Queries
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 7.011e-08 | 100% | Subject_3 |
Alignments
DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
Sequence ID: Subject_3 Length: 323 Number of Matches: 1
Range 1: 200 to 219
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Plus |
Query 1 AGCGCGCAAACTAGGATAAA 20 |||||||||||||||||||| Subject 200 AGCGCGCAAACTAGGATAAA 219
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 7.011e-08 | 100% | Subject_6 |
Alignments
AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
Sequence ID: Subject_6 Length: 2457 Number of Matches: 1
Range 1: 2119 to 2138
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Plus |
Query 1 AGCGCGCAAACTAGGATAAA 20 |||||||||||||||||||| Subject 2119 AGCGCGCAAACTAGGATAAA 2138
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
31.9 | 31.9 | 85% | 2.981e-06 | 100% | Subject_2 |
Alignments
AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000
Sequence ID: Subject_2 Length: 1045 Number of Matches: 1
Range 1: 2 to 18
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.9 bits(34) | 0.0 | 17/17(100%) | 0/17(0%) | Plus/Plus |
Query 4 GCGCGGTGTCATCTATG 20 ||||||||||||||||| Subject 2 GCGCGGTGTCATCTATG 18
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 7.011e-08 | 100% | Subject_3 |
Alignments
DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
Sequence ID: Subject_3 Length: 323 Number of Matches: 1
Range 1: 224 to 243
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Plus |
Query 1 CGCGCGCGGTGTCATCTATG 20 |||||||||||||||||||| Subject 224 CGCGCGCGGTGTCATCTATG 243
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 7.011e-08 | 100% | Subject_6 |
Alignments
AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
Sequence ID: Subject_6 Length: 2457 Number of Matches: 1
Range 1: 2143 to 2162
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Plus |
Query 1 CGCGCGCGGTGTCATCTATG 20 |||||||||||||||||||| Subject 2143 CGCGCGCGGTGTCATCTATG 2162
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (24 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (20 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 9.338e-08 | 92% | Subject_7 |
Alignments
AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
Sequence ID: Subject_7 Length: 4180 Number of Matches: 1
Range 1: 1541 to 1565
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 23/25(92%) | 0/25(0%) | Plus/Plus |
Query 1 ACATGAACAGCGCCTTGACCACAGC 25 |||||||||||||| ||||||| || Subject 1541 ACATGAACAGCGCCCTGACCACCGC 1565
Nucleotide Sequence (25 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
37.4 | 37.4 | 100% | 9.338e-08 | 92% | Subject_8 |
Alignments
EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
Sequence ID: Subject_8 Length: 4983 Number of Matches: 1
Range 1: 2344 to 2368
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.4 bits(40) | 0.0 | 23/25(92%) | 0/25(0%) | Plus/Plus |
Query 1 ACATGAACAGCGCCTTGACCACAGC 25 |||||||||||||| ||||||| || Subject 2344 ACATGAACAGCGCCCTGACCACCGC 2368
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
No Hits
Message: | No hits found |
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
89.7 | 89.7 | 100% | 6.629e-23 | 86% | Subject_7 |
Alignments
AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
Sequence ID: Subject_7 Length: 4180 Number of Matches: 1
Range 1: 1516 to 1589
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.7 bits(98) | 0.0 | 64/74(86%) | 0/74(0%) | Plus/Plus |
Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | Subject 1516 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 1575
Query 61 TTCGCAGTCCAGAA 74 ||||| |||||||| Subject 1576 TTCGCCGTCCAGAA 1589
Nucleotide Sequence (74 letters)
Query ID: | Query_1 |
Query definition: | Forward_Primer|NOST-Spec_(Genetic_ID) |
Query length: | 20 |
Program: | BLASTN 2.2.29+ |
Database: |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
89.7 | 89.7 | 100% | 6.629e-23 | 86% | Subject_8 |
Alignments
EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
Sequence ID: Subject_8 Length: 4983 Number of Matches: 1
Range 1: 2319 to 2392
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.7 bits(98) | 0.0 | 64/74(86%) | 0/74(0%) | Plus/Plus |
Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | Subject 2319 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 2378
Query 61 TTCGCAGTCCAGAA 74 ||||| |||||||| Subject 2379 TTCGCCGTCCAGAA 2392