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comparison test-data/blast xml example4b.html @ 106:ed71448ee154

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author Jan Kanis <jan.code@jankanis.nl>
date Mon, 07 Jul 2014 11:50:50 +0200
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105:b3b5ee557170 106:ed71448ee154
1 <!DOCTYPE html>
2 <html>
3 <head>
4 <meta charset="UTF-8">
5 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
6
7 <title>Blast output</title>
8
9 <style>
10 body {
11 color: #333333;
12 font-family: Arial,Sans-Serif;
13 }
14
15 :link {
16 color: #336699;
17 }
18
19 .right {
20 float: right;
21 }
22
23 /* Galaxy with html sanitization enabled strips the header of this html page. If so, show the user a warning.*/
24 #strip_html_warning {
25 display: none;
26 }
27
28 #content {
29 margin: 0 2em;
30 padding: 0.5em;
31 border: 1px solid #888888;
32 background-color: #d3dff5;
33 }
34
35 h1, h2, h3, h4, h5, h6 {
36 color: #2A6979;
37 font-family: arial,verdana,sans-serif;
38 letter-spacing: -1px;
39 margin: 1.2em 0 0.3em;
40 }
41
42 h1 {
43 border-bottom: 1px solid #CCCCCC;
44 font-size: 150%;
45 padding-bottom: 0.1em;
46 }
47
48 h2 {
49 font-size: 120%;
50 font-weight: bold;
51 }
52
53 h4.darkHeader {
54 color: #4D4D4D;
55 letter-spacing: 0;
56 font-weight: bold;
57 }
58
59 #nodata {
60 font-weight: bold;
61 }
62
63 .index {
64 margin-bottom: 3em;
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67 margin: 1.2em 1.6em;
68 font-weight: bold;
69 font-size: 100%;
70 }
71
72 .headerdata {
73 font-size: 90%;
74 }
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76 font-weight: bold;
77 text-align: right;
78 padding: 0 1em;
79 }
80
81 .grey {
82 background-color: #eeeeee;
83 border: 1px solid #cccccc;
84 padding: 1em;
85 }
86
87 .white {
88 background-color: white;
89 border: 1px solid #cccccc;
90 padding: 1.5em 2%;
91 }
92
93 .graphicrow {
94 clear: left;
95 width: 100%;
96 }
97
98 .graphicitem {
99 float: left;
100 }
101
102
103
104 .graphics .grey {
105 text-align: center;
106 }
107
108 .graphic {
109 background-color: white;
110 border: 2px solid black;
111 padding: 1.5em;
112 margin: auto;
113 }
114
115 .centered, .defline, div.legend, div.tablewrapper {
116 margin-left: auto;
117 margin-right: auto;
118 }
119
120 .defline {
121 background-color: white;
122 border: 1px solid black;
123 margin: .5em auto;
124 padding-left: .2em;
125 padding-right: .2em;
126 max-width: 50em;
127 text-align: left;
128 height: 2.8em;
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152
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155 div.tablewrapper {
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157 min-width: 0px;
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160
161 .scale {
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163 margin: .5em 0;
164 font-weight: bold;
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167 color: red;
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171 margin: .5em 0 .5em 0;
172 color: white;
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178 margin: 0 1px;
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187 .scale .graphicitem:last-child div {
188 margin-right: 0px;
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191 position: absolute;
192 top: 0px;
193 left: 100%;
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199 display: block;
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238 padding: .4em .8em;
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246
247
248
249 .alignments .white {
250 padding: 1.5em 1em;
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252
253 .alignment {
254 border-top: 1px solid black;
255 padding-left: 1em;
256 padding-right: 1em;
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259 div.linkheader {
260 padding-top: .2em;
261 font-size: 85%;
262 color: #14376C;
263 }
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271 .title .hittitle {
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348 footer {
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351 font-size: 70%;
352 margin-top: 1em;
353 }
354 footer :link {
355 color: #5588cc;
356 }
357
358 </style>
359
360 <script type="text/javascript">
361 function toggle_visibility(id) {
362 var e = document.getElementById(id);
363 if(e.style.display != 'block')
364 e.style.display = 'block';
365 else
366 e.style.display = 'none';
367 }
368 </script>
369
370 </head>
371
372
373 <body>
374
375 <div id="strip_html_warning">
376 <!-- This div should be hidden by the header css block. Galaxy
377 strips all css, breaking this page but making this warning
378 visible. This warning contains some ugly old skool tabular html
379 layout that is not stripped. -->
380 <table bgcolor="#FFE5C9"><tr><td><font color="red"><b>
381 <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font>
382 Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.
383 </b></font></td></tr></table>
384 </div>
385
386 <div id=content>
387
388
389 <section class=index>
390 <h1>Queries</h1>
391
392 <div class=indexentry><a href="#match1">
393 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
394 (20 letters, 2 hits)
395 </a></div>
396 <div class=indexentry><a href="#match2">
397 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
398 (20 letters, 0 hits)
399 </a></div>
400 <div class=indexentry><a href="#match3">
401 Query_3: Probe|NOST-Spec_(Genetic_ID)
402 (20 letters, 3 hits)
403 </a></div>
404 <div class=indexentry><a href="#match4">
405 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
406 (24 letters, 0 hits)
407 </a></div>
408 <div class=indexentry><a href="#match5">
409 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
410 (20 letters, 0 hits)
411 </a></div>
412 <div class=indexentry><a href="#match6">
413 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
414 (25 letters, 2 hits)
415 </a></div>
416 <div class=indexentry><a href="#match7">
417 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
418 (74 letters, 2 hits)
419 </a></div>
420
421 </section>
422
423
424 <section class=match id=match1>
425
426 <h1>Nucleotide Sequence (20 letters)</h1>
427
428 <section class=header>
429
430 <table class=headerdata>
431 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
432 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
433 <tr><td class=param>Query length:</td><td>20</td></tr>
434 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
435 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
436 </table>
437
438 </section>
439
440
441 <section class=graphics>
442 <h2>Graphic Summary</h2>
443
444 <div class=grey>
445 <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3>
446
447 <div class=defline id=defline1>
448 Mouse-over to show defline and scores, click to show alignments
449 </div>
450
451 <div class=graphic>
452 <h4 class=darkHeader>Color key for alignment scores</h4>
453 <div class=legend><div class=graphicrow>
454 <div class=graphicitem style="background-color: black">&lt;40</div>
455 <div class=graphicitem style="background-color: blue">40–50</div>
456 <div class=graphicitem style="background-color: green">50–80</div>
457 <div class=graphicitem style="background-color: magenta">80–200</div>
458 <div class=graphicitem style="background-color: red">200≤</div>
459 </div></div>
460 <div style="clear: left"></div>
461
462 <div class=tablewrapper>
463
464 <div class=scale>
465 <div>query:</div>
466 <div class=graphicrow>
467 <div>
468 <div class=graphicitem style="width: 10%">
469 <div>2</div>
470 </div>
471 <div class=graphicitem style="width: 10%">
472 <div>4</div>
473 </div>
474 <div class=graphicitem style="width: 10%">
475 <div>6</div>
476 </div>
477 <div class=graphicitem style="width: 10%">
478 <div>8</div>
479 </div>
480 <div class=graphicitem style="width: 10%">
481 <div>10</div>
482 </div>
483 <div class=graphicitem style="width: 10%">
484 <div>12</div>
485 </div>
486 <div class=graphicitem style="width: 10%">
487 <div>14</div>
488 </div>
489 <div class=graphicitem style="width: 10%">
490 <div>16</div>
491 </div>
492 <div class=graphicitem style="width: 10%">
493 <div>18</div>
494 </div>
495 <div class=graphicitem style="width: 10%">
496 <div>20</div>
497 </div>
498 </div>
499 </div>
500 <div style="clear: left"></div>
501 </div>
502
503 <a class=matchresult
504 href="#hit1-1"
505 onmouseover='document.getElementById("defline1").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
506 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
507 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
508 <div class="matchrow graphicrow">
509 <div class="matchitem graphicitem"
510 style="background-color: black; width: 100%"></div>
511 </div>
512 </a>
513
514 <a class=matchresult
515 href="#hit1-2"
516 onmouseover='document.getElementById("defline1").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
517 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
518 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
519 <div class="matchrow graphicrow">
520 <div class="matchitem graphicitem"
521 style="background-color: black; width: 100%"></div>
522 </div>
523 </a>
524
525 </div>
526 </div>
527 </div>
528 </section>
529
530
531
532 <section class=descriptions>
533 <h2>Descriptions</h2>
534
535 <div class=grey><div class=white>
536 <h4 class=darkHeader>Sequences producing significant alignments:</h4>
537
538 <table class=descriptiontable>
539 <col/><col/><col/><col/><col/><col/><col/>
540 <tr>
541 <th>Description</th>
542 <th>Max score</th>
543 <th>Total score</th>
544 <th>Query cover</th>
545 <th>E value</th>
546 <th>Ident</th>
547 <th>Accession</th>
548 </tr>
549 <tr>
550 <td><div><a href="#hit1-1"
551 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
552 id="description1-1">
553 AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
554 </a></div></td>
555 <td>40.1</td>
556 <td>40.1</td>
557 <td>100%</td>
558 <td>1.513e-07</td>
559 <td>100%</td>
560 <td><a href="http://example.com/example-genebank/AB209952.1/">5</a></td>
561 </tr>
562 <tr>
563 <td><div><a href="#hit1-2"
564 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
565 id="description1-2">
566 DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
567 </a></div></td>
568 <td>40.1</td>
569 <td>40.1</td>
570 <td>100%</td>
571 <td>1.513e-07</td>
572 <td>100%</td>
573 <td><a href="http://example.com/example-genebank/DJ437711/">2</a></td>
574 </tr>
575 </table>
576
577 </div></div>
578 </section>
579
580
581
582 <section class=alignments>
583 <h2>Alignments</h2>
584
585 <div class=grey><div class=white>
586 <div class=alignment id=hit1-1>
587
588 <div class=linkheader>
589 <div class=right><a href="#description1-1">Descriptions</a></div>
590 <a class="linkheader" href="http://example.com/example-genebank/AB209952.1/">Gene Bank</a>
591 </div>
592
593 <div class=title>
594 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
595 <p class=titleinfo>
596 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/AB209952.1/">gnl|BL_ORD_ID|5</a>
597 <span class=b>Length:</span> 2457
598 <span class=b>Number of Matches:</span> 1
599 </p>
600 </div>
601
602
603 <div class=hotspot id=hotspot1-1-1>
604 <p class=range>
605 <span class=range>Range 1: 2119 to 2138</span>
606 </p>
607
608 <table class=hotspotstable>
609 <tr>
610 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
611 </tr>
612 <tr>
613 <td>40.1 bits(20)</td>
614 <td>0.0</td>
615 <td>20/20(100%)</td>
616 <td>0/20(0%)</td>
617 <td>Plus/Plus</td>
618 </tr>
619 </table>
620
621 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
622 ||||||||||||||||||||
623 Subject 2119 AGCGCGCAAACTAGGATAAA 2138</pre>
624 </div>
625
626 </div>
627
628 <div class=alignment id=hit1-2>
629
630 <div class=linkheader>
631 <div class=right><a href="#description1-2">Descriptions</a></div>
632 <a class="linkheader" href="http://example.com/example-genebank/DJ437711/">Gene Bank</a>
633 </div>
634
635 <div class=title>
636 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
637 <p class=titleinfo>
638 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/DJ437711/">gnl|BL_ORD_ID|2</a>
639 <span class=b>Length:</span> 323
640 <span class=b>Number of Matches:</span> 1
641 </p>
642 </div>
643
644
645 <div class=hotspot id=hotspot1-2-1>
646 <p class=range>
647 <span class=range>Range 1: 200 to 219</span>
648 </p>
649
650 <table class=hotspotstable>
651 <tr>
652 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
653 </tr>
654 <tr>
655 <td>40.1 bits(20)</td>
656 <td>0.0</td>
657 <td>20/20(100%)</td>
658 <td>0/20(0%)</td>
659 <td>Plus/Plus</td>
660 </tr>
661 </table>
662
663 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
664 ||||||||||||||||||||
665 Subject 200 AGCGCGCAAACTAGGATAAA 219</pre>
666 </div>
667
668 </div>
669
670 </div></div>
671 </section>
672 </section>
673
674 <section class=match id=match2>
675
676 <h1>Nucleotide Sequence (20 letters)</h1>
677
678 <section class=header>
679
680 <table class=headerdata>
681 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
682 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
683 <tr><td class=param>Query length:</td><td>20</td></tr>
684 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
685 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
686 </table>
687
688 </section>
689
690 <section>
691 <h2>No Hits</h2>
692 <div class=grey>
693 <table class=headerdata>
694 <tr><td class=param>Message:</td><td>No hits found</td></tr>
695 </table>
696 </div>
697 </section>
698 </section>
699
700 <section class=match id=match3>
701
702 <h1>Nucleotide Sequence (20 letters)</h1>
703
704 <section class=header>
705
706 <table class=headerdata>
707 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
708 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
709 <tr><td class=param>Query length:</td><td>20</td></tr>
710 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
711 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
712 </table>
713
714 </section>
715
716
717 <section class=graphics>
718 <h2>Graphic Summary</h2>
719
720 <div class=grey>
721 <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3>
722
723 <div class=defline id=defline3>
724 Mouse-over to show defline and scores, click to show alignments
725 </div>
726
727 <div class=graphic>
728 <h4 class=darkHeader>Color key for alignment scores</h4>
729 <div class=legend><div class=graphicrow>
730 <div class=graphicitem style="background-color: black">&lt;40</div>
731 <div class=graphicitem style="background-color: blue">40–50</div>
732 <div class=graphicitem style="background-color: green">50–80</div>
733 <div class=graphicitem style="background-color: magenta">80–200</div>
734 <div class=graphicitem style="background-color: red">200≤</div>
735 </div></div>
736 <div style="clear: left"></div>
737
738 <div class=tablewrapper>
739
740 <div class=scale>
741 <div>query:</div>
742 <div class=graphicrow>
743 <div>
744 <div class=graphicitem style="width: 10%">
745 <div>2</div>
746 </div>
747 <div class=graphicitem style="width: 10%">
748 <div>4</div>
749 </div>
750 <div class=graphicitem style="width: 10%">
751 <div>6</div>
752 </div>
753 <div class=graphicitem style="width: 10%">
754 <div>8</div>
755 </div>
756 <div class=graphicitem style="width: 10%">
757 <div>10</div>
758 </div>
759 <div class=graphicitem style="width: 10%">
760 <div>12</div>
761 </div>
762 <div class=graphicitem style="width: 10%">
763 <div>14</div>
764 </div>
765 <div class=graphicitem style="width: 10%">
766 <div>16</div>
767 </div>
768 <div class=graphicitem style="width: 10%">
769 <div>18</div>
770 </div>
771 <div class=graphicitem style="width: 10%">
772 <div>20</div>
773 </div>
774 </div>
775 </div>
776 <div style="clear: left"></div>
777 </div>
778
779 <a class=matchresult
780 href="#hit3-1"
781 onmouseover='document.getElementById("defline3").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
782 onmouseout='document.getElementById("defline3").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
783 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
784 <div class="matchrow graphicrow">
785 <div class="matchitem graphicitem"
786 style="background-color: black; width: 100%"></div>
787 </div>
788 </a>
789
790 <a class=matchresult
791 href="#hit3-2"
792 onmouseover='document.getElementById("defline3").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
793 onmouseout='document.getElementById("defline3").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
794 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
795 <div class="matchrow graphicrow">
796 <div class="matchitem graphicitem"
797 style="background-color: black; width: 100%"></div>
798 </div>
799 </a>
800
801 <a class=matchresult
802 href="#hit3-3"
803 onmouseover='document.getElementById("defline3").innerHTML="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3\u0027UTR/plant_junction_region.|-9105899556052450000"'
804 onmouseout='document.getElementById("defline3").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
805 title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000">
806 <div class="matchrow graphicrow">
807 <div class="matchitem graphicitem"
808 style="background-color: transparent; width: 15%"></div>
809 <div class="matchitem graphicitem"
810 style="background-color: black; width: 85%"></div>
811 </div>
812 </a>
813
814 </div>
815 </div>
816 </div>
817 </section>
818
819
820
821 <section class=descriptions>
822 <h2>Descriptions</h2>
823
824 <div class=grey><div class=white>
825 <h4 class=darkHeader>Sequences producing significant alignments:</h4>
826
827 <table class=descriptiontable>
828 <col/><col/><col/><col/><col/><col/><col/>
829 <tr>
830 <th>Description</th>
831 <th>Max score</th>
832 <th>Total score</th>
833 <th>Query cover</th>
834 <th>E value</th>
835 <th>Ident</th>
836 <th>Accession</th>
837 </tr>
838 <tr>
839 <td><div><a href="#hit3-1"
840 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
841 id="description3-1">
842 AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
843 </a></div></td>
844 <td>40.1</td>
845 <td>40.1</td>
846 <td>100%</td>
847 <td>1.513e-07</td>
848 <td>100%</td>
849 <td><a href="http://example.com/example-genebank/AB209952.1/">5</a></td>
850 </tr>
851 <tr>
852 <td><div><a href="#hit3-2"
853 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
854 id="description3-2">
855 DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
856 </a></div></td>
857 <td>40.1</td>
858 <td>40.1</td>
859 <td>100%</td>
860 <td>1.513e-07</td>
861 <td>100%</td>
862 <td><a href="http://example.com/example-genebank/DJ437711/">2</a></td>
863 </tr>
864 <tr>
865 <td><div><a href="#hit3-3"
866 title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000"
867 id="description3-3">
868 AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000
869 </a></div></td>
870 <td>34.2</td>
871 <td>34.2</td>
872 <td>85%</td>
873 <td>9.334e-06</td>
874 <td>100%</td>
875 <td><a href="http://example.com/example-genebank/AJ308515.1/">1</a></td>
876 </tr>
877 </table>
878
879 </div></div>
880 </section>
881
882
883
884 <section class=alignments>
885 <h2>Alignments</h2>
886
887 <div class=grey><div class=white>
888 <div class=alignment id=hit3-1>
889
890 <div class=linkheader>
891 <div class=right><a href="#description3-1">Descriptions</a></div>
892 <a class="linkheader" href="http://example.com/example-genebank/AB209952.1/">Gene Bank</a>
893 </div>
894
895 <div class=title>
896 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
897 <p class=titleinfo>
898 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/AB209952.1/">gnl|BL_ORD_ID|5</a>
899 <span class=b>Length:</span> 2457
900 <span class=b>Number of Matches:</span> 1
901 </p>
902 </div>
903
904
905 <div class=hotspot id=hotspot3-1-1>
906 <p class=range>
907 <span class=range>Range 1: 2143 to 2162</span>
908 </p>
909
910 <table class=hotspotstable>
911 <tr>
912 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
913 </tr>
914 <tr>
915 <td>40.1 bits(20)</td>
916 <td>0.0</td>
917 <td>20/20(100%)</td>
918 <td>0/20(0%)</td>
919 <td>Plus/Plus</td>
920 </tr>
921 </table>
922
923 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
924 ||||||||||||||||||||
925 Subject 2143 CGCGCGCGGTGTCATCTATG 2162</pre>
926 </div>
927
928 </div>
929
930 <div class=alignment id=hit3-2>
931
932 <div class=linkheader>
933 <div class=right><a href="#description3-2">Descriptions</a></div>
934 <a class="linkheader" href="http://example.com/example-genebank/DJ437711/">Gene Bank</a>
935 </div>
936
937 <div class=title>
938 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
939 <p class=titleinfo>
940 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/DJ437711/">gnl|BL_ORD_ID|2</a>
941 <span class=b>Length:</span> 323
942 <span class=b>Number of Matches:</span> 1
943 </p>
944 </div>
945
946
947 <div class=hotspot id=hotspot3-2-1>
948 <p class=range>
949 <span class=range>Range 1: 224 to 243</span>
950 </p>
951
952 <table class=hotspotstable>
953 <tr>
954 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
955 </tr>
956 <tr>
957 <td>40.1 bits(20)</td>
958 <td>0.0</td>
959 <td>20/20(100%)</td>
960 <td>0/20(0%)</td>
961 <td>Plus/Plus</td>
962 </tr>
963 </table>
964
965 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
966 ||||||||||||||||||||
967 Subject 224 CGCGCGCGGTGTCATCTATG 243</pre>
968 </div>
969
970 </div>
971
972 <div class=alignment id=hit3-3>
973
974 <div class=linkheader>
975 <div class=right><a href="#description3-3">Descriptions</a></div>
976 <a class="linkheader" href="http://example.com/example-genebank/AJ308515.1/">Gene Bank</a>
977 </div>
978
979 <div class=title>
980 <p class=hittitle>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000</p>
981 <p class=titleinfo>
982 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/AJ308515.1/">gnl|BL_ORD_ID|1</a>
983 <span class=b>Length:</span> 1045
984 <span class=b>Number of Matches:</span> 1
985 </p>
986 </div>
987
988
989 <div class=hotspot id=hotspot3-3-1>
990 <p class=range>
991 <span class=range>Range 1: 2 to 18</span>
992 </p>
993
994 <table class=hotspotstable>
995 <tr>
996 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
997 </tr>
998 <tr>
999 <td>34.2 bits(17)</td>
1000 <td>0.0</td>
1001 <td>17/17(100%)</td>
1002 <td>0/17(0%)</td>
1003 <td>Plus/Plus</td>
1004 </tr>
1005 </table>
1006
1007 <pre class=alignmentgraphic>Query 4 GCGCGGTGTCATCTATG 20
1008 |||||||||||||||||
1009 Subject 2 GCGCGGTGTCATCTATG 18</pre>
1010 </div>
1011
1012 </div>
1013
1014 </div></div>
1015 </section>
1016 </section>
1017
1018 <section class=match id=match4>
1019
1020 <h1>Nucleotide Sequence (24 letters)</h1>
1021
1022 <section class=header>
1023
1024 <table class=headerdata>
1025 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
1026 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
1027 <tr><td class=param>Query length:</td><td>20</td></tr>
1028 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
1029 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
1030 </table>
1031
1032 </section>
1033
1034 <section>
1035 <h2>No Hits</h2>
1036 <div class=grey>
1037 <table class=headerdata>
1038 <tr><td class=param>Message:</td><td>No hits found</td></tr>
1039 </table>
1040 </div>
1041 </section>
1042 </section>
1043
1044 <section class=match id=match5>
1045
1046 <h1>Nucleotide Sequence (20 letters)</h1>
1047
1048 <section class=header>
1049
1050 <table class=headerdata>
1051 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
1052 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
1053 <tr><td class=param>Query length:</td><td>20</td></tr>
1054 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
1055 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
1056 </table>
1057
1058 </section>
1059
1060 <section>
1061 <h2>No Hits</h2>
1062 <div class=grey>
1063 <table class=headerdata>
1064 <tr><td class=param>Message:</td><td>No hits found</td></tr>
1065 </table>
1066 </div>
1067 </section>
1068 </section>
1069
1070 <section class=match id=match6>
1071
1072 <h1>Nucleotide Sequence (25 letters)</h1>
1073
1074 <section class=header>
1075
1076 <table class=headerdata>
1077 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
1078 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
1079 <tr><td class=param>Query length:</td><td>20</td></tr>
1080 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
1081 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
1082 </table>
1083
1084 </section>
1085
1086
1087 <section class=graphics>
1088 <h2>Graphic Summary</h2>
1089
1090 <div class=grey>
1091 <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3>
1092
1093 <div class=defline id=defline6>
1094 Mouse-over to show defline and scores, click to show alignments
1095 </div>
1096
1097 <div class=graphic>
1098 <h4 class=darkHeader>Color key for alignment scores</h4>
1099 <div class=legend><div class=graphicrow>
1100 <div class=graphicitem style="background-color: black">&lt;40</div>
1101 <div class=graphicitem style="background-color: blue">40–50</div>
1102 <div class=graphicitem style="background-color: green">50–80</div>
1103 <div class=graphicitem style="background-color: magenta">80–200</div>
1104 <div class=graphicitem style="background-color: red">200≤</div>
1105 </div></div>
1106 <div style="clear: left"></div>
1107
1108 <div class=tablewrapper>
1109
1110 <div class=scale>
1111 <div>query:</div>
1112 <div class=graphicrow>
1113 <div>
1114 <div class=graphicitem style="width: 12%">
1115 <div>3</div>
1116 </div>
1117 <div class=graphicitem style="width: 12%">
1118 <div>6</div>
1119 </div>
1120 <div class=graphicitem style="width: 12%">
1121 <div>9</div>
1122 </div>
1123 <div class=graphicitem style="width: 12%">
1124 <div>12</div>
1125 </div>
1126 <div class=graphicitem style="width: 12%">
1127 <div>15</div>
1128 </div>
1129 <div class=graphicitem style="width: 12%">
1130 <div>18</div>
1131 </div>
1132 <div class=graphicitem style="width: 12%">
1133 <div>21</div>
1134 </div>
1135 <div class=graphicitem style="width: 12%">
1136 <div>24</div>
1137 </div>
1138 <div class=graphicitem style="width: 4%">
1139 <div>25</div>
1140 </div>
1141 </div>
1142 </div>
1143 <div style="clear: left"></div>
1144 </div>
1145
1146 <a class=matchresult
1147 href="#hit6-1"
1148 onmouseover='document.getElementById("defline6").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
1149 onmouseout='document.getElementById("defline6").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
1150 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
1151 <div class="matchrow graphicrow">
1152 <div class="matchitem graphicitem"
1153 style="background-color: black; width: 88%"></div>
1154 <div class="matchitem graphicitem"
1155 style="background-color: transparent; width: 12%"></div>
1156 </div>
1157 </a>
1158
1159 <a class=matchresult
1160 href="#hit6-2"
1161 onmouseover='document.getElementById("defline6").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
1162 onmouseout='document.getElementById("defline6").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
1163 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
1164 <div class="matchrow graphicrow">
1165 <div class="matchitem graphicitem"
1166 style="background-color: black; width: 88%"></div>
1167 <div class="matchitem graphicitem"
1168 style="background-color: transparent; width: 12%"></div>
1169 </div>
1170 </a>
1171
1172 </div>
1173 </div>
1174 </div>
1175 </section>
1176
1177
1178
1179 <section class=descriptions>
1180 <h2>Descriptions</h2>
1181
1182 <div class=grey><div class=white>
1183 <h4 class=darkHeader>Sequences producing significant alignments:</h4>
1184
1185 <table class=descriptiontable>
1186 <col/><col/><col/><col/><col/><col/><col/>
1187 <tr>
1188 <th>Description</th>
1189 <th>Max score</th>
1190 <th>Total score</th>
1191 <th>Query cover</th>
1192 <th>E value</th>
1193 <th>Ident</th>
1194 <th>Accession</th>
1195 </tr>
1196 <tr>
1197 <td><div><a href="#hit6-1"
1198 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
1199 id="description6-1">
1200 EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
1201 </a></div></td>
1202 <td>36.2</td>
1203 <td>36.2</td>
1204 <td>88%</td>
1205 <td>3.148e-06</td>
1206 <td>95%</td>
1207 <td><a href="http://example.com/example-genebank/EUG/">7</a></td>
1208 </tr>
1209 <tr>
1210 <td><div><a href="#hit6-2"
1211 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
1212 id="description6-2">
1213 AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
1214 </a></div></td>
1215 <td>36.2</td>
1216 <td>36.2</td>
1217 <td>88%</td>
1218 <td>3.148e-06</td>
1219 <td>95%</td>
1220 <td><a href="http://example.com/example-genebank/AY326434/">6</a></td>
1221 </tr>
1222 </table>
1223
1224 </div></div>
1225 </section>
1226
1227
1228
1229 <section class=alignments>
1230 <h2>Alignments</h2>
1231
1232 <div class=grey><div class=white>
1233 <div class=alignment id=hit6-1>
1234
1235 <div class=linkheader>
1236 <div class=right><a href="#description6-1">Descriptions</a></div>
1237 <a class="linkheader" href="http://example.com/example-genebank/EUG/">Gene Bank</a>
1238 </div>
1239
1240 <div class=title>
1241 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
1242 <p class=titleinfo>
1243 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/EUG/">gnl|BL_ORD_ID|7</a>
1244 <span class=b>Length:</span> 4983
1245 <span class=b>Number of Matches:</span> 1
1246 </p>
1247 </div>
1248
1249
1250 <div class=hotspot id=hotspot6-1-1>
1251 <p class=range>
1252 <span class=range>Range 1: 2344 to 2365</span>
1253 </p>
1254
1255 <table class=hotspotstable>
1256 <tr>
1257 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1258 </tr>
1259 <tr>
1260 <td>36.2 bits(18)</td>
1261 <td>0.0</td>
1262 <td>21/22(95%)</td>
1263 <td>0/22(0%)</td>
1264 <td>Plus/Plus</td>
1265 </tr>
1266 </table>
1267
1268 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCAC 22
1269 |||||||||||||| |||||||
1270 Subject 2344 ACATGAACAGCGCCCTGACCAC 2365</pre>
1271 </div>
1272
1273 </div>
1274
1275 <div class=alignment id=hit6-2>
1276
1277 <div class=linkheader>
1278 <div class=right><a href="#description6-2">Descriptions</a></div>
1279 <a class="linkheader" href="http://example.com/example-genebank/AY326434/">Gene Bank</a>
1280 </div>
1281
1282 <div class=title>
1283 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
1284 <p class=titleinfo>
1285 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/AY326434/">gnl|BL_ORD_ID|6</a>
1286 <span class=b>Length:</span> 4180
1287 <span class=b>Number of Matches:</span> 1
1288 </p>
1289 </div>
1290
1291
1292 <div class=hotspot id=hotspot6-2-1>
1293 <p class=range>
1294 <span class=range>Range 1: 1541 to 1562</span>
1295 </p>
1296
1297 <table class=hotspotstable>
1298 <tr>
1299 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1300 </tr>
1301 <tr>
1302 <td>36.2 bits(18)</td>
1303 <td>0.0</td>
1304 <td>21/22(95%)</td>
1305 <td>0/22(0%)</td>
1306 <td>Plus/Plus</td>
1307 </tr>
1308 </table>
1309
1310 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCAC 22
1311 |||||||||||||| |||||||
1312 Subject 1541 ACATGAACAGCGCCCTGACCAC 1562</pre>
1313 </div>
1314
1315 </div>
1316
1317 </div></div>
1318 </section>
1319 </section>
1320
1321 <section class=match id=match7>
1322
1323 <h1>Nucleotide Sequence (74 letters)</h1>
1324
1325 <section class=header>
1326
1327 <table class=headerdata>
1328 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
1329 <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
1330 <tr><td class=param>Query length:</td><td>20</td></tr>
1331 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
1332 <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr>
1333 </table>
1334
1335 </section>
1336
1337
1338 <section class=graphics>
1339 <h2>Graphic Summary</h2>
1340
1341 <div class=grey>
1342 <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3>
1343
1344 <div class=defline id=defline7>
1345 Mouse-over to show defline and scores, click to show alignments
1346 </div>
1347
1348 <div class=graphic>
1349 <h4 class=darkHeader>Color key for alignment scores</h4>
1350 <div class=legend><div class=graphicrow>
1351 <div class=graphicitem style="background-color: black">&lt;40</div>
1352 <div class=graphicitem style="background-color: blue">40–50</div>
1353 <div class=graphicitem style="background-color: green">50–80</div>
1354 <div class=graphicitem style="background-color: magenta">80–200</div>
1355 <div class=graphicitem style="background-color: red">200≤</div>
1356 </div></div>
1357 <div style="clear: left"></div>
1358
1359 <div class=tablewrapper>
1360
1361 <div class=scale>
1362 <div>query:</div>
1363 <div class=graphicrow>
1364 <div>
1365 <div class=graphicitem style="width: 10.8108108108%">
1366 <div>8</div>
1367 </div>
1368 <div class=graphicitem style="width: 10.8108108108%">
1369 <div>16</div>
1370 </div>
1371 <div class=graphicitem style="width: 10.8108108108%">
1372 <div>24</div>
1373 </div>
1374 <div class=graphicitem style="width: 10.8108108108%">
1375 <div>32</div>
1376 </div>
1377 <div class=graphicitem style="width: 10.8108108108%">
1378 <div>40</div>
1379 </div>
1380 <div class=graphicitem style="width: 10.8108108108%">
1381 <div>48</div>
1382 </div>
1383 <div class=graphicitem style="width: 10.8108108108%">
1384 <div>56</div>
1385 </div>
1386 <div class=graphicitem style="width: 10.8108108108%">
1387 <div>64</div>
1388 </div>
1389 <div class=graphicitem style="width: 10.8108108108%">
1390 <div>72</div>
1391 </div>
1392 <div class=graphicitem style="width: 2.7027027027%">
1393 <div>&nbsp;</div>
1394 <div class=lastlabel>74</div>
1395 </div>
1396 </div>
1397 </div>
1398 <div style="clear: left"></div>
1399 </div>
1400
1401 <a class=matchresult
1402 href="#hit7-1"
1403 onmouseover='document.getElementById("defline7").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
1404 onmouseout='document.getElementById("defline7").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
1405 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
1406 <div class="matchrow graphicrow">
1407 <div class="matchitem graphicitem"
1408 style="background-color: green; width: 100%"></div>
1409 </div>
1410 </a>
1411
1412 <a class=matchresult
1413 href="#hit7-2"
1414 onmouseover='document.getElementById("defline7").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
1415 onmouseout='document.getElementById("defline7").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
1416 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
1417 <div class="matchrow graphicrow">
1418 <div class="matchitem graphicitem"
1419 style="background-color: green; width: 100%"></div>
1420 </div>
1421 </a>
1422
1423 </div>
1424 </div>
1425 </div>
1426 </section>
1427
1428
1429
1430 <section class=descriptions>
1431 <h2>Descriptions</h2>
1432
1433 <div class=grey><div class=white>
1434 <h4 class=darkHeader>Sequences producing significant alignments:</h4>
1435
1436 <table class=descriptiontable>
1437 <col/><col/><col/><col/><col/><col/><col/>
1438 <tr>
1439 <th>Description</th>
1440 <th>Max score</th>
1441 <th>Total score</th>
1442 <th>Query cover</th>
1443 <th>E value</th>
1444 <th>Ident</th>
1445 <th>Accession</th>
1446 </tr>
1447 <tr>
1448 <td><div><a href="#hit7-1"
1449 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
1450 id="description7-1">
1451 EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
1452 </a></div></td>
1453 <td>67.9</td>
1454 <td>67.9</td>
1455 <td>100%</td>
1456 <td>3.564e-15</td>
1457 <td>86%</td>
1458 <td><a href="http://example.com/example-genebank/EUG/">7</a></td>
1459 </tr>
1460 <tr>
1461 <td><div><a href="#hit7-2"
1462 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
1463 id="description7-2">
1464 AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
1465 </a></div></td>
1466 <td>67.9</td>
1467 <td>67.9</td>
1468 <td>100%</td>
1469 <td>3.564e-15</td>
1470 <td>86%</td>
1471 <td><a href="http://example.com/example-genebank/AY326434/">6</a></td>
1472 </tr>
1473 </table>
1474
1475 </div></div>
1476 </section>
1477
1478
1479
1480 <section class=alignments>
1481 <h2>Alignments</h2>
1482
1483 <div class=grey><div class=white>
1484 <div class=alignment id=hit7-1>
1485
1486 <div class=linkheader>
1487 <div class=right><a href="#description7-1">Descriptions</a></div>
1488 <a class="linkheader" href="http://example.com/example-genebank/EUG/">Gene Bank</a>
1489 </div>
1490
1491 <div class=title>
1492 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
1493 <p class=titleinfo>
1494 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/EUG/">gnl|BL_ORD_ID|7</a>
1495 <span class=b>Length:</span> 4983
1496 <span class=b>Number of Matches:</span> 1
1497 </p>
1498 </div>
1499
1500
1501 <div class=hotspot id=hotspot7-1-1>
1502 <p class=range>
1503 <span class=range>Range 1: 2319 to 2392</span>
1504 </p>
1505
1506 <table class=hotspotstable>
1507 <tr>
1508 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1509 </tr>
1510 <tr>
1511 <td>67.9 bits(34)</td>
1512 <td>0.0</td>
1513 <td>64/74(86%)</td>
1514 <td>0/74(0%)</td>
1515 <td>Plus/Plus</td>
1516 </tr>
1517 </table>
1518
1519 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
1520 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
1521 Subject 2319 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 2378</pre>
1522 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
1523 ||||| ||||||||
1524 Subject 2379 TTCGCCGTCCAGAA 2392</pre>
1525 </div>
1526
1527 </div>
1528
1529 <div class=alignment id=hit7-2>
1530
1531 <div class=linkheader>
1532 <div class=right><a href="#description7-2">Descriptions</a></div>
1533 <a class="linkheader" href="http://example.com/example-genebank/AY326434/">Gene Bank</a>
1534 </div>
1535
1536 <div class=title>
1537 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
1538 <p class=titleinfo>
1539 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank/AY326434/">gnl|BL_ORD_ID|6</a>
1540 <span class=b>Length:</span> 4180
1541 <span class=b>Number of Matches:</span> 1
1542 </p>
1543 </div>
1544
1545
1546 <div class=hotspot id=hotspot7-2-1>
1547 <p class=range>
1548 <span class=range>Range 1: 1589 to 1516</span>
1549 </p>
1550
1551 <table class=hotspotstable>
1552 <tr>
1553 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
1554 </tr>
1555 <tr>
1556 <td>67.9 bits(34)</td>
1557 <td>0.0</td>
1558 <td>64/74(86%)</td>
1559 <td>0/74(0%)</td>
1560 <td>Plus/Minus</td>
1561 </tr>
1562 </table>
1563
1564 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
1565 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
1566 Subject 1589 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 1530</pre>
1567 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
1568 ||||| ||||||||
1569 Subject 1529 TTCGCCGTCCAGAA 1516</pre>
1570 </div>
1571
1572 </div>
1573
1574 </div></div>
1575 </section>
1576 </section>
1577
1578 </div>
1579
1580 <footer>
1581 This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
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1585