Mercurial > repos > jankanis > blast2html
comparison blast2html.html.jinja @ 81:40ce2043006a
merge py2.6 branch
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Thu, 19 Jun 2014 17:00:29 +0200 |
| parents | 7d0d46168fd5 |
| children | 4378d11f0ed7 |
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| 72:6ecbfebb9dd9 | 81:40ce2043006a |
|---|---|
| 1 {# -*- coding: utf-8 -*- #} | |
| 1 <!DOCTYPE html> | 2 <!DOCTYPE html> |
| 2 <html> | 3 <html> |
| 3 <head> | 4 <head> |
| 4 <meta charset="UTF-8"> | 5 <meta charset="UTF-8"> |
| 5 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/"> | 6 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/"> |
| 464 <div class=scale> | 465 <div class=scale> |
| 465 <div>query:</div> | 466 <div>query:</div> |
| 466 <div class=graphicrow> | 467 <div class=graphicrow> |
| 467 <div> | 468 <div> |
| 468 {% for s in result|queryscale %} | 469 {% for s in result|queryscale %} |
| 469 <div class=graphicitem style="width: {{s.width}}%"> | 470 <div class=graphicitem style="width: {{s.width|numfmt}}%"> |
| 470 {% if s.width > 3.0 %} | 471 {% if s.width > 3.0 %} |
| 471 <div>{{s.label}}</div> | 472 <div>{{s.label}}</div> |
| 472 {% else %} | 473 {% else %} |
| 473 <div> </div> | 474 <div> </div> |
| 474 <div class=lastlabel>{{s.label}}</div> | 475 <div class=lastlabel>{{s.label}}</div> |
| 487 onmouseout='document.getElementById("defline{{result|nodeid}}").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | 488 onmouseout='document.getElementById("defline{{result|nodeid}}").innerHTML="Mouse-over to show defline and scores, click to show alignments"' |
| 488 title="{{line.defline}}"> | 489 title="{{line.defline}}"> |
| 489 <div class="matchrow graphicrow"> | 490 <div class="matchrow graphicrow"> |
| 490 {% for hit in line.colors %} | 491 {% for hit in line.colors %} |
| 491 <div class="matchitem graphicitem" | 492 <div class="matchitem graphicitem" |
| 492 style="background-color: {{hit[1]}}; width: {{hit[0]}}%"></div> | 493 style="background-color: {{hit[1]}}; width: {{hit[0]|numfmt}}%"></div> |
| 493 {% endfor %} | 494 {% endfor %} |
| 494 </div> | 495 </div> |
| 495 </a> | 496 </a> |
| 496 | 497 |
| 497 {% endfor %} | 498 {% endfor %} |
| 594 </tr> | 595 </tr> |
| 595 <tr> | 596 <tr> |
| 596 <td>{{hsp['Hsp_bit-score']|fmt('.1f')}} bits({{hsp.Hsp_score}})</td> | 597 <td>{{hsp['Hsp_bit-score']|fmt('.1f')}} bits({{hsp.Hsp_score}})</td> |
| 597 <td>{{hsp.Hsp_evalue|fmt('.1f')}}</td> | 598 <td>{{hsp.Hsp_evalue|fmt('.1f')}}</td> |
| 598 <td>{{ hsp.Hsp_identity }}/{{ hsp|len }}({{ | 599 <td>{{ hsp.Hsp_identity }}/{{ hsp|len }}({{ |
| 599 (hsp.Hsp_identity/hsp|len) |fmt('.0%') }})</td> | 600 ((hsp.Hsp_identity|float)/hsp|len) | fmt('.0%') }})</td> |
| 600 <td>{{ hsp.Hsp_gaps }}/{{ hsp|len | 601 <td>{{ hsp.Hsp_gaps }}/{{ hsp|len |
| 601 }}({{ (hsp.Hsp_gaps / hsp|len) | fmt('.0%') }})</td> | 602 }}({{ ((hsp.Hsp_gaps|float) / hsp|len) | fmt('.0%') }})</td> |
| 602 <td>{{ hsp['Hsp_query-frame']|asframe }}/{{ hsp['Hsp_hit-frame']|asframe }}</td> | 603 <td>{{ hsp['Hsp_query-frame']|asframe }}/{{ hsp['Hsp_hit-frame']|asframe }}</td> |
| 603 </tr> | 604 </tr> |
| 604 </table> | 605 </table> |
| 605 | 606 |
| 606 {% for alignment_line in hsp|alignment_pre %} | 607 {% for alignment_line in hsp|alignment_pre %} |