Mercurial > repos > jankanis > blast2html
comparison test-data/refresh_test_results.sh @ 98:e780606b7c25
test new command line parameters, fix small bug
author | Jan Kanis <jan.code@jankanis.nl> |
---|---|
date | Mon, 30 Jun 2014 17:51:56 +0200 |
parents | 05500bdd7376 |
children | b3b5ee557170 |
comparison
equal
deleted
inserted
replaced
97:8b3c5d334a84 | 98:e780606b7c25 |
---|---|
2 | 2 |
3 # run this from the directory it exists in to update the test outputs | 3 # run this from the directory it exists in to update the test outputs |
4 | 4 |
5 set -eu | 5 set -eu |
6 | 6 |
7 for i in 1 2 3 4 | 7 "$@" ../blast2html.py -i "blast xml example1.xml" -o "blast xml example1.html" |
8 do | 8 "$@" ../blast2html.py -i "blast xml example2.xml" -o "blast xml example2.html" |
9 "$@" ../blast2html.py -i "blast xml example$i.xml" -o "blast xml example$i.html" | 9 "$@" ../blast2html.py -i "blast xml example3.xml" -o "blast xml example3.html" --genelink-template 'http://example.com/example-genebank?id={fullid}' |
10 done | 10 "$@" ../blast2html.py -i "blast xml example4.xml" -o "blast xml example4.html" --db-config-dir . |
11 |