Mercurial > repos > jankanis > blast2html
comparison blast2html.py @ 23:6995a6f34f3f
fix sectioning, add footer
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Thu, 15 May 2014 11:05:39 +0200 |
| parents | efce16c98650 |
| children | c8347745bbad |
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| 22:efce16c98650 | 23:6995a6f34f3f |
|---|---|
| 230 query_length = blastxml_len(result) | 230 query_length = blastxml_len(result) |
| 231 skip = math.ceil(query_length / self.max_scale_labels) | 231 skip = math.ceil(query_length / self.max_scale_labels) |
| 232 percent_multiplier = 100 / query_length | 232 percent_multiplier = 100 / query_length |
| 233 for i in range(1, query_length+1): | 233 for i in range(1, query_length+1): |
| 234 if i % skip == 0: | 234 if i % skip == 0: |
| 235 yield dict(label = i, width = skip * percent_multiplier, shorter = False\) | 235 yield dict(label = i, width = skip * percent_multiplier) |
| 236 if query_length % skip != 0: | 236 if query_length % skip != 0: |
| 237 yield dict(label = query_length, | 237 yield dict(label = query_length, |
| 238 width = (query_length % skip) * percent_multiplier, | 238 width = (query_length % skip) * percent_multiplier) |
| 239 shorter = True) | |
| 240 | 239 |
| 241 @filter | 240 @filter |
| 242 def hit_info(self, result): | 241 def hit_info(self, result): |
| 243 | 242 |
| 244 query_length = blastxml_len(result) | 243 query_length = blastxml_len(result) |