Nucleotide Sequence (16 letters)

Query ID:	106397
Query definition:	No definition line
Query length:	16
Program:	BLASTN 2.2.29+
Database:	pdb

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40

40–50

50–80

80–200

200≤

query:

Descriptions

Sequences producing significant alignments:

Description	Max score	Total score	Query cover	E value	Ident	Accession
Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5K_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5I_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5G_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5E_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5C_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J5A_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J58_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J56_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J54_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J52_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J51_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J50_A
Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)	32.2	77.3	100%	0.0007913	100%	3J4X_A
Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome	32.2	62.9	100%	0.0007913	100%	3J37_A
Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon.	32.2	62.9	100%	0.0007913	100%	3IZT_B
Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit.	32.2	77.3	100%	0.0007913	100%	3FIK_B
Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State	32.2	77.3	100%	0.0007913	100%	3E1B_B
Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143	32.2	77.3	100%	0.0007913	100%	2GYC_0
Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056	32.2	77.3	100%	0.0007913	100%	2GYA_0
Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.	32.2	77.3	100%	0.0007913	100%	2I2V_B
Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.	32.2	77.3	100%	0.0007913	100%	2AW4_B
Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.	32.2	77.3	100%	0.0007913	100%	2AWB_B
Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.	32.2	77.3	100%	0.0007913	100%	1VS6_B
Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome	32.2	77.3	100%	0.0007913	100%	1P85_0
Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution	26.3	40.6	81%	0.04882	100%	1C2W_B
Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)	18.3	36.7	81%	11.9	92%	3J44_1
Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)	18.3	36.7	81%	11.9	92%	3J2L_1
Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome	18.3	77.8	88%	11.9	100%	3J62_AA
Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome	18.3	18.3	56%	11.9	100%	4CE4_A
Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex	18.3	79.8	81%	11.9	100%	4BYP_5
Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex	18.3	79.8	81%	11.9	100%	4BYW_5
Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins	18.3	51.0	75%	11.9	100%	4HUB_0
Chain 5, Structure Of The H. Sapiens 60s Rrna	18.3	128.8	100%	11.9	100%	3J3F_5
Chain 5, Structure Of The D. Melanogaster 60s Rrna	18.3	63.4	100%	11.9	100%	3J3E_5
Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome	18.3	32.7	81%	11.9	100%	3ZEX_B
Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit	18.3	32.7	56%	11.9	100%	3OW2_0
Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6	18.3	51.0	75%	11.9	100%	4ADX_0
Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B	18.3	47.1	88%	11.9	100%	3U5F_6
Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A	18.3	47.1	88%	11.9	100%	3U5B_2
Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4.	18.3	51.0	75%	11.9	100%	4A1D_1
Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1	18.3	51.0	75%	11.9	100%	4A18_1
Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3.	18.3	51.0	75%	11.9	100%	4A1B_1
Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1	18.3	18.3	56%	11.9	100%	3J0L_8
Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2	18.3	18.3	56%	11.9	100%	3J0O_8
Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit.	18.3	79.8	81%	11.9	100%	3O58_1
Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit.	18.3	79.8	81%	11.9	100%	3O5H_1
Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit.	18.3	47.1	88%	11.9	100%	3O2Z_1
Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit.	18.3	47.1	88%	11.9	100%	3O30_1
Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)	18.3	79.8	81%	11.9	100%	3IZF_A
Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome	18.3	47.1	88%	11.9	100%	3IZE_A
Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)	18.3	18.3	56%	11.9	100%	3KO2_I
Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)	18.3	18.3	56%	11.9	100%	3KO2_H
Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)	18.3	18.3	56%	11.9	100%	3KO2_D
Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)	18.3	18.3	56%	11.9	100%	3KO2_C
Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit	18.3	51.0	75%	11.9	100%	3I56_0
Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution	18.3	79.8	81%	11.9	100%	3JYX_5
Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution	18.3	47.1	88%	11.9	100%	3JYV_A
Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h.	18.3	32.7	56%	11.9	100%	1S1I_3
Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit	18.3	32.7	56%	11.9	100%	2QEX_0
Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui	18.3	32.7	56%	11.9	100%	3CPW_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a	18.3	51.0	75%	11.9	100%	3CCV_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c	18.3	51.0	75%	11.9	100%	3CCU_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a	18.3	51.0	75%	11.9	100%	3CCS_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model.	18.3	51.0	75%	11.9	100%	3CCR_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u	18.3	51.0	75%	11.9	100%	3CCQ_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u	18.3	36.7	75%	11.9	100%	3CCM_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model.	18.3	51.0	75%	11.9	100%	3CCL_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u	18.3	51.0	75%	11.9	100%	3CCJ_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a	18.3	51.0	75%	11.9	100%	3CCE_0
Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u	18.3	51.0	75%	11.9	100%	3CC7_0
Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins	18.3	51.0	75%	11.9	100%	3CC2_0
Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map	18.3	63.4	81%	11.9	100%	2ZKR_0
Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit	18.3	32.7	56%	11.9	100%	2QA4_0
Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome	18.3	18.3	56%	11.9	100%	2FTC_R
Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution	18.3	32.7	56%	11.9	100%	1S72_0
Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui	18.3	51.0	75%	11.9	100%	1YIT_0
Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui	18.3	51.0	75%	11.9	100%	1YHQ_0
Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui	18.3	51.0	75%	11.9	100%	1YJW_0
Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit.	18.3	32.7	56%	11.9	100%	1Q86_A
Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution	18.3	32.7	56%	11.9	100%	1JJ2_0
Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit	18.3	32.7	56%	11.9	100%	1KC8_A
Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution	18.3	32.7	56%	11.9	100%	1FFK_0
Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound	18.3	32.7	56%	11.9	100%	1FG0_A
Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin	18.3	32.7	56%	11.9	100%	1FFZ_A
Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate	16.4	16.4	50%	47.03	100%	4LGT_F
Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate	16.4	16.4	50%	47.03	100%	4LGT_E
Chain A, Thermus Thermophilus Ribosome	16.4	32.7	69%	47.03	100%	4BTD_A
Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome.	16.4	32.7	69%	47.03	100%	4L6J_A
Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit	16.4	32.7	69%	47.03	100%	4KFI_A
Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine	16.4	32.7	69%	47.03	100%	4K0Q_A
Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine	16.4	32.7	69%	47.03	100%	4K0M_A
Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)	16.4	73.8	88%	47.03	100%	3J3V_A
Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)	16.4	73.8	88%	47.03	100%	3J3W_A
Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit	16.4	32.7	69%	47.03	100%	3V6X_A
Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit	16.4	32.7	69%	47.03	100%	3V6W_A
Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object	16.4	16.4	50%	47.03	100%	2YMI_DD
Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object	16.4	30.7	56%	47.03	100%	2YMF_A
Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I.	16.4	32.7	69%	47.03	100%	2J01_A
Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium	16.4	16.4	50%	47.03	100%	4AQX_C
Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium	16.4	16.4	50%	47.03	100%	4AQU_C

Alignments

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)

Sequence ID: gi|557804730|pdb|3J5K|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)

Sequence ID: gi|557804675|pdb|3J5I|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)

Sequence ID: gi|557804619|pdb|3J5G|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)

Sequence ID: gi|557804563|pdb|3J5E|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)

Sequence ID: gi|557804507|pdb|3J5C|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)

Sequence ID: gi|557804451|pdb|3J5A|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)

Sequence ID: gi|557804395|pdb|3J58|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)

Sequence ID: gi|557804339|pdb|3J56|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)

Sequence ID: gi|557804283|pdb|3J54|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)

Sequence ID: gi|557804227|pdb|3J52|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)

Sequence ID: gi|557804195|pdb|3J51|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)

Sequence ID: gi|557804163|pdb|3J50|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)

Sequence ID: gi|557804083|pdb|3J4X|A Length: 2903 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome

Sequence ID: gi|474452808|pdb|3J37|A Length: 2904 Number of Matches: 3

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Descriptions

Gene Bank

Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon.

Sequence ID: gi|326634210|pdb|3IZT|B Length: 2904 Number of Matches: 3

See 7 more title(s)

Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon

Sequence ID: gi|326634243|pdb|3IZU|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class2 Of The Six Classes)

Sequence ID: gi|380763703|pdb|3J0T|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4a Of The Six Classes)

Sequence ID: gi|380763785|pdb|3J0W|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4b Of The Six Classes)

Sequence ID: gi|380763843|pdb|3J0Y|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 3 Of The Six Classes)

Sequence ID: gi|380763925|pdb|3J11|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 5 Of The Six Classes)

Sequence ID: gi|380763959|pdb|3J12|B

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 6 Of The Six Classes)

Sequence ID: gi|380764016|pdb|3J14|B

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Descriptions

Gene Bank

Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit.

Sequence ID: gi|224510767|pdb|3FIK|B Length: 2903 Number of Matches: 4

See 19 more title(s)

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097373|pdb|3I1N|A

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097425|pdb|3I1P|A

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097479|pdb|3I1R|A

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097533|pdb|3I1T|A

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097588|pdb|3I20|A

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

Sequence ID: gi|257097643|pdb|3I22|A

Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2).

Sequence ID: gi|294662251|pdb|2WWQ|B

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound.

Sequence ID: gi|309320065|pdb|3OFC|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin.

Sequence ID: gi|309320169|pdb|3OFZ|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

Sequence ID: gi|309320200|pdb|3OG0|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

Sequence ID: gi|315113654|pdb|3OAS|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound.

Sequence ID: gi|315113685|pdb|3OAT|A

Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding

Sequence ID: gi|334359437|pdb|3R8S|A

Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding

Sequence ID: gi|334359468|pdb|3R8T|A

Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome

Sequence ID: gi|371927526|pdb|3SGF|A

Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome (Without Viomycin)

Sequence ID: gi|371927651|pdb|3UOS|A

Chain A, Structure Of The Bacterial Ribosome Complexed By Tmrna-Smpb And Ef-G During Translocation And Mld-Loading (50s Subunit)

Sequence ID: gi|386783121|pdb|3J19|A

Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna Structure, 50s Subunit)

Sequence ID: gi|567754995|pdb|3J5U|A

Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna*ef-g Structure, 50s Subunit)

Sequence ID: gi|567755029|pdb|3J5W|A

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State

Sequence ID: gi|256032374|pdb|3E1B|B Length: 2903 Number of Matches: 4

See 1 more title(s)

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143

Sequence ID: gi|157883716|pdb|2GYC|0 Length: 2740 Number of Matches: 4

Range 1: 889 to 904

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    889  CGTCCGTCGTGAAGAG  904

Range 2: 2453 to 2460

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2453  CGTCGTGA  2460

Range 3: 776 to 782

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    776  TCGTGAA  782

Range 4: 1910 to 1916

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   1910  GTGAAGA  1916

Descriptions

Gene Bank

Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056

Sequence ID: gi|157883710|pdb|2GYA|0 Length: 2740 Number of Matches: 4

Range 1: 889 to 904

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    889  CGTCCGTCGTGAAGAG  904

Range 2: 2453 to 2460

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2453  CGTCGTGA  2460

Range 3: 776 to 782

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    776  TCGTGAA  782

Range 4: 1910 to 1916

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   1910  GTGAAGA  1916

Descriptions

Gene Bank

Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|122922257|pdb|2I2V|B Length: 2904 Number of Matches: 4

Range 1: 961 to 976

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

Query        1  CGTCCGTCGTGAAGAG  16
                ||||||||||||||||
Subject    961  CGTCCGTCGTGAAGAG  976

Range 2: 2591 to 2598

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

Query        5  CGTCGTGA  12
                ||||||||
Subject   2591  CGTCGTGA  2598

Range 3: 839 to 845

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        7  TCGTGAA  13
                |||||||
Subject    839  TCGTGAA  845

Range 4: 2027 to 2033

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

Query        9  GTGAAGA  15
                |||||||
Subject   2027  GTGAAGA  2033

Descriptions

Gene Bank

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|83754062|pdb|2AW4|B Length: 2904 Number of Matches: 4

See 38 more title(s)

Sequence ID: gi|122922241|pdb|2I2T|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|157836046|pdb|2QOV|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|157836098|pdb|2QOX|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|157836150|pdb|2QOZ|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|157836202|pdb|2QP1|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429721|pdb|2QAM|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429773|pdb|2QAO|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429831|pdb|2QBA|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429883|pdb|2QBC|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429935|pdb|2QBE|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158429988|pdb|2QBG|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158430041|pdb|2QBI|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158430094|pdb|2QBK|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158431394|pdb|2Z4L|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

Sequence ID: gi|158431447|pdb|2Z4N|B

Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4)

Sequence ID: gi|168988732|pdb|2VHM|B

Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4)

Sequence ID: gi|168988763|pdb|2VHN|B

Chain B, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound

Sequence ID: gi|169404603|pdb|2RDO|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|197107301|pdb|3DF2|B

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

Sequence ID: gi|197107353|pdb|3DF4|B

Chain 8, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4

Sequence ID: gi|290560329|pdb|3KCR|8

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101.

Sequence ID: gi|308198729|pdb|3ORB|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

Sequence ID: gi|308388007|pdb|3OFQ|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound.

Sequence ID: gi|308388038|pdb|3OFR|A

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome.

Sequence ID: gi|309320096|pdb|3OFD|A

Chain 8, Structure Of The Ribosome-Secye Complex In The Membrane Environment

Sequence ID: gi|329666014|pdb|3J01|8

Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics

Sequence ID: gi|402550607|pdb|4GAR|A

Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics

Sequence ID: gi|402550662|pdb|4GAU|A