Mercurial > repos > jankanis > blast2html
comparison test-data/blast xml example1.html @ 119:591dc9c24824
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Thu, 31 Jul 2014 13:26:34 +0200 |
| parents | 7f3f8c10f44b |
| children |
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| 118:7f3f8c10f44b | 119:591dc9c24824 |
|---|---|
| 755 style="background-color: transparent; width: 18.75%"></div> | 755 style="background-color: transparent; width: 18.75%"></div> |
| 756 </div> | 756 </div> |
| 757 </a> | 757 </a> |
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| 797 </div> | |
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| 803 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 804 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"> | |
| 805 <div class="matchrow graphicrow"> | |
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| 808 <div class="matchitem graphicitem" | |
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| 810 </div> | |
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| 762 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | 816 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' |
| 763 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"> | 817 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"> |
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| 831 <div class="matchrow graphicrow"> | |
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| 796 style="background-color: transparent; width: 6.25%"></div> | |
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| 802 onmouseover='document.getElementById("defline1").innerHTML="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"' | |
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| 804 title="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"> | |
| 805 <div class="matchrow graphicrow"> | |
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| 809 style="background-color: black; width: 56.25%"></div> | |
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| 813 <a class=matchresult | |
| 814 href="#hit1-28" | |
| 815 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"' | |
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| 817 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"> | |
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| 820 style="background-color: transparent; width: 18.75%"></div> | |
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| 822 style="background-color: black; width: 81.25%"></div> | |
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| 825 | |
| 826 <a class=matchresult | |
| 827 href="#hit1-29" | |
| 828 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"' | |
| 829 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 830 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"> | |
| 831 <div class="matchrow graphicrow"> | |
| 832 <div class="matchitem graphicitem" | |
| 833 style="background-color: transparent; width: 18.75%"></div> | |
| 834 <div class="matchitem graphicitem" | |
| 835 style="background-color: black; width: 81.25%"></div> | |
| 836 </div> | |
| 837 </a> | |
| 838 | |
| 839 <a class=matchresult | |
| 840 href="#hit1-31" | |
| 841 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"' | |
| 842 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 843 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"> | |
| 844 <div class="matchrow graphicrow"> | |
| 845 <div class="matchitem graphicitem" | |
| 846 style="background-color: transparent; width: 18.75%"></div> | |
| 847 <div class="matchitem graphicitem" | |
| 848 style="background-color: black; width: 75%"></div> | |
| 849 <div class="matchitem graphicitem" | |
| 850 style="background-color: transparent; width: 6.25%"></div> | |
| 851 </div> | |
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| 853 | |
| 854 <a class=matchresult | |
| 855 href="#hit1-32" | |
| 856 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The H. Sapiens 60s Rrna"' | |
| 857 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 858 title="Chain 5, Structure Of The H. Sapiens 60s Rrna"> | |
| 859 <div class="matchrow graphicrow"> | |
| 860 <div class="matchitem graphicitem" | |
| 861 style="background-color: black; width: 100%"></div> | |
| 862 </div> | |
| 863 </a> | |
| 864 | |
| 865 <a class=matchresult | |
| 866 href="#hit1-33" | |
| 867 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The D. Melanogaster 60s Rrna"' | |
| 868 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 869 title="Chain 5, Structure Of The D. Melanogaster 60s Rrna"> | |
| 870 <div class="matchrow graphicrow"> | |
| 871 <div class="matchitem graphicitem" | |
| 872 style="background-color: black; width: 100%"></div> | |
| 873 </div> | |
| 874 </a> | |
| 875 | |
| 876 <a class=matchresult | |
| 877 href="#hit1-34" | |
| 878 onmouseover='document.getElementById("defline1").innerHTML="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"' | |
| 879 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' | |
| 880 title="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"> | |
| 881 <div class="matchrow graphicrow"> | |
| 882 <div class="matchitem graphicitem" | |
| 883 style="background-color: transparent; width: 18.75%"></div> | |
| 884 <div class="matchitem graphicitem" | |
| 885 style="background-color: black; width: 81.25%"></div> | |
| 886 </div> | 886 </div> |
| 887 </a> | 887 </a> |
| 888 | 888 |
| 889 <a class=matchresult | 889 <a class=matchresult |
| 890 href="#hit1-36" | 890 href="#hit1-36" |
| 2181 <td>0.04882</td> | 2181 <td>0.04882</td> |
| 2182 <td>100%</td> | 2182 <td>100%</td> |
| 2183 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&log$=nuclalign">1C2W_B</a></td> | 2183 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&log$=nuclalign">1C2W_B</a></td> |
| 2184 </tr> | 2184 </tr> |
| 2185 <tr> | 2185 <tr> |
| 2186 <td><div><a href="#hit1-30" | |
| 2187 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)" | |
| 2188 id="description1-30"> | |
| 2189 Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit) | |
| 2190 </a></div></td> | |
| 2191 <td>18.3</td> | |
| 2192 <td>36.7</td> | |
| 2193 <td>81%</td> | |
| 2194 <td>11.9</td> | |
| 2195 <td>92%</td> | |
| 2196 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">3J44_1</a></td> | |
| 2197 </tr> | |
| 2198 <tr> | |
| 2199 <td><div><a href="#hit1-35" | |
| 2200 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)" | |
| 2201 id="description1-35"> | |
| 2202 Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna) | |
| 2203 </a></div></td> | |
| 2204 <td>18.3</td> | |
| 2205 <td>36.7</td> | |
| 2206 <td>81%</td> | |
| 2207 <td>11.9</td> | |
| 2208 <td>92%</td> | |
| 2209 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">3J2L_1</a></td> | |
| 2210 </tr> | |
| 2211 <tr> | |
| 2212 <td><div><a href="#hit1-26" | 2186 <td><div><a href="#hit1-26" |
| 2213 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome" | 2187 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome" |
| 2214 id="description1-26"> | 2188 id="description1-26"> |
| 2215 Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome | 2189 Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome |
| 2216 </a></div></td> | 2190 </a></div></td> |
| 2259 <td>11.9</td> | 2233 <td>11.9</td> |
| 2260 <td>100%</td> | 2234 <td>100%</td> |
| 2261 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">4BYW_5</a></td> | 2235 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">4BYW_5</a></td> |
| 2262 </tr> | 2236 </tr> |
| 2263 <tr> | 2237 <tr> |
| 2238 <td><div><a href="#hit1-30" | |
| 2239 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)" | |
| 2240 id="description1-30"> | |
| 2241 Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit) | |
| 2242 </a></div></td> | |
| 2243 <td>18.3</td> | |
| 2244 <td>36.7</td> | |
| 2245 <td>81%</td> | |
| 2246 <td>11.9</td> | |
| 2247 <td>92%</td> | |
| 2248 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">3J44_1</a></td> | |
| 2249 </tr> | |
| 2250 <tr> | |
| 2264 <td><div><a href="#hit1-31" | 2251 <td><div><a href="#hit1-31" |
| 2265 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins" | 2252 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins" |
| 2266 id="description1-31"> | 2253 id="description1-31"> |
| 2267 Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins | 2254 Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins |
| 2268 </a></div></td> | 2255 </a></div></td> |
| 2309 <td>32.7</td> | 2296 <td>32.7</td> |
| 2310 <td>81%</td> | 2297 <td>81%</td> |
| 2311 <td>11.9</td> | 2298 <td>11.9</td> |
| 2312 <td>100%</td> | 2299 <td>100%</td> |
| 2313 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">3ZEX_B</a></td> | 2300 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">3ZEX_B</a></td> |
| 2301 </tr> | |
| 2302 <tr> | |
| 2303 <td><div><a href="#hit1-35" | |
| 2304 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)" | |
| 2305 id="description1-35"> | |
| 2306 Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna) | |
| 2307 </a></div></td> | |
| 2308 <td>18.3</td> | |
| 2309 <td>36.7</td> | |
| 2310 <td>81%</td> | |
| 2311 <td>11.9</td> | |
| 2312 <td>92%</td> | |
| 2313 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">3J2L_1</a></td> | |
| 2314 </tr> | 2314 </tr> |
| 2315 <tr> | 2315 <tr> |
| 2316 <td><div><a href="#hit1-36" | 2316 <td><div><a href="#hit1-36" |
| 2317 title="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit" | 2317 title="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit" |
| 2318 id="description1-36"> | 2318 id="description1-36"> |
| 6264 Subject 839 TCGTGAA 845</pre> | 6264 Subject 839 TCGTGAA 845</pre> |
| 6265 </div> | 6265 </div> |
| 6266 | 6266 |
| 6267 </div> | 6267 </div> |
| 6268 | 6268 |
| 6269 <div class=alignment id=hit1-26> | |
| 6270 | |
| 6271 <div class=linkheader> | |
| 6272 <div class=right><a href="#description1-26">Descriptions</a></div> | |
| 6273 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6274 </div> | |
| 6275 | |
| 6276 <div class=title> | |
| 6277 <p class=hittitle>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</p> | |
| 6278 <p class=titleinfo> | |
| 6279 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">gi|582044940|pdb|3J62|AA</a> | |
| 6280 <span class=b>Length:</span> 3391 | |
| 6281 <span class=b>Number of Matches:</span> 5 | |
| 6282 </p> | |
| 6283 </div> | |
| 6284 | |
| 6285 | |
| 6286 <div class=hotspot id=hotspot1-26-1> | |
| 6287 <p class=range> | |
| 6288 <span class=range>Range 1: 2961 to 2969</span> | |
| 6289 </p> | |
| 6290 | |
| 6291 <table class=hotspotstable> | |
| 6292 <tr> | |
| 6293 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6294 </tr> | |
| 6295 <tr> | |
| 6296 <td>18.3341 bits (9)</td> | |
| 6297 <td>11.9013</td> | |
| 6298 <td>9/9 (100%)</td> | |
| 6299 <td>0/9 (0%)</td> | |
| 6300 <td>Plus/Plus</td> | |
| 6301 </tr> | |
| 6302 </table> | |
| 6303 | |
| 6304 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6305 ||||||||| | |
| 6306 Subject 2961 CCGTCGTGA 2969</pre> | |
| 6307 </div> | |
| 6308 <div class=hotspot id=hotspot1-26-2> | |
| 6309 <p class=range> | |
| 6310 <span class=range>Range 2: 177 to 170</span> | |
| 6311 </p> | |
| 6312 | |
| 6313 <table class=hotspotstable> | |
| 6314 <tr> | |
| 6315 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6316 </tr> | |
| 6317 <tr> | |
| 6318 <td>16.3517 bits (8)</td> | |
| 6319 <td>47.0266</td> | |
| 6320 <td>8/8 (100%)</td> | |
| 6321 <td>0/8 (0%)</td> | |
| 6322 <td>Plus/Minus</td> | |
| 6323 </tr> | |
| 6324 </table> | |
| 6325 | |
| 6326 <pre class=alignmentgraphic>Query 2 GTCCGTCG 9 | |
| 6327 |||||||| | |
| 6328 Subject 177 GTCCGTCG 170</pre> | |
| 6329 </div> | |
| 6330 <div class=hotspot id=hotspot1-26-3> | |
| 6331 <p class=range> | |
| 6332 <span class=range>Range 3: 553 to 559</span> | |
| 6333 </p> | |
| 6334 | |
| 6335 <table class=hotspotstable> | |
| 6336 <tr> | |
| 6337 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6338 </tr> | |
| 6339 <tr> | |
| 6340 <td>14.3694 bits (7)</td> | |
| 6341 <td>185.82</td> | |
| 6342 <td>7/7 (100%)</td> | |
| 6343 <td>0/7 (0%)</td> | |
| 6344 <td>Plus/Plus</td> | |
| 6345 </tr> | |
| 6346 </table> | |
| 6347 | |
| 6348 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 6349 ||||||| | |
| 6350 Subject 553 CCGTCGT 559</pre> | |
| 6351 </div> | |
| 6352 <div class=hotspot id=hotspot1-26-4> | |
| 6353 <p class=range> | |
| 6354 <span class=range>Range 4: 2048 to 2042</span> | |
| 6355 </p> | |
| 6356 | |
| 6357 <table class=hotspotstable> | |
| 6358 <tr> | |
| 6359 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6360 </tr> | |
| 6361 <tr> | |
| 6362 <td>14.3694 bits (7)</td> | |
| 6363 <td>185.82</td> | |
| 6364 <td>7/7 (100%)</td> | |
| 6365 <td>0/7 (0%)</td> | |
| 6366 <td>Plus/Minus</td> | |
| 6367 </tr> | |
| 6368 </table> | |
| 6369 | |
| 6370 <pre class=alignmentgraphic>Query 2 GTCCGTC 8 | |
| 6371 ||||||| | |
| 6372 Subject 2048 GTCCGTC 2042</pre> | |
| 6373 </div> | |
| 6374 <div class=hotspot id=hotspot1-26-5> | |
| 6375 <p class=range> | |
| 6376 <span class=range>Range 5: 2211 to 2217</span> | |
| 6377 </p> | |
| 6378 | |
| 6379 <table class=hotspotstable> | |
| 6380 <tr> | |
| 6381 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6382 </tr> | |
| 6383 <tr> | |
| 6384 <td>14.3694 bits (7)</td> | |
| 6385 <td>185.82</td> | |
| 6386 <td>7/7 (100%)</td> | |
| 6387 <td>0/7 (0%)</td> | |
| 6388 <td>Plus/Plus</td> | |
| 6389 </tr> | |
| 6390 </table> | |
| 6391 | |
| 6392 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6393 ||||||| | |
| 6394 Subject 2211 GTGAAGA 2217</pre> | |
| 6395 </div> | |
| 6396 | |
| 6397 </div> | |
| 6398 | |
| 6399 <div class=alignment id=hit1-27> | |
| 6400 | |
| 6401 <div class=linkheader> | |
| 6402 <div class=right><a href="#description1-27">Descriptions</a></div> | |
| 6403 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6404 </div> | |
| 6405 | |
| 6406 <div class=title> | |
| 6407 <p class=hittitle>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</p> | |
| 6408 <p class=titleinfo> | |
| 6409 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">gi|567755268|pdb|4CE4|A</a> | |
| 6410 <span class=b>Length:</span> 1570 | |
| 6411 <span class=b>Number of Matches:</span> 1 | |
| 6412 </p> | |
| 6413 </div> | |
| 6414 | |
| 6415 | |
| 6416 <div class=hotspot id=hotspot1-27-1> | |
| 6417 <p class=range> | |
| 6418 <span class=range>Range 1: 1020 to 1028</span> | |
| 6419 </p> | |
| 6420 | |
| 6421 <table class=hotspotstable> | |
| 6422 <tr> | |
| 6423 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6424 </tr> | |
| 6425 <tr> | |
| 6426 <td>18.3341 bits (9)</td> | |
| 6427 <td>11.9013</td> | |
| 6428 <td>9/9 (100%)</td> | |
| 6429 <td>0/9 (0%)</td> | |
| 6430 <td>Plus/Plus</td> | |
| 6431 </tr> | |
| 6432 </table> | |
| 6433 | |
| 6434 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16 | |
| 6435 ||||||||| | |
| 6436 Subject 1020 CGTGAAGAG 1028</pre> | |
| 6437 </div> | |
| 6438 | |
| 6439 </div> | |
| 6440 | |
| 6441 <div class=alignment id=hit1-28> | |
| 6442 | |
| 6443 <div class=linkheader> | |
| 6444 <div class=right><a href="#description1-28">Descriptions</a></div> | |
| 6445 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6446 </div> | |
| 6447 | |
| 6448 <div class=title> | |
| 6449 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6450 <p class=titleinfo> | |
| 6451 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">gi|558704783|pdb|4BYP|5</a> | |
| 6452 <span class=b>Length:</span> 3396 | |
| 6453 <span class=b>Number of Matches:</span> 5 | |
| 6454 </p> | |
| 6455 </div> | |
| 6456 | |
| 6457 | |
| 6458 <div class=hotspot id=hotspot1-28-1> | |
| 6459 <p class=range> | |
| 6460 <span class=range>Range 1: 2959 to 2967</span> | |
| 6461 </p> | |
| 6462 | |
| 6463 <table class=hotspotstable> | |
| 6464 <tr> | |
| 6465 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6466 </tr> | |
| 6467 <tr> | |
| 6468 <td>18.3341 bits (9)</td> | |
| 6469 <td>11.9013</td> | |
| 6470 <td>9/9 (100%)</td> | |
| 6471 <td>0/9 (0%)</td> | |
| 6472 <td>Plus/Plus</td> | |
| 6473 </tr> | |
| 6474 </table> | |
| 6475 | |
| 6476 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6477 ||||||||| | |
| 6478 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6479 </div> | |
| 6480 <div class=hotspot id=hotspot1-28-2> | |
| 6481 <p class=range> | |
| 6482 <span class=range>Range 2: 1634 to 1627</span> | |
| 6483 </p> | |
| 6484 | |
| 6485 <table class=hotspotstable> | |
| 6486 <tr> | |
| 6487 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6488 </tr> | |
| 6489 <tr> | |
| 6490 <td>16.3517 bits (8)</td> | |
| 6491 <td>47.0266</td> | |
| 6492 <td>8/8 (100%)</td> | |
| 6493 <td>0/8 (0%)</td> | |
| 6494 <td>Plus/Minus</td> | |
| 6495 </tr> | |
| 6496 </table> | |
| 6497 | |
| 6498 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6499 |||||||| | |
| 6500 Subject 1634 CGTGAAGA 1627</pre> | |
| 6501 </div> | |
| 6502 <div class=hotspot id=hotspot1-28-3> | |
| 6503 <p class=range> | |
| 6504 <span class=range>Range 3: 2435 to 2442</span> | |
| 6505 </p> | |
| 6506 | |
| 6507 <table class=hotspotstable> | |
| 6508 <tr> | |
| 6509 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6510 </tr> | |
| 6511 <tr> | |
| 6512 <td>16.3517 bits (8)</td> | |
| 6513 <td>47.0266</td> | |
| 6514 <td>8/8 (100%)</td> | |
| 6515 <td>0/8 (0%)</td> | |
| 6516 <td>Plus/Plus</td> | |
| 6517 </tr> | |
| 6518 </table> | |
| 6519 | |
| 6520 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6521 |||||||| | |
| 6522 Subject 2435 GTGAAGAG 2442</pre> | |
| 6523 </div> | |
| 6524 <div class=hotspot id=hotspot1-28-4> | |
| 6525 <p class=range> | |
| 6526 <span class=range>Range 4: 1100 to 1106</span> | |
| 6527 </p> | |
| 6528 | |
| 6529 <table class=hotspotstable> | |
| 6530 <tr> | |
| 6531 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6532 </tr> | |
| 6533 <tr> | |
| 6534 <td>14.3694 bits (7)</td> | |
| 6535 <td>185.82</td> | |
| 6536 <td>7/7 (100%)</td> | |
| 6537 <td>0/7 (0%)</td> | |
| 6538 <td>Plus/Plus</td> | |
| 6539 </tr> | |
| 6540 </table> | |
| 6541 | |
| 6542 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6543 ||||||| | |
| 6544 Subject 1100 TGAAGAG 1106</pre> | |
| 6545 </div> | |
| 6546 <div class=hotspot id=hotspot1-28-5> | |
| 6547 <p class=range> | |
| 6548 <span class=range>Range 5: 2216 to 2222</span> | |
| 6549 </p> | |
| 6550 | |
| 6551 <table class=hotspotstable> | |
| 6552 <tr> | |
| 6553 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6554 </tr> | |
| 6555 <tr> | |
| 6556 <td>14.3694 bits (7)</td> | |
| 6557 <td>185.82</td> | |
| 6558 <td>7/7 (100%)</td> | |
| 6559 <td>0/7 (0%)</td> | |
| 6560 <td>Plus/Plus</td> | |
| 6561 </tr> | |
| 6562 </table> | |
| 6563 | |
| 6564 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6565 ||||||| | |
| 6566 Subject 2216 GTGAAGA 2222</pre> | |
| 6567 </div> | |
| 6568 | |
| 6569 </div> | |
| 6570 | |
| 6571 <div class=alignment id=hit1-29> | |
| 6572 | |
| 6573 <div class=linkheader> | |
| 6574 <div class=right><a href="#description1-29">Descriptions</a></div> | |
| 6575 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6576 </div> | |
| 6577 | |
| 6578 <div class=title> | |
| 6579 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6580 <p class=titleinfo> | |
| 6581 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">gi|558704825|pdb|4BYW|5</a> | |
| 6582 <span class=b>Length:</span> 3396 | |
| 6583 <span class=b>Number of Matches:</span> 5 | |
| 6584 </p> | |
| 6585 </div> | |
| 6586 | |
| 6587 | |
| 6588 <div class=hotspot id=hotspot1-29-1> | |
| 6589 <p class=range> | |
| 6590 <span class=range>Range 1: 2959 to 2967</span> | |
| 6591 </p> | |
| 6592 | |
| 6593 <table class=hotspotstable> | |
| 6594 <tr> | |
| 6595 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6596 </tr> | |
| 6597 <tr> | |
| 6598 <td>18.3341 bits (9)</td> | |
| 6599 <td>11.9013</td> | |
| 6600 <td>9/9 (100%)</td> | |
| 6601 <td>0/9 (0%)</td> | |
| 6602 <td>Plus/Plus</td> | |
| 6603 </tr> | |
| 6604 </table> | |
| 6605 | |
| 6606 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6607 ||||||||| | |
| 6608 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6609 </div> | |
| 6610 <div class=hotspot id=hotspot1-29-2> | |
| 6611 <p class=range> | |
| 6612 <span class=range>Range 2: 1634 to 1627</span> | |
| 6613 </p> | |
| 6614 | |
| 6615 <table class=hotspotstable> | |
| 6616 <tr> | |
| 6617 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6618 </tr> | |
| 6619 <tr> | |
| 6620 <td>16.3517 bits (8)</td> | |
| 6621 <td>47.0266</td> | |
| 6622 <td>8/8 (100%)</td> | |
| 6623 <td>0/8 (0%)</td> | |
| 6624 <td>Plus/Minus</td> | |
| 6625 </tr> | |
| 6626 </table> | |
| 6627 | |
| 6628 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6629 |||||||| | |
| 6630 Subject 1634 CGTGAAGA 1627</pre> | |
| 6631 </div> | |
| 6632 <div class=hotspot id=hotspot1-29-3> | |
| 6633 <p class=range> | |
| 6634 <span class=range>Range 3: 2435 to 2442</span> | |
| 6635 </p> | |
| 6636 | |
| 6637 <table class=hotspotstable> | |
| 6638 <tr> | |
| 6639 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6640 </tr> | |
| 6641 <tr> | |
| 6642 <td>16.3517 bits (8)</td> | |
| 6643 <td>47.0266</td> | |
| 6644 <td>8/8 (100%)</td> | |
| 6645 <td>0/8 (0%)</td> | |
| 6646 <td>Plus/Plus</td> | |
| 6647 </tr> | |
| 6648 </table> | |
| 6649 | |
| 6650 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6651 |||||||| | |
| 6652 Subject 2435 GTGAAGAG 2442</pre> | |
| 6653 </div> | |
| 6654 <div class=hotspot id=hotspot1-29-4> | |
| 6655 <p class=range> | |
| 6656 <span class=range>Range 4: 1100 to 1106</span> | |
| 6657 </p> | |
| 6658 | |
| 6659 <table class=hotspotstable> | |
| 6660 <tr> | |
| 6661 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6662 </tr> | |
| 6663 <tr> | |
| 6664 <td>14.3694 bits (7)</td> | |
| 6665 <td>185.82</td> | |
| 6666 <td>7/7 (100%)</td> | |
| 6667 <td>0/7 (0%)</td> | |
| 6668 <td>Plus/Plus</td> | |
| 6669 </tr> | |
| 6670 </table> | |
| 6671 | |
| 6672 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6673 ||||||| | |
| 6674 Subject 1100 TGAAGAG 1106</pre> | |
| 6675 </div> | |
| 6676 <div class=hotspot id=hotspot1-29-5> | |
| 6677 <p class=range> | |
| 6678 <span class=range>Range 5: 2216 to 2222</span> | |
| 6679 </p> | |
| 6680 | |
| 6681 <table class=hotspotstable> | |
| 6682 <tr> | |
| 6683 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6684 </tr> | |
| 6685 <tr> | |
| 6686 <td>14.3694 bits (7)</td> | |
| 6687 <td>185.82</td> | |
| 6688 <td>7/7 (100%)</td> | |
| 6689 <td>0/7 (0%)</td> | |
| 6690 <td>Plus/Plus</td> | |
| 6691 </tr> | |
| 6692 </table> | |
| 6693 | |
| 6694 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6695 ||||||| | |
| 6696 Subject 2216 GTGAAGA 2222</pre> | |
| 6697 </div> | |
| 6698 | |
| 6699 </div> | |
| 6700 | |
| 6269 <div class=alignment id=hit1-30> | 6701 <div class=alignment id=hit1-30> |
| 6270 | 6702 |
| 6271 <div class=linkheader> | 6703 <div class=linkheader> |
| 6272 <div class=right><a href="#description1-30">Descriptions</a></div> | 6704 <div class=right><a href="#description1-30">Descriptions</a></div> |
| 6273 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">Gene Bank</a> | 6705 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 6328 Subject 2705 CCGTCGTGA 2713</pre> | 6760 Subject 2705 CCGTCGTGA 2713</pre> |
| 6329 </div> | 6761 </div> |
| 6330 | 6762 |
| 6331 </div> | 6763 </div> |
| 6332 | 6764 |
| 6765 <div class=alignment id=hit1-31> | |
| 6766 | |
| 6767 <div class=linkheader> | |
| 6768 <div class=right><a href="#description1-31">Descriptions</a></div> | |
| 6769 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6770 </div> | |
| 6771 | |
| 6772 <div class=title> | |
| 6773 <p class=hittitle>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</p> | |
| 6774 <p class=titleinfo> | |
| 6775 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">gi|508123724|pdb|4HUB|0</a> | |
| 6776 <span class=b>Length:</span> 2910 | |
| 6777 <span class=b>Number of Matches:</span> 3 | |
| 6778 </p> | |
| 6779 </div> | |
| 6780 | |
| 6781 | |
| 6782 <div class=hotspot id=hotspot1-31-1> | |
| 6783 <p class=range> | |
| 6784 <span class=range>Range 1: 298 to 290</span> | |
| 6785 </p> | |
| 6786 | |
| 6787 <table class=hotspotstable> | |
| 6788 <tr> | |
| 6789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6790 </tr> | |
| 6791 <tr> | |
| 6792 <td>18.3341 bits (9)</td> | |
| 6793 <td>11.9013</td> | |
| 6794 <td>9/9 (100%)</td> | |
| 6795 <td>0/9 (0%)</td> | |
| 6796 <td>Plus/Minus</td> | |
| 6797 </tr> | |
| 6798 </table> | |
| 6799 | |
| 6800 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 6801 ||||||||| | |
| 6802 Subject 298 TCGTGAAGA 290</pre> | |
| 6803 </div> | |
| 6804 <div class=hotspot id=hotspot1-31-2> | |
| 6805 <p class=range> | |
| 6806 <span class=range>Range 2: 2618 to 2626</span> | |
| 6807 </p> | |
| 6808 | |
| 6809 <table class=hotspotstable> | |
| 6810 <tr> | |
| 6811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6812 </tr> | |
| 6813 <tr> | |
| 6814 <td>18.3341 bits (9)</td> | |
| 6815 <td>11.9013</td> | |
| 6816 <td>9/9 (100%)</td> | |
| 6817 <td>0/9 (0%)</td> | |
| 6818 <td>Plus/Plus</td> | |
| 6819 </tr> | |
| 6820 </table> | |
| 6821 | |
| 6822 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6823 ||||||||| | |
| 6824 Subject 2618 CCGTCGTGA 2626</pre> | |
| 6825 </div> | |
| 6826 <div class=hotspot id=hotspot1-31-3> | |
| 6827 <p class=range> | |
| 6828 <span class=range>Range 3: 2599 to 2605</span> | |
| 6829 </p> | |
| 6830 | |
| 6831 <table class=hotspotstable> | |
| 6832 <tr> | |
| 6833 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6834 </tr> | |
| 6835 <tr> | |
| 6836 <td>14.3694 bits (7)</td> | |
| 6837 <td>185.82</td> | |
| 6838 <td>7/7 (100%)</td> | |
| 6839 <td>0/7 (0%)</td> | |
| 6840 <td>Plus/Plus</td> | |
| 6841 </tr> | |
| 6842 </table> | |
| 6843 | |
| 6844 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 6845 ||||||| | |
| 6846 Subject 2599 GTCGTGA 2605</pre> | |
| 6847 </div> | |
| 6848 | |
| 6849 </div> | |
| 6850 | |
| 6851 <div class=alignment id=hit1-32> | |
| 6852 | |
| 6853 <div class=linkheader> | |
| 6854 <div class=right><a href="#description1-32">Descriptions</a></div> | |
| 6855 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6856 </div> | |
| 6857 | |
| 6858 <div class=title> | |
| 6859 <p class=hittitle>Chain 5, Structure Of The H. Sapiens 60s Rrna</p> | |
| 6860 <p class=titleinfo> | |
| 6861 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">gi|485601478|pdb|3J3F|5</a> | |
| 6862 <span class=b>Length:</span> 5070 | |
| 6863 <span class=b>Number of Matches:</span> 8 | |
| 6864 </p> | |
| 6865 </div> | |
| 6866 | |
| 6867 | |
| 6868 <div class=hotspot id=hotspot1-32-1> | |
| 6869 <p class=range> | |
| 6870 <span class=range>Range 1: 4536 to 4544</span> | |
| 6871 </p> | |
| 6872 | |
| 6873 <table class=hotspotstable> | |
| 6874 <tr> | |
| 6875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6876 </tr> | |
| 6877 <tr> | |
| 6878 <td>18.3341 bits (9)</td> | |
| 6879 <td>11.9013</td> | |
| 6880 <td>9/9 (100%)</td> | |
| 6881 <td>0/9 (0%)</td> | |
| 6882 <td>Plus/Plus</td> | |
| 6883 </tr> | |
| 6884 </table> | |
| 6885 | |
| 6886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6887 ||||||||| | |
| 6888 Subject 4536 CCGTCGTGA 4544</pre> | |
| 6889 </div> | |
| 6890 <div class=hotspot id=hotspot1-32-2> | |
| 6891 <p class=range> | |
| 6892 <span class=range>Range 2: 765 to 772</span> | |
| 6893 </p> | |
| 6894 | |
| 6895 <table class=hotspotstable> | |
| 6896 <tr> | |
| 6897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6898 </tr> | |
| 6899 <tr> | |
| 6900 <td>16.3517 bits (8)</td> | |
| 6901 <td>47.0266</td> | |
| 6902 <td>8/8 (100%)</td> | |
| 6903 <td>0/8 (0%)</td> | |
| 6904 <td>Plus/Plus</td> | |
| 6905 </tr> | |
| 6906 </table> | |
| 6907 | |
| 6908 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6909 |||||||| | |
| 6910 Subject 765 CGTCCGTC 772</pre> | |
| 6911 </div> | |
| 6912 <div class=hotspot id=hotspot1-32-3> | |
| 6913 <p class=range> | |
| 6914 <span class=range>Range 3: 769 to 776</span> | |
| 6915 </p> | |
| 6916 | |
| 6917 <table class=hotspotstable> | |
| 6918 <tr> | |
| 6919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6920 </tr> | |
| 6921 <tr> | |
| 6922 <td>16.3517 bits (8)</td> | |
| 6923 <td>47.0266</td> | |
| 6924 <td>8/8 (100%)</td> | |
| 6925 <td>0/8 (0%)</td> | |
| 6926 <td>Plus/Plus</td> | |
| 6927 </tr> | |
| 6928 </table> | |
| 6929 | |
| 6930 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6931 |||||||| | |
| 6932 Subject 769 CGTCCGTC 776</pre> | |
| 6933 </div> | |
| 6934 <div class=hotspot id=hotspot1-32-4> | |
| 6935 <p class=range> | |
| 6936 <span class=range>Range 4: 773 to 780</span> | |
| 6937 </p> | |
| 6938 | |
| 6939 <table class=hotspotstable> | |
| 6940 <tr> | |
| 6941 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6942 </tr> | |
| 6943 <tr> | |
| 6944 <td>16.3517 bits (8)</td> | |
| 6945 <td>47.0266</td> | |
| 6946 <td>8/8 (100%)</td> | |
| 6947 <td>0/8 (0%)</td> | |
| 6948 <td>Plus/Plus</td> | |
| 6949 </tr> | |
| 6950 </table> | |
| 6951 | |
| 6952 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6953 |||||||| | |
| 6954 Subject 773 CGTCCGTC 780</pre> | |
| 6955 </div> | |
| 6956 <div class=hotspot id=hotspot1-32-5> | |
| 6957 <p class=range> | |
| 6958 <span class=range>Range 5: 777 to 784</span> | |
| 6959 </p> | |
| 6960 | |
| 6961 <table class=hotspotstable> | |
| 6962 <tr> | |
| 6963 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6964 </tr> | |
| 6965 <tr> | |
| 6966 <td>16.3517 bits (8)</td> | |
| 6967 <td>47.0266</td> | |
| 6968 <td>8/8 (100%)</td> | |
| 6969 <td>0/8 (0%)</td> | |
| 6970 <td>Plus/Plus</td> | |
| 6971 </tr> | |
| 6972 </table> | |
| 6973 | |
| 6974 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6975 |||||||| | |
| 6976 Subject 777 CGTCCGTC 784</pre> | |
| 6977 </div> | |
| 6978 <div class=hotspot id=hotspot1-32-6> | |
| 6979 <p class=range> | |
| 6980 <span class=range>Range 6: 3939 to 3946</span> | |
| 6981 </p> | |
| 6982 | |
| 6983 <table class=hotspotstable> | |
| 6984 <tr> | |
| 6985 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6986 </tr> | |
| 6987 <tr> | |
| 6988 <td>16.3517 bits (8)</td> | |
| 6989 <td>47.0266</td> | |
| 6990 <td>8/8 (100%)</td> | |
| 6991 <td>0/8 (0%)</td> | |
| 6992 <td>Plus/Plus</td> | |
| 6993 </tr> | |
| 6994 </table> | |
| 6995 | |
| 6996 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6997 |||||||| | |
| 6998 Subject 3939 GTGAAGAG 3946</pre> | |
| 6999 </div> | |
| 7000 <div class=hotspot id=hotspot1-32-7> | |
| 7001 <p class=range> | |
| 7002 <span class=range>Range 7: 393 to 399</span> | |
| 7003 </p> | |
| 7004 | |
| 7005 <table class=hotspotstable> | |
| 7006 <tr> | |
| 7007 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7008 </tr> | |
| 7009 <tr> | |
| 7010 <td>14.3694 bits (7)</td> | |
| 7011 <td>185.82</td> | |
| 7012 <td>7/7 (100%)</td> | |
| 7013 <td>0/7 (0%)</td> | |
| 7014 <td>Plus/Plus</td> | |
| 7015 </tr> | |
| 7016 </table> | |
| 7017 | |
| 7018 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7019 ||||||| | |
| 7020 Subject 393 TGAAGAG 399</pre> | |
| 7021 </div> | |
| 7022 <div class=hotspot id=hotspot1-32-8> | |
| 7023 <p class=range> | |
| 7024 <span class=range>Range 8: 3720 to 3726</span> | |
| 7025 </p> | |
| 7026 | |
| 7027 <table class=hotspotstable> | |
| 7028 <tr> | |
| 7029 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7030 </tr> | |
| 7031 <tr> | |
| 7032 <td>14.3694 bits (7)</td> | |
| 7033 <td>185.82</td> | |
| 7034 <td>7/7 (100%)</td> | |
| 7035 <td>0/7 (0%)</td> | |
| 7036 <td>Plus/Plus</td> | |
| 7037 </tr> | |
| 7038 </table> | |
| 7039 | |
| 7040 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7041 ||||||| | |
| 7042 Subject 3720 GTGAAGA 3726</pre> | |
| 7043 </div> | |
| 7044 | |
| 7045 </div> | |
| 7046 | |
| 7047 <div class=alignment id=hit1-33> | |
| 7048 | |
| 7049 <div class=linkheader> | |
| 7050 <div class=right><a href="#description1-33">Descriptions</a></div> | |
| 7051 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 7052 </div> | |
| 7053 | |
| 7054 <div class=title> | |
| 7055 <p class=hittitle>Chain 5, Structure Of The D. Melanogaster 60s Rrna</p> | |
| 7056 <p class=titleinfo> | |
| 7057 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">gi|485601474|pdb|3J3E|5</a> | |
| 7058 <span class=b>Length:</span> 3970 | |
| 7059 <span class=b>Number of Matches:</span> 4 | |
| 7060 </p> | |
| 7061 </div> | |
| 7062 | |
| 7063 | |
| 7064 <div class=hotspot id=hotspot1-33-1> | |
| 7065 <p class=range> | |
| 7066 <span class=range>Range 1: 3490 to 3498</span> | |
| 7067 </p> | |
| 7068 | |
| 7069 <table class=hotspotstable> | |
| 7070 <tr> | |
| 7071 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7072 </tr> | |
| 7073 <tr> | |
| 7074 <td>18.3341 bits (9)</td> | |
| 7075 <td>11.9013</td> | |
| 7076 <td>9/9 (100%)</td> | |
| 7077 <td>0/9 (0%)</td> | |
| 7078 <td>Plus/Plus</td> | |
| 7079 </tr> | |
| 7080 </table> | |
| 7081 | |
| 7082 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7083 ||||||||| | |
| 7084 Subject 3490 CCGTCGTGA 3498</pre> | |
| 7085 </div> | |
| 7086 <div class=hotspot id=hotspot1-33-2> | |
| 7087 <p class=range> | |
| 7088 <span class=range>Range 2: 2177 to 2184</span> | |
| 7089 </p> | |
| 7090 | |
| 7091 <table class=hotspotstable> | |
| 7092 <tr> | |
| 7093 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7094 </tr> | |
| 7095 <tr> | |
| 7096 <td>16.3517 bits (8)</td> | |
| 7097 <td>47.0266</td> | |
| 7098 <td>8/8 (100%)</td> | |
| 7099 <td>0/8 (0%)</td> | |
| 7100 <td>Plus/Plus</td> | |
| 7101 </tr> | |
| 7102 </table> | |
| 7103 | |
| 7104 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 7105 |||||||| | |
| 7106 Subject 2177 GTGAAGAG 2184</pre> | |
| 7107 </div> | |
| 7108 <div class=hotspot id=hotspot1-33-3> | |
| 7109 <p class=range> | |
| 7110 <span class=range>Range 3: 2594 to 2600</span> | |
| 7111 </p> | |
| 7112 | |
| 7113 <table class=hotspotstable> | |
| 7114 <tr> | |
| 7115 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7116 </tr> | |
| 7117 <tr> | |
| 7118 <td>14.3694 bits (7)</td> | |
| 7119 <td>185.82</td> | |
| 7120 <td>7/7 (100%)</td> | |
| 7121 <td>0/7 (0%)</td> | |
| 7122 <td>Plus/Plus</td> | |
| 7123 </tr> | |
| 7124 </table> | |
| 7125 | |
| 7126 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7127 ||||||| | |
| 7128 Subject 2594 GTGAAGA 2600</pre> | |
| 7129 </div> | |
| 7130 <div class=hotspot id=hotspot1-33-4> | |
| 7131 <p class=range> | |
| 7132 <span class=range>Range 4: 3627 to 3633</span> | |
| 7133 </p> | |
| 7134 | |
| 7135 <table class=hotspotstable> | |
| 7136 <tr> | |
| 7137 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7138 </tr> | |
| 7139 <tr> | |
| 7140 <td>14.3694 bits (7)</td> | |
| 7141 <td>185.82</td> | |
| 7142 <td>7/7 (100%)</td> | |
| 7143 <td>0/7 (0%)</td> | |
| 7144 <td>Plus/Plus</td> | |
| 7145 </tr> | |
| 7146 </table> | |
| 7147 | |
| 7148 <pre class=alignmentgraphic>Query 1 CGTCCGT 7 | |
| 7149 ||||||| | |
| 7150 Subject 3627 CGTCCGT 3633</pre> | |
| 7151 </div> | |
| 7152 | |
| 7153 </div> | |
| 7154 | |
| 7155 <div class=alignment id=hit1-34> | |
| 7156 | |
| 7157 <div class=linkheader> | |
| 7158 <div class=right><a href="#description1-34">Descriptions</a></div> | |
| 7159 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 7160 </div> | |
| 7161 | |
| 7162 <div class=title> | |
| 7163 <p class=hittitle>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</p> | |
| 7164 <p class=titleinfo> | |
| 7165 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">gi|449802187|pdb|3ZEX|B</a> | |
| 7166 <span class=b>Length:</span> 1465 | |
| 7167 <span class=b>Number of Matches:</span> 2 | |
| 7168 </p> | |
| 7169 </div> | |
| 7170 | |
| 7171 | |
| 7172 <div class=hotspot id=hotspot1-34-1> | |
| 7173 <p class=range> | |
| 7174 <span class=range>Range 1: 1334 to 1342</span> | |
| 7175 </p> | |
| 7176 | |
| 7177 <table class=hotspotstable> | |
| 7178 <tr> | |
| 7179 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7180 </tr> | |
| 7181 <tr> | |
| 7182 <td>18.3341 bits (9)</td> | |
| 7183 <td>11.9013</td> | |
| 7184 <td>9/9 (100%)</td> | |
| 7185 <td>0/9 (0%)</td> | |
| 7186 <td>Plus/Plus</td> | |
| 7187 </tr> | |
| 7188 </table> | |
| 7189 | |
| 7190 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7191 ||||||||| | |
| 7192 Subject 1334 CCGTCGTGA 1342</pre> | |
| 7193 </div> | |
| 7194 <div class=hotspot id=hotspot1-34-2> | |
| 7195 <p class=range> | |
| 7196 <span class=range>Range 2: 705 to 711</span> | |
| 7197 </p> | |
| 7198 | |
| 7199 <table class=hotspotstable> | |
| 7200 <tr> | |
| 7201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7202 </tr> | |
| 7203 <tr> | |
| 7204 <td>14.3694 bits (7)</td> | |
| 7205 <td>185.82</td> | |
| 7206 <td>7/7 (100%)</td> | |
| 7207 <td>0/7 (0%)</td> | |
| 7208 <td>Plus/Plus</td> | |
| 7209 </tr> | |
| 7210 </table> | |
| 7211 | |
| 7212 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7213 ||||||| | |
| 7214 Subject 705 TGAAGAG 711</pre> | |
| 7215 </div> | |
| 7216 | |
| 7217 </div> | |
| 7218 | |
| 6333 <div class=alignment id=hit1-35> | 7219 <div class=alignment id=hit1-35> |
| 6334 | 7220 |
| 6335 <div class=linkheader> | 7221 <div class=linkheader> |
| 6336 <div class=right><a href="#description1-35">Descriptions</a></div> | 7222 <div class=right><a href="#description1-35">Descriptions</a></div> |
| 6337 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">Gene Bank</a> | 7223 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&log$=nuclalign">Gene Bank</a> |
| 6392 Subject 2705 CCGTCGTGA 2713</pre> | 7278 Subject 2705 CCGTCGTGA 2713</pre> |
| 6393 </div> | 7279 </div> |
| 6394 | 7280 |
| 6395 </div> | 7281 </div> |
| 6396 | 7282 |
| 6397 <div class=alignment id=hit1-26> | |
| 6398 | |
| 6399 <div class=linkheader> | |
| 6400 <div class=right><a href="#description1-26">Descriptions</a></div> | |
| 6401 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6402 </div> | |
| 6403 | |
| 6404 <div class=title> | |
| 6405 <p class=hittitle>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</p> | |
| 6406 <p class=titleinfo> | |
| 6407 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&log$=nuclalign">gi|582044940|pdb|3J62|AA</a> | |
| 6408 <span class=b>Length:</span> 3391 | |
| 6409 <span class=b>Number of Matches:</span> 5 | |
| 6410 </p> | |
| 6411 </div> | |
| 6412 | |
| 6413 | |
| 6414 <div class=hotspot id=hotspot1-26-1> | |
| 6415 <p class=range> | |
| 6416 <span class=range>Range 1: 2961 to 2969</span> | |
| 6417 </p> | |
| 6418 | |
| 6419 <table class=hotspotstable> | |
| 6420 <tr> | |
| 6421 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6422 </tr> | |
| 6423 <tr> | |
| 6424 <td>18.3341 bits (9)</td> | |
| 6425 <td>11.9013</td> | |
| 6426 <td>9/9 (100%)</td> | |
| 6427 <td>0/9 (0%)</td> | |
| 6428 <td>Plus/Plus</td> | |
| 6429 </tr> | |
| 6430 </table> | |
| 6431 | |
| 6432 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6433 ||||||||| | |
| 6434 Subject 2961 CCGTCGTGA 2969</pre> | |
| 6435 </div> | |
| 6436 <div class=hotspot id=hotspot1-26-2> | |
| 6437 <p class=range> | |
| 6438 <span class=range>Range 2: 177 to 170</span> | |
| 6439 </p> | |
| 6440 | |
| 6441 <table class=hotspotstable> | |
| 6442 <tr> | |
| 6443 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6444 </tr> | |
| 6445 <tr> | |
| 6446 <td>16.3517 bits (8)</td> | |
| 6447 <td>47.0266</td> | |
| 6448 <td>8/8 (100%)</td> | |
| 6449 <td>0/8 (0%)</td> | |
| 6450 <td>Plus/Minus</td> | |
| 6451 </tr> | |
| 6452 </table> | |
| 6453 | |
| 6454 <pre class=alignmentgraphic>Query 2 GTCCGTCG 9 | |
| 6455 |||||||| | |
| 6456 Subject 177 GTCCGTCG 170</pre> | |
| 6457 </div> | |
| 6458 <div class=hotspot id=hotspot1-26-3> | |
| 6459 <p class=range> | |
| 6460 <span class=range>Range 3: 553 to 559</span> | |
| 6461 </p> | |
| 6462 | |
| 6463 <table class=hotspotstable> | |
| 6464 <tr> | |
| 6465 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6466 </tr> | |
| 6467 <tr> | |
| 6468 <td>14.3694 bits (7)</td> | |
| 6469 <td>185.82</td> | |
| 6470 <td>7/7 (100%)</td> | |
| 6471 <td>0/7 (0%)</td> | |
| 6472 <td>Plus/Plus</td> | |
| 6473 </tr> | |
| 6474 </table> | |
| 6475 | |
| 6476 <pre class=alignmentgraphic>Query 4 CCGTCGT 10 | |
| 6477 ||||||| | |
| 6478 Subject 553 CCGTCGT 559</pre> | |
| 6479 </div> | |
| 6480 <div class=hotspot id=hotspot1-26-4> | |
| 6481 <p class=range> | |
| 6482 <span class=range>Range 4: 2048 to 2042</span> | |
| 6483 </p> | |
| 6484 | |
| 6485 <table class=hotspotstable> | |
| 6486 <tr> | |
| 6487 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6488 </tr> | |
| 6489 <tr> | |
| 6490 <td>14.3694 bits (7)</td> | |
| 6491 <td>185.82</td> | |
| 6492 <td>7/7 (100%)</td> | |
| 6493 <td>0/7 (0%)</td> | |
| 6494 <td>Plus/Minus</td> | |
| 6495 </tr> | |
| 6496 </table> | |
| 6497 | |
| 6498 <pre class=alignmentgraphic>Query 2 GTCCGTC 8 | |
| 6499 ||||||| | |
| 6500 Subject 2048 GTCCGTC 2042</pre> | |
| 6501 </div> | |
| 6502 <div class=hotspot id=hotspot1-26-5> | |
| 6503 <p class=range> | |
| 6504 <span class=range>Range 5: 2211 to 2217</span> | |
| 6505 </p> | |
| 6506 | |
| 6507 <table class=hotspotstable> | |
| 6508 <tr> | |
| 6509 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6510 </tr> | |
| 6511 <tr> | |
| 6512 <td>14.3694 bits (7)</td> | |
| 6513 <td>185.82</td> | |
| 6514 <td>7/7 (100%)</td> | |
| 6515 <td>0/7 (0%)</td> | |
| 6516 <td>Plus/Plus</td> | |
| 6517 </tr> | |
| 6518 </table> | |
| 6519 | |
| 6520 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6521 ||||||| | |
| 6522 Subject 2211 GTGAAGA 2217</pre> | |
| 6523 </div> | |
| 6524 | |
| 6525 </div> | |
| 6526 | |
| 6527 <div class=alignment id=hit1-27> | |
| 6528 | |
| 6529 <div class=linkheader> | |
| 6530 <div class=right><a href="#description1-27">Descriptions</a></div> | |
| 6531 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6532 </div> | |
| 6533 | |
| 6534 <div class=title> | |
| 6535 <p class=hittitle>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</p> | |
| 6536 <p class=titleinfo> | |
| 6537 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&log$=nuclalign">gi|567755268|pdb|4CE4|A</a> | |
| 6538 <span class=b>Length:</span> 1570 | |
| 6539 <span class=b>Number of Matches:</span> 1 | |
| 6540 </p> | |
| 6541 </div> | |
| 6542 | |
| 6543 | |
| 6544 <div class=hotspot id=hotspot1-27-1> | |
| 6545 <p class=range> | |
| 6546 <span class=range>Range 1: 1020 to 1028</span> | |
| 6547 </p> | |
| 6548 | |
| 6549 <table class=hotspotstable> | |
| 6550 <tr> | |
| 6551 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6552 </tr> | |
| 6553 <tr> | |
| 6554 <td>18.3341 bits (9)</td> | |
| 6555 <td>11.9013</td> | |
| 6556 <td>9/9 (100%)</td> | |
| 6557 <td>0/9 (0%)</td> | |
| 6558 <td>Plus/Plus</td> | |
| 6559 </tr> | |
| 6560 </table> | |
| 6561 | |
| 6562 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16 | |
| 6563 ||||||||| | |
| 6564 Subject 1020 CGTGAAGAG 1028</pre> | |
| 6565 </div> | |
| 6566 | |
| 6567 </div> | |
| 6568 | |
| 6569 <div class=alignment id=hit1-28> | |
| 6570 | |
| 6571 <div class=linkheader> | |
| 6572 <div class=right><a href="#description1-28">Descriptions</a></div> | |
| 6573 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6574 </div> | |
| 6575 | |
| 6576 <div class=title> | |
| 6577 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6578 <p class=titleinfo> | |
| 6579 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&log$=nuclalign">gi|558704783|pdb|4BYP|5</a> | |
| 6580 <span class=b>Length:</span> 3396 | |
| 6581 <span class=b>Number of Matches:</span> 5 | |
| 6582 </p> | |
| 6583 </div> | |
| 6584 | |
| 6585 | |
| 6586 <div class=hotspot id=hotspot1-28-1> | |
| 6587 <p class=range> | |
| 6588 <span class=range>Range 1: 2959 to 2967</span> | |
| 6589 </p> | |
| 6590 | |
| 6591 <table class=hotspotstable> | |
| 6592 <tr> | |
| 6593 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6594 </tr> | |
| 6595 <tr> | |
| 6596 <td>18.3341 bits (9)</td> | |
| 6597 <td>11.9013</td> | |
| 6598 <td>9/9 (100%)</td> | |
| 6599 <td>0/9 (0%)</td> | |
| 6600 <td>Plus/Plus</td> | |
| 6601 </tr> | |
| 6602 </table> | |
| 6603 | |
| 6604 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6605 ||||||||| | |
| 6606 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6607 </div> | |
| 6608 <div class=hotspot id=hotspot1-28-2> | |
| 6609 <p class=range> | |
| 6610 <span class=range>Range 2: 1634 to 1627</span> | |
| 6611 </p> | |
| 6612 | |
| 6613 <table class=hotspotstable> | |
| 6614 <tr> | |
| 6615 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6616 </tr> | |
| 6617 <tr> | |
| 6618 <td>16.3517 bits (8)</td> | |
| 6619 <td>47.0266</td> | |
| 6620 <td>8/8 (100%)</td> | |
| 6621 <td>0/8 (0%)</td> | |
| 6622 <td>Plus/Minus</td> | |
| 6623 </tr> | |
| 6624 </table> | |
| 6625 | |
| 6626 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6627 |||||||| | |
| 6628 Subject 1634 CGTGAAGA 1627</pre> | |
| 6629 </div> | |
| 6630 <div class=hotspot id=hotspot1-28-3> | |
| 6631 <p class=range> | |
| 6632 <span class=range>Range 3: 2435 to 2442</span> | |
| 6633 </p> | |
| 6634 | |
| 6635 <table class=hotspotstable> | |
| 6636 <tr> | |
| 6637 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6638 </tr> | |
| 6639 <tr> | |
| 6640 <td>16.3517 bits (8)</td> | |
| 6641 <td>47.0266</td> | |
| 6642 <td>8/8 (100%)</td> | |
| 6643 <td>0/8 (0%)</td> | |
| 6644 <td>Plus/Plus</td> | |
| 6645 </tr> | |
| 6646 </table> | |
| 6647 | |
| 6648 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6649 |||||||| | |
| 6650 Subject 2435 GTGAAGAG 2442</pre> | |
| 6651 </div> | |
| 6652 <div class=hotspot id=hotspot1-28-4> | |
| 6653 <p class=range> | |
| 6654 <span class=range>Range 4: 1100 to 1106</span> | |
| 6655 </p> | |
| 6656 | |
| 6657 <table class=hotspotstable> | |
| 6658 <tr> | |
| 6659 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6660 </tr> | |
| 6661 <tr> | |
| 6662 <td>14.3694 bits (7)</td> | |
| 6663 <td>185.82</td> | |
| 6664 <td>7/7 (100%)</td> | |
| 6665 <td>0/7 (0%)</td> | |
| 6666 <td>Plus/Plus</td> | |
| 6667 </tr> | |
| 6668 </table> | |
| 6669 | |
| 6670 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6671 ||||||| | |
| 6672 Subject 1100 TGAAGAG 1106</pre> | |
| 6673 </div> | |
| 6674 <div class=hotspot id=hotspot1-28-5> | |
| 6675 <p class=range> | |
| 6676 <span class=range>Range 5: 2216 to 2222</span> | |
| 6677 </p> | |
| 6678 | |
| 6679 <table class=hotspotstable> | |
| 6680 <tr> | |
| 6681 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6682 </tr> | |
| 6683 <tr> | |
| 6684 <td>14.3694 bits (7)</td> | |
| 6685 <td>185.82</td> | |
| 6686 <td>7/7 (100%)</td> | |
| 6687 <td>0/7 (0%)</td> | |
| 6688 <td>Plus/Plus</td> | |
| 6689 </tr> | |
| 6690 </table> | |
| 6691 | |
| 6692 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6693 ||||||| | |
| 6694 Subject 2216 GTGAAGA 2222</pre> | |
| 6695 </div> | |
| 6696 | |
| 6697 </div> | |
| 6698 | |
| 6699 <div class=alignment id=hit1-29> | |
| 6700 | |
| 6701 <div class=linkheader> | |
| 6702 <div class=right><a href="#description1-29">Descriptions</a></div> | |
| 6703 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6704 </div> | |
| 6705 | |
| 6706 <div class=title> | |
| 6707 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p> | |
| 6708 <p class=titleinfo> | |
| 6709 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&log$=nuclalign">gi|558704825|pdb|4BYW|5</a> | |
| 6710 <span class=b>Length:</span> 3396 | |
| 6711 <span class=b>Number of Matches:</span> 5 | |
| 6712 </p> | |
| 6713 </div> | |
| 6714 | |
| 6715 | |
| 6716 <div class=hotspot id=hotspot1-29-1> | |
| 6717 <p class=range> | |
| 6718 <span class=range>Range 1: 2959 to 2967</span> | |
| 6719 </p> | |
| 6720 | |
| 6721 <table class=hotspotstable> | |
| 6722 <tr> | |
| 6723 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6724 </tr> | |
| 6725 <tr> | |
| 6726 <td>18.3341 bits (9)</td> | |
| 6727 <td>11.9013</td> | |
| 6728 <td>9/9 (100%)</td> | |
| 6729 <td>0/9 (0%)</td> | |
| 6730 <td>Plus/Plus</td> | |
| 6731 </tr> | |
| 6732 </table> | |
| 6733 | |
| 6734 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6735 ||||||||| | |
| 6736 Subject 2959 CCGTCGTGA 2967</pre> | |
| 6737 </div> | |
| 6738 <div class=hotspot id=hotspot1-29-2> | |
| 6739 <p class=range> | |
| 6740 <span class=range>Range 2: 1634 to 1627</span> | |
| 6741 </p> | |
| 6742 | |
| 6743 <table class=hotspotstable> | |
| 6744 <tr> | |
| 6745 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6746 </tr> | |
| 6747 <tr> | |
| 6748 <td>16.3517 bits (8)</td> | |
| 6749 <td>47.0266</td> | |
| 6750 <td>8/8 (100%)</td> | |
| 6751 <td>0/8 (0%)</td> | |
| 6752 <td>Plus/Minus</td> | |
| 6753 </tr> | |
| 6754 </table> | |
| 6755 | |
| 6756 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15 | |
| 6757 |||||||| | |
| 6758 Subject 1634 CGTGAAGA 1627</pre> | |
| 6759 </div> | |
| 6760 <div class=hotspot id=hotspot1-29-3> | |
| 6761 <p class=range> | |
| 6762 <span class=range>Range 3: 2435 to 2442</span> | |
| 6763 </p> | |
| 6764 | |
| 6765 <table class=hotspotstable> | |
| 6766 <tr> | |
| 6767 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6768 </tr> | |
| 6769 <tr> | |
| 6770 <td>16.3517 bits (8)</td> | |
| 6771 <td>47.0266</td> | |
| 6772 <td>8/8 (100%)</td> | |
| 6773 <td>0/8 (0%)</td> | |
| 6774 <td>Plus/Plus</td> | |
| 6775 </tr> | |
| 6776 </table> | |
| 6777 | |
| 6778 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 6779 |||||||| | |
| 6780 Subject 2435 GTGAAGAG 2442</pre> | |
| 6781 </div> | |
| 6782 <div class=hotspot id=hotspot1-29-4> | |
| 6783 <p class=range> | |
| 6784 <span class=range>Range 4: 1100 to 1106</span> | |
| 6785 </p> | |
| 6786 | |
| 6787 <table class=hotspotstable> | |
| 6788 <tr> | |
| 6789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6790 </tr> | |
| 6791 <tr> | |
| 6792 <td>14.3694 bits (7)</td> | |
| 6793 <td>185.82</td> | |
| 6794 <td>7/7 (100%)</td> | |
| 6795 <td>0/7 (0%)</td> | |
| 6796 <td>Plus/Plus</td> | |
| 6797 </tr> | |
| 6798 </table> | |
| 6799 | |
| 6800 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 6801 ||||||| | |
| 6802 Subject 1100 TGAAGAG 1106</pre> | |
| 6803 </div> | |
| 6804 <div class=hotspot id=hotspot1-29-5> | |
| 6805 <p class=range> | |
| 6806 <span class=range>Range 5: 2216 to 2222</span> | |
| 6807 </p> | |
| 6808 | |
| 6809 <table class=hotspotstable> | |
| 6810 <tr> | |
| 6811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6812 </tr> | |
| 6813 <tr> | |
| 6814 <td>14.3694 bits (7)</td> | |
| 6815 <td>185.82</td> | |
| 6816 <td>7/7 (100%)</td> | |
| 6817 <td>0/7 (0%)</td> | |
| 6818 <td>Plus/Plus</td> | |
| 6819 </tr> | |
| 6820 </table> | |
| 6821 | |
| 6822 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 6823 ||||||| | |
| 6824 Subject 2216 GTGAAGA 2222</pre> | |
| 6825 </div> | |
| 6826 | |
| 6827 </div> | |
| 6828 | |
| 6829 <div class=alignment id=hit1-31> | |
| 6830 | |
| 6831 <div class=linkheader> | |
| 6832 <div class=right><a href="#description1-31">Descriptions</a></div> | |
| 6833 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6834 </div> | |
| 6835 | |
| 6836 <div class=title> | |
| 6837 <p class=hittitle>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</p> | |
| 6838 <p class=titleinfo> | |
| 6839 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&log$=nuclalign">gi|508123724|pdb|4HUB|0</a> | |
| 6840 <span class=b>Length:</span> 2910 | |
| 6841 <span class=b>Number of Matches:</span> 3 | |
| 6842 </p> | |
| 6843 </div> | |
| 6844 | |
| 6845 | |
| 6846 <div class=hotspot id=hotspot1-31-1> | |
| 6847 <p class=range> | |
| 6848 <span class=range>Range 1: 298 to 290</span> | |
| 6849 </p> | |
| 6850 | |
| 6851 <table class=hotspotstable> | |
| 6852 <tr> | |
| 6853 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6854 </tr> | |
| 6855 <tr> | |
| 6856 <td>18.3341 bits (9)</td> | |
| 6857 <td>11.9013</td> | |
| 6858 <td>9/9 (100%)</td> | |
| 6859 <td>0/9 (0%)</td> | |
| 6860 <td>Plus/Minus</td> | |
| 6861 </tr> | |
| 6862 </table> | |
| 6863 | |
| 6864 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15 | |
| 6865 ||||||||| | |
| 6866 Subject 298 TCGTGAAGA 290</pre> | |
| 6867 </div> | |
| 6868 <div class=hotspot id=hotspot1-31-2> | |
| 6869 <p class=range> | |
| 6870 <span class=range>Range 2: 2618 to 2626</span> | |
| 6871 </p> | |
| 6872 | |
| 6873 <table class=hotspotstable> | |
| 6874 <tr> | |
| 6875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6876 </tr> | |
| 6877 <tr> | |
| 6878 <td>18.3341 bits (9)</td> | |
| 6879 <td>11.9013</td> | |
| 6880 <td>9/9 (100%)</td> | |
| 6881 <td>0/9 (0%)</td> | |
| 6882 <td>Plus/Plus</td> | |
| 6883 </tr> | |
| 6884 </table> | |
| 6885 | |
| 6886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6887 ||||||||| | |
| 6888 Subject 2618 CCGTCGTGA 2626</pre> | |
| 6889 </div> | |
| 6890 <div class=hotspot id=hotspot1-31-3> | |
| 6891 <p class=range> | |
| 6892 <span class=range>Range 3: 2599 to 2605</span> | |
| 6893 </p> | |
| 6894 | |
| 6895 <table class=hotspotstable> | |
| 6896 <tr> | |
| 6897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6898 </tr> | |
| 6899 <tr> | |
| 6900 <td>14.3694 bits (7)</td> | |
| 6901 <td>185.82</td> | |
| 6902 <td>7/7 (100%)</td> | |
| 6903 <td>0/7 (0%)</td> | |
| 6904 <td>Plus/Plus</td> | |
| 6905 </tr> | |
| 6906 </table> | |
| 6907 | |
| 6908 <pre class=alignmentgraphic>Query 6 GTCGTGA 12 | |
| 6909 ||||||| | |
| 6910 Subject 2599 GTCGTGA 2605</pre> | |
| 6911 </div> | |
| 6912 | |
| 6913 </div> | |
| 6914 | |
| 6915 <div class=alignment id=hit1-32> | |
| 6916 | |
| 6917 <div class=linkheader> | |
| 6918 <div class=right><a href="#description1-32">Descriptions</a></div> | |
| 6919 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 6920 </div> | |
| 6921 | |
| 6922 <div class=title> | |
| 6923 <p class=hittitle>Chain 5, Structure Of The H. Sapiens 60s Rrna</p> | |
| 6924 <p class=titleinfo> | |
| 6925 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&log$=nuclalign">gi|485601478|pdb|3J3F|5</a> | |
| 6926 <span class=b>Length:</span> 5070 | |
| 6927 <span class=b>Number of Matches:</span> 8 | |
| 6928 </p> | |
| 6929 </div> | |
| 6930 | |
| 6931 | |
| 6932 <div class=hotspot id=hotspot1-32-1> | |
| 6933 <p class=range> | |
| 6934 <span class=range>Range 1: 4536 to 4544</span> | |
| 6935 </p> | |
| 6936 | |
| 6937 <table class=hotspotstable> | |
| 6938 <tr> | |
| 6939 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6940 </tr> | |
| 6941 <tr> | |
| 6942 <td>18.3341 bits (9)</td> | |
| 6943 <td>11.9013</td> | |
| 6944 <td>9/9 (100%)</td> | |
| 6945 <td>0/9 (0%)</td> | |
| 6946 <td>Plus/Plus</td> | |
| 6947 </tr> | |
| 6948 </table> | |
| 6949 | |
| 6950 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 6951 ||||||||| | |
| 6952 Subject 4536 CCGTCGTGA 4544</pre> | |
| 6953 </div> | |
| 6954 <div class=hotspot id=hotspot1-32-2> | |
| 6955 <p class=range> | |
| 6956 <span class=range>Range 2: 765 to 772</span> | |
| 6957 </p> | |
| 6958 | |
| 6959 <table class=hotspotstable> | |
| 6960 <tr> | |
| 6961 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6962 </tr> | |
| 6963 <tr> | |
| 6964 <td>16.3517 bits (8)</td> | |
| 6965 <td>47.0266</td> | |
| 6966 <td>8/8 (100%)</td> | |
| 6967 <td>0/8 (0%)</td> | |
| 6968 <td>Plus/Plus</td> | |
| 6969 </tr> | |
| 6970 </table> | |
| 6971 | |
| 6972 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6973 |||||||| | |
| 6974 Subject 765 CGTCCGTC 772</pre> | |
| 6975 </div> | |
| 6976 <div class=hotspot id=hotspot1-32-3> | |
| 6977 <p class=range> | |
| 6978 <span class=range>Range 3: 769 to 776</span> | |
| 6979 </p> | |
| 6980 | |
| 6981 <table class=hotspotstable> | |
| 6982 <tr> | |
| 6983 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 6984 </tr> | |
| 6985 <tr> | |
| 6986 <td>16.3517 bits (8)</td> | |
| 6987 <td>47.0266</td> | |
| 6988 <td>8/8 (100%)</td> | |
| 6989 <td>0/8 (0%)</td> | |
| 6990 <td>Plus/Plus</td> | |
| 6991 </tr> | |
| 6992 </table> | |
| 6993 | |
| 6994 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 6995 |||||||| | |
| 6996 Subject 769 CGTCCGTC 776</pre> | |
| 6997 </div> | |
| 6998 <div class=hotspot id=hotspot1-32-4> | |
| 6999 <p class=range> | |
| 7000 <span class=range>Range 4: 773 to 780</span> | |
| 7001 </p> | |
| 7002 | |
| 7003 <table class=hotspotstable> | |
| 7004 <tr> | |
| 7005 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7006 </tr> | |
| 7007 <tr> | |
| 7008 <td>16.3517 bits (8)</td> | |
| 7009 <td>47.0266</td> | |
| 7010 <td>8/8 (100%)</td> | |
| 7011 <td>0/8 (0%)</td> | |
| 7012 <td>Plus/Plus</td> | |
| 7013 </tr> | |
| 7014 </table> | |
| 7015 | |
| 7016 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 7017 |||||||| | |
| 7018 Subject 773 CGTCCGTC 780</pre> | |
| 7019 </div> | |
| 7020 <div class=hotspot id=hotspot1-32-5> | |
| 7021 <p class=range> | |
| 7022 <span class=range>Range 5: 777 to 784</span> | |
| 7023 </p> | |
| 7024 | |
| 7025 <table class=hotspotstable> | |
| 7026 <tr> | |
| 7027 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7028 </tr> | |
| 7029 <tr> | |
| 7030 <td>16.3517 bits (8)</td> | |
| 7031 <td>47.0266</td> | |
| 7032 <td>8/8 (100%)</td> | |
| 7033 <td>0/8 (0%)</td> | |
| 7034 <td>Plus/Plus</td> | |
| 7035 </tr> | |
| 7036 </table> | |
| 7037 | |
| 7038 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8 | |
| 7039 |||||||| | |
| 7040 Subject 777 CGTCCGTC 784</pre> | |
| 7041 </div> | |
| 7042 <div class=hotspot id=hotspot1-32-6> | |
| 7043 <p class=range> | |
| 7044 <span class=range>Range 6: 3939 to 3946</span> | |
| 7045 </p> | |
| 7046 | |
| 7047 <table class=hotspotstable> | |
| 7048 <tr> | |
| 7049 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7050 </tr> | |
| 7051 <tr> | |
| 7052 <td>16.3517 bits (8)</td> | |
| 7053 <td>47.0266</td> | |
| 7054 <td>8/8 (100%)</td> | |
| 7055 <td>0/8 (0%)</td> | |
| 7056 <td>Plus/Plus</td> | |
| 7057 </tr> | |
| 7058 </table> | |
| 7059 | |
| 7060 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 7061 |||||||| | |
| 7062 Subject 3939 GTGAAGAG 3946</pre> | |
| 7063 </div> | |
| 7064 <div class=hotspot id=hotspot1-32-7> | |
| 7065 <p class=range> | |
| 7066 <span class=range>Range 7: 393 to 399</span> | |
| 7067 </p> | |
| 7068 | |
| 7069 <table class=hotspotstable> | |
| 7070 <tr> | |
| 7071 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7072 </tr> | |
| 7073 <tr> | |
| 7074 <td>14.3694 bits (7)</td> | |
| 7075 <td>185.82</td> | |
| 7076 <td>7/7 (100%)</td> | |
| 7077 <td>0/7 (0%)</td> | |
| 7078 <td>Plus/Plus</td> | |
| 7079 </tr> | |
| 7080 </table> | |
| 7081 | |
| 7082 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7083 ||||||| | |
| 7084 Subject 393 TGAAGAG 399</pre> | |
| 7085 </div> | |
| 7086 <div class=hotspot id=hotspot1-32-8> | |
| 7087 <p class=range> | |
| 7088 <span class=range>Range 8: 3720 to 3726</span> | |
| 7089 </p> | |
| 7090 | |
| 7091 <table class=hotspotstable> | |
| 7092 <tr> | |
| 7093 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7094 </tr> | |
| 7095 <tr> | |
| 7096 <td>14.3694 bits (7)</td> | |
| 7097 <td>185.82</td> | |
| 7098 <td>7/7 (100%)</td> | |
| 7099 <td>0/7 (0%)</td> | |
| 7100 <td>Plus/Plus</td> | |
| 7101 </tr> | |
| 7102 </table> | |
| 7103 | |
| 7104 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7105 ||||||| | |
| 7106 Subject 3720 GTGAAGA 3726</pre> | |
| 7107 </div> | |
| 7108 | |
| 7109 </div> | |
| 7110 | |
| 7111 <div class=alignment id=hit1-33> | |
| 7112 | |
| 7113 <div class=linkheader> | |
| 7114 <div class=right><a href="#description1-33">Descriptions</a></div> | |
| 7115 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 7116 </div> | |
| 7117 | |
| 7118 <div class=title> | |
| 7119 <p class=hittitle>Chain 5, Structure Of The D. Melanogaster 60s Rrna</p> | |
| 7120 <p class=titleinfo> | |
| 7121 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&log$=nuclalign">gi|485601474|pdb|3J3E|5</a> | |
| 7122 <span class=b>Length:</span> 3970 | |
| 7123 <span class=b>Number of Matches:</span> 4 | |
| 7124 </p> | |
| 7125 </div> | |
| 7126 | |
| 7127 | |
| 7128 <div class=hotspot id=hotspot1-33-1> | |
| 7129 <p class=range> | |
| 7130 <span class=range>Range 1: 3490 to 3498</span> | |
| 7131 </p> | |
| 7132 | |
| 7133 <table class=hotspotstable> | |
| 7134 <tr> | |
| 7135 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7136 </tr> | |
| 7137 <tr> | |
| 7138 <td>18.3341 bits (9)</td> | |
| 7139 <td>11.9013</td> | |
| 7140 <td>9/9 (100%)</td> | |
| 7141 <td>0/9 (0%)</td> | |
| 7142 <td>Plus/Plus</td> | |
| 7143 </tr> | |
| 7144 </table> | |
| 7145 | |
| 7146 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7147 ||||||||| | |
| 7148 Subject 3490 CCGTCGTGA 3498</pre> | |
| 7149 </div> | |
| 7150 <div class=hotspot id=hotspot1-33-2> | |
| 7151 <p class=range> | |
| 7152 <span class=range>Range 2: 2177 to 2184</span> | |
| 7153 </p> | |
| 7154 | |
| 7155 <table class=hotspotstable> | |
| 7156 <tr> | |
| 7157 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7158 </tr> | |
| 7159 <tr> | |
| 7160 <td>16.3517 bits (8)</td> | |
| 7161 <td>47.0266</td> | |
| 7162 <td>8/8 (100%)</td> | |
| 7163 <td>0/8 (0%)</td> | |
| 7164 <td>Plus/Plus</td> | |
| 7165 </tr> | |
| 7166 </table> | |
| 7167 | |
| 7168 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16 | |
| 7169 |||||||| | |
| 7170 Subject 2177 GTGAAGAG 2184</pre> | |
| 7171 </div> | |
| 7172 <div class=hotspot id=hotspot1-33-3> | |
| 7173 <p class=range> | |
| 7174 <span class=range>Range 3: 2594 to 2600</span> | |
| 7175 </p> | |
| 7176 | |
| 7177 <table class=hotspotstable> | |
| 7178 <tr> | |
| 7179 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7180 </tr> | |
| 7181 <tr> | |
| 7182 <td>14.3694 bits (7)</td> | |
| 7183 <td>185.82</td> | |
| 7184 <td>7/7 (100%)</td> | |
| 7185 <td>0/7 (0%)</td> | |
| 7186 <td>Plus/Plus</td> | |
| 7187 </tr> | |
| 7188 </table> | |
| 7189 | |
| 7190 <pre class=alignmentgraphic>Query 9 GTGAAGA 15 | |
| 7191 ||||||| | |
| 7192 Subject 2594 GTGAAGA 2600</pre> | |
| 7193 </div> | |
| 7194 <div class=hotspot id=hotspot1-33-4> | |
| 7195 <p class=range> | |
| 7196 <span class=range>Range 4: 3627 to 3633</span> | |
| 7197 </p> | |
| 7198 | |
| 7199 <table class=hotspotstable> | |
| 7200 <tr> | |
| 7201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7202 </tr> | |
| 7203 <tr> | |
| 7204 <td>14.3694 bits (7)</td> | |
| 7205 <td>185.82</td> | |
| 7206 <td>7/7 (100%)</td> | |
| 7207 <td>0/7 (0%)</td> | |
| 7208 <td>Plus/Plus</td> | |
| 7209 </tr> | |
| 7210 </table> | |
| 7211 | |
| 7212 <pre class=alignmentgraphic>Query 1 CGTCCGT 7 | |
| 7213 ||||||| | |
| 7214 Subject 3627 CGTCCGT 3633</pre> | |
| 7215 </div> | |
| 7216 | |
| 7217 </div> | |
| 7218 | |
| 7219 <div class=alignment id=hit1-34> | |
| 7220 | |
| 7221 <div class=linkheader> | |
| 7222 <div class=right><a href="#description1-34">Descriptions</a></div> | |
| 7223 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">Gene Bank</a> | |
| 7224 </div> | |
| 7225 | |
| 7226 <div class=title> | |
| 7227 <p class=hittitle>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</p> | |
| 7228 <p class=titleinfo> | |
| 7229 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&log$=nuclalign">gi|449802187|pdb|3ZEX|B</a> | |
| 7230 <span class=b>Length:</span> 1465 | |
| 7231 <span class=b>Number of Matches:</span> 2 | |
| 7232 </p> | |
| 7233 </div> | |
| 7234 | |
| 7235 | |
| 7236 <div class=hotspot id=hotspot1-34-1> | |
| 7237 <p class=range> | |
| 7238 <span class=range>Range 1: 1334 to 1342</span> | |
| 7239 </p> | |
| 7240 | |
| 7241 <table class=hotspotstable> | |
| 7242 <tr> | |
| 7243 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7244 </tr> | |
| 7245 <tr> | |
| 7246 <td>18.3341 bits (9)</td> | |
| 7247 <td>11.9013</td> | |
| 7248 <td>9/9 (100%)</td> | |
| 7249 <td>0/9 (0%)</td> | |
| 7250 <td>Plus/Plus</td> | |
| 7251 </tr> | |
| 7252 </table> | |
| 7253 | |
| 7254 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12 | |
| 7255 ||||||||| | |
| 7256 Subject 1334 CCGTCGTGA 1342</pre> | |
| 7257 </div> | |
| 7258 <div class=hotspot id=hotspot1-34-2> | |
| 7259 <p class=range> | |
| 7260 <span class=range>Range 2: 705 to 711</span> | |
| 7261 </p> | |
| 7262 | |
| 7263 <table class=hotspotstable> | |
| 7264 <tr> | |
| 7265 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> | |
| 7266 </tr> | |
| 7267 <tr> | |
| 7268 <td>14.3694 bits (7)</td> | |
| 7269 <td>185.82</td> | |
| 7270 <td>7/7 (100%)</td> | |
| 7271 <td>0/7 (0%)</td> | |
| 7272 <td>Plus/Plus</td> | |
| 7273 </tr> | |
| 7274 </table> | |
| 7275 | |
| 7276 <pre class=alignmentgraphic>Query 10 TGAAGAG 16 | |
| 7277 ||||||| | |
| 7278 Subject 705 TGAAGAG 711</pre> | |
| 7279 </div> | |
| 7280 | |
| 7281 </div> | |
| 7282 | |
| 7283 <div class=alignment id=hit1-36> | 7283 <div class=alignment id=hit1-36> |
| 7284 | 7284 |
| 7285 <div class=linkheader> | 7285 <div class=linkheader> |
| 7286 <div class=right><a href="#description1-36">Descriptions</a></div> | 7286 <div class=right><a href="#description1-36">Descriptions</a></div> |
| 7287 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&log$=nuclalign">Gene Bank</a> | 7287 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&log$=nuclalign">Gene Bank</a> |