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comparison test-data/blast xml example3.html @ 118:7f3f8c10f44b

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fix for Rikilt issues 8, 11, 12, 14
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 31 Jul 2014 13:09:30 +0200
parents 4f0ed3b5ae46
children
comparison
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117:8ae714069687 118:7f3f8c10f44b
717 <div class=legend><div class=graphicrow> 717 <div class=legend><div class=graphicrow>
718 <div class=graphicitem style="background-color: black">&lt;40</div> 718 <div class=graphicitem style="background-color: black">&lt;40</div>
719 <div class=graphicitem style="background-color: blue">40–50</div> 719 <div class=graphicitem style="background-color: blue">40–50</div>
720 <div class=graphicitem style="background-color: green">50–80</div> 720 <div class=graphicitem style="background-color: green">50–80</div>
721 <div class=graphicitem style="background-color: magenta">80–200</div> 721 <div class=graphicitem style="background-color: magenta">80–200</div>
722 <div class=graphicitem style="background-color: red">200≤</div> 722 <div class=graphicitem style="background-color: red">≥200</div>
723 </div></div> 723 </div></div>
724 <div style="clear: left"></div> 724 <div style="clear: left"></div>
725 725
726 <div class=tablewrapper> 726 <div class=tablewrapper>
727 727
808 <td>37.4</td> 808 <td>37.4</td>
809 <td>37.4</td> 809 <td>37.4</td>
810 <td>100%</td> 810 <td>100%</td>
811 <td>7.011e-08</td> 811 <td>7.011e-08</td>
812 <td>100%</td> 812 <td>100%</td>
813 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td> 813 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td>
814 </tr> 814 </tr>
815 </table> 815 </table>
816 816
817 </div></div> 817 </div></div>
818 </section> 818 </section>
825 <div class=grey><div class=white> 825 <div class=grey><div class=white>
826 <div class=alignment id=hit3-1> 826 <div class=alignment id=hit3-1>
827 827
828 <div class=linkheader> 828 <div class=linkheader>
829 <div class=right><a href="#description3-1">Descriptions</a></div> 829 <div class=right><a href="#description3-1">Descriptions</a></div>
830 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Gene Bank</a> 830 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Gene Bank</a>
831 </div> 831 </div>
832 832
833 <div class=title> 833 <div class=title>
834 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p> 834 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
835 <p class=titleinfo> 835 <p class=titleinfo>
836 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a> 836 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a>
837 <span class=b>Length:</span> 323 837 <span class=b>Length:</span> 323
838 <span class=b>Number of Matches:</span> 1 838 <span class=b>Number of Matches:</span> 1
839 </p> 839 </p>
840 </div> 840 </div>
841 841
848 <table class=hotspotstable> 848 <table class=hotspotstable>
849 <tr> 849 <tr>
850 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 850 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
851 </tr> 851 </tr>
852 <tr> 852 <tr>
853 <td>37.4 bits(40)</td> 853 <td>37.3537 bits (40)</td>
854 <td>0.0</td> 854 <td>7.01052e-08</td>
855 <td>20/20(100%)</td> 855 <td>20/20 (100%)</td>
856 <td>0/20(0%)</td> 856 <td>0/20 (0%)</td>
857 <td>Plus/Plus</td> 857 <td>Plus/Plus</td>
858 </tr> 858 </tr>
859 </table> 859 </table>
860 860
861 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20 861 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
950 <div class=legend><div class=graphicrow> 950 <div class=legend><div class=graphicrow>
951 <div class=graphicitem style="background-color: black">&lt;40</div> 951 <div class=graphicitem style="background-color: black">&lt;40</div>
952 <div class=graphicitem style="background-color: blue">40–50</div> 952 <div class=graphicitem style="background-color: blue">40–50</div>
953 <div class=graphicitem style="background-color: green">50–80</div> 953 <div class=graphicitem style="background-color: green">50–80</div>
954 <div class=graphicitem style="background-color: magenta">80–200</div> 954 <div class=graphicitem style="background-color: magenta">80–200</div>
955 <div class=graphicitem style="background-color: red">200≤</div> 955 <div class=graphicitem style="background-color: red">≥200</div>
956 </div></div> 956 </div></div>
957 <div style="clear: left"></div> 957 <div style="clear: left"></div>
958 958
959 <div class=tablewrapper> 959 <div class=tablewrapper>
960 960
1041 <td>37.4</td> 1041 <td>37.4</td>
1042 <td>37.4</td> 1042 <td>37.4</td>
1043 <td>100%</td> 1043 <td>100%</td>
1044 <td>7.011e-08</td> 1044 <td>7.011e-08</td>
1045 <td>100%</td> 1045 <td>100%</td>
1046 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td> 1046 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td>
1047 </tr> 1047 </tr>
1048 </table> 1048 </table>
1049 1049
1050 </div></div> 1050 </div></div>
1051 </section> 1051 </section>
1058 <div class=grey><div class=white> 1058 <div class=grey><div class=white>
1059 <div class=alignment id=hit6-1> 1059 <div class=alignment id=hit6-1>
1060 1060
1061 <div class=linkheader> 1061 <div class=linkheader>
1062 <div class=right><a href="#description6-1">Descriptions</a></div> 1062 <div class=right><a href="#description6-1">Descriptions</a></div>
1063 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Gene Bank</a> 1063 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Gene Bank</a>
1064 </div> 1064 </div>
1065 1065
1066 <div class=title> 1066 <div class=title>
1067 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p> 1067 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
1068 <p class=titleinfo> 1068 <p class=titleinfo>
1069 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a> 1069 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a>
1070 <span class=b>Length:</span> 2457 1070 <span class=b>Length:</span> 2457
1071 <span class=b>Number of Matches:</span> 1 1071 <span class=b>Number of Matches:</span> 1
1072 </p> 1072 </p>
1073 </div> 1073 </div>
1074 1074
1081 <table class=hotspotstable> 1081 <table class=hotspotstable>
1082 <tr> 1082 <tr>
1083 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 1083 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1084 </tr> 1084 </tr>
1085 <tr> 1085 <tr>
1086 <td>37.4 bits(40)</td> 1086 <td>37.3537 bits (40)</td>
1087 <td>0.0</td> 1087 <td>7.01052e-08</td>
1088 <td>20/20(100%)</td> 1088 <td>20/20 (100%)</td>
1089 <td>0/20(0%)</td> 1089 <td>0/20 (0%)</td>
1090 <td>Plus/Plus</td> 1090 <td>Plus/Plus</td>
1091 </tr> 1091 </tr>
1092 </table> 1092 </table>
1093 1093
1094 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20 1094 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
1408 <div class=legend><div class=graphicrow> 1408 <div class=legend><div class=graphicrow>
1409 <div class=graphicitem style="background-color: black">&lt;40</div> 1409 <div class=graphicitem style="background-color: black">&lt;40</div>
1410 <div class=graphicitem style="background-color: blue">40–50</div> 1410 <div class=graphicitem style="background-color: blue">40–50</div>
1411 <div class=graphicitem style="background-color: green">50–80</div> 1411 <div class=graphicitem style="background-color: green">50–80</div>
1412 <div class=graphicitem style="background-color: magenta">80–200</div> 1412 <div class=graphicitem style="background-color: magenta">80–200</div>
1413 <div class=graphicitem style="background-color: red">200≤</div> 1413 <div class=graphicitem style="background-color: red">≥200</div>
1414 </div></div> 1414 </div></div>
1415 <div style="clear: left"></div> 1415 <div style="clear: left"></div>
1416 1416
1417 <div class=tablewrapper> 1417 <div class=tablewrapper>
1418 1418
1501 <td>31.9</td> 1501 <td>31.9</td>
1502 <td>31.9</td> 1502 <td>31.9</td>
1503 <td>85%</td> 1503 <td>85%</td>
1504 <td>2.981e-06</td> 1504 <td>2.981e-06</td>
1505 <td>100%</td> 1505 <td>100%</td>
1506 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a></td> 1506 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a></td>
1507 </tr> 1507 </tr>
1508 </table> 1508 </table>
1509 1509
1510 </div></div> 1510 </div></div>
1511 </section> 1511 </section>
1518 <div class=grey><div class=white> 1518 <div class=grey><div class=white>
1519 <div class=alignment id=hit18-1> 1519 <div class=alignment id=hit18-1>
1520 1520
1521 <div class=linkheader> 1521 <div class=linkheader>
1522 <div class=right><a href="#description18-1">Descriptions</a></div> 1522 <div class=right><a href="#description18-1">Descriptions</a></div>
1523 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Gene Bank</a> 1523 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Gene Bank</a>
1524 </div> 1524 </div>
1525 1525
1526 <div class=title> 1526 <div class=title>
1527 <p class=hittitle>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000</p> 1527 <p class=hittitle>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000</p>
1528 <p class=titleinfo> 1528 <p class=titleinfo>
1529 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a> 1529 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a>
1530 <span class=b>Length:</span> 1045 1530 <span class=b>Length:</span> 1045
1531 <span class=b>Number of Matches:</span> 1 1531 <span class=b>Number of Matches:</span> 1
1532 </p> 1532 </p>
1533 </div> 1533 </div>
1534 1534
1541 <table class=hotspotstable> 1541 <table class=hotspotstable>
1542 <tr> 1542 <tr>
1543 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 1543 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1544 </tr> 1544 </tr>
1545 <tr> 1545 <tr>
1546 <td>31.9 bits(34)</td> 1546 <td>31.9436 bits (34)</td>
1547 <td>0.0</td> 1547 <td>2.98095e-06</td>
1548 <td>17/17(100%)</td> 1548 <td>17/17 (100%)</td>
1549 <td>0/17(0%)</td> 1549 <td>0/17 (0%)</td>
1550 <td>Plus/Plus</td> 1550 <td>Plus/Plus</td>
1551 </tr> 1551 </tr>
1552 </table> 1552 </table>
1553 1553
1554 <pre class=alignmentgraphic>Query 4 GCGCGGTGTCATCTATG 20 1554 <pre class=alignmentgraphic>Query 4 GCGCGGTGTCATCTATG 20
1593 <div class=legend><div class=graphicrow> 1593 <div class=legend><div class=graphicrow>
1594 <div class=graphicitem style="background-color: black">&lt;40</div> 1594 <div class=graphicitem style="background-color: black">&lt;40</div>
1595 <div class=graphicitem style="background-color: blue">40–50</div> 1595 <div class=graphicitem style="background-color: blue">40–50</div>
1596 <div class=graphicitem style="background-color: green">50–80</div> 1596 <div class=graphicitem style="background-color: green">50–80</div>
1597 <div class=graphicitem style="background-color: magenta">80–200</div> 1597 <div class=graphicitem style="background-color: magenta">80–200</div>
1598 <div class=graphicitem style="background-color: red">200≤</div> 1598 <div class=graphicitem style="background-color: red">≥200</div>
1599 </div></div> 1599 </div></div>
1600 <div style="clear: left"></div> 1600 <div style="clear: left"></div>
1601 1601
1602 <div class=tablewrapper> 1602 <div class=tablewrapper>
1603 1603
1684 <td>37.4</td> 1684 <td>37.4</td>
1685 <td>37.4</td> 1685 <td>37.4</td>
1686 <td>100%</td> 1686 <td>100%</td>
1687 <td>7.011e-08</td> 1687 <td>7.011e-08</td>
1688 <td>100%</td> 1688 <td>100%</td>
1689 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td> 1689 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td>
1690 </tr> 1690 </tr>
1691 </table> 1691 </table>
1692 1692
1693 </div></div> 1693 </div></div>
1694 </section> 1694 </section>
1701 <div class=grey><div class=white> 1701 <div class=grey><div class=white>
1702 <div class=alignment id=hit19-1> 1702 <div class=alignment id=hit19-1>
1703 1703
1704 <div class=linkheader> 1704 <div class=linkheader>
1705 <div class=right><a href="#description19-1">Descriptions</a></div> 1705 <div class=right><a href="#description19-1">Descriptions</a></div>
1706 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Gene Bank</a> 1706 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Gene Bank</a>
1707 </div> 1707 </div>
1708 1708
1709 <div class=title> 1709 <div class=title>
1710 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p> 1710 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
1711 <p class=titleinfo> 1711 <p class=titleinfo>
1712 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a> 1712 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a>
1713 <span class=b>Length:</span> 323 1713 <span class=b>Length:</span> 323
1714 <span class=b>Number of Matches:</span> 1 1714 <span class=b>Number of Matches:</span> 1
1715 </p> 1715 </p>
1716 </div> 1716 </div>
1717 1717
1724 <table class=hotspotstable> 1724 <table class=hotspotstable>
1725 <tr> 1725 <tr>
1726 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 1726 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1727 </tr> 1727 </tr>
1728 <tr> 1728 <tr>
1729 <td>37.4 bits(40)</td> 1729 <td>37.3537 bits (40)</td>
1730 <td>0.0</td> 1730 <td>7.01052e-08</td>
1731 <td>20/20(100%)</td> 1731 <td>20/20 (100%)</td>
1732 <td>0/20(0%)</td> 1732 <td>0/20 (0%)</td>
1733 <td>Plus/Plus</td> 1733 <td>Plus/Plus</td>
1734 </tr> 1734 </tr>
1735 </table> 1735 </table>
1736 1736
1737 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20 1737 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
1826 <div class=legend><div class=graphicrow> 1826 <div class=legend><div class=graphicrow>
1827 <div class=graphicitem style="background-color: black">&lt;40</div> 1827 <div class=graphicitem style="background-color: black">&lt;40</div>
1828 <div class=graphicitem style="background-color: blue">40–50</div> 1828 <div class=graphicitem style="background-color: blue">40–50</div>
1829 <div class=graphicitem style="background-color: green">50–80</div> 1829 <div class=graphicitem style="background-color: green">50–80</div>
1830 <div class=graphicitem style="background-color: magenta">80–200</div> 1830 <div class=graphicitem style="background-color: magenta">80–200</div>
1831 <div class=graphicitem style="background-color: red">200≤</div> 1831 <div class=graphicitem style="background-color: red">≥200</div>
1832 </div></div> 1832 </div></div>
1833 <div style="clear: left"></div> 1833 <div style="clear: left"></div>
1834 1834
1835 <div class=tablewrapper> 1835 <div class=tablewrapper>
1836 1836
1917 <td>37.4</td> 1917 <td>37.4</td>
1918 <td>37.4</td> 1918 <td>37.4</td>
1919 <td>100%</td> 1919 <td>100%</td>
1920 <td>7.011e-08</td> 1920 <td>7.011e-08</td>
1921 <td>100%</td> 1921 <td>100%</td>
1922 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td> 1922 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td>
1923 </tr> 1923 </tr>
1924 </table> 1924 </table>
1925 1925
1926 </div></div> 1926 </div></div>
1927 </section> 1927 </section>
1934 <div class=grey><div class=white> 1934 <div class=grey><div class=white>
1935 <div class=alignment id=hit22-1> 1935 <div class=alignment id=hit22-1>
1936 1936
1937 <div class=linkheader> 1937 <div class=linkheader>
1938 <div class=right><a href="#description22-1">Descriptions</a></div> 1938 <div class=right><a href="#description22-1">Descriptions</a></div>
1939 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Gene Bank</a> 1939 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Gene Bank</a>
1940 </div> 1940 </div>
1941 1941
1942 <div class=title> 1942 <div class=title>
1943 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p> 1943 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
1944 <p class=titleinfo> 1944 <p class=titleinfo>
1945 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a> 1945 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a>
1946 <span class=b>Length:</span> 2457 1946 <span class=b>Length:</span> 2457
1947 <span class=b>Number of Matches:</span> 1 1947 <span class=b>Number of Matches:</span> 1
1948 </p> 1948 </p>
1949 </div> 1949 </div>
1950 1950
1957 <table class=hotspotstable> 1957 <table class=hotspotstable>
1958 <tr> 1958 <tr>
1959 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 1959 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1960 </tr> 1960 </tr>
1961 <tr> 1961 <tr>
1962 <td>37.4 bits(40)</td> 1962 <td>37.3537 bits (40)</td>
1963 <td>0.0</td> 1963 <td>7.01052e-08</td>
1964 <td>20/20(100%)</td> 1964 <td>20/20 (100%)</td>
1965 <td>0/20(0%)</td> 1965 <td>0/20 (0%)</td>
1966 <td>Plus/Plus</td> 1966 <td>Plus/Plus</td>
1967 </tr> 1967 </tr>
1968 </table> 1968 </table>
1969 1969
1970 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20 1970 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
2609 <div class=legend><div class=graphicrow> 2609 <div class=legend><div class=graphicrow>
2610 <div class=graphicitem style="background-color: black">&lt;40</div> 2610 <div class=graphicitem style="background-color: black">&lt;40</div>
2611 <div class=graphicitem style="background-color: blue">40–50</div> 2611 <div class=graphicitem style="background-color: blue">40–50</div>
2612 <div class=graphicitem style="background-color: green">50–80</div> 2612 <div class=graphicitem style="background-color: green">50–80</div>
2613 <div class=graphicitem style="background-color: magenta">80–200</div> 2613 <div class=graphicitem style="background-color: magenta">80–200</div>
2614 <div class=graphicitem style="background-color: red">200≤</div> 2614 <div class=graphicitem style="background-color: red">≥200</div>
2615 </div></div> 2615 </div></div>
2616 <div style="clear: left"></div> 2616 <div style="clear: left"></div>
2617 2617
2618 <div class=tablewrapper> 2618 <div class=tablewrapper>
2619 2619
2697 <td>37.4</td> 2697 <td>37.4</td>
2698 <td>37.4</td> 2698 <td>37.4</td>
2699 <td>100%</td> 2699 <td>100%</td>
2700 <td>9.338e-08</td> 2700 <td>9.338e-08</td>
2701 <td>92%</td> 2701 <td>92%</td>
2702 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td> 2702 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td>
2703 </tr> 2703 </tr>
2704 </table> 2704 </table>
2705 2705
2706 </div></div> 2706 </div></div>
2707 </section> 2707 </section>
2714 <div class=grey><div class=white> 2714 <div class=grey><div class=white>
2715 <div class=alignment id=hit47-1> 2715 <div class=alignment id=hit47-1>
2716 2716
2717 <div class=linkheader> 2717 <div class=linkheader>
2718 <div class=right><a href="#description47-1">Descriptions</a></div> 2718 <div class=right><a href="#description47-1">Descriptions</a></div>
2719 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Gene Bank</a> 2719 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Gene Bank</a>
2720 </div> 2720 </div>
2721 2721
2722 <div class=title> 2722 <div class=title>
2723 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p> 2723 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
2724 <p class=titleinfo> 2724 <p class=titleinfo>
2725 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a> 2725 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a>
2726 <span class=b>Length:</span> 4180 2726 <span class=b>Length:</span> 4180
2727 <span class=b>Number of Matches:</span> 1 2727 <span class=b>Number of Matches:</span> 1
2728 </p> 2728 </p>
2729 </div> 2729 </div>
2730 2730
2737 <table class=hotspotstable> 2737 <table class=hotspotstable>
2738 <tr> 2738 <tr>
2739 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 2739 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
2740 </tr> 2740 </tr>
2741 <tr> 2741 <tr>
2742 <td>37.4 bits(40)</td> 2742 <td>37.3537 bits (40)</td>
2743 <td>0.0</td> 2743 <td>9.33825e-08</td>
2744 <td>23/25(92%)</td> 2744 <td>23/25 (92%)</td>
2745 <td>0/25(0%)</td> 2745 <td>0/25 (0%)</td>
2746 <td>Plus/Plus</td> 2746 <td>Plus/Plus</td>
2747 </tr> 2747 </tr>
2748 </table> 2748 </table>
2749 2749
2750 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25 2750 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25
2789 <div class=legend><div class=graphicrow> 2789 <div class=legend><div class=graphicrow>
2790 <div class=graphicitem style="background-color: black">&lt;40</div> 2790 <div class=graphicitem style="background-color: black">&lt;40</div>
2791 <div class=graphicitem style="background-color: blue">40–50</div> 2791 <div class=graphicitem style="background-color: blue">40–50</div>
2792 <div class=graphicitem style="background-color: green">50–80</div> 2792 <div class=graphicitem style="background-color: green">50–80</div>
2793 <div class=graphicitem style="background-color: magenta">80–200</div> 2793 <div class=graphicitem style="background-color: magenta">80–200</div>
2794 <div class=graphicitem style="background-color: red">200≤</div> 2794 <div class=graphicitem style="background-color: red">≥200</div>
2795 </div></div> 2795 </div></div>
2796 <div style="clear: left"></div> 2796 <div style="clear: left"></div>
2797 2797
2798 <div class=tablewrapper> 2798 <div class=tablewrapper>
2799 2799
2877 <td>37.4</td> 2877 <td>37.4</td>
2878 <td>37.4</td> 2878 <td>37.4</td>
2879 <td>100%</td> 2879 <td>100%</td>
2880 <td>9.338e-08</td> 2880 <td>9.338e-08</td>
2881 <td>92%</td> 2881 <td>92%</td>
2882 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td> 2882 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td>
2883 </tr> 2883 </tr>
2884 </table> 2884 </table>
2885 2885
2886 </div></div> 2886 </div></div>
2887 </section> 2887 </section>
2894 <div class=grey><div class=white> 2894 <div class=grey><div class=white>
2895 <div class=alignment id=hit48-1> 2895 <div class=alignment id=hit48-1>
2896 2896
2897 <div class=linkheader> 2897 <div class=linkheader>
2898 <div class=right><a href="#description48-1">Descriptions</a></div> 2898 <div class=right><a href="#description48-1">Descriptions</a></div>
2899 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a> 2899 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a>
2900 </div> 2900 </div>
2901 2901
2902 <div class=title> 2902 <div class=title>
2903 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p> 2903 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
2904 <p class=titleinfo> 2904 <p class=titleinfo>
2905 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a> 2905 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a>
2906 <span class=b>Length:</span> 4983 2906 <span class=b>Length:</span> 4983
2907 <span class=b>Number of Matches:</span> 1 2907 <span class=b>Number of Matches:</span> 1
2908 </p> 2908 </p>
2909 </div> 2909 </div>
2910 2910
2917 <table class=hotspotstable> 2917 <table class=hotspotstable>
2918 <tr> 2918 <tr>
2919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 2919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
2920 </tr> 2920 </tr>
2921 <tr> 2921 <tr>
2922 <td>37.4 bits(40)</td> 2922 <td>37.3537 bits (40)</td>
2923 <td>0.0</td> 2923 <td>9.33825e-08</td>
2924 <td>23/25(92%)</td> 2924 <td>23/25 (92%)</td>
2925 <td>0/25(0%)</td> 2925 <td>0/25 (0%)</td>
2926 <td>Plus/Plus</td> 2926 <td>Plus/Plus</td>
2927 </tr> 2927 </tr>
2928 </table> 2928 </table>
2929 2929
2930 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25 2930 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25
3119 <div class=legend><div class=graphicrow> 3119 <div class=legend><div class=graphicrow>
3120 <div class=graphicitem style="background-color: black">&lt;40</div> 3120 <div class=graphicitem style="background-color: black">&lt;40</div>
3121 <div class=graphicitem style="background-color: blue">40–50</div> 3121 <div class=graphicitem style="background-color: blue">40–50</div>
3122 <div class=graphicitem style="background-color: green">50–80</div> 3122 <div class=graphicitem style="background-color: green">50–80</div>
3123 <div class=graphicitem style="background-color: magenta">80–200</div> 3123 <div class=graphicitem style="background-color: magenta">80–200</div>
3124 <div class=graphicitem style="background-color: red">200≤</div> 3124 <div class=graphicitem style="background-color: red">≥200</div>
3125 </div></div> 3125 </div></div>
3126 <div style="clear: left"></div> 3126 <div style="clear: left"></div>
3127 3127
3128 <div class=tablewrapper> 3128 <div class=tablewrapper>
3129 3129
3211 <td>89.7</td> 3211 <td>89.7</td>
3212 <td>89.7</td> 3212 <td>89.7</td>
3213 <td>100%</td> 3213 <td>100%</td>
3214 <td>6.629e-23</td> 3214 <td>6.629e-23</td>
3215 <td>86%</td> 3215 <td>86%</td>
3216 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td> 3216 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td>
3217 </tr> 3217 </tr>
3218 </table> 3218 </table>
3219 3219
3220 </div></div> 3220 </div></div>
3221 </section> 3221 </section>
3228 <div class=grey><div class=white> 3228 <div class=grey><div class=white>
3229 <div class=alignment id=hit55-1> 3229 <div class=alignment id=hit55-1>
3230 3230
3231 <div class=linkheader> 3231 <div class=linkheader>
3232 <div class=right><a href="#description55-1">Descriptions</a></div> 3232 <div class=right><a href="#description55-1">Descriptions</a></div>
3233 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Gene Bank</a> 3233 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Gene Bank</a>
3234 </div> 3234 </div>
3235 3235
3236 <div class=title> 3236 <div class=title>
3237 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p> 3237 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
3238 <p class=titleinfo> 3238 <p class=titleinfo>
3239 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a> 3239 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a>
3240 <span class=b>Length:</span> 4180 3240 <span class=b>Length:</span> 4180
3241 <span class=b>Number of Matches:</span> 1 3241 <span class=b>Number of Matches:</span> 1
3242 </p> 3242 </p>
3243 </div> 3243 </div>
3244 3244
3251 <table class=hotspotstable> 3251 <table class=hotspotstable>
3252 <tr> 3252 <tr>
3253 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 3253 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
3254 </tr> 3254 </tr>
3255 <tr> 3255 <tr>
3256 <td>89.7 bits(98)</td> 3256 <td>89.6514 bits (98)</td>
3257 <td>0.0</td> 3257 <td>6.62923e-23</td>
3258 <td>64/74(86%)</td> 3258 <td>64/74 (86%)</td>
3259 <td>0/74(0%)</td> 3259 <td>0/74 (0%)</td>
3260 <td>Plus/Plus</td> 3260 <td>Plus/Plus</td>
3261 </tr> 3261 </tr>
3262 </table> 3262 </table>
3263 3263
3264 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60 3264 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
3306 <div class=legend><div class=graphicrow> 3306 <div class=legend><div class=graphicrow>
3307 <div class=graphicitem style="background-color: black">&lt;40</div> 3307 <div class=graphicitem style="background-color: black">&lt;40</div>
3308 <div class=graphicitem style="background-color: blue">40–50</div> 3308 <div class=graphicitem style="background-color: blue">40–50</div>
3309 <div class=graphicitem style="background-color: green">50–80</div> 3309 <div class=graphicitem style="background-color: green">50–80</div>
3310 <div class=graphicitem style="background-color: magenta">80–200</div> 3310 <div class=graphicitem style="background-color: magenta">80–200</div>
3311 <div class=graphicitem style="background-color: red">200≤</div> 3311 <div class=graphicitem style="background-color: red">≥200</div>
3312 </div></div> 3312 </div></div>
3313 <div style="clear: left"></div> 3313 <div style="clear: left"></div>
3314 3314
3315 <div class=tablewrapper> 3315 <div class=tablewrapper>
3316 3316
3398 <td>89.7</td> 3398 <td>89.7</td>
3399 <td>89.7</td> 3399 <td>89.7</td>
3400 <td>100%</td> 3400 <td>100%</td>
3401 <td>6.629e-23</td> 3401 <td>6.629e-23</td>
3402 <td>86%</td> 3402 <td>86%</td>
3403 <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td> 3403 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td>
3404 </tr> 3404 </tr>
3405 </table> 3405 </table>
3406 3406
3407 </div></div> 3407 </div></div>
3408 </section> 3408 </section>
3415 <div class=grey><div class=white> 3415 <div class=grey><div class=white>
3416 <div class=alignment id=hit56-1> 3416 <div class=alignment id=hit56-1>
3417 3417
3418 <div class=linkheader> 3418 <div class=linkheader>
3419 <div class=right><a href="#description56-1">Descriptions</a></div> 3419 <div class=right><a href="#description56-1">Descriptions</a></div>
3420 <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a> 3420 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a>
3421 </div> 3421 </div>
3422 3422
3423 <div class=title> 3423 <div class=title>
3424 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p> 3424 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
3425 <p class=titleinfo> 3425 <p class=titleinfo>
3426 <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a> 3426 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a>
3427 <span class=b>Length:</span> 4983 3427 <span class=b>Length:</span> 4983
3428 <span class=b>Number of Matches:</span> 1 3428 <span class=b>Number of Matches:</span> 1
3429 </p> 3429 </p>
3430 </div> 3430 </div>
3431 3431
3438 <table class=hotspotstable> 3438 <table class=hotspotstable>
3439 <tr> 3439 <tr>
3440 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th> 3440 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
3441 </tr> 3441 </tr>
3442 <tr> 3442 <tr>
3443 <td>89.7 bits(98)</td> 3443 <td>89.6514 bits (98)</td>
3444 <td>0.0</td> 3444 <td>6.62923e-23</td>
3445 <td>64/74(86%)</td> 3445 <td>64/74 (86%)</td>
3446 <td>0/74(0%)</td> 3446 <td>0/74 (0%)</td>
3447 <td>Plus/Plus</td> 3447 <td>Plus/Plus</td>
3448 </tr> 3448 </tr>
3449 </table> 3449 </table>
3450 3450
3451 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60 3451 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60