Mercurial > repos > jankanis > blast2html
annotate blast2html.xml @ 89:8a712d393559
add zlib dependency
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Tue, 24 Jun 2014 17:07:46 +0200 |
parents | 2edb77030a9e |
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1 <tool id="blast2html" name="blast2html" version="0.0.10"> |
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2 |
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3 <description>Convert BLAST XML to HTML</description> |
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4 |
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5 <requirements> |
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6 <requirement name="package" version="0.2">blast2html_venv</requirement> |
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7 </requirements> |
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8 |
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9 <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command> |
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10 |
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11 <stdio> |
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12 <!-- Any exit code other than 0 is an error --> |
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13 <exit_code range="1:" /> |
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14 <exit_code range=":-1" /> |
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15 </stdio> |
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16 |
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17 <inputs> |
66 | 18 <param format="blastxml" name="input" type="data" label="Source file"/> |
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19 </inputs> |
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20 |
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21 <outputs> |
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22 <data format="html" name="output" /> |
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23 </outputs> |
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24 |
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25 <tests> |
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26 <test> |
32 | 27 <param name="input" value="blast xml example1.xml"/> |
28 <output name="out_file1" file="blast xml example1.html"/> | |
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29 </test> |
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30 <test> |
32 | 31 <param name="input" value="blast xml example2.xml"/> |
32 <output name="out_file1" file="blast xml example2.html"/> | |
33 </test> | |
34 <test> | |
35 <param name="input" value="blast xml example3.xml"/> | |
36 <output name="out_file1" file="blast xml example3.html"/> | |
37 </test> | |
38 <test> | |
39 <param name="input" value="blast xml example4.xml"/> | |
40 <output name="out_file1" file="blast xml example4.html"/> | |
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41 </test> |
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42 </tests> |
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43 |
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44 <help> |
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45 This tool converts the default BLAST XML result into a HTML document |
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46 </help> |
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47 |
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48 </tool> |