8878 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8879 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8880 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8881 <td>0/9 (0%)</td> |
| 32 | 8882 <td>Plus/Plus</td> |
| 8883 </tr> | |
| 8884 </table> | |
| 8885 | |
| 8886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8887 ||||||||| | |
| 8888 Subject 2625 CCGTCGTGA 2633</pre> | |
| 8889 </div> | |
| 59 | 8890 <div class=hotspot id=hotspot1-55-3> |
| 32 | 8891 <p class=range> |
| 8892 <span class=range>Range 3: 2606 to 2612</span> | |
| 8893 </p> | |
| 8894 | |
| 8895 <table class=hotspotstable> | |
| 8896 <tr> | |
| 8897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8898 </tr> | |
| 8899 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8900 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8901 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8902 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8903 <td>0/7 (0%)</td> |
| 32 | 8904 <td>Plus/Plus</td> |
| 8905 </tr> | |
| 8906 </table> | |
| 8907 | |
| 8908 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 8909 ||||||| | |
| 8910 Subject 2606 GTCGTGA 2612</pre> | |
| 8911 </div> | |
| 8912 | |
| 8913 </div> | |
| 8914 | |
| 59 | 8915 <div class=alignment id=hit1-56> |
| 8916 | |
| 8917 <div class=linkheader> | |
| 8918 <div class=right><a href="#description1-56">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8919 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYX_5?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 8920 </div> |
| 8921 | |
| 8922 <div class=title> | |
| 8923 <p class=hittitle>Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution</p> | |
| 8924 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8925 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYX_5?report=genbank&log$=nuclalign">gi|281500859|pdb|3JYX|5</a> |
| 32 | 8926 <span class=b>Length:</span> 3170 |
| 8927 <span class=b>Number of Matches:</span> 5 | |
| 8928 </p> | |
| 8929 </div> | |
| 8930 | |
| 8931 | |
| 59 | 8932 <div class=hotspot id=hotspot1-56-1> |
| 32 | 8933 <p class=range> |
| 8934 <span class=range>Range 1: 2740 to 2748</span> | |
| 8935 </p> | |
| 8936 | |
| 8937 <table class=hotspotstable> | |
| 8938 <tr> | |
| 8939 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8940 </tr> | |
| 8941 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8942 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8943 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8944 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8945 <td>0/9 (0%)</td> |
| 32 | 8946 <td>Plus/Plus</td> |
| 8947 </tr> | |
| 8948 </table> | |
| 8949 | |
| 8950 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 8951 ||||||||| | |
| 8952 Subject 2740 CCGTCGTGA 2748</pre> | |
| 8953 </div> | |
| 59 | 8954 <div class=hotspot id=hotspot1-56-2> |
| 32 | 8955 <p class=range> |
| 8956 <span class=range>Range 2: 1587 to 1580</span> | |
| 8957 </p> | |
| 8958 | |
| 8959 <table class=hotspotstable> | |
| 8960 <tr> | |
| 8961 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8962 </tr> | |
| 8963 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8964 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8965 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8966 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8967 <td>0/8 (0%)</td> |
| 32 | 8968 <td>Plus/Minus</td> |
| 8969 </tr> | |
| 8970 </table> | |
| 8971 | |
| 8972 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 8973 |||||||| | |
| 69 | 8974 Subject 1587 CGTGAAGA 1580</pre> |
| 32 | 8975 </div> |
| 59 | 8976 <div class=hotspot id=hotspot1-56-3> |
| 32 | 8977 <p class=range> |
| 8978 <span class=range>Range 3: 2222 to 2229</span> | |
| 8979 </p> | |
| 8980 | |
| 8981 <table class=hotspotstable> | |
| 8982 <tr> | |
| 8983 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 8984 </tr> | |
| 8985 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8986 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8987 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8988 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
8989 <td>0/8 (0%)</td> |
| 32 | 8990 <td>Plus/Plus</td> |
| 8991 </tr> | |
| 8992 </table> | |
| 8993 | |
| 8994 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 8995 |||||||| | |
| 8996 Subject 2222 GTGAAGAG 2229</pre> | |
| 8997 </div> | |
| 59 | 8998 <div class=hotspot id=hotspot1-56-4> |
| 32 | 8999 <p class=range> |
| 9000 <span class=range>Range 4: 1344 to 1350</span> | |
| 9001 </p> | |
| 9002 | |
| 9003 <table class=hotspotstable> | |
| 9004 <tr> | |
| 9005 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9006 </tr> | |
| 9007 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9008 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9009 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9010 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9011 <td>0/7 (0%)</td> |
| 32 | 9012 <td>Plus/Plus</td> |
| 9013 </tr> | |
| 9014 </table> | |
| 9015 | |
| 9016 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9017 ||||||| | |
| 9018 Subject 1344 GTCGTGA 1350</pre> | |
| 9019 </div> | |
| 59 | 9020 <div class=hotspot id=hotspot1-56-5> |
| 32 | 9021 <p class=range> |
| 9022 <span class=range>Range 5: 2003 to 2009</span> | |
| 9023 </p> | |
| 9024 | |
| 9025 <table class=hotspotstable> | |
| 9026 <tr> | |
| 9027 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9028 </tr> | |
| 9029 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9030 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9031 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9032 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9033 <td>0/7 (0%)</td> |
| 32 | 9034 <td>Plus/Plus</td> |
| 9035 </tr> | |
| 9036 </table> | |
| 9037 | |
| 9038 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 9039 ||||||| | |
| 9040 Subject 2003 GTGAAGA 2009</pre> | |
| 9041 </div> | |
| 9042 | |
| 9043 </div> | |
| 9044 | |
| 59 | 9045 <div class=alignment id=hit1-57> |
| 9046 | |
| 9047 <div class=linkheader> | |
| 9048 <div class=right><a href="#description1-57">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9049 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYV_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9050 </div> |
| 9051 | |
| 9052 <div class=title> | |
| 9053 <p class=hittitle>Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution</p> | |
| 9054 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9055 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3JYV_A?report=genbank&log$=nuclalign">gi|281500807|pdb|3JYV|A</a> |
| 32 | 9056 <span class=b>Length:</span> 1761 |
| 9057 <span class=b>Number of Matches:</span> 3 | |
| 9058 </p> | |
| 9059 </div> | |
| 9060 | |
| 9061 | |
| 59 | 9062 <div class=hotspot id=hotspot1-57-1> |
| 32 | 9063 <p class=range> |
| 9064 <span class=range>Range 1: 1492 to 1500</span> | |
| 9065 </p> | |
| 9066 | |
| 9067 <table class=hotspotstable> | |
| 9068 <tr> | |
| 9069 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9070 </tr> | |
| 9071 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9072 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9073 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9074 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9075 <td>0/9 (0%)</td> |
| 32 | 9076 <td>Plus/Plus</td> |
| 9077 </tr> | |
| 9078 </table> | |
| 9079 | |
| 9080 <pre class=alignmentgraphic>Query 3 TCCGTCGTG 11 | |
| 9081 ||||||||| | |
| 9082 Subject 1492 TCCGTCGTG 1500</pre> | |
| 9083 </div> | |
| 59 | 9084 <div class=hotspot id=hotspot1-57-2> |
| 32 | 9085 <p class=range> |
| 9086 <span class=range>Range 2: 981 to 987</span> | |
| 9087 </p> | |
| 9088 | |
| 9089 <table class=hotspotstable> | |
| 9090 <tr> | |
| 9091 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9092 </tr> | |
| 9093 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9094 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9095 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9096 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9097 <td>0/7 (0%)</td> |
| 32 | 9098 <td>Plus/Plus</td> |
| 9099 </tr> | |
| 9100 </table> | |
| 9101 | |
| 9102 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 9103 ||||||| | |
| 9104 Subject 981 CCGTCGT 987</pre> | |
| 9105 </div> | |
| 59 | 9106 <div class=hotspot id=hotspot1-57-3> |
| 32 | 9107 <p class=range> |
| 9108 <span class=range>Range 3: 1533 to 1527</span> | |
| 9109 </p> | |
| 9110 | |
| 9111 <table class=hotspotstable> | |
| 9112 <tr> | |
| 9113 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9114 </tr> | |
| 9115 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9116 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9117 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9118 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9119 <td>0/7 (0%)</td> |
| 32 | 9120 <td>Plus/Minus</td> |
| 9121 </tr> | |
| 9122 </table> | |
| 9123 | |
| 9124 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 9125 ||||||| | |
| 69 | 9126 Subject 1533 TGAAGAG 1527</pre> |
| 32 | 9127 </div> |
| 9128 | |
| 9129 </div> | |
| 9130 | |
| 59 | 9131 <div class=alignment id=hit1-58> |
| 9132 | |
| 9133 <div class=linkheader> | |
| 9134 <div class=right><a href="#description1-58">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9135 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S1I_3?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9136 </div> |
| 9137 | |
| 9138 <div class=title> | |
| 9139 <p class=hittitle>Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h.</p> | |
| 9140 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9141 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S1I_3?report=genbank&log$=nuclalign">gi|259090425|pdb|1S1I|3</a> |
| 32 | 9142 <span class=b>Length:</span> 2999 |
| 9143 <span class=b>Number of Matches:</span> 2 | |
| 9144 </p> | |
| 9145 </div> | |
| 9146 | |
| 9147 | |
| 59 | 9148 <div class=hotspot id=hotspot1-58-1> |
| 32 | 9149 <p class=range> |
| 9150 <span class=range>Range 1: 2710 to 2718</span> | |
| 9151 </p> | |
| 9152 | |
| 9153 <table class=hotspotstable> | |
| 9154 <tr> | |
| 9155 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9156 </tr> | |
| 9157 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9158 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9159 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9160 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9161 <td>0/9 (0%)</td> |
| 32 | 9162 <td>Plus/Plus</td> |
| 9163 </tr> | |
| 9164 </table> | |
| 9165 | |
| 9166 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9167 ||||||||| | |
| 9168 Subject 2710 CCGTCGTGA 2718</pre> | |
| 9169 </div> | |
| 59 | 9170 <div class=hotspot id=hotspot1-58-2> |
| 32 | 9171 <p class=range> |
| 9172 <span class=range>Range 2: 2691 to 2697</span> | |
| 9173 </p> | |
| 9174 | |
| 9175 <table class=hotspotstable> | |
| 9176 <tr> | |
| 9177 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9178 </tr> | |
| 9179 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9180 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9181 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9182 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9183 <td>0/7 (0%)</td> |
| 32 | 9184 <td>Plus/Plus</td> |
| 9185 </tr> | |
| 9186 </table> | |
| 9187 | |
| 9188 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9189 ||||||| | |
| 9190 Subject 2691 GTCGTGA 2697</pre> | |
| 9191 </div> | |
| 9192 | |
| 9193 </div> | |
| 9194 | |
| 59 | 9195 <div class=alignment id=hit1-59> |
| 9196 | |
| 9197 <div class=linkheader> | |
| 9198 <div class=right><a href="#description1-59">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9199 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QEX_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9200 </div> |
| 9201 | |
| 9202 <div class=title> | |
| 9203 <p class=hittitle>Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit</p> | |
| 9204 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9205 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QEX_0?report=genbank&log$=nuclalign">gi|208435493|pdb|2QEX|0</a> |
| 32 | 9206 <span class=b>Length:</span> 2772 |
| 9207 <span class=b>Number of Matches:</span> 2 | |
| 9208 </p> | |
| 9209 </div> | |
| 9210 | |
| 9211 | |
| 59 | 9212 <div class=hotspot id=hotspot1-59-1> |
| 32 | 9213 <p class=range> |
| 9214 <span class=range>Range 1: 2476 to 2484</span> | |
| 9215 </p> | |
| 9216 | |
| 9217 <table class=hotspotstable> | |
| 9218 <tr> | |
| 9219 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9220 </tr> | |
| 9221 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9222 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9223 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9224 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9225 <td>0/9 (0%)</td> |
| 32 | 9226 <td>Plus/Plus</td> |
| 9227 </tr> | |
| 9228 </table> | |
| 9229 | |
| 9230 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9231 ||||||||| | |
| 9232 Subject 2476 CCGTCGTGA 2484</pre> | |
| 9233 </div> | |
| 59 | 9234 <div class=hotspot id=hotspot1-59-2> |
| 32 | 9235 <p class=range> |
| 9236 <span class=range>Range 2: 2457 to 2463</span> | |
| 9237 </p> | |
| 9238 | |
| 9239 <table class=hotspotstable> | |
| 9240 <tr> | |
| 9241 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9242 </tr> | |
| 9243 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9244 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9245 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9246 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9247 <td>0/7 (0%)</td> |
| 32 | 9248 <td>Plus/Plus</td> |
| 9249 </tr> | |
| 9250 </table> | |
| 9251 | |
| 9252 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9253 ||||||| | |
| 9254 Subject 2457 GTCGTGA 2463</pre> | |
| 9255 </div> | |
| 9256 | |
| 9257 </div> | |
| 9258 | |
| 59 | 9259 <div class=alignment id=hit1-60> |
| 9260 | |
| 9261 <div class=linkheader> | |
| 9262 <div class=right><a href="#description1-60">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9263 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CPW_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9264 </div> |
| 9265 | |
| 9266 <div class=title> | |
| 9267 <p class=hittitle>Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui</p> | |
| 9268 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9269 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CPW_0?report=genbank&log$=nuclalign">gi|194368703|pdb|3CPW|0</a> |
| 32 | 9270 <span class=b>Length:</span> 2922 |
| 9271 <span class=b>Number of Matches:</span> 2 | |
| 9272 </p> | |
| 9273 </div> | |
| 9274 | |
| 9275 | |
| 59 | 9276 <div class=hotspot id=hotspot1-60-1> |
| 32 | 9277 <p class=range> |
| 9278 <span class=range>Range 1: 2624 to 2632</span> | |
| 9279 </p> | |
| 9280 | |
| 9281 <table class=hotspotstable> | |
| 9282 <tr> | |
| 9283 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9284 </tr> | |
| 9285 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9286 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9287 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9288 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9289 <td>0/9 (0%)</td> |
| 32 | 9290 <td>Plus/Plus</td> |
| 9291 </tr> | |
| 9292 </table> | |
| 9293 | |
| 9294 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9295 ||||||||| | |
| 9296 Subject 2624 CCGTCGTGA 2632</pre> | |
| 9297 </div> | |
| 59 | 9298 <div class=hotspot id=hotspot1-60-2> |
| 32 | 9299 <p class=range> |
| 9300 <span class=range>Range 2: 2605 to 2611</span> | |
| 9301 </p> | |
| 9302 | |
| 9303 <table class=hotspotstable> | |
| 9304 <tr> | |
| 9305 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9306 </tr> | |
| 9307 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9308 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9309 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9310 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9311 <td>0/7 (0%)</td> |
| 32 | 9312 <td>Plus/Plus</td> |
| 9313 </tr> | |
| 9314 </table> | |
| 9315 | |
| 9316 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9317 ||||||| | |
| 9318 Subject 2605 GTCGTGA 2611</pre> | |
| 9319 </div> | |
| 9320 | |
| 9321 </div> | |
| 9322 | |
| 59 | 9323 <div class=alignment id=hit1-61> |
| 9324 | |
| 9325 <div class=linkheader> | |
| 9326 <div class=right><a href="#description1-61">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9327 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCV_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9328 </div> |
| 9329 | |
| 9330 <div class=title> | |
| 9331 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a </p> | |
| 9332 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9333 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCV_0?report=genbank&log$=nuclalign">gi|188596372|pdb|3CCV|0</a> |
| 32 | 9334 <span class=b>Length:</span> 2923 |
| 9335 <span class=b>Number of Matches:</span> 3 | |
| 9336 </p> | |
| 9337 </div> | |
| 9338 | |
| 59 | 9339 <a class=showmoretitles onclick="toggle_visibility('moretitles1-61'); return false;" href=''> |
| 32 | 9340 See 1 more title(s) |
| 9341 </a> | |
| 9342 | |
| 59 | 9343 <div class=moretitles id=moretitles1-61 style="display: none"> |
| 32 | 9344 <div class=title> |
| 9345 <p class=hittitle>Chain 0, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With Cc-puromycin</p> | |
| 9346 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9347 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|188596403|pdb|3CD6|0</a> |
| 32 | 9348 </p> |
| 9349 </div> | |
| 9350 </div> | |
| 9351 | |
| 59 | 9352 <div class=hotspot id=hotspot1-61-1> |
| 32 | 9353 <p class=range> |
| 9354 <span class=range>Range 1: 305 to 297</span> | |
| 9355 </p> | |
| 9356 | |
| 9357 <table class=hotspotstable> | |
| 9358 <tr> | |
| 9359 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9360 </tr> | |
| 9361 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9362 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9363 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9364 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9365 <td>0/9 (0%)</td> |
| 32 | 9366 <td>Plus/Minus</td> |
| 9367 </tr> | |
| 9368 </table> | |
| 9369 | |
| 9370 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9371 ||||||||| | |
| 69 | 9372 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9373 </div> |
| 59 | 9374 <div class=hotspot id=hotspot1-61-2> |
| 32 | 9375 <p class=range> |
| 9376 <span class=range>Range 2: 2625 to 2633</span> | |
| 9377 </p> | |
| 9378 | |
| 9379 <table class=hotspotstable> | |
| 9380 <tr> | |
| 9381 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9382 </tr> | |
| 9383 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9384 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9385 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9386 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9387 <td>0/9 (0%)</td> |
| 32 | 9388 <td>Plus/Plus</td> |
| 9389 </tr> | |
| 9390 </table> | |
| 9391 | |
| 9392 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9393 ||||||||| | |
| 9394 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9395 </div> | |
| 59 | 9396 <div class=hotspot id=hotspot1-61-3> |
| 32 | 9397 <p class=range> |
| 9398 <span class=range>Range 3: 2606 to 2612</span> | |
| 9399 </p> | |
| 9400 | |
| 9401 <table class=hotspotstable> | |
| 9402 <tr> | |
| 9403 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9404 </tr> | |
| 9405 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9406 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9407 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9408 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9409 <td>0/7 (0%)</td> |
| 32 | 9410 <td>Plus/Plus</td> |
| 9411 </tr> | |
| 9412 </table> | |
| 9413 | |
| 9414 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9415 ||||||| | |
| 9416 Subject 2606 GTCGTGA 2612</pre> | |
| 9417 </div> | |
| 9418 | |
| 9419 </div> | |
| 9420 | |
| 59 | 9421 <div class=alignment id=hit1-62> |
| 9422 | |
| 9423 <div class=linkheader> | |
| 9424 <div class=right><a href="#description1-62">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9425 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCU_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9426 </div> |
| 9427 | |
| 9428 <div class=title> | |
| 9429 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c</p> | |
| 9430 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9431 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCU_0?report=genbank&log$=nuclalign">gi|188596341|pdb|3CCU|0</a> |
| 32 | 9432 <span class=b>Length:</span> 2923 |
| 9433 <span class=b>Number of Matches:</span> 3 | |
| 9434 </p> | |
| 9435 </div> | |
| 9436 | |
| 9437 | |
| 59 | 9438 <div class=hotspot id=hotspot1-62-1> |
| 32 | 9439 <p class=range> |
| 9440 <span class=range>Range 1: 305 to 297</span> | |
| 9441 </p> | |
| 9442 | |
| 9443 <table class=hotspotstable> | |
| 9444 <tr> | |
| 9445 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9446 </tr> | |
| 9447 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9448 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9449 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9450 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9451 <td>0/9 (0%)</td> |
| 32 | 9452 <td>Plus/Minus</td> |
| 9453 </tr> | |
| 9454 </table> | |
| 9455 | |
| 9456 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9457 ||||||||| | |
| 69 | 9458 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9459 </div> |
| 59 | 9460 <div class=hotspot id=hotspot1-62-2> |
| 32 | 9461 <p class=range> |
| 9462 <span class=range>Range 2: 2625 to 2633</span> | |
| 9463 </p> | |
| 9464 | |
| 9465 <table class=hotspotstable> | |
| 9466 <tr> | |
| 9467 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9468 </tr> | |
| 9469 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9470 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9471 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9472 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9473 <td>0/9 (0%)</td> |
| 32 | 9474 <td>Plus/Plus</td> |
| 9475 </tr> | |
| 9476 </table> | |
| 9477 | |
| 9478 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9479 ||||||||| | |
| 9480 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9481 </div> | |
| 59 | 9482 <div class=hotspot id=hotspot1-62-3> |
| 32 | 9483 <p class=range> |
| 9484 <span class=range>Range 3: 2606 to 2612</span> | |
| 9485 </p> | |
| 9486 | |
| 9487 <table class=hotspotstable> | |
| 9488 <tr> | |
| 9489 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9490 </tr> | |
| 9491 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9492 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9493 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9494 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9495 <td>0/7 (0%)</td> |
| 32 | 9496 <td>Plus/Plus</td> |
| 9497 </tr> | |
| 9498 </table> | |
| 9499 | |
| 9500 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9501 ||||||| | |
| 9502 Subject 2606 GTCGTGA 2612</pre> | |
| 9503 </div> | |
| 9504 | |
| 9505 </div> | |
| 9506 | |
| 59 | 9507 <div class=alignment id=hit1-63> |
| 9508 | |
| 9509 <div class=linkheader> | |
| 9510 <div class=right><a href="#description1-63">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9511 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCS_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9512 </div> |
| 9513 | |
| 9514 <div class=title> | |
| 9515 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a</p> | |
| 9516 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9517 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCS_0?report=genbank&log$=nuclalign">gi|188596310|pdb|3CCS|0</a> |
| 32 | 9518 <span class=b>Length:</span> 2923 |
| 9519 <span class=b>Number of Matches:</span> 3 | |
| 9520 </p> | |
| 9521 </div> | |
| 9522 | |
| 9523 | |
| 59 | 9524 <div class=hotspot id=hotspot1-63-1> |
| 32 | 9525 <p class=range> |
| 9526 <span class=range>Range 1: 305 to 297</span> | |
| 9527 </p> | |
| 9528 | |
| 9529 <table class=hotspotstable> | |
| 9530 <tr> | |
| 9531 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9532 </tr> | |
| 9533 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9534 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9535 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9536 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9537 <td>0/9 (0%)</td> |
| 32 | 9538 <td>Plus/Minus</td> |
| 9539 </tr> | |
| 9540 </table> | |
| 9541 | |
| 9542 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9543 ||||||||| | |
| 69 | 9544 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9545 </div> |
| 59 | 9546 <div class=hotspot id=hotspot1-63-2> |
| 32 | 9547 <p class=range> |
| 9548 <span class=range>Range 2: 2625 to 2633</span> | |
| 9549 </p> | |
| 9550 | |
| 9551 <table class=hotspotstable> | |
| 9552 <tr> | |
| 9553 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9554 </tr> | |
| 9555 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9556 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9557 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9558 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9559 <td>0/9 (0%)</td> |
| 32 | 9560 <td>Plus/Plus</td> |
| 9561 </tr> | |
| 9562 </table> | |
| 9563 | |
| 9564 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9565 ||||||||| | |
| 9566 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9567 </div> | |
| 59 | 9568 <div class=hotspot id=hotspot1-63-3> |
| 32 | 9569 <p class=range> |
| 9570 <span class=range>Range 3: 2606 to 2612</span> | |
| 9571 </p> | |
| 9572 | |
| 9573 <table class=hotspotstable> | |
| 9574 <tr> | |
| 9575 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9576 </tr> | |
| 9577 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9578 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9579 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9580 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9581 <td>0/7 (0%)</td> |
| 32 | 9582 <td>Plus/Plus</td> |
| 9583 </tr> | |
| 9584 </table> | |
| 9585 | |
| 9586 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9587 ||||||| | |
| 9588 Subject 2606 GTCGTGA 2612</pre> | |
| 9589 </div> | |
| 9590 | |
| 9591 </div> | |
| 9592 | |
| 59 | 9593 <div class=alignment id=hit1-64> |
| 9594 | |
| 9595 <div class=linkheader> | |
| 9596 <div class=right><a href="#description1-64">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9597 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCR_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9598 </div> |
| 9599 | |
| 9600 <div class=title> | |
| 9601 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model.</p> | |
| 9602 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9603 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCR_0?report=genbank&log$=nuclalign">gi|188596279|pdb|3CCR|0</a> |
| 32 | 9604 <span class=b>Length:</span> 2923 |
| 9605 <span class=b>Number of Matches:</span> 3 | |
| 9606 </p> | |
| 9607 </div> | |
| 9608 | |
| 9609 | |
| 59 | 9610 <div class=hotspot id=hotspot1-64-1> |
| 32 | 9611 <p class=range> |
| 9612 <span class=range>Range 1: 305 to 297</span> | |
| 9613 </p> | |
| 9614 | |
| 9615 <table class=hotspotstable> | |
| 9616 <tr> | |
| 9617 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9618 </tr> | |
| 9619 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9620 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9621 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9622 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9623 <td>0/9 (0%)</td> |
| 32 | 9624 <td>Plus/Minus</td> |
| 9625 </tr> | |
| 9626 </table> | |
| 9627 | |
| 9628 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9629 ||||||||| | |
| 69 | 9630 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9631 </div> |
| 59 | 9632 <div class=hotspot id=hotspot1-64-2> |
| 32 | 9633 <p class=range> |
| 9634 <span class=range>Range 2: 2625 to 2633</span> | |
| 9635 </p> | |
| 9636 | |
| 9637 <table class=hotspotstable> | |
| 9638 <tr> | |
| 9639 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9640 </tr> | |
| 9641 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9642 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9643 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9644 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9645 <td>0/9 (0%)</td> |
| 32 | 9646 <td>Plus/Plus</td> |
| 9647 </tr> | |
| 9648 </table> | |
| 9649 | |
| 9650 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9651 ||||||||| | |
| 9652 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9653 </div> | |
| 59 | 9654 <div class=hotspot id=hotspot1-64-3> |
| 32 | 9655 <p class=range> |
| 9656 <span class=range>Range 3: 2606 to 2612</span> | |
| 9657 </p> | |
| 9658 | |
| 9659 <table class=hotspotstable> | |
| 9660 <tr> | |
| 9661 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9662 </tr> | |
| 9663 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9664 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9665 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9666 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9667 <td>0/7 (0%)</td> |
| 32 | 9668 <td>Plus/Plus</td> |
| 9669 </tr> | |
| 9670 </table> | |
| 9671 | |
| 9672 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9673 ||||||| | |
| 9674 Subject 2606 GTCGTGA 2612</pre> | |
| 9675 </div> | |
| 9676 | |
| 9677 </div> | |
| 9678 | |
| 59 | 9679 <div class=alignment id=hit1-65> |
| 9680 | |
| 9681 <div class=linkheader> | |
| 9682 <div class=right><a href="#description1-65">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9683 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCQ_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9684 </div> |
| 9685 | |
| 9686 <div class=title> | |
| 9687 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u</p> | |
| 9688 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9689 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCQ_0?report=genbank&log$=nuclalign">gi|188596248|pdb|3CCQ|0</a> |
| 32 | 9690 <span class=b>Length:</span> 2923 |
| 9691 <span class=b>Number of Matches:</span> 3 | |
| 9692 </p> | |
| 9693 </div> | |
| 9694 | |
| 9695 | |
| 59 | 9696 <div class=hotspot id=hotspot1-65-1> |
| 32 | 9697 <p class=range> |
| 9698 <span class=range>Range 1: 305 to 297</span> | |
| 9699 </p> | |
| 9700 | |
| 9701 <table class=hotspotstable> | |
| 9702 <tr> | |
| 9703 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9704 </tr> | |
| 9705 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9706 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9707 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9708 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9709 <td>0/9 (0%)</td> |
| 32 | 9710 <td>Plus/Minus</td> |
| 9711 </tr> | |
| 9712 </table> | |
| 9713 | |
| 9714 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9715 ||||||||| | |
| 69 | 9716 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9717 </div> |
| 59 | 9718 <div class=hotspot id=hotspot1-65-2> |
| 32 | 9719 <p class=range> |
| 9720 <span class=range>Range 2: 2625 to 2633</span> | |
| 9721 </p> | |
| 9722 | |
| 9723 <table class=hotspotstable> | |
| 9724 <tr> | |
| 9725 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9726 </tr> | |
| 9727 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9728 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9729 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9730 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9731 <td>0/9 (0%)</td> |
| 32 | 9732 <td>Plus/Plus</td> |
| 9733 </tr> | |
| 9734 </table> | |
| 9735 | |
| 9736 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9737 ||||||||| | |
| 9738 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9739 </div> | |
| 59 | 9740 <div class=hotspot id=hotspot1-65-3> |
| 32 | 9741 <p class=range> |
| 9742 <span class=range>Range 3: 2606 to 2612</span> | |
| 9743 </p> | |
| 9744 | |
| 9745 <table class=hotspotstable> | |
| 9746 <tr> | |
| 9747 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9748 </tr> | |
| 9749 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9750 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9751 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9752 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9753 <td>0/7 (0%)</td> |
| 32 | 9754 <td>Plus/Plus</td> |
| 9755 </tr> | |
| 9756 </table> | |
| 9757 | |
| 9758 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9759 ||||||| | |
| 9760 Subject 2606 GTCGTGA 2612</pre> | |
| 9761 </div> | |
| 9762 | |
| 9763 </div> | |
| 9764 | |
| 59 | 9765 <div class=alignment id=hit1-66> |
| 9766 | |
| 9767 <div class=linkheader> | |
| 9768 <div class=right><a href="#description1-66">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9769 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCM_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9770 </div> |
| 9771 | |
| 9772 <div class=title> | |
| 9773 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u</p> | |
| 9774 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9775 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCM_0?report=genbank&log$=nuclalign">gi|188596217|pdb|3CCM|0</a> |
| 32 | 9776 <span class=b>Length:</span> 2923 |
| 9777 <span class=b>Number of Matches:</span> 2 | |
| 9778 </p> | |
| 9779 </div> | |
| 9780 | |
| 9781 | |
| 59 | 9782 <div class=hotspot id=hotspot1-66-1> |
| 32 | 9783 <p class=range> |
| 9784 <span class=range>Range 1: 305 to 297</span> | |
| 9785 </p> | |
| 9786 | |
| 9787 <table class=hotspotstable> | |
| 9788 <tr> | |
| 9789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9790 </tr> | |
| 9791 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9792 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9793 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9794 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9795 <td>0/9 (0%)</td> |
| 32 | 9796 <td>Plus/Minus</td> |
| 9797 </tr> | |
| 9798 </table> | |
| 9799 | |
| 9800 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9801 ||||||||| | |
| 69 | 9802 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9803 </div> |
| 59 | 9804 <div class=hotspot id=hotspot1-66-2> |
| 32 | 9805 <p class=range> |
| 9806 <span class=range>Range 2: 2625 to 2633</span> | |
| 9807 </p> | |
| 9808 | |
| 9809 <table class=hotspotstable> | |
| 9810 <tr> | |
| 9811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9812 </tr> | |
| 9813 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9814 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9815 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9816 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9817 <td>0/9 (0%)</td> |
| 32 | 9818 <td>Plus/Plus</td> |
| 9819 </tr> | |
| 9820 </table> | |
| 9821 | |
| 9822 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9823 ||||||||| | |
| 9824 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9825 </div> | |
| 9826 | |
| 9827 </div> | |
| 9828 | |
| 59 | 9829 <div class=alignment id=hit1-67> |
| 9830 | |
| 9831 <div class=linkheader> | |
| 9832 <div class=right><a href="#description1-67">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9833 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCL_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9834 </div> |
| 9835 | |
| 9836 <div class=title> | |
| 9837 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model.</p> | |
| 9838 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9839 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCL_0?report=genbank&log$=nuclalign">gi|188596186|pdb|3CCL|0</a> |
| 32 | 9840 <span class=b>Length:</span> 2923 |
| 9841 <span class=b>Number of Matches:</span> 3 | |
| 9842 </p> | |
| 9843 </div> | |
| 9844 | |
| 9845 | |
| 59 | 9846 <div class=hotspot id=hotspot1-67-1> |
| 32 | 9847 <p class=range> |
| 9848 <span class=range>Range 1: 305 to 297</span> | |
| 9849 </p> | |
| 9850 | |
| 9851 <table class=hotspotstable> | |
| 9852 <tr> | |
| 9853 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9854 </tr> | |
| 9855 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9856 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9857 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9858 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9859 <td>0/9 (0%)</td> |
| 32 | 9860 <td>Plus/Minus</td> |
| 9861 </tr> | |
| 9862 </table> | |
| 9863 | |
| 9864 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9865 ||||||||| | |
| 69 | 9866 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9867 </div> |
| 59 | 9868 <div class=hotspot id=hotspot1-67-2> |
| 32 | 9869 <p class=range> |
| 9870 <span class=range>Range 2: 2625 to 2633</span> | |
| 9871 </p> | |
| 9872 | |
| 9873 <table class=hotspotstable> | |
| 9874 <tr> | |
| 9875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9876 </tr> | |
| 9877 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9878 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9879 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9880 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9881 <td>0/9 (0%)</td> |
| 32 | 9882 <td>Plus/Plus</td> |
| 9883 </tr> | |
| 9884 </table> | |
| 9885 | |
| 9886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9887 ||||||||| | |
| 9888 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9889 </div> | |
| 59 | 9890 <div class=hotspot id=hotspot1-67-3> |
| 32 | 9891 <p class=range> |
| 9892 <span class=range>Range 3: 2606 to 2612</span> | |
| 9893 </p> | |
| 9894 | |
| 9895 <table class=hotspotstable> | |
| 9896 <tr> | |
| 9897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9898 </tr> | |
| 9899 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9900 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9901 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9902 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9903 <td>0/7 (0%)</td> |
| 32 | 9904 <td>Plus/Plus</td> |
| 9905 </tr> | |
| 9906 </table> | |
| 9907 | |
| 9908 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9909 ||||||| | |
| 9910 Subject 2606 GTCGTGA 2612</pre> | |
| 9911 </div> | |
| 9912 | |
| 9913 </div> | |
| 9914 | |
| 59 | 9915 <div class=alignment id=hit1-68> |
| 9916 | |
| 9917 <div class=linkheader> | |
| 9918 <div class=right><a href="#description1-68">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9919 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCJ_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 9920 </div> |
| 9921 | |
| 9922 <div class=title> | |
| 9923 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u</p> | |
| 9924 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9925 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCJ_0?report=genbank&log$=nuclalign">gi|188596155|pdb|3CCJ|0</a> |
| 32 | 9926 <span class=b>Length:</span> 2923 |
| 9927 <span class=b>Number of Matches:</span> 3 | |
| 9928 </p> | |
| 9929 </div> | |
| 9930 | |
| 9931 | |
| 59 | 9932 <div class=hotspot id=hotspot1-68-1> |
| 32 | 9933 <p class=range> |
| 9934 <span class=range>Range 1: 305 to 297</span> | |
| 9935 </p> | |
| 9936 | |
| 9937 <table class=hotspotstable> | |
| 9938 <tr> | |
| 9939 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9940 </tr> | |
| 9941 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9942 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9943 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9944 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9945 <td>0/9 (0%)</td> |
| 32 | 9946 <td>Plus/Minus</td> |
| 9947 </tr> | |
| 9948 </table> | |
| 9949 | |
| 9950 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 9951 ||||||||| | |
| 69 | 9952 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 9953 </div> |
| 59 | 9954 <div class=hotspot id=hotspot1-68-2> |
| 32 | 9955 <p class=range> |
| 9956 <span class=range>Range 2: 2625 to 2633</span> | |
| 9957 </p> | |
| 9958 | |
| 9959 <table class=hotspotstable> | |
| 9960 <tr> | |
| 9961 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9962 </tr> | |
| 9963 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9964 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9965 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9966 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9967 <td>0/9 (0%)</td> |
| 32 | 9968 <td>Plus/Plus</td> |
| 9969 </tr> | |
| 9970 </table> | |
| 9971 | |
| 9972 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 9973 ||||||||| | |
| 9974 Subject 2625 CCGTCGTGA 2633</pre> | |
| 9975 </div> | |
| 59 | 9976 <div class=hotspot id=hotspot1-68-3> |
| 32 | 9977 <p class=range> |
| 9978 <span class=range>Range 3: 2606 to 2612</span> | |
| 9979 </p> | |
| 9980 | |
| 9981 <table class=hotspotstable> | |
| 9982 <tr> | |
| 9983 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 9984 </tr> | |
| 9985 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9986 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9987 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9988 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
9989 <td>0/7 (0%)</td> |
| 32 | 9990 <td>Plus/Plus</td> |
| 9991 </tr> | |
| 9992 </table> | |
| 9993 | |
| 9994 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 9995 ||||||| | |
| 9996 Subject 2606 GTCGTGA 2612</pre> | |
| 9997 </div> | |
| 9998 | |
| 9999 </div> | |
| 10000 | |
| 59 | 10001 <div class=alignment id=hit1-69> |
| 10002 | |
| 10003 <div class=linkheader> | |
| 10004 <div class=right><a href="#description1-69">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10005 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCE_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10006 </div> |
| 10007 | |
| 10008 <div class=title> | |
| 10009 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a</p> | |
| 10010 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10011 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CCE_0?report=genbank&log$=nuclalign">gi|188596124|pdb|3CCE|0</a> |
| 32 | 10012 <span class=b>Length:</span> 2923 |
| 10013 <span class=b>Number of Matches:</span> 3 | |
| 10014 </p> | |
| 10015 </div> | |
| 10016 | |
| 10017 | |
| 59 | 10018 <div class=hotspot id=hotspot1-69-1> |
| 32 | 10019 <p class=range> |
| 10020 <span class=range>Range 1: 305 to 297</span> | |
| 10021 </p> | |
| 10022 | |
| 10023 <table class=hotspotstable> | |
| 10024 <tr> | |
| 10025 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10026 </tr> | |
| 10027 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10028 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10029 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10030 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10031 <td>0/9 (0%)</td> |
| 32 | 10032 <td>Plus/Minus</td> |
| 10033 </tr> | |
| 10034 </table> | |
| 10035 | |
| 10036 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10037 ||||||||| | |
| 69 | 10038 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10039 </div> |
| 59 | 10040 <div class=hotspot id=hotspot1-69-2> |
| 32 | 10041 <p class=range> |
| 10042 <span class=range>Range 2: 2625 to 2633</span> | |
| 10043 </p> | |
| 10044 | |
| 10045 <table class=hotspotstable> | |
| 10046 <tr> | |
| 10047 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10048 </tr> | |
| 10049 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10050 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10051 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10052 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10053 <td>0/9 (0%)</td> |
| 32 | 10054 <td>Plus/Plus</td> |
| 10055 </tr> | |
| 10056 </table> | |
| 10057 | |
| 10058 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10059 ||||||||| | |
| 10060 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10061 </div> | |
| 59 | 10062 <div class=hotspot id=hotspot1-69-3> |
| 32 | 10063 <p class=range> |
| 10064 <span class=range>Range 3: 2606 to 2612</span> | |
| 10065 </p> | |
| 10066 | |
| 10067 <table class=hotspotstable> | |
| 10068 <tr> | |
| 10069 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10070 </tr> | |
| 10071 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10072 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10073 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10074 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10075 <td>0/7 (0%)</td> |
| 32 | 10076 <td>Plus/Plus</td> |
| 10077 </tr> | |
| 10078 </table> | |
| 10079 | |
| 10080 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10081 ||||||| | |
| 10082 Subject 2606 GTCGTGA 2612</pre> | |
| 10083 </div> | |
| 10084 | |
| 10085 </div> | |
| 10086 | |
| 59 | 10087 <div class=alignment id=hit1-70> |
| 10088 | |
| 10089 <div class=linkheader> | |
| 10090 <div class=right><a href="#description1-70">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10091 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC7_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10092 </div> |
| 10093 | |
| 10094 <div class=title> | |
| 10095 <p class=hittitle>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u</p> | |
| 10096 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10097 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC7_0?report=genbank&log$=nuclalign">gi|188596093|pdb|3CC7|0</a> |
| 32 | 10098 <span class=b>Length:</span> 2923 |
| 10099 <span class=b>Number of Matches:</span> 3 | |
| 10100 </p> | |
| 10101 </div> | |
| 10102 | |
| 10103 | |
| 59 | 10104 <div class=hotspot id=hotspot1-70-1> |
| 32 | 10105 <p class=range> |
| 10106 <span class=range>Range 1: 305 to 297</span> | |
| 10107 </p> | |
| 10108 | |
| 10109 <table class=hotspotstable> | |
| 10110 <tr> | |
| 10111 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10112 </tr> | |
| 10113 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10114 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10115 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10116 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10117 <td>0/9 (0%)</td> |
| 32 | 10118 <td>Plus/Minus</td> |
| 10119 </tr> | |
| 10120 </table> | |
| 10121 | |
| 10122 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10123 ||||||||| | |
| 69 | 10124 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10125 </div> |
| 59 | 10126 <div class=hotspot id=hotspot1-70-2> |
| 32 | 10127 <p class=range> |
| 10128 <span class=range>Range 2: 2625 to 2633</span> | |
| 10129 </p> | |
| 10130 | |
| 10131 <table class=hotspotstable> | |
| 10132 <tr> | |
| 10133 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10134 </tr> | |
| 10135 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10136 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10137 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10138 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10139 <td>0/9 (0%)</td> |
| 32 | 10140 <td>Plus/Plus</td> |
| 10141 </tr> | |
| 10142 </table> | |
| 10143 | |
| 10144 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10145 ||||||||| | |
| 10146 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10147 </div> | |
| 59 | 10148 <div class=hotspot id=hotspot1-70-3> |
| 32 | 10149 <p class=range> |
| 10150 <span class=range>Range 3: 2606 to 2612</span> | |
| 10151 </p> | |
| 10152 | |
| 10153 <table class=hotspotstable> | |
| 10154 <tr> | |
| 10155 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10156 </tr> | |
| 10157 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10158 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10159 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10160 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10161 <td>0/7 (0%)</td> |
| 32 | 10162 <td>Plus/Plus</td> |
| 10163 </tr> | |
| 10164 </table> | |
| 10165 | |
| 10166 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10167 ||||||| | |
| 10168 Subject 2606 GTCGTGA 2612</pre> | |
| 10169 </div> | |
| 10170 | |
| 10171 </div> | |
| 10172 | |
| 59 | 10173 <div class=alignment id=hit1-71> |
| 10174 | |
| 10175 <div class=linkheader> | |
| 10176 <div class=right><a href="#description1-71">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10177 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC2_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10178 </div> |
| 10179 | |
| 10180 <div class=title> | |
| 10181 <p class=hittitle>Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins </p> | |
| 10182 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10183 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3CC2_0?report=genbank&log$=nuclalign">gi|188596031|pdb|3CC2|0</a> |
| 32 | 10184 <span class=b>Length:</span> 2923 |
| 10185 <span class=b>Number of Matches:</span> 3 | |
| 10186 </p> | |
| 10187 </div> | |
| 10188 | |
| 59 | 10189 <a class=showmoretitles onclick="toggle_visibility('moretitles1-71'); return false;" href=''> |
| 32 | 10190 See 7 more title(s) |
| 10191 </a> | |
| 10192 | |
| 59 | 10193 <div class=moretitles id=moretitles1-71 style="display: none"> |
| 32 | 10194 <div class=title> |
| 10195 <p class=hittitle>Chain 0, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit </p> | |
| 10196 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10197 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|188596062|pdb|3CC4|0</a> |
| 32 | 10198 </p> |
| 10199 </div> | |
| 10200 <div class=title> | |
| 10201 <p class=hittitle>Chain 0, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10202 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10203 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|206581937|pdb|3CMA|0</a> |
| 32 | 10204 </p> |
| 10205 </div> | |
| 10206 <div class=title> | |
| 10207 <p class=hittitle>Chain 0, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10208 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10209 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|206581970|pdb|3CME|0</a> |
| 32 | 10210 </p> |
| 10211 </div> | |
| 10212 <div class=title> | |
| 10213 <p class=hittitle>Chain 0, Co-Crystal Structure Of Tiamulin Bound To The Large Ribosomal Subunit </p> | |
| 10214 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10215 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|228312141|pdb|3G4S|0</a> |
| 32 | 10216 </p> |
| 10217 </div> | |
| 10218 <div class=title> | |
| 10219 <p class=hittitle>Chain 0, Co-Crystal Structure Of Homoharringtonine Bound To The Large Ribosomal Subunit </p> | |
| 10220 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10221 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|228312197|pdb|3G6E|0</a> |
| 32 | 10222 </p> |
| 10223 </div> | |
| 10224 <div class=title> | |
| 10225 <p class=hittitle>Chain 0, Co-crystal Structure Of Bruceantin Bound To The Large Ribosomal Subunit </p> | |
| 10226 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10227 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|228312233|pdb|3G71|0</a> |
| 32 | 10228 </p> |
| 10229 </div> | |
| 10230 <div class=title> | |
| 10231 <p class=hittitle>Chain 0, Co-Crystal Structure Of Mycalamide A Bound To The Large Ribosomal Subunit</p> | |
| 10232 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10233 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|290790035|pdb|3I55|0</a> |
| 32 | 10234 </p> |
| 10235 </div> | |
| 10236 </div> | |
| 10237 | |
| 59 | 10238 <div class=hotspot id=hotspot1-71-1> |
| 32 | 10239 <p class=range> |
| 10240 <span class=range>Range 1: 305 to 297</span> | |
| 10241 </p> | |
| 10242 | |
| 10243 <table class=hotspotstable> | |
| 10244 <tr> | |
| 10245 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10246 </tr> | |
| 10247 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10248 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10249 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10250 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10251 <td>0/9 (0%)</td> |
| 32 | 10252 <td>Plus/Minus</td> |
| 10253 </tr> | |
| 10254 </table> | |
| 10255 | |
| 10256 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10257 ||||||||| | |
| 69 | 10258 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10259 </div> |
| 59 | 10260 <div class=hotspot id=hotspot1-71-2> |
| 32 | 10261 <p class=range> |
| 10262 <span class=range>Range 2: 2625 to 2633</span> | |
| 10263 </p> | |
| 10264 | |
| 10265 <table class=hotspotstable> | |
| 10266 <tr> | |
| 10267 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10268 </tr> | |
| 10269 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10270 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10271 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10272 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10273 <td>0/9 (0%)</td> |
| 32 | 10274 <td>Plus/Plus</td> |
| 10275 </tr> | |
| 10276 </table> | |
| 10277 | |
| 10278 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10279 ||||||||| | |
| 10280 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10281 </div> | |
| 59 | 10282 <div class=hotspot id=hotspot1-71-3> |
| 32 | 10283 <p class=range> |
| 10284 <span class=range>Range 3: 2606 to 2612</span> | |
| 10285 </p> | |
| 10286 | |
| 10287 <table class=hotspotstable> | |
| 10288 <tr> | |
| 10289 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10290 </tr> | |
| 10291 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10292 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10293 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10294 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10295 <td>0/7 (0%)</td> |
| 32 | 10296 <td>Plus/Plus</td> |
| 10297 </tr> | |
| 10298 </table> | |
| 10299 | |
| 10300 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10301 ||||||| | |
| 10302 Subject 2606 GTCGTGA 2612</pre> | |
| 10303 </div> | |
| 10304 | |
| 10305 </div> | |
| 10306 | |
| 59 | 10307 <div class=alignment id=hit1-72> |
| 10308 | |
| 10309 <div class=linkheader> | |
| 10310 <div class=right><a href="#description1-72">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10311 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2ZKR_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10312 </div> |
| 10313 | |
| 10314 <div class=title> | |
| 10315 <p class=hittitle>Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map</p> | |
| 10316 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10317 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2ZKR_0?report=genbank&log$=nuclalign">gi|187609272|pdb|2ZKR|0</a> |
| 32 | 10318 <span class=b>Length:</span> 2903 |
| 10319 <span class=b>Number of Matches:</span> 4 | |
| 10320 </p> | |
| 10321 </div> | |
| 10322 | |
| 10323 | |
| 59 | 10324 <div class=hotspot id=hotspot1-72-1> |
| 32 | 10325 <p class=range> |
| 10326 <span class=range>Range 1: 2623 to 2631</span> | |
| 10327 </p> | |
| 10328 | |
| 10329 <table class=hotspotstable> | |
| 10330 <tr> | |
| 10331 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10332 </tr> | |
| 10333 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10334 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10335 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10336 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10337 <td>0/9 (0%)</td> |
| 32 | 10338 <td>Plus/Plus</td> |
| 10339 </tr> | |
| 10340 </table> | |
| 10341 | |
| 10342 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10343 ||||||||| | |
| 10344 Subject 2623 CCGTCGTGA 2631</pre> | |
| 10345 </div> | |
| 59 | 10346 <div class=hotspot id=hotspot1-72-2> |
| 32 | 10347 <p class=range> |
| 10348 <span class=range>Range 2: 2111 to 2118</span> | |
| 10349 </p> | |
| 10350 | |
| 10351 <table class=hotspotstable> | |
| 10352 <tr> | |
| 10353 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10354 </tr> | |
| 10355 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10356 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10357 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10358 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10359 <td>0/8 (0%)</td> |
| 32 | 10360 <td>Plus/Plus</td> |
| 10361 </tr> | |
| 10362 </table> | |
| 10363 | |
| 10364 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 10365 |||||||| | |
| 10366 Subject 2111 GTGAAGAG 2118</pre> | |
| 10367 </div> | |
| 59 | 10368 <div class=hotspot id=hotspot1-72-3> |
| 32 | 10369 <p class=range> |
| 10370 <span class=range>Range 3: 353 to 359</span> | |
| 10371 </p> | |
| 10372 | |
| 10373 <table class=hotspotstable> | |
| 10374 <tr> | |
| 10375 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10376 </tr> | |
| 10377 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10378 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10379 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10380 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10381 <td>0/7 (0%)</td> |
| 32 | 10382 <td>Plus/Plus</td> |
| 10383 </tr> | |
| 10384 </table> | |
| 10385 | |
| 10386 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 10387 ||||||| | |
| 10388 Subject 353 TGAAGAG 359</pre> | |
| 10389 </div> | |
| 59 | 10390 <div class=hotspot id=hotspot1-72-4> |
| 32 | 10391 <p class=range> |
| 10392 <span class=range>Range 4: 1892 to 1898</span> | |
| 10393 </p> | |
| 10394 | |
| 10395 <table class=hotspotstable> | |
| 10396 <tr> | |
| 10397 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10398 </tr> | |
| 10399 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10400 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10401 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10402 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10403 <td>0/7 (0%)</td> |
| 32 | 10404 <td>Plus/Plus</td> |
| 10405 </tr> | |
| 10406 </table> | |
| 10407 | |
| 10408 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 10409 ||||||| | |
| 10410 Subject 1892 GTGAAGA 1898</pre> | |
| 10411 </div> | |
| 10412 | |
| 10413 </div> | |
| 10414 | |
| 59 | 10415 <div class=alignment id=hit1-73> |
| 10416 | |
| 10417 <div class=linkheader> | |
| 10418 <div class=right><a href="#description1-73">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10419 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QA4_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10420 </div> |
| 10421 | |
| 10422 <div class=title> | |
| 10423 <p class=hittitle>Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit</p> | |
| 10424 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10425 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2QA4_0?report=genbank&log$=nuclalign">gi|171848835|pdb|2QA4|0</a> |
| 32 | 10426 <span class=b>Length:</span> 2922 |
| 10427 <span class=b>Number of Matches:</span> 2 | |
| 10428 </p> | |
| 10429 </div> | |
| 10430 | |
| 10431 | |
| 59 | 10432 <div class=hotspot id=hotspot1-73-1> |
| 32 | 10433 <p class=range> |
| 10434 <span class=range>Range 1: 2624 to 2632</span> | |
| 10435 </p> | |
| 10436 | |
| 10437 <table class=hotspotstable> | |
| 10438 <tr> | |
| 10439 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10440 </tr> | |
| 10441 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10442 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10443 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10444 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10445 <td>0/9 (0%)</td> |
| 32 | 10446 <td>Plus/Plus</td> |
| 10447 </tr> | |
| 10448 </table> | |
| 10449 | |
| 10450 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10451 ||||||||| | |
| 10452 Subject 2624 CCGTCGTGA 2632</pre> | |
| 10453 </div> | |
| 59 | 10454 <div class=hotspot id=hotspot1-73-2> |
| 32 | 10455 <p class=range> |
| 10456 <span class=range>Range 2: 2605 to 2611</span> | |
| 10457 </p> | |
| 10458 | |
| 10459 <table class=hotspotstable> | |
| 10460 <tr> | |
| 10461 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10462 </tr> | |
| 10463 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10464 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10465 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10466 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10467 <td>0/7 (0%)</td> |
| 32 | 10468 <td>Plus/Plus</td> |
| 10469 </tr> | |
| 10470 </table> | |
| 10471 | |
| 10472 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10473 ||||||| | |
| 10474 Subject 2605 GTCGTGA 2611</pre> | |
| 10475 </div> | |
| 10476 | |
| 10477 </div> | |
| 10478 | |
| 59 | 10479 <div class=alignment id=hit1-74> |
| 10480 | |
| 10481 <div class=linkheader> | |
| 10482 <div class=right><a href="#description1-74">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10483 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2FTC_R?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10484 </div> |
| 10485 | |
| 10486 <div class=title> | |
| 10487 <p class=hittitle>Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome</p> | |
| 10488 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10489 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2FTC_R?report=genbank&log$=nuclalign">gi|99032306|pdb|2FTC|R</a> |
| 32 | 10490 <span class=b>Length:</span> 1568 |
| 10491 <span class=b>Number of Matches:</span> 1 | |
| 10492 </p> | |
| 10493 </div> | |
| 10494 | |
| 10495 | |
| 59 | 10496 <div class=hotspot id=hotspot1-74-1> |
| 32 | 10497 <p class=range> |
| 10498 <span class=range>Range 1: 1032 to 1040</span> | |
| 10499 </p> | |
| 10500 | |
| 10501 <table class=hotspotstable> | |
| 10502 <tr> | |
| 10503 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10504 </tr> | |
| 10505 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10506 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10507 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10508 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10509 <td>0/9 (0%)</td> |
| 32 | 10510 <td>Plus/Plus</td> |
| 10511 </tr> | |
| 10512 </table> | |
| 10513 | |
| 10514 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16 | |
| 10515 ||||||||| | |
| 10516 Subject 1032 CGTGAAGAG 1040</pre> | |
| 10517 </div> | |
| 10518 | |
| 10519 </div> | |
| 10520 | |
| 59 | 10521 <div class=alignment id=hit1-75> |
| 10522 | |
| 10523 <div class=linkheader> | |
| 10524 <div class=right><a href="#description1-75">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10525 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S72_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10526 </div> |
| 10527 | |
| 10528 <div class=title> | |
| 10529 <p class=hittitle>Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution </p> | |
| 10530 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10531 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1S72_0?report=genbank&log$=nuclalign">gi|50513468|pdb|1S72|0</a> |
| 32 | 10532 <span class=b>Length:</span> 2922 |
| 10533 <span class=b>Number of Matches:</span> 2 | |
| 10534 </p> | |
| 10535 </div> | |
| 10536 | |
| 59 | 10537 <a class=showmoretitles onclick="toggle_visibility('moretitles1-75'); return false;" href=''> |
| 32 | 10538 See 14 more title(s) |
| 10539 </a> | |
| 10540 | |
| 59 | 10541 <div class=moretitles id=moretitles1-75 style="display: none"> |
| 32 | 10542 <div class=title> |
| 10543 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "daa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10544 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10545 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753123|pdb|1VQ4|0</a> |
| 32 | 10546 </p> |
| 10547 </div> | |
| 10548 <div class=title> | |
| 10549 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "raa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10550 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10551 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753155|pdb|1VQ5|0</a> |
| 32 | 10552 </p> |
| 10553 </div> | |
| 10554 <div class=title> | |
| 10555 <p class=hittitle>Chain 0, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10556 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10557 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753187|pdb|1VQ6|0</a> |
| 32 | 10558 </p> |
| 10559 </div> | |
| 10560 <div class=title> | |
| 10561 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "dca" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10562 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10563 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753219|pdb|1VQ7|0</a> |
| 32 | 10564 </p> |
| 10565 </div> | |
| 10566 <div class=title> | |
| 10567 <p class=hittitle>Chain 0, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10568 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10569 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753251|pdb|1VQ8|0</a> |
| 32 | 10570 </p> |
| 10571 </div> | |
| 10572 <div class=title> | |
| 10573 <p class=hittitle>Chain 0, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10574 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10575 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753282|pdb|1VQ9|0</a> |
| 32 | 10576 </p> |
| 10577 </div> | |
| 10578 <div class=title> | |
| 10579 <p class=hittitle>Chain 0, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of The Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10580 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10581 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753314|pdb|1VQK|0</a> |
| 32 | 10582 </p> |
| 10583 </div> | |
| 10584 <div class=title> | |
| 10585 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "dcsn" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10586 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10587 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753345|pdb|1VQL|0</a> |
| 32 | 10588 </p> |
| 10589 </div> | |
| 10590 <div class=title> | |
| 10591 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "dan" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10592 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10593 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753376|pdb|1VQM|0</a> |
| 32 | 10594 </p> |
| 10595 </div> | |
| 10596 <div class=title> | |
| 10597 <p class=hittitle>Chain 0, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10598 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10599 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753407|pdb|1VQN|0</a> |
| 32 | 10600 </p> |
| 10601 </div> | |
| 10602 <div class=title> | |
| 10603 <p class=hittitle>Chain 0, The Structure Of Ccpmn Bound To The Large Ribosomal Subunit Haloarcula Marismortui </p> | |
| 10604 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10605 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753439|pdb|1VQO|0</a> |
| 32 | 10606 </p> |
| 10607 </div> | |
| 10608 <div class=title> | |
| 10609 <p class=hittitle>Chain 0, The Structure Of The Transition State Analogue "rap" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10610 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10611 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|83753470|pdb|1VQP|0</a> |
| 32 | 10612 </p> |
| 10613 </div> | |
| 10614 <div class=title> | |
| 10615 <p class=hittitle>Chain 0, 13-Deoxytedanolide Bound To The Large Subunit Of Haloarcula Marismortui </p> | |
| 10616 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10617 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|145580171|pdb|2OTJ|0</a> |
| 32 | 10618 </p> |
| 10619 </div> | |
| 10620 <div class=title> | |
| 10621 <p class=hittitle>Chain 0, Girodazole Bound To The Large Subunit Of Haloarcula Marismortui</p> | |
| 10622 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10623 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|145580202|pdb|2OTL|0</a> |
| 32 | 10624 </p> |
| 10625 </div> | |
| 10626 </div> | |
| 10627 | |
| 59 | 10628 <div class=hotspot id=hotspot1-75-1> |
| 32 | 10629 <p class=range> |
| 10630 <span class=range>Range 1: 2624 to 2632</span> | |
| 10631 </p> | |
| 10632 | |
| 10633 <table class=hotspotstable> | |
| 10634 <tr> | |
| 10635 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10636 </tr> | |
| 10637 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10638 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10639 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10640 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10641 <td>0/9 (0%)</td> |
| 32 | 10642 <td>Plus/Plus</td> |
| 10643 </tr> | |
| 10644 </table> | |
| 10645 | |
| 10646 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10647 ||||||||| | |
| 10648 Subject 2624 CCGTCGTGA 2632</pre> | |
| 10649 </div> | |
| 59 | 10650 <div class=hotspot id=hotspot1-75-2> |
| 32 | 10651 <p class=range> |
| 10652 <span class=range>Range 2: 2605 to 2611</span> | |
| 10653 </p> | |
| 10654 | |
| 10655 <table class=hotspotstable> | |
| 10656 <tr> | |
| 10657 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10658 </tr> | |
| 10659 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10660 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10661 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10662 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10663 <td>0/7 (0%)</td> |
| 32 | 10664 <td>Plus/Plus</td> |
| 10665 </tr> | |
| 10666 </table> | |
| 10667 | |
| 10668 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10669 ||||||| | |
| 10670 Subject 2605 GTCGTGA 2611</pre> | |
| 10671 </div> | |
| 10672 | |
| 10673 </div> | |
| 10674 | |
| 59 | 10675 <div class=alignment id=hit1-76> |
| 10676 | |
| 10677 <div class=linkheader> | |
| 10678 <div class=right><a href="#description1-76">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10679 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YIT_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10680 </div> |
| 10681 | |
| 10682 <div class=title> | |
| 10683 <p class=hittitle>Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10684 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10685 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YIT_0?report=genbank&log$=nuclalign">gi|66360881|pdb|1YIT|0</a> |
| 32 | 10686 <span class=b>Length:</span> 2922 |
| 10687 <span class=b>Number of Matches:</span> 3 | |
| 10688 </p> | |
| 10689 </div> | |
| 10690 | |
| 59 | 10691 <a class=showmoretitles onclick="toggle_visibility('moretitles1-76'); return false;" href=''> |
| 32 | 10692 See 1 more title(s) |
| 10693 </a> | |
| 10694 | |
| 59 | 10695 <div class=moretitles id=moretitles1-76 style="display: none"> |
| 32 | 10696 <div class=title> |
| 10697 <p class=hittitle>Chain 0, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui Containing A Three Residue Deletion In L22</p> | |
| 10698 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10699 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|66360914|pdb|1YJ9|0</a> |
| 32 | 10700 </p> |
| 10701 </div> | |
| 10702 </div> | |
| 10703 | |
| 59 | 10704 <div class=hotspot id=hotspot1-76-1> |
| 32 | 10705 <p class=range> |
| 10706 <span class=range>Range 1: 305 to 297</span> | |
| 10707 </p> | |
| 10708 | |
| 10709 <table class=hotspotstable> | |
| 10710 <tr> | |
| 10711 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10712 </tr> | |
| 10713 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10714 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10715 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10716 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10717 <td>0/9 (0%)</td> |
| 32 | 10718 <td>Plus/Minus</td> |
| 10719 </tr> | |
| 10720 </table> | |
| 10721 | |
| 10722 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10723 ||||||||| | |
| 69 | 10724 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10725 </div> |
| 59 | 10726 <div class=hotspot id=hotspot1-76-2> |
| 32 | 10727 <p class=range> |
| 10728 <span class=range>Range 2: 2625 to 2633</span> | |
| 10729 </p> | |
| 10730 | |
| 10731 <table class=hotspotstable> | |
| 10732 <tr> | |
| 10733 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10734 </tr> | |
| 10735 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10736 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10737 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10738 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10739 <td>0/9 (0%)</td> |
| 32 | 10740 <td>Plus/Plus</td> |
| 10741 </tr> | |
| 10742 </table> | |
| 10743 | |
| 10744 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10745 ||||||||| | |
| 10746 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10747 </div> | |
| 59 | 10748 <div class=hotspot id=hotspot1-76-3> |
| 32 | 10749 <p class=range> |
| 10750 <span class=range>Range 3: 2606 to 2612</span> | |
| 10751 </p> | |
| 10752 | |
| 10753 <table class=hotspotstable> | |
| 10754 <tr> | |
| 10755 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10756 </tr> | |
| 10757 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10758 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10759 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10760 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10761 <td>0/7 (0%)</td> |
| 32 | 10762 <td>Plus/Plus</td> |
| 10763 </tr> | |
| 10764 </table> | |
| 10765 | |
| 10766 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10767 ||||||| | |
| 10768 Subject 2606 GTCGTGA 2612</pre> | |
| 10769 </div> | |
| 10770 | |
| 10771 </div> | |
| 10772 | |
| 59 | 10773 <div class=alignment id=hit1-77> |
| 10774 | |
| 10775 <div class=linkheader> | |
| 10776 <div class=right><a href="#description1-77">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10777 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YHQ_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10778 </div> |
| 10779 | |
| 10780 <div class=title> | |
| 10781 <p class=hittitle>Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10782 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10783 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YHQ_0?report=genbank&log$=nuclalign">gi|66360782|pdb|1YHQ|0</a> |
| 32 | 10784 <span class=b>Length:</span> 2922 |
| 10785 <span class=b>Number of Matches:</span> 3 | |
| 10786 </p> | |
| 10787 </div> | |
| 10788 | |
| 59 | 10789 <a class=showmoretitles onclick="toggle_visibility('moretitles1-77'); return false;" href=''> |
| 32 | 10790 See 3 more title(s) |
| 10791 </a> | |
| 10792 | |
| 59 | 10793 <div class=moretitles id=moretitles1-77 style="display: none"> |
| 32 | 10794 <div class=title> |
| 10795 <p class=hittitle>Chain 0, Crystal Structure Of Erythromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10796 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10797 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|66360815|pdb|1YI2|0</a> |
| 32 | 10798 </p> |
| 10799 </div> | |
| 10800 <div class=title> | |
| 10801 <p class=hittitle>Chain 0, Crystal Structure Of Telithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 10802 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10803 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|66360848|pdb|1YIJ|0</a> |
| 32 | 10804 </p> |
| 10805 </div> | |
| 10806 <div class=title> | |
| 10807 <p class=hittitle>Chain 0, Crystal Structure Of Clindamycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui</p> | |
| 10808 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10809 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|66360947|pdb|1YJN|0</a> |
| 32 | 10810 </p> |
| 10811 </div> | |
| 10812 </div> | |
| 10813 | |
| 59 | 10814 <div class=hotspot id=hotspot1-77-1> |
| 32 | 10815 <p class=range> |
| 10816 <span class=range>Range 1: 305 to 297</span> | |
| 10817 </p> | |
| 10818 | |
| 10819 <table class=hotspotstable> | |
| 10820 <tr> | |
| 10821 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10822 </tr> | |
| 10823 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10824 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10825 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10826 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10827 <td>0/9 (0%)</td> |
| 32 | 10828 <td>Plus/Minus</td> |
| 10829 </tr> | |
| 10830 </table> | |
| 10831 | |
| 10832 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10833 ||||||||| | |
| 69 | 10834 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10835 </div> |
| 59 | 10836 <div class=hotspot id=hotspot1-77-2> |
| 32 | 10837 <p class=range> |
| 10838 <span class=range>Range 2: 2625 to 2633</span> | |
| 10839 </p> | |
| 10840 | |
| 10841 <table class=hotspotstable> | |
| 10842 <tr> | |
| 10843 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10844 </tr> | |
| 10845 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10846 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10847 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10848 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10849 <td>0/9 (0%)</td> |
| 32 | 10850 <td>Plus/Plus</td> |
| 10851 </tr> | |
| 10852 </table> | |
| 10853 | |
| 10854 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10855 ||||||||| | |
| 10856 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10857 </div> | |
| 59 | 10858 <div class=hotspot id=hotspot1-77-3> |
| 32 | 10859 <p class=range> |
| 10860 <span class=range>Range 3: 2606 to 2612</span> | |
| 10861 </p> | |
| 10862 | |
| 10863 <table class=hotspotstable> | |
| 10864 <tr> | |
| 10865 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10866 </tr> | |
| 10867 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10868 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10869 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10870 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10871 <td>0/7 (0%)</td> |
| 32 | 10872 <td>Plus/Plus</td> |
| 10873 </tr> | |
| 10874 </table> | |
| 10875 | |
| 10876 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10877 ||||||| | |
| 10878 Subject 2606 GTCGTGA 2612</pre> | |
| 10879 </div> | |
| 10880 | |
| 10881 </div> | |
| 10882 | |
| 59 | 10883 <div class=alignment id=hit1-78> |
| 10884 | |
| 10885 <div class=linkheader> | |
| 10886 <div class=right><a href="#description1-78">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10887 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YJW_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10888 </div> |
| 10889 | |
| 10890 <div class=title> | |
| 10891 <p class=hittitle>Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui</p> | |
| 10892 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10893 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1YJW_0?report=genbank&log$=nuclalign">gi|66360980|pdb|1YJW|0</a> |
| 32 | 10894 <span class=b>Length:</span> 2922 |
| 10895 <span class=b>Number of Matches:</span> 3 | |
| 10896 </p> | |
| 10897 </div> | |
| 10898 | |
| 10899 | |
| 59 | 10900 <div class=hotspot id=hotspot1-78-1> |
| 32 | 10901 <p class=range> |
| 10902 <span class=range>Range 1: 305 to 297</span> | |
| 10903 </p> | |
| 10904 | |
| 10905 <table class=hotspotstable> | |
| 10906 <tr> | |
| 10907 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10908 </tr> | |
| 10909 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10910 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10911 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10912 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10913 <td>0/9 (0%)</td> |
| 32 | 10914 <td>Plus/Minus</td> |
| 10915 </tr> | |
| 10916 </table> | |
| 10917 | |
| 10918 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 10919 ||||||||| | |
| 69 | 10920 Subject 305 TCGTGAAGA 297</pre> |
| 32 | 10921 </div> |
| 59 | 10922 <div class=hotspot id=hotspot1-78-2> |
| 32 | 10923 <p class=range> |
| 10924 <span class=range>Range 2: 2625 to 2633</span> | |
| 10925 </p> | |
| 10926 | |
| 10927 <table class=hotspotstable> | |
| 10928 <tr> | |
| 10929 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10930 </tr> | |
| 10931 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10932 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10933 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10934 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10935 <td>0/9 (0%)</td> |
| 32 | 10936 <td>Plus/Plus</td> |
| 10937 </tr> | |
| 10938 </table> | |
| 10939 | |
| 10940 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 10941 ||||||||| | |
| 10942 Subject 2625 CCGTCGTGA 2633</pre> | |
| 10943 </div> | |
| 59 | 10944 <div class=hotspot id=hotspot1-78-3> |
| 32 | 10945 <p class=range> |
| 10946 <span class=range>Range 3: 2606 to 2612</span> | |
| 10947 </p> | |
| 10948 | |
| 10949 <table class=hotspotstable> | |
| 10950 <tr> | |
| 10951 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10952 </tr> | |
| 10953 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10954 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10955 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10956 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10957 <td>0/7 (0%)</td> |
| 32 | 10958 <td>Plus/Plus</td> |
| 10959 </tr> | |
| 10960 </table> | |
| 10961 | |
| 10962 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 10963 ||||||| | |
| 10964 Subject 2606 GTCGTGA 2612</pre> | |
| 10965 </div> | |
| 10966 | |
| 10967 </div> | |
| 10968 | |
| 59 | 10969 <div class=alignment id=hit1-79> |
| 10970 | |
| 10971 <div class=linkheader> | |
| 10972 <div class=right><a href="#description1-79">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10973 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1Q86_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 10974 </div> |
| 10975 | |
| 10976 <div class=title> | |
| 10977 <p class=hittitle>Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit.</p> | |
| 10978 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10979 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1Q86_A?report=genbank&log$=nuclalign">gi|37928006|pdb|1Q86|A</a> |
| 32 | 10980 <span class=b>Length:</span> 2922 |
| 10981 <span class=b>Number of Matches:</span> 2 | |
| 10982 </p> | |
| 10983 </div> | |
| 10984 | |
| 10985 | |
| 59 | 10986 <div class=hotspot id=hotspot1-79-1> |
| 32 | 10987 <p class=range> |
| 10988 <span class=range>Range 1: 2624 to 2632</span> | |
| 10989 </p> | |
| 10990 | |
| 10991 <table class=hotspotstable> | |
| 10992 <tr> | |
| 10993 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 10994 </tr> | |
| 10995 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10996 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10997 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10998 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
10999 <td>0/9 (0%)</td> |
| 32 | 11000 <td>Plus/Plus</td> |
| 11001 </tr> | |
| 11002 </table> | |
| 11003 | |
| 11004 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11005 ||||||||| | |
| 11006 Subject 2624 CCGTCGTGA 2632</pre> | |
| 11007 </div> | |
| 59 | 11008 <div class=hotspot id=hotspot1-79-2> |
| 32 | 11009 <p class=range> |
| 11010 <span class=range>Range 2: 2605 to 2611</span> | |
| 11011 </p> | |
| 11012 | |
| 11013 <table class=hotspotstable> | |
| 11014 <tr> | |
| 11015 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11016 </tr> | |
| 11017 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11018 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11019 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11020 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11021 <td>0/7 (0%)</td> |
| 32 | 11022 <td>Plus/Plus</td> |
| 11023 </tr> | |
| 11024 </table> | |
| 11025 | |
| 11026 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11027 ||||||| | |
| 11028 Subject 2605 GTCGTGA 2611</pre> | |
| 11029 </div> | |
| 11030 | |
| 11031 </div> | |
| 11032 | |
| 59 | 11033 <div class=alignment id=hit1-80> |
| 11034 | |
| 11035 <div class=linkheader> | |
| 11036 <div class=right><a href="#description1-80">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11037 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1JJ2_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11038 </div> |
| 11039 | |
| 11040 <div class=title> | |
| 11041 <p class=hittitle>Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution </p> | |
| 11042 <p class=titleinfo> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11043 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1JJ2_0?report=genbank&log$=nuclalign">gi|15825941|pdb|1JJ2|0</a> |
| 32 | 11044 <span class=b>Length:</span> 2922 |
| 11045 <span class=b>Number of Matches:</span> 2 | |
| 11046 </p> | |
| 11047 </div> | |
| 11048 | |
| 59 | 11049 <a class=showmoretitles onclick="toggle_visibility('moretitles1-80'); return false;" href=''> |
| 32 | 11050 See 16 more title(s) |
| 11051 </a> | |
| 11052 | |
| 59 | 11053 <div class=moretitles id=moretitles1-80 style="display: none"> |
| 32 | 11054 <div class=title> |
| 11055 <p class=hittitle>Chain 0, The Haloarcula Marismortui 50s Complexed With A Pretranslocational Intermediate In Protein Synthesis </p> | |
| 11056 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11057 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|20150986|pdb|1KQS|0</a> |
| 32 | 11058 </p> |
| 11059 </div> | |
| 11060 <div class=title> | |
| 11061 <p class=hittitle>Chain A, Co-Crystal Structure Of Azithromycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11062 <p class=titleinfo> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11063 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|22219324|pdb|1M1K|A</a> |
| 32 | 11064 </p> |
| 11065 </div> | |
| 11066 <div class=title> | |
| 11067 <p class=hittitle>Chain A, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And Sparsomycin Bound To The 50s Ribosomal Subunit </p> | |
| 11068 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11069 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|24159019|pdb|1M90|A</a> |
| 32 | 11070 </p> |
| 11071 </div> | |
| 11072 <div class=title> | |
| 11073 <p class=hittitle>Chain A, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit </p> | |
| 11074 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11075 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|34811116|pdb|1K73|A</a> |
| 32 | 11076 </p> |
| 11077 </div> | |
| 11078 <div class=title> | |
| 11079 <p class=hittitle>Chain A, Structure Of Large Ribosomal Subunit In Complex With Virginiamycin M </p> | |
| 11080 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11081 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|34811185|pdb|1N8R|A</a> |
| 32 | 11082 </p> |
| 11083 </div> | |
| 11084 <div class=title> | |
| 11085 <p class=hittitle>Chain A, Structure Of Chloramphenicol Bound To The 50s Ribosomal Subunit </p> | |
| 11086 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11087 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|34811215|pdb|1NJI|A</a> |
| 32 | 11088 </p> |
| 11089 </div> | |
| 11090 <div class=title> | |
| 11091 <p class=hittitle>Chain A, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl Transferase Center Of The 50s Ribosomal Subunit </p> | |
| 11092 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11093 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|37927899|pdb|1Q7Y|A</a> |
| 32 | 11094 </p> |
| 11095 </div> | |
| 11096 <div class=title> | |
| 11097 <p class=hittitle>Chain A, Crystal Structure Of Minihelix With 3' Puromycin Bound To A- Site Of The 50s Ribosomal Subunit. </p> | |
| 11098 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11099 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|37927934|pdb|1Q81|A</a> |
| 32 | 11100 </p> |
| 11101 </div> | |
| 11102 <div class=title> | |
| 11103 <p class=hittitle>Chain A, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of The 50s Ribosomal Subunit </p> | |
| 11104 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11105 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|37927970|pdb|1Q82|A</a> |
| 32 | 11106 </p> |
| 11107 </div> | |
| 11108 <div class=title> | |
| 11109 <p class=hittitle>Chain 0, Structure Of A Deacylated Trna Minihelix Bound To The E Site Of The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11110 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11111 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|39654670|pdb|1QVF|0</a> |
| 32 | 11112 </p> |
| 11113 </div> | |
| 11114 <div class=title> | |
| 11115 <p class=hittitle>Chain 0, Structure Of Cca Oligonucleotide Bound To The Trna Binding Sites Of The Large Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11116 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11117 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|39654701|pdb|1QVG|0</a> |
| 32 | 11118 </p> |
| 11119 </div> | |
| 11120 <div class=title> | |
| 11121 <p class=hittitle>Chain A, Co-Crystal Structure Of Carbomycin A Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11122 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11123 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157878615|pdb|1K8A|A</a> |
| 32 | 11124 </p> |
| 11125 </div> | |
| 11126 <div class=title> | |
| 11127 <p class=hittitle>Chain A, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11128 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11129 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157878625|pdb|1K9M|A</a> |
| 32 | 11130 </p> |
| 11131 </div> | |
| 11132 <div class=title> | |
| 11133 <p class=hittitle>Chain A, Co-crystal Structure Of Spiramycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui </p> | |
| 11134 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11135 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157878639|pdb|1KD1|A</a> |
| 32 | 11136 </p> |
| 11137 </div> | |
| 11138 <div class=title> | |
| 11139 <p class=hittitle>Chain 0, Trigger Factor Ribosome Binding Domain In Complex With 50s </p> | |
| 11140 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11141 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|157880605|pdb|1W2B|0</a> |
| 32 | 11142 </p> |
| 11143 </div> | |
| 11144 <div class=title> | |
| 11145 <p class=hittitle>Chain 0, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound To The 50s Ribosomal Subunit Of H. Marismortui</p> | |
| 11146 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11147 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|228311909|pdb|3CXC|0</a> |
| 32 | 11148 </p> |
| 11149 </div> | |
| 11150 </div> | |
| 11151 | |
| 59 | 11152 <div class=hotspot id=hotspot1-80-1> |
| 32 | 11153 <p class=range> |
| 11154 <span class=range>Range 1: 2624 to 2632</span> | |
| 11155 </p> | |
| 11156 | |
| 11157 <table class=hotspotstable> | |
| 11158 <tr> | |
| 11159 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11160 </tr> | |
| 11161 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11162 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11163 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11164 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11165 <td>0/9 (0%)</td> |
| 32 | 11166 <td>Plus/Plus</td> |
| 11167 </tr> | |
| 11168 </table> | |
| 11169 | |
| 11170 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11171 ||||||||| | |
| 11172 Subject 2624 CCGTCGTGA 2632</pre> | |
| 11173 </div> | |
| 59 | 11174 <div class=hotspot id=hotspot1-80-2> |
| 32 | 11175 <p class=range> |
| 11176 <span class=range>Range 2: 2605 to 2611</span> | |
| 11177 </p> | |
| 11178 | |
| 11179 <table class=hotspotstable> | |
| 11180 <tr> | |
| 11181 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11182 </tr> | |
| 11183 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11184 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11185 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11186 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11187 <td>0/7 (0%)</td> |
| 32 | 11188 <td>Plus/Plus</td> |
| 11189 </tr> | |
| 11190 </table> | |
| 11191 | |
| 11192 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11193 ||||||| | |
| 11194 Subject 2605 GTCGTGA 2611</pre> | |
| 11195 </div> | |
| 11196 | |
| 11197 </div> | |
| 11198 | |
| 59 | 11199 <div class=alignment id=hit1-81> |
| 11200 | |
| 11201 <div class=linkheader> | |
| 11202 <div class=right><a href="#description1-81">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11203 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1KC8_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11204 </div> |
| 11205 | |
| 11206 <div class=title> | |
| 11207 <p class=hittitle>Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit</p> | |
| 11208 <p class=titleinfo> | |
|
118
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fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11209 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1KC8_A?report=genbank&log$=nuclalign">gi|34811146|pdb|1KC8|A</a> |
| 32 | 11210 <span class=b>Length:</span> 2922 |
| 11211 <span class=b>Number of Matches:</span> 2 | |
| 11212 </p> | |
| 11213 </div> | |
| 11214 | |
| 11215 | |
| 59 | 11216 <div class=hotspot id=hotspot1-81-1> |
| 32 | 11217 <p class=range> |
| 11218 <span class=range>Range 1: 2624 to 2632</span> | |
| 11219 </p> | |
| 11220 | |
| 11221 <table class=hotspotstable> | |
| 11222 <tr> | |
| 11223 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11224 </tr> | |
| 11225 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11226 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11227 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11228 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11229 <td>0/9 (0%)</td> |
| 32 | 11230 <td>Plus/Plus</td> |
| 11231 </tr> | |
| 11232 </table> | |
| 11233 | |
| 11234 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11235 ||||||||| | |
| 11236 Subject 2624 CCGTCGTGA 2632</pre> | |
| 11237 </div> | |
| 59 | 11238 <div class=hotspot id=hotspot1-81-2> |
| 32 | 11239 <p class=range> |
| 11240 <span class=range>Range 2: 2605 to 2611</span> | |
| 11241 </p> | |
| 11242 | |
| 11243 <table class=hotspotstable> | |
| 11244 <tr> | |
| 11245 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11246 </tr> | |
| 11247 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11248 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11249 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11250 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11251 <td>0/7 (0%)</td> |
| 32 | 11252 <td>Plus/Plus</td> |
| 11253 </tr> | |
| 11254 </table> | |
| 11255 | |
| 11256 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11257 ||||||| | |
| 11258 Subject 2605 GTCGTGA 2611</pre> | |
| 11259 </div> | |
| 11260 | |
| 11261 </div> | |
| 11262 | |
| 59 | 11263 <div class=alignment id=hit1-82> |
| 11264 | |
| 11265 <div class=linkheader> | |
| 11266 <div class=right><a href="#description1-82">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11267 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFK_0?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11268 </div> |
| 11269 | |
| 11270 <div class=title> | |
| 11271 <p class=hittitle>Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution</p> | |
| 11272 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11273 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFK_0?report=genbank&log$=nuclalign">gi|10120918|pdb|1FFK|0</a> |
| 32 | 11274 <span class=b>Length:</span> 2922 |
| 11275 <span class=b>Number of Matches:</span> 2 | |
| 11276 </p> | |
| 11277 </div> | |
| 11278 | |
| 11279 | |
| 59 | 11280 <div class=hotspot id=hotspot1-82-1> |
| 32 | 11281 <p class=range> |
| 11282 <span class=range>Range 1: 2624 to 2632</span> | |
| 11283 </p> | |
| 11284 | |
| 11285 <table class=hotspotstable> | |
| 11286 <tr> | |
| 11287 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11288 </tr> | |
| 11289 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11290 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11291 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11292 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11293 <td>0/9 (0%)</td> |
| 32 | 11294 <td>Plus/Plus</td> |
| 11295 </tr> | |
| 11296 </table> | |
| 11297 | |
| 11298 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11299 ||||||||| | |
| 11300 Subject 2624 CCGTCGTGA 2632</pre> | |
| 11301 </div> | |
| 59 | 11302 <div class=hotspot id=hotspot1-82-2> |
| 32 | 11303 <p class=range> |
| 11304 <span class=range>Range 2: 2605 to 2611</span> | |
| 11305 </p> | |
| 11306 | |
| 11307 <table class=hotspotstable> | |
| 11308 <tr> | |
| 11309 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11310 </tr> | |
| 11311 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11312 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11313 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11314 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11315 <td>0/7 (0%)</td> |
| 32 | 11316 <td>Plus/Plus</td> |
| 11317 </tr> | |
| 11318 </table> | |
| 11319 | |
| 11320 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11321 ||||||| | |
| 11322 Subject 2605 GTCGTGA 2611</pre> | |
| 11323 </div> | |
| 11324 | |
| 11325 </div> | |
| 11326 | |
| 59 | 11327 <div class=alignment id=hit1-83> |
| 11328 | |
| 11329 <div class=linkheader> | |
| 11330 <div class=right><a href="#description1-83">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11331 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FG0_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11332 </div> |
| 11333 | |
| 11334 <div class=title> | |
| 11335 <p class=hittitle>Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound</p> | |
| 11336 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11337 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FG0_A?report=genbank&log$=nuclalign">gi|10120728|pdb|1FG0|A</a> |
| 32 | 11338 <span class=b>Length:</span> 602 |
| 11339 <span class=b>Number of Matches:</span> 2 | |
| 11340 </p> | |
| 11341 </div> | |
| 11342 | |
| 11343 | |
| 59 | 11344 <div class=hotspot id=hotspot1-83-1> |
| 32 | 11345 <p class=range> |
| 11346 <span class=range>Range 1: 563 to 571</span> | |
| 11347 </p> | |
| 11348 | |
| 11349 <table class=hotspotstable> | |
| 11350 <tr> | |
| 11351 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11352 </tr> | |
| 11353 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11354 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11355 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11356 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11357 <td>0/9 (0%)</td> |
| 32 | 11358 <td>Plus/Plus</td> |
| 11359 </tr> | |
| 11360 </table> | |
| 11361 | |
| 11362 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11363 ||||||||| | |
| 11364 Subject 563 CCGTCGTGA 571</pre> | |
| 11365 </div> | |
| 59 | 11366 <div class=hotspot id=hotspot1-83-2> |
| 32 | 11367 <p class=range> |
| 11368 <span class=range>Range 2: 544 to 550</span> | |
| 11369 </p> | |
| 11370 | |
| 11371 <table class=hotspotstable> | |
| 11372 <tr> | |
| 11373 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11374 </tr> | |
| 11375 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11376 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11377 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11378 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11379 <td>0/7 (0%)</td> |
| 32 | 11380 <td>Plus/Plus</td> |
| 11381 </tr> | |
| 11382 </table> | |
| 11383 | |
| 11384 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11385 ||||||| | |
| 11386 Subject 544 GTCGTGA 550</pre> | |
| 11387 </div> | |
| 11388 | |
| 11389 </div> | |
| 11390 | |
| 59 | 11391 <div class=alignment id=hit1-84> |
| 11392 | |
| 11393 <div class=linkheader> | |
| 11394 <div class=right><a href="#description1-84">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11395 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFZ_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11396 </div> |
| 11397 | |
| 11398 <div class=title> | |
| 11399 <p class=hittitle>Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin</p> | |
| 11400 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11401 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1FFZ_A?report=genbank&log$=nuclalign">gi|10120727|pdb|1FFZ|A</a> |
| 32 | 11402 <span class=b>Length:</span> 602 |
| 11403 <span class=b>Number of Matches:</span> 2 | |
| 11404 </p> | |
| 11405 </div> | |
| 11406 | |
| 11407 | |
| 59 | 11408 <div class=hotspot id=hotspot1-84-1> |
| 32 | 11409 <p class=range> |
| 11410 <span class=range>Range 1: 563 to 571</span> | |
| 11411 </p> | |
| 11412 | |
| 11413 <table class=hotspotstable> | |
| 11414 <tr> | |
| 11415 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11416 </tr> | |
| 11417 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11418 <td>18.3341 bits (9)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11419 <td>11.9013</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11420 <td>9/9 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11421 <td>0/9 (0%)</td> |
| 32 | 11422 <td>Plus/Plus</td> |
| 11423 </tr> | |
| 11424 </table> | |
| 11425 | |
| 11426 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 11427 ||||||||| | |
| 11428 Subject 563 CCGTCGTGA 571</pre> | |
| 11429 </div> | |
| 59 | 11430 <div class=hotspot id=hotspot1-84-2> |
| 32 | 11431 <p class=range> |
| 11432 <span class=range>Range 2: 544 to 550</span> | |
| 11433 </p> | |
| 11434 | |
| 11435 <table class=hotspotstable> | |
| 11436 <tr> | |
| 11437 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11438 </tr> | |
| 11439 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11440 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11441 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11442 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11443 <td>0/7 (0%)</td> |
| 32 | 11444 <td>Plus/Plus</td> |
| 11445 </tr> | |
| 11446 </table> | |
| 11447 | |
| 11448 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 11449 ||||||| | |
| 11450 Subject 544 GTCGTGA 550</pre> | |
| 11451 </div> | |
| 11452 | |
| 11453 </div> | |
| 11454 | |
| 59 | 11455 <div class=alignment id=hit1-85> |
| 11456 | |
| 11457 <div class=linkheader> | |
| 11458 <div class=right><a href="#description1-85">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11459 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_F?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11460 </div> |
| 11461 | |
| 11462 <div class=title> | |
| 11463 <p class=hittitle>Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate</p> | |
| 11464 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11465 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_F?report=genbank&log$=nuclalign">gi|558705015|pdb|4LGT|F</a> |
| 32 | 11466 <span class=b>Length:</span> 21 |
| 11467 <span class=b>Number of Matches:</span> 1 | |
| 11468 </p> | |
| 11469 </div> | |
| 11470 | |
| 11471 | |
| 59 | 11472 <div class=hotspot id=hotspot1-85-1> |
| 32 | 11473 <p class=range> |
| 11474 <span class=range>Range 1: 5 to 12</span> | |
| 11475 </p> | |
| 11476 | |
| 11477 <table class=hotspotstable> | |
| 11478 <tr> | |
| 11479 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11480 </tr> | |
| 11481 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11482 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11483 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11484 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11485 <td>0/8 (0%)</td> |
| 32 | 11486 <td>Plus/Plus</td> |
| 11487 </tr> | |
| 11488 </table> | |
| 11489 | |
| 11490 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11491 |||||||| | |
| 11492 Subject 5 CGTCGTGA 12</pre> | |
| 11493 </div> | |
| 11494 | |
| 11495 </div> | |
| 11496 | |
| 59 | 11497 <div class=alignment id=hit1-86> |
| 11498 | |
| 11499 <div class=linkheader> | |
| 11500 <div class=right><a href="#description1-86">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11501 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_E?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11502 </div> |
| 11503 | |
| 11504 <div class=title> | |
| 11505 <p class=hittitle>Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate</p> | |
| 11506 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11507 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4LGT_E?report=genbank&log$=nuclalign">gi|558705013|pdb|4LGT|E</a> |
| 32 | 11508 <span class=b>Length:</span> 21 |
| 11509 <span class=b>Number of Matches:</span> 1 | |
| 11510 </p> | |
| 11511 </div> | |
| 11512 | |
| 11513 | |
| 59 | 11514 <div class=hotspot id=hotspot1-86-1> |
| 32 | 11515 <p class=range> |
| 11516 <span class=range>Range 1: 5 to 12</span> | |
| 11517 </p> | |
| 11518 | |
| 11519 <table class=hotspotstable> | |
| 11520 <tr> | |
| 11521 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11522 </tr> | |
| 11523 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11524 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11525 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11526 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11527 <td>0/8 (0%)</td> |
| 32 | 11528 <td>Plus/Plus</td> |
| 11529 </tr> | |
| 11530 </table> | |
| 11531 | |
| 11532 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11533 |||||||| | |
| 11534 Subject 5 CGTCGTGA 12</pre> | |
| 11535 </div> | |
| 11536 | |
| 11537 </div> | |
| 11538 | |
| 59 | 11539 <div class=alignment id=hit1-87> |
| 11540 | |
| 11541 <div class=linkheader> | |
| 11542 <div class=right><a href="#description1-87">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11543 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BTD_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11544 </div> |
| 11545 | |
| 11546 <div class=title> | |
| 11547 <p class=hittitle>Chain A, Thermus Thermophilus Ribosome</p> | |
| 11548 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11549 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BTD_A?report=genbank&log$=nuclalign">gi|529280935|pdb|4BTD|A</a> |
| 32 | 11550 <span class=b>Length:</span> 2915 |
| 11551 <span class=b>Number of Matches:</span> 2 | |
| 11552 </p> | |
| 11553 </div> | |
| 11554 | |
| 11555 | |
| 59 | 11556 <div class=hotspot id=hotspot1-87-1> |
| 32 | 11557 <p class=range> |
| 11558 <span class=range>Range 1: 2048 to 2055</span> | |
| 11559 </p> | |
| 11560 | |
| 11561 <table class=hotspotstable> | |
| 11562 <tr> | |
| 11563 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11564 </tr> | |
| 11565 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11566 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11567 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11568 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11569 <td>0/8 (0%)</td> |
| 32 | 11570 <td>Plus/Plus</td> |
| 11571 </tr> | |
| 11572 </table> | |
| 11573 | |
| 11574 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 11575 |||||||| | |
| 11576 Subject 2048 CGTGAAGA 2055</pre> | |
| 11577 </div> | |
| 59 | 11578 <div class=hotspot id=hotspot1-87-2> |
| 32 | 11579 <p class=range> |
| 11580 <span class=range>Range 2: 2603 to 2610</span> | |
| 11581 </p> | |
| 11582 | |
| 11583 <table class=hotspotstable> | |
| 11584 <tr> | |
| 11585 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11586 </tr> | |
| 11587 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11588 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11589 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11590 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11591 <td>0/8 (0%)</td> |
| 32 | 11592 <td>Plus/Plus</td> |
| 11593 </tr> | |
| 11594 </table> | |
| 11595 | |
| 11596 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11597 |||||||| | |
| 11598 Subject 2603 CGTCGTGA 2610</pre> | |
| 11599 </div> | |
| 11600 | |
| 11601 </div> | |
| 11602 | |
| 59 | 11603 <div class=alignment id=hit1-88> |
| 11604 | |
| 11605 <div class=linkheader> | |
| 11606 <div class=right><a href="#description1-88">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11607 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4L6J_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11608 </div> |
| 11609 | |
| 11610 <div class=title> | |
| 11611 <p class=hittitle>Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. </p> | |
| 11612 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11613 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4L6J_A?report=genbank&log$=nuclalign">gi|528082310|pdb|4L6J|A</a> |
| 32 | 11614 <span class=b>Length:</span> 2879 |
| 11615 <span class=b>Number of Matches:</span> 2 | |
| 11616 </p> | |
| 11617 </div> | |
| 11618 | |
| 59 | 11619 <a class=showmoretitles onclick="toggle_visibility('moretitles1-88'); return false;" href=''> |
| 32 | 11620 See 1 more title(s) |
| 11621 </a> | |
| 11622 | |
| 59 | 11623 <div class=moretitles id=moretitles1-88 style="display: none"> |
| 32 | 11624 <div class=title> |
| 11625 <p class=hittitle>Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The Second 70s Ribosome</p> | |
| 11626 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11627 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|528082364|pdb|4L6L|A</a> |
| 32 | 11628 </p> |
| 11629 </div> | |
| 11630 </div> | |
| 11631 | |
| 59 | 11632 <div class=hotspot id=hotspot1-88-1> |
| 32 | 11633 <p class=range> |
| 11634 <span class=range>Range 1: 2021 to 2028</span> | |
| 11635 </p> | |
| 11636 | |
| 11637 <table class=hotspotstable> | |
| 11638 <tr> | |
| 11639 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11640 </tr> | |
| 11641 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11642 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11643 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11644 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11645 <td>0/8 (0%)</td> |
| 32 | 11646 <td>Plus/Plus</td> |
| 11647 </tr> | |
| 11648 </table> | |
| 11649 | |
| 11650 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 11651 |||||||| | |
| 11652 Subject 2021 CGTGAAGA 2028</pre> | |
| 11653 </div> | |
| 59 | 11654 <div class=hotspot id=hotspot1-88-2> |
| 32 | 11655 <p class=range> |
| 11656 <span class=range>Range 2: 2576 to 2583</span> | |
| 11657 </p> | |
| 11658 | |
| 11659 <table class=hotspotstable> | |
| 11660 <tr> | |
| 11661 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11662 </tr> | |
| 11663 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11664 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11665 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11666 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11667 <td>0/8 (0%)</td> |
| 32 | 11668 <td>Plus/Plus</td> |
| 11669 </tr> | |
| 11670 </table> | |
| 11671 | |
| 11672 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11673 |||||||| | |
| 11674 Subject 2576 CGTCGTGA 2583</pre> | |
| 11675 </div> | |
| 11676 | |
| 11677 </div> | |
| 11678 | |
| 59 | 11679 <div class=alignment id=hit1-89> |
| 11680 | |
| 11681 <div class=linkheader> | |
| 11682 <div class=right><a href="#description1-89">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11683 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4KFI_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11684 </div> |
| 11685 | |
| 11686 <div class=title> | |
| 11687 <p class=hittitle>Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit </p> | |
| 11688 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11689 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4KFI_A?report=genbank&log$=nuclalign">gi|520729408|pdb|4KFI|A</a> |
| 32 | 11690 <span class=b>Length:</span> 2879 |
| 11691 <span class=b>Number of Matches:</span> 2 | |
| 11692 </p> | |
| 11693 </div> | |
| 11694 | |
| 59 | 11695 <a class=showmoretitles onclick="toggle_visibility('moretitles1-89'); return false;" href=''> |
| 32 | 11696 See 1 more title(s) |
| 11697 </a> | |
| 11698 | |
| 59 | 11699 <div class=moretitles id=moretitles1-89 style="display: none"> |
| 32 | 11700 <div class=title> |
| 11701 <p class=hittitle>Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The B Subunit</p> | |
| 11702 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11703 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|520729463|pdb|4KFL|A</a> |
| 32 | 11704 </p> |
| 11705 </div> | |
| 11706 </div> | |
| 11707 | |
| 59 | 11708 <div class=hotspot id=hotspot1-89-1> |
| 32 | 11709 <p class=range> |
| 11710 <span class=range>Range 1: 2021 to 2028</span> | |
| 11711 </p> | |
| 11712 | |
| 11713 <table class=hotspotstable> | |
| 11714 <tr> | |
| 11715 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11716 </tr> | |
| 11717 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11718 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11719 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11720 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11721 <td>0/8 (0%)</td> |
| 32 | 11722 <td>Plus/Plus</td> |
| 11723 </tr> | |
| 11724 </table> | |
| 11725 | |
| 11726 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 11727 |||||||| | |
| 11728 Subject 2021 CGTGAAGA 2028</pre> | |
| 11729 </div> | |
| 59 | 11730 <div class=hotspot id=hotspot1-89-2> |
| 32 | 11731 <p class=range> |
| 11732 <span class=range>Range 2: 2576 to 2583</span> | |
| 11733 </p> | |
| 11734 | |
| 11735 <table class=hotspotstable> | |
| 11736 <tr> | |
| 11737 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11738 </tr> | |
| 11739 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11740 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11741 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11742 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11743 <td>0/8 (0%)</td> |
| 32 | 11744 <td>Plus/Plus</td> |
| 11745 </tr> | |
| 11746 </table> | |
| 11747 | |
| 11748 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11749 |||||||| | |
| 11750 Subject 2576 CGTCGTGA 2583</pre> | |
| 11751 </div> | |
| 11752 | |
| 11753 </div> | |
| 11754 | |
| 59 | 11755 <div class=alignment id=hit1-90> |
| 11756 | |
| 11757 <div class=linkheader> | |
| 11758 <div class=right><a href="#description1-90">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11759 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0Q_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11760 </div> |
| 11761 | |
| 11762 <div class=title> | |
| 11763 <p class=hittitle>Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine</p> | |
| 11764 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11765 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0Q_A?report=genbank&log$=nuclalign">gi|520728860|pdb|4K0Q|A</a> |
| 32 | 11766 <span class=b>Length:</span> 2915 |
| 11767 <span class=b>Number of Matches:</span> 2 | |
| 11768 </p> | |
| 11769 </div> | |
| 11770 | |
| 11771 | |
| 59 | 11772 <div class=hotspot id=hotspot1-90-1> |
| 32 | 11773 <p class=range> |
| 11774 <span class=range>Range 1: 2048 to 2055</span> | |
| 11775 </p> | |
| 11776 | |
| 11777 <table class=hotspotstable> | |
| 11778 <tr> | |
| 11779 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11780 </tr> | |
| 11781 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11782 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11783 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11784 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11785 <td>0/8 (0%)</td> |
| 32 | 11786 <td>Plus/Plus</td> |
| 11787 </tr> | |
| 11788 </table> | |
| 11789 | |
| 11790 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 11791 |||||||| | |
| 11792 Subject 2048 CGTGAAGA 2055</pre> | |
| 11793 </div> | |
| 59 | 11794 <div class=hotspot id=hotspot1-90-2> |
| 32 | 11795 <p class=range> |
| 11796 <span class=range>Range 2: 2603 to 2610</span> | |
| 11797 </p> | |
| 11798 | |
| 11799 <table class=hotspotstable> | |
| 11800 <tr> | |
| 11801 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11802 </tr> | |
| 11803 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11804 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11805 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11806 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11807 <td>0/8 (0%)</td> |
| 32 | 11808 <td>Plus/Plus</td> |
| 11809 </tr> | |
| 11810 </table> | |
| 11811 | |
| 11812 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11813 |||||||| | |
| 11814 Subject 2603 CGTCGTGA 2610</pre> | |
| 11815 </div> | |
| 11816 | |
| 11817 </div> | |
| 11818 | |
| 59 | 11819 <div class=alignment id=hit1-91> |
| 11820 | |
| 11821 <div class=linkheader> | |
| 11822 <div class=right><a href="#description1-91">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11823 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0M_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11824 </div> |
| 11825 | |
| 11826 <div class=title> | |
| 11827 <p class=hittitle>Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine</p> | |
| 11828 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11829 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4K0M_A?report=genbank&log$=nuclalign">gi|520728802|pdb|4K0M|A</a> |
| 32 | 11830 <span class=b>Length:</span> 2915 |
| 11831 <span class=b>Number of Matches:</span> 2 | |
| 11832 </p> | |
| 11833 </div> | |
| 11834 | |
| 11835 | |
| 59 | 11836 <div class=hotspot id=hotspot1-91-1> |
| 32 | 11837 <p class=range> |
| 11838 <span class=range>Range 1: 2048 to 2055</span> | |
| 11839 </p> | |
| 11840 | |
| 11841 <table class=hotspotstable> | |
| 11842 <tr> | |
| 11843 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11844 </tr> | |
| 11845 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11846 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11847 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11848 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11849 <td>0/8 (0%)</td> |
| 32 | 11850 <td>Plus/Plus</td> |
| 11851 </tr> | |
| 11852 </table> | |
| 11853 | |
| 11854 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 11855 |||||||| | |
| 11856 Subject 2048 CGTGAAGA 2055</pre> | |
| 11857 </div> | |
| 59 | 11858 <div class=hotspot id=hotspot1-91-2> |
| 32 | 11859 <p class=range> |
| 11860 <span class=range>Range 2: 2603 to 2610</span> | |
| 11861 </p> | |
| 11862 | |
| 11863 <table class=hotspotstable> | |
| 11864 <tr> | |
| 11865 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11866 </tr> | |
| 11867 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11868 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11869 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11870 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11871 <td>0/8 (0%)</td> |
| 32 | 11872 <td>Plus/Plus</td> |
| 11873 </tr> | |
| 11874 </table> | |
| 11875 | |
| 11876 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11877 |||||||| | |
| 11878 Subject 2603 CGTCGTGA 2610</pre> | |
| 11879 </div> | |
| 11880 | |
| 11881 </div> | |
| 11882 | |
| 59 | 11883 <div class=alignment id=hit1-92> |
| 11884 | |
| 11885 <div class=linkheader> | |
| 11886 <div class=right><a href="#description1-92">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11887 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3V_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 11888 </div> |
| 11889 | |
| 11890 <div class=title> | |
| 11891 <p class=hittitle>Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)</p> | |
| 11892 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11893 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3V_A?report=genbank&log$=nuclalign">gi|512125286|pdb|3J3V|A</a> |
| 32 | 11894 <span class=b>Length:</span> 2927 |
| 11895 <span class=b>Number of Matches:</span> 5 | |
| 11896 </p> | |
| 11897 </div> | |
| 11898 | |
| 11899 | |
| 59 | 11900 <div class=hotspot id=hotspot1-92-1> |
| 32 | 11901 <p class=range> |
| 11902 <span class=range>Range 1: 2620 to 2627</span> | |
| 11903 </p> | |
| 11904 | |
| 11905 <table class=hotspotstable> | |
| 11906 <tr> | |
| 11907 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11908 </tr> | |
| 11909 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11910 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11911 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11912 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11913 <td>0/8 (0%)</td> |
| 32 | 11914 <td>Plus/Plus</td> |
| 11915 </tr> | |
| 11916 </table> | |
| 11917 | |
| 11918 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 11919 |||||||| | |
| 11920 Subject 2620 CGTCGTGA 2627</pre> | |
| 11921 </div> | |
| 59 | 11922 <div class=hotspot id=hotspot1-92-2> |
| 32 | 11923 <p class=range> |
| 11924 <span class=range>Range 2: 340 to 346</span> | |
| 11925 </p> | |
| 11926 | |
| 11927 <table class=hotspotstable> | |
| 11928 <tr> | |
| 11929 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11930 </tr> | |
| 11931 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11932 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11933 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11934 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11935 <td>0/7 (0%)</td> |
| 32 | 11936 <td>Plus/Plus</td> |
| 11937 </tr> | |
| 11938 </table> | |
| 11939 | |
| 11940 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 11941 ||||||| | |
| 11942 Subject 340 TGAAGAG 346</pre> | |
| 11943 </div> | |
| 59 | 11944 <div class=hotspot id=hotspot1-92-3> |
| 32 | 11945 <p class=range> |
| 11946 <span class=range>Range 3: 440 to 446</span> | |
| 11947 </p> | |
| 11948 | |
| 11949 <table class=hotspotstable> | |
| 11950 <tr> | |
| 11951 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11952 </tr> | |
| 11953 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11954 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11955 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11956 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11957 <td>0/7 (0%)</td> |
| 32 | 11958 <td>Plus/Plus</td> |
| 11959 </tr> | |
| 11960 </table> | |
| 11961 | |
| 11962 <pre class=alignmentgraphic>Query 3 TCCGTCG 9 | |
| 11963 ||||||| | |
| 11964 Subject 440 TCCGTCG 446</pre> | |
| 11965 </div> | |
| 59 | 11966 <div class=hotspot id=hotspot1-92-4> |
| 32 | 11967 <p class=range> |
| 11968 <span class=range>Range 4: 2056 to 2062</span> | |
| 11969 </p> | |
| 11970 | |
| 11971 <table class=hotspotstable> | |
| 11972 <tr> | |
| 11973 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11974 </tr> | |
| 11975 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11976 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11977 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11978 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11979 <td>0/7 (0%)</td> |
| 32 | 11980 <td>Plus/Plus</td> |
| 11981 </tr> | |
| 11982 </table> | |
| 11983 | |
| 11984 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 11985 ||||||| | |
| 11986 Subject 2056 GTGAAGA 2062</pre> | |
| 11987 </div> | |
| 59 | 11988 <div class=hotspot id=hotspot1-92-5> |
| 32 | 11989 <p class=range> |
| 11990 <span class=range>Range 5: 2644 to 2650</span> | |
| 11991 </p> | |
| 11992 | |
| 11993 <table class=hotspotstable> | |
| 11994 <tr> | |
| 11995 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 11996 </tr> | |
| 11997 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11998 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
11999 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12000 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12001 <td>0/7 (0%)</td> |
| 32 | 12002 <td>Plus/Plus</td> |
| 12003 </tr> | |
| 12004 </table> | |
| 12005 | |
| 12006 <pre class=alignmentgraphic>Query 3 TCCGTCG 9 | |
| 12007 ||||||| | |
| 12008 Subject 2644 TCCGTCG 2650</pre> | |
| 12009 </div> | |
| 12010 | |
| 12011 </div> | |
| 12012 | |
| 59 | 12013 <div class=alignment id=hit1-93> |
| 12014 | |
| 12015 <div class=linkheader> | |
| 12016 <div class=right><a href="#description1-93">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12017 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3W_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12018 </div> |
| 12019 | |
| 12020 <div class=title> | |
| 12021 <p class=hittitle>Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)</p> | |
| 12022 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12023 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3W_A?report=genbank&log$=nuclalign">gi|512125306|pdb|3J3W|A</a> |
| 32 | 12024 <span class=b>Length:</span> 2927 |
| 12025 <span class=b>Number of Matches:</span> 5 | |
| 12026 </p> | |
| 12027 </div> | |
| 12028 | |
| 12029 | |
| 59 | 12030 <div class=hotspot id=hotspot1-93-1> |
| 32 | 12031 <p class=range> |
| 12032 <span class=range>Range 1: 2620 to 2627</span> | |
| 12033 </p> | |
| 12034 | |
| 12035 <table class=hotspotstable> | |
| 12036 <tr> | |
| 12037 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12038 </tr> | |
| 12039 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12040 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12041 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12042 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12043 <td>0/8 (0%)</td> |
| 32 | 12044 <td>Plus/Plus</td> |
| 12045 </tr> | |
| 12046 </table> | |
| 12047 | |
| 12048 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12049 |||||||| | |
| 12050 Subject 2620 CGTCGTGA 2627</pre> | |
| 12051 </div> | |
| 59 | 12052 <div class=hotspot id=hotspot1-93-2> |
| 32 | 12053 <p class=range> |
| 12054 <span class=range>Range 2: 340 to 346</span> | |
| 12055 </p> | |
| 12056 | |
| 12057 <table class=hotspotstable> | |
| 12058 <tr> | |
| 12059 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12060 </tr> | |
| 12061 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12062 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12063 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12064 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12065 <td>0/7 (0%)</td> |
| 32 | 12066 <td>Plus/Plus</td> |
| 12067 </tr> | |
| 12068 </table> | |
| 12069 | |
| 12070 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 12071 ||||||| | |
| 12072 Subject 340 TGAAGAG 346</pre> | |
| 12073 </div> | |
| 59 | 12074 <div class=hotspot id=hotspot1-93-3> |
| 32 | 12075 <p class=range> |
| 12076 <span class=range>Range 3: 440 to 446</span> | |
| 12077 </p> | |
| 12078 | |
| 12079 <table class=hotspotstable> | |
| 12080 <tr> | |
| 12081 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12082 </tr> | |
| 12083 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12084 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12085 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12086 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12087 <td>0/7 (0%)</td> |
| 32 | 12088 <td>Plus/Plus</td> |
| 12089 </tr> | |
| 12090 </table> | |
| 12091 | |
| 12092 <pre class=alignmentgraphic>Query 3 TCCGTCG 9 | |
| 12093 ||||||| | |
| 12094 Subject 440 TCCGTCG 446</pre> | |
| 12095 </div> | |
| 59 | 12096 <div class=hotspot id=hotspot1-93-4> |
| 32 | 12097 <p class=range> |
| 12098 <span class=range>Range 4: 2056 to 2062</span> | |
| 12099 </p> | |
| 12100 | |
| 12101 <table class=hotspotstable> | |
| 12102 <tr> | |
| 12103 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12104 </tr> | |
| 12105 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12106 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12107 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12108 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12109 <td>0/7 (0%)</td> |
| 32 | 12110 <td>Plus/Plus</td> |
| 12111 </tr> | |
| 12112 </table> | |
| 12113 | |
| 12114 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 12115 ||||||| | |
| 12116 Subject 2056 GTGAAGA 2062</pre> | |
| 12117 </div> | |
| 59 | 12118 <div class=hotspot id=hotspot1-93-5> |
| 32 | 12119 <p class=range> |
| 12120 <span class=range>Range 5: 2644 to 2650</span> | |
| 12121 </p> | |
| 12122 | |
| 12123 <table class=hotspotstable> | |
| 12124 <tr> | |
| 12125 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12126 </tr> | |
| 12127 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12128 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12129 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12130 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12131 <td>0/7 (0%)</td> |
| 32 | 12132 <td>Plus/Plus</td> |
| 12133 </tr> | |
| 12134 </table> | |
| 12135 | |
| 12136 <pre class=alignmentgraphic>Query 3 TCCGTCG 9 | |
| 12137 ||||||| | |
| 12138 Subject 2644 TCCGTCG 2650</pre> | |
| 12139 </div> | |
| 12140 | |
| 12141 </div> | |
| 12142 | |
| 59 | 12143 <div class=alignment id=hit1-94> |
| 12144 | |
| 12145 <div class=linkheader> | |
| 12146 <div class=right><a href="#description1-94">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12147 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6X_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12148 </div> |
| 12149 | |
| 12150 <div class=title> | |
| 12151 <p class=hittitle>Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit</p> | |
| 12152 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12153 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6X_A?report=genbank&log$=nuclalign">gi|482676744|pdb|3V6X|A</a> |
| 32 | 12154 <span class=b>Length:</span> 2916 |
| 12155 <span class=b>Number of Matches:</span> 2 | |
| 12156 </p> | |
| 12157 </div> | |
| 12158 | |
| 12159 | |
| 59 | 12160 <div class=hotspot id=hotspot1-94-1> |
| 32 | 12161 <p class=range> |
| 12162 <span class=range>Range 1: 2048 to 2055</span> | |
| 12163 </p> | |
| 12164 | |
| 12165 <table class=hotspotstable> | |
| 12166 <tr> | |
| 12167 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12168 </tr> | |
| 12169 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12170 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12171 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12172 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12173 <td>0/8 (0%)</td> |
| 32 | 12174 <td>Plus/Plus</td> |
| 12175 </tr> | |
| 12176 </table> | |
| 12177 | |
| 12178 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 12179 |||||||| | |
| 12180 Subject 2048 CGTGAAGA 2055</pre> | |
| 12181 </div> | |
| 59 | 12182 <div class=hotspot id=hotspot1-94-2> |
| 32 | 12183 <p class=range> |
| 12184 <span class=range>Range 2: 2603 to 2610</span> | |
| 12185 </p> | |
| 12186 | |
| 12187 <table class=hotspotstable> | |
| 12188 <tr> | |
| 12189 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12190 </tr> | |
| 12191 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12192 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12193 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12194 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12195 <td>0/8 (0%)</td> |
| 32 | 12196 <td>Plus/Plus</td> |
| 12197 </tr> | |
| 12198 </table> | |
| 12199 | |
| 12200 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12201 |||||||| | |
| 12202 Subject 2603 CGTCGTGA 2610</pre> | |
| 12203 </div> | |
| 12204 | |
| 12205 </div> | |
| 12206 | |
| 59 | 12207 <div class=alignment id=hit1-95> |
| 12208 | |
| 12209 <div class=linkheader> | |
| 12210 <div class=right><a href="#description1-95">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12211 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6W_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12212 </div> |
| 12213 | |
| 12214 <div class=title> | |
| 12215 <p class=hittitle>Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit</p> | |
| 12216 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12217 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3V6W_A?report=genbank&log$=nuclalign">gi|482676712|pdb|3V6W|A</a> |
| 32 | 12218 <span class=b>Length:</span> 2916 |
| 12219 <span class=b>Number of Matches:</span> 2 | |
| 12220 </p> | |
| 12221 </div> | |
| 12222 | |
| 12223 | |
| 59 | 12224 <div class=hotspot id=hotspot1-95-1> |
| 32 | 12225 <p class=range> |
| 12226 <span class=range>Range 1: 2048 to 2055</span> | |
| 12227 </p> | |
| 12228 | |
| 12229 <table class=hotspotstable> | |
| 12230 <tr> | |
| 12231 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12232 </tr> | |
| 12233 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12234 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12235 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12236 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12237 <td>0/8 (0%)</td> |
| 32 | 12238 <td>Plus/Plus</td> |
| 12239 </tr> | |
| 12240 </table> | |
| 12241 | |
| 12242 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 12243 |||||||| | |
| 12244 Subject 2048 CGTGAAGA 2055</pre> | |
| 12245 </div> | |
| 59 | 12246 <div class=hotspot id=hotspot1-95-2> |
| 32 | 12247 <p class=range> |
| 12248 <span class=range>Range 2: 2603 to 2610</span> | |
| 12249 </p> | |
| 12250 | |
| 12251 <table class=hotspotstable> | |
| 12252 <tr> | |
| 12253 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12254 </tr> | |
| 12255 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12256 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12257 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12258 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12259 <td>0/8 (0%)</td> |
| 32 | 12260 <td>Plus/Plus</td> |
| 12261 </tr> | |
| 12262 </table> | |
| 12263 | |
| 12264 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12265 |||||||| | |
| 12266 Subject 2603 CGTCGTGA 2610</pre> | |
| 12267 </div> | |
| 12268 | |
| 12269 </div> | |
| 12270 | |
| 59 | 12271 <div class=alignment id=hit1-96> |
| 12272 | |
| 12273 <div class=linkheader> | |
| 12274 <div class=right><a href="#description1-96">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12275 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMI_DD?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12276 </div> |
| 12277 | |
| 12278 <div class=title> | |
| 12279 <p class=hittitle>Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object</p> | |
| 12280 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12281 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMI_DD?report=genbank&log$=nuclalign">gi|428697829|pdb|2YMI|DD</a> |
| 32 | 12282 <span class=b>Length:</span> 56 |
| 12283 <span class=b>Number of Matches:</span> 1 | |
| 12284 </p> | |
| 12285 </div> | |
| 12286 | |
| 12287 | |
| 59 | 12288 <div class=hotspot id=hotspot1-96-1> |
| 32 | 12289 <p class=range> |
| 12290 <span class=range>Range 1: 52 to 45</span> | |
| 12291 </p> | |
| 12292 | |
| 12293 <table class=hotspotstable> | |
| 12294 <tr> | |
| 12295 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12296 </tr> | |
| 12297 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12298 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12299 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12300 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12301 <td>0/8 (0%)</td> |
| 32 | 12302 <td>Plus/Minus</td> |
| 12303 </tr> | |
| 12304 </table> | |
| 12305 | |
| 12306 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12307 |||||||| | |
| 69 | 12308 Subject 52 CGTCGTGA 45</pre> |
| 32 | 12309 </div> |
| 12310 | |
| 12311 </div> | |
| 12312 | |
| 59 | 12313 <div class=alignment id=hit1-97> |
| 12314 | |
| 12315 <div class=linkheader> | |
| 12316 <div class=right><a href="#description1-97">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12317 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMF_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12318 </div> |
| 12319 | |
| 12320 <div class=title> | |
| 12321 <p class=hittitle>Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object</p> | |
| 12322 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12323 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2YMF_A?report=genbank&log$=nuclalign">gi|428697789|pdb|2YMF|A</a> |
| 32 | 12324 <span class=b>Length:</span> 4896 |
| 12325 <span class=b>Number of Matches:</span> 2 | |
| 12326 </p> | |
| 12327 </div> | |
| 12328 | |
| 12329 | |
| 59 | 12330 <div class=hotspot id=hotspot1-97-1> |
| 32 | 12331 <p class=range> |
| 12332 <span class=range>Range 1: 575 to 582</span> | |
| 12333 </p> | |
| 12334 | |
| 12335 <table class=hotspotstable> | |
| 12336 <tr> | |
| 12337 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12338 </tr> | |
| 12339 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12340 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12341 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12342 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12343 <td>0/8 (0%)</td> |
| 32 | 12344 <td>Plus/Plus</td> |
| 12345 </tr> | |
| 12346 </table> | |
| 12347 | |
| 12348 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12349 |||||||| | |
| 12350 Subject 575 CGTCGTGA 582</pre> | |
| 12351 </div> | |
| 59 | 12352 <div class=hotspot id=hotspot1-97-2> |
| 32 | 12353 <p class=range> |
| 12354 <span class=range>Range 2: 561 to 567</span> | |
| 12355 </p> | |
| 12356 | |
| 12357 <table class=hotspotstable> | |
| 12358 <tr> | |
| 12359 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12360 </tr> | |
| 12361 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12362 <td>14.3694 bits (7)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12363 <td>185.82</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12364 <td>7/7 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12365 <td>0/7 (0%)</td> |
| 32 | 12366 <td>Plus/Plus</td> |
| 12367 </tr> | |
| 12368 </table> | |
| 12369 | |
| 12370 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 12371 ||||||| | |
| 12372 Subject 561 CCGTCGT 567</pre> | |
| 12373 </div> | |
| 12374 | |
| 12375 </div> | |
| 12376 | |
| 59 | 12377 <div class=alignment id=hit1-98> |
| 12378 | |
| 12379 <div class=linkheader> | |
| 12380 <div class=right><a href="#description1-98">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12381 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2J01_A?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12382 </div> |
| 12383 | |
| 12384 <div class=title> | |
| 12385 <p class=hittitle>Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. </p> | |
| 12386 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12387 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/2J01_A?report=genbank&log$=nuclalign">gi|396639330|pdb|2J01|A</a> |
| 32 | 12388 <span class=b>Length:</span> 2787 |
| 12389 <span class=b>Number of Matches:</span> 2 | |
| 12390 </p> | |
| 12391 </div> | |
| 12392 | |
| 59 | 12393 <a class=showmoretitles onclick="toggle_visibility('moretitles1-98'); return false;" href=''> |
| 32 | 12394 See 1 more title(s) |
| 12395 </a> | |
| 12396 | |
| 59 | 12397 <div class=moretitles id=moretitles1-98 style="display: none"> |
| 32 | 12398 <div class=title> |
| 12399 <p class=hittitle>Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii.</p> | |
| 12400 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12401 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/?report=genbank&log$=nuclalign">gi|396639355|pdb|2J03|A</a> |
| 32 | 12402 </p> |
| 12403 </div> | |
| 12404 </div> | |
| 12405 | |
| 59 | 12406 <div class=hotspot id=hotspot1-98-1> |
| 32 | 12407 <p class=range> |
| 12408 <span class=range>Range 1: 1948 to 1955</span> | |
| 12409 </p> | |
| 12410 | |
| 12411 <table class=hotspotstable> | |
| 12412 <tr> | |
| 12413 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12414 </tr> | |
| 12415 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12416 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12417 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12418 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12419 <td>0/8 (0%)</td> |
| 32 | 12420 <td>Plus/Plus</td> |
| 12421 </tr> | |
| 12422 </table> | |
| 12423 | |
| 12424 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 12425 |||||||| | |
| 12426 Subject 1948 CGTGAAGA 1955</pre> | |
| 12427 </div> | |
| 59 | 12428 <div class=hotspot id=hotspot1-98-2> |
| 32 | 12429 <p class=range> |
| 12430 <span class=range>Range 2: 2474 to 2481</span> | |
| 12431 </p> | |
| 12432 | |
| 12433 <table class=hotspotstable> | |
| 12434 <tr> | |
| 12435 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12436 </tr> | |
| 12437 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12438 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12439 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12440 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12441 <td>0/8 (0%)</td> |
| 32 | 12442 <td>Plus/Plus</td> |
| 12443 </tr> | |
| 12444 </table> | |
| 12445 | |
| 12446 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12447 |||||||| | |
| 12448 Subject 2474 CGTCGTGA 2481</pre> | |
| 12449 </div> | |
| 12450 | |
| 12451 </div> | |
| 12452 | |
| 59 | 12453 <div class=alignment id=hit1-99> |
| 12454 | |
| 12455 <div class=linkheader> | |
| 12456 <div class=right><a href="#description1-99">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12457 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQX_C?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12458 </div> |
| 12459 | |
| 12460 <div class=title> | |
| 12461 <p class=hittitle>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium</p> | |
| 12462 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12463 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQX_C?report=genbank&log$=nuclalign">gi|393715375|pdb|4AQX|C</a> |
| 32 | 12464 <span class=b>Length:</span> 14 |
| 12465 <span class=b>Number of Matches:</span> 1 | |
| 12466 </p> | |
| 12467 </div> | |
| 12468 | |
| 12469 | |
| 59 | 12470 <div class=hotspot id=hotspot1-99-1> |
| 32 | 12471 <p class=range> |
| 12472 <span class=range>Range 1: 7 to 14</span> | |
| 12473 </p> | |
| 12474 | |
| 12475 <table class=hotspotstable> | |
| 12476 <tr> | |
| 12477 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12478 </tr> | |
| 12479 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12480 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12481 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12482 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12483 <td>0/8 (0%)</td> |
| 32 | 12484 <td>Plus/Plus</td> |
| 12485 </tr> | |
| 12486 </table> | |
| 12487 | |
| 12488 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12489 |||||||| | |
| 12490 Subject 7 CGTCGTGA 14</pre> | |
| 12491 </div> | |
| 12492 | |
| 12493 </div> | |
| 12494 | |
| 59 | 12495 <div class=alignment id=hit1-100> |
| 12496 | |
| 12497 <div class=linkheader> | |
| 12498 <div class=right><a href="#description1-100">Descriptions</a></div> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12499 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQU_C?report=genbank&log$=nuclalign">Gene Bank</a> |
| 32 | 12500 </div> |
| 12501 | |
| 12502 <div class=title> | |
| 12503 <p class=hittitle>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium</p> | |
| 12504 <p class=titleinfo> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12505 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQU_C?report=genbank&log$=nuclalign">gi|393715371|pdb|4AQU|C</a> |
| 32 | 12506 <span class=b>Length:</span> 24 |
| 12507 <span class=b>Number of Matches:</span> 1 | |
| 12508 </p> | |
| 12509 </div> | |
| 12510 | |
| 12511 | |
| 59 | 12512 <div class=hotspot id=hotspot1-100-1> |
| 32 | 12513 <p class=range> |
| 12514 <span class=range>Range 1: 7 to 14</span> | |
| 12515 </p> | |
| 12516 | |
| 12517 <table class=hotspotstable> | |
| 12518 <tr> | |
| 12519 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 12520 </tr> | |
| 12521 <tr> | |
|
118
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12522 <td>16.3517 bits (8)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12523 <td>47.0266</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12524 <td>8/8 (100%)</td> |
|
7f3f8c10f44b
fix for Rikilt issues 8, 11, 12, 14
Jan Kanis <jan.code@jankanis.nl>
parents:
114
diff
changeset
|
12525 <td>0/8 (0%)</td> |
| 32 | 12526 <td>Plus/Plus</td> |
| 12527 </tr> | |
| 12528 </table> | |
| 12529 | |
| 12530 <pre class=alignmentgraphic>Query 5 CGTCGTGA 12 | |
| 12531 |||||||| | |
| 12532 Subject 7 CGTCGTGA 14</pre> | |
| 12533 </div> | |
| 12534 | |
| 12535 </div> | |
| 12536 | |
| 12537 </div></div> | |
| 12538 </section> | |
| 12539 </section> | |
| 12540 | |
| 12541 </div> | |
| 12542 | |
| 12543 <footer> | |
|
33
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
32
diff
changeset
|
12544 This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>. |
| 32 | 12545 </footer> |
| 12546 </body> | |
| 12547 </html> | |
| 12548 |