comparison blast2html.py @ 119:591dc9c24824

tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering

118:7f3f8c10f44b

    return value

@filter
def hits(result):
    # sort hits by longest hotspot first
    return sorted(result.Iteration_hits.findall('Hit'),
                  key=lambda h: max(blastxml_len(hsp) for hsp in h.Hit_hsps.Hsp),
                  reverse=True)

@filter('params')
def result_params(iteration):
    return (('Query number', iteration['Iteration_iter-num']),
            ('Query ID', iteration['Iteration_query-ID']),

119:591dc9c24824

    return value

@filter
def hits(result):
    # Use findall so we get an empty list if there are no Hit elements at all
    return result.Iteration_hits.findall('Hit')

@filter('params')
def result_params(iteration):
    return (('Query number', iteration['Iteration_iter-num']),
            ('Query ID', iteration['Iteration_query-ID']),