comparison test-data/blast xml example4.html @ 68:fa8a93bdefd7

fix bug in calculations of alignment end
author Jan Kanis <jan.code@jankanis.nl>
date Wed, 18 Jun 2014 12:25:37 +0200
parents f611cf649c90
children 0ef071bba164
comparison
equal deleted inserted replaced
67:19c48f2ec775 68:fa8a93bdefd7
1538 <td>0/74(0%)</td> 1538 <td>0/74(0%)</td>
1539 <td>Plus/Plus</td> 1539 <td>Plus/Plus</td>
1540 </tr> 1540 </tr>
1541 </table> 1541 </table>
1542 1542
1543 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA 74 1543 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
1544 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| |||||||| 1544 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
1545 Subject 2319 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA 2392</pre> 1545 Subject 2319 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 2378</pre>
1546 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
1547 ||||| ||||||||
1548 Subject 2379 TTCGCCGTCCAGAA 2392</pre>
1546 </div> 1549 </div>
1547 1550
1548 </div> 1551 </div>
1549 1552
1550 <div class=alignment id=hit7-2> 1553 <div class=alignment id=hit7-2>
1583 <td>0/74(0%)</td> 1586 <td>0/74(0%)</td>
1584 <td>Plus/Plus</td> 1587 <td>Plus/Plus</td>
1585 </tr> 1588 </tr>
1586 </table> 1589 </table>
1587 1590
1588 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA 74 1591 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
1589 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| |||||||| 1592 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
1590 Subject 1516 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA 1589</pre> 1593 Subject 1516 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 1575</pre>
1594 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
1595 ||||| ||||||||
1596 Subject 1576 TTCGCCGTCCAGAA 1589</pre>
1591 </div> 1597 </div>
1592 1598
1593 </div> 1599 </div>
1594 1600
1595 </div></div> 1601 </div></div>